ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet123h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X57407.1|TAPPSBP Wheat PsbP mRNA for 23 kDa oxygen evolving ... 113 5e-23
2ref|NM_186247.2| Oryza sativa (japonica cultivar-group), mRNA 76 1e-11
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-11
4dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-11
5dbj|AK104722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-11
6dbj|AK065248.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-11
7gb|AF052203.1|AF052203 Oryza sativa 23 kDa polypeptide of photos... 76 1e-11
8gb|AF022732.1|AF022732 Oryza sativa 23kDa polypeptide of photosy... 76 1e-11
9dbj|D49713.1|RICOSEE2 Rice OSOEE2 gene for 23 kDa polypeptide of... 76 1e-11
10gb|AY103732.1| Zea mays PCO073407 mRNA sequence 46 0.010
11gb|AC164611.3| Mus musculus BAC clone RP23-421C2 from chromosome... 42 0.16
12ref|XM_959280.1| Neurospora crassa OR74A hypothetical protein (N... 40 0.64
13ref|XM_325009.1| Neurospora crassa OR74A hypothetical protein (N... 40 0.64
14emb|AL023693.25|HS32B1 Human DNA sequence from clone RP1-32B1 on... 40 0.64
15gb|AC067751.7| Homo sapiens chromosome 10 clone RP11-357K14, com... 40 0.64
16dbj|AK171278.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 0.64
17dbj|AK155135.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 0.64
18dbj|AK016561.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 0.64
19dbj|AK089459.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 0.64
20gb|AC008160.11|AC008160 Mus musculus, clone 187_J_17, complete s... 40 0.64
21gb|AF073309.1|AF073309 Mus musculus nonsyndromic hearing impairm... 40 0.64
22gb|BC086618.1| Mus musculus cDNA clone IMAGE:5716858, containing... 40 0.64
23gb|BC051962.1| Mus musculus cDNA clone IMAGE:5716858, containing... 40 0.64
24ref|NM_018769.1| Mus musculus deafness, autosomal dominant 5 hom... 40 0.64
25gb|AC153819.5| Mus musculus 6 BAC RP23-445H14 (Roswell Park Canc... 40 0.64
26gb|AC158553.13| Mus musculus chromosome 8, clone RP23-349E13, co... 38 2.5
27gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 38 2.5
28gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome... 38 2.5
29ref|XM_612277.2| PREDICTED: Bos taurus similar to Nonsyndromic h... 38 2.5
30ref|XM_953852.1| Neurospora crassa OR74A hypothetical protein (N... 38 2.5
31ref|XM_330355.1| Neurospora crassa OR74A hypothetical protein (N... 38 2.5
32gb|AC026866.8| Homo sapiens BAC clone RP11-420P20 from 7, comple... 38 2.5
33ref|XM_848863.1| PREDICTED: Canis familiaris similar to Nonsyndr... 38 2.5
34gb|AY194290.1| Equus caballus hearing impairment protein DFNA5 m... 38 2.5
35gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence 38 2.5
36emb|AL591440.7| Mouse DNA sequence from clone RP23-136K12 on chr... 38 2.5
37gb|AC000400.1| Genomic sequence from Mouse 11, complete sequence 38 2.5
38emb|BX323579.20| Zebrafish DNA sequence from clone DKEYP-79E11 i... 38 2.5
39gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome... 38 2.5
40dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 2.5
41gb|AC154682.2| Mus musculus BAC clone RP24-315N18 from chromosom... 38 2.5
42dbj|AB032245.1| Cucumis sativus psbP mRNA for 23kDa polypeptide ... 38 2.5
43emb|AL928977.10| Zebrafish DNA sequence from clone DKEY-24D19 in... 38 2.5
44gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 2.5
45gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, co... 36 9.9
46ref|XM_550300.1| Oryza sativa (japonica cultivar-group), mRNA 36 9.9
47ref|NM_191592.2| Oryza sativa (japonica cultivar-group), mRNA 36 9.9
48gb|AC133517.6| Mus musculus BAC clone RP23-136I9 from chromosome... 36 9.9
49gb|AC166095.3| Mus musculus BAC clone RP24-494O2 from chromosome... 36 9.9
50gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, co... 36 9.9
51ref|NM_197757.1| Oryza sativa (japonica cultivar-group) putative... 36 9.9
52ref|NM_001012340.1| Canis familiaris v-akt murine thymoma viral ... 36 9.9
53ref|NM_004403.1| Homo sapiens deafness, autosomal dominant 5 (DF... 36 9.9
54gb|AY730058.1| Canis familiaris protein kinase B mRNA, partial cds 36 9.9
55gb|BC019689.1| Homo sapiens deafness, autosomal dominant 5, mRNA... 36 9.9
56ref|NM_175565.2| Mus musculus carnitine deficiency-associated ge... 36 9.9
57ref|NM_175833.1| Mus musculus carnitine deficiency-associated ge... 36 9.9
58gb|AC160864.9| Mus musculus 10 BAC RP23-425N2 (Roswell Park Canc... 36 9.9
59ref|XM_849871.1| PREDICTED: Canis familiaris similar to LRP16 pr... 36 9.9
60gb|BC062156.1| Mus musculus carnitine deficiency-associated gene... 36 9.9
61gb|AC118607.12| Mus musculus chromosome 14, clone RP23-479D1, co... 36 9.9
62gb|AC133211.3| Mus musculus BAC clone RP23-36M18 from chromosome... 36 9.9
63gb|AC084384.1| Mus musculus BAC clone RP23-24F24 from 15, comple... 36 9.9
64emb|CR713658.2|CNS0GDLY Tetraodon nigroviridis full-length cDNA 36 9.9
65gb|BC052770.1| Mus musculus carnitine deficiency-associated gene... 36 9.9
66gb|AC146026.2| Pan troglodytes BAC clone RP43-120F17 from 7, com... 36 9.9
67emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in... 36 9.9
68emb|AL445471.13| Human DNA sequence from clone RP11-84D1 on chro... 36 9.9
69emb|AL359175.10| Human DNA sequence from clone RP11-213K14 on ch... 36 9.9
70ref|XM_793494.1| PREDICTED: Strongylocentrotus purpuratus simila... 36 9.9
71gb|BC043169.2| Homo sapiens cDNA clone IMAGE:5287025 36 9.9
72gb|AC078816.16| Homo sapiens 3 BAC RP11-600P18 (Roswell Park Can... 36 9.9
73emb|CR618731.1| full-length cDNA clone CS0DD008YL10 of Neuroblas... 36 9.9
74dbj|AK094714.1| Homo sapiens cDNA FLJ37395 fis, clone BRAMY20272... 36 9.9
75emb|CR608176.1| full-length cDNA clone CS0DI060YG21 of Placenta ... 36 9.9
76emb|CR595348.1| full-length cDNA clone CS0DF002YC09 of Fetal bra... 36 9.9
77gb|AC104825.4| Homo sapiens BAC clone RP11-774O3 from 4, complet... 36 9.9
78gb|AF456925.1|AF411849S2 Homo sapiens USH3 region, partial sequence 36 9.9
79gb|AF414107.1|AF414103S5 Mus musculus carnitine deficiency-assoc... 36 9.9
80ref|XM_684344.1| PREDICTED: Danio rerio similar to myosin heavy ... 36 9.9
81gb|AF320340.1|AF320340 Mus musculus CDV-3B mRNA, complete cds, a... 36 9.9
82gb|AF215660.1|AF215660 Mus musculus CDV-3A mRNA, complete cds; a... 36 9.9
83dbj|AK172053.1| Mus musculus activated spleen cDNA, RIKEN full-l... 36 9.9
84gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 gen... 36 9.9
85gb|BC031362.1| Mus musculus carnitine deficiency-associated gene... 36 9.9
86gb|BC030486.1| Mus musculus carnitine deficiency-associated gene... 36 9.9
87dbj|AK049169.1| Mus musculus ES cells cDNA, RIKEN full-length en... 36 9.9
88gb|BC096479.1| Mus musculus carnitine deficiency-associated gene... 36 9.9
89gb|BC064103.1| Mus musculus carnitine deficiency-associated gene... 36 9.9
90gb|AC055818.9|AC055818 Mus musculus, clone RP23-129C12, complete... 36 9.9
91dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.9
92gb|AC007599.6| Homo sapiens chromosome 16 clone RP11-177N22, com... 36 9.9
93gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, comp... 36 9.9
94gb|AC116317.4| Homo sapiens BAC clone RP11-1406H17 from 4, compl... 36 9.9
95gb|AF238293.1|AF238293 Mus musculus phospholipase C delta (Plcd)... 36 9.9
96dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.9
97dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.9
98gb|AC003093.1|AC003093 Human BAC clone CTA-385F2 from 7p15, comp... 36 9.9
99dbj|AK101660.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 9.9
100dbj|AK073313.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 9.9
101dbj|AK064321.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 9.9
102dbj|AK062282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 9.9
103gb|AY104779.1| Zea mays PCO116203 mRNA sequence 36 9.9
104gb|AF007790.2|AF007790 Homo sapiens ICERE-1 mRNA, complete cds 36 9.9
105gb|AC122747.11| Mus musculus chromosome 9, clone RP23-217J11, co... 36 9.9
106gb|AF073308.1|AF073308 Homo sapiens nonsyndromic hearing impairm... 36 9.9
107gb|AC160539.11| Mus musculus chromosome 15, clone RP24-163H9, co... 36 9.9
108gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 36 9.9
109gb|AY833722.1| Canis familiaris protein kinase B mRNA, partial c... 36 9.9
110gb|AY833721.1| Canis familiaris protein kinase B mRNA, complete ... 36 9.9 
>emb|X57407.1|TAPPSBP Wheat PsbP mRNA for 23 kDa oxygen evolving protein of photosystem
          II
          Length = 967

 Score =  113 bits (57), Expect = 5e-23
 Identities = 57/57 (100%)
 Strand = Plus / Plus

                                                                   
Query: 10 taaacagcagcgagcaatggcgtccacctcctgcttcctccaccagtccaccgcgcg 66
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3  taaacagcagcgagcaatggcgtccacctcctgcttcctccaccagtccaccgcgcg 59
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>ref|NM_186247.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1114

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                 
Query: 23  gcaatggcgtccacctcctgcttcctccaccagtccac 60
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gcaatggcgtccacctcctgcttcctccaccagtccac 144
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                     
Query: 23      gcaatggcgtccacctcctgcttcctccaccagtccac 60
               ||||||||||||||||||||||||||||||||||||||
Sbjct: 2170384 gcaatggcgtccacctcctgcttcctccaccagtccac 2170347
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>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                   
Query: 23    gcaatggcgtccacctcctgcttcctccaccagtccac 60
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 38286 gcaatggcgtccacctcctgcttcctccaccagtccac 38249
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>dbj|AK104722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B02, full
           insert sequence
          Length = 1078

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                 
Query: 23  gcaatggcgtccacctcctgcttcctccaccagtccac 60
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 63  gcaatggcgtccacctcctgcttcctccaccagtccac 100
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>dbj|AK065248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J02, full
           insert sequence
          Length = 1114

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                 
Query: 23  gcaatggcgtccacctcctgcttcctccaccagtccac 60
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gcaatggcgtccacctcctgcttcctccaccagtccac 144
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>gb|AF052203.1|AF052203 Oryza sativa 23 kDa polypeptide of photosystem II mRNA, complete
           cds
          Length = 1107

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                 
Query: 23  gcaatggcgtccacctcctgcttcctccaccagtccac 60
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 82  gcaatggcgtccacctcctgcttcctccaccagtccac 119
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>gb|AF022732.1|AF022732 Oryza sativa 23kDa polypeptide of photosystem II mRNA, complete cds
          Length = 1031

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                 
Query: 23  gcaatggcgtccacctcctgcttcctccaccagtccac 60
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 65  gcaatggcgtccacctcctgcttcctccaccagtccac 102
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>dbj|D49713.1|RICOSEE2 Rice OSOEE2 gene for 23 kDa polypeptide of photosystem II,
          complete cds
          Length = 1008

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                
Query: 23 gcaatggcgtccacctcctgcttcctccaccagtccac 60
          ||||||||||||||||||||||||||||||||||||||
Sbjct: 27 gcaatggcgtccacctcctgcttcctccaccagtccac 64
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>gb|AY103732.1| Zea mays PCO073407 mRNA sequence
          Length = 1083

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 37/41 (90%), Gaps = 3/41 (7%)
 Strand = Plus / Plus

                                                    
Query: 26  atggcgtccacctcctgct---tcctccaccagtccaccgc 63
           |||||||||||||||||||   ||||||||||||| |||||
Sbjct: 70  atggcgtccacctcctgctgcctcctccaccagtcaaccgc 110
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>gb|AC164611.3| Mus musculus BAC clone RP23-421C2 from chromosome 8, complete sequence
          Length = 188068

 Score = 42.1 bits (21), Expect = 0.16
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    tccacctcctgcttcctccac 52
             |||||||||||||||||||||
Sbjct: 81388 tccacctcctgcttcctccac 81408
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>ref|XM_959280.1| Neurospora crassa OR74A hypothetical protein (NCU00830.1) partial
           mRNA
          Length = 765

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  cctgcttcctccaccagtcc 58
           ||||||||||||||||||||
Sbjct: 110 cctgcttcctccaccagtcc 129
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>ref|XM_325009.1| Neurospora crassa OR74A hypothetical protein (NCU00830.1) partial
           mRNA
          Length = 765

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  cctgcttcctccaccagtcc 58
           ||||||||||||||||||||
Sbjct: 110 cctgcttcctccaccagtcc 129
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>emb|AL023693.25|HS32B1 Human DNA sequence from clone RP1-32B1 on chromosome 6q22.33-23.3
              Contains the MYB gene for v-myb myeloblastosis viral
              oncogene homolog (avian), 2 novel genes, the 3' end of a
              novel protein and a CpG island, complete sequence
          Length = 188287

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     cctcctgcttcctccaccag 55
              ||||||||||||||||||||
Sbjct: 167015 cctcctgcttcctccaccag 166996
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>gb|AC067751.7| Homo sapiens chromosome 10 clone RP11-357K14, complete sequence
          Length = 180882

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     tccacctcctgcttcctcca 51
              ||||||||||||||||||||
Sbjct: 171104 tccacctcctgcttcctcca 171085
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>dbj|AK171278.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630324L02
           product:deafness, autosomal dominant 5 homolog (human),
           full insert sequence
          Length = 2133

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  cgtccacctcctgcttcctc 49
           ||||||||||||||||||||
Sbjct: 435 cgtccacctcctgcttcctc 416
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>dbj|AK155135.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630203F04
           product:Nonsyndromic hearing impairment protein 5
           homolog [Mus musculus], full insert sequence
          Length = 4382

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  cgtccacctcctgcttcctc 49
           ||||||||||||||||||||
Sbjct: 415 cgtccacctcctgcttcctc 396
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>dbj|AK016561.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932441K13 product:deafness, autosomal
           dominant 5 homolog (human), full insert sequence
          Length = 2500

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  cgtccacctcctgcttcctc 49
           ||||||||||||||||||||
Sbjct: 804 cgtccacctcctgcttcctc 785
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>dbj|AK089459.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730034N01
           product:deafness, autosomal dominant 5 homolog (human),
           full insert sequence
          Length = 2934

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  cgtccacctcctgcttcctc 49
           ||||||||||||||||||||
Sbjct: 423 cgtccacctcctgcttcctc 404
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>gb|AC008160.11|AC008160 Mus musculus, clone 187_J_17, complete sequence
          Length = 206383

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     cgtccacctcctgcttcctc 49
              ||||||||||||||||||||
Sbjct: 199985 cgtccacctcctgcttcctc 199966
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>gb|AF073309.1|AF073309 Mus musculus nonsyndromic hearing impairment protein (DFNA5) mRNA,
           complete cds
          Length = 2141

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  cgtccacctcctgcttcctc 49
           ||||||||||||||||||||
Sbjct: 437 cgtccacctcctgcttcctc 418
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>gb|BC086618.1| Mus musculus cDNA clone IMAGE:5716858, containing frame-shift
           errors
          Length = 2216

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  cgtccacctcctgcttcctc 49
           ||||||||||||||||||||
Sbjct: 496 cgtccacctcctgcttcctc 477
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>gb|BC051962.1| Mus musculus cDNA clone IMAGE:5716858, containing frame-shift
           errors
          Length = 2216

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  cgtccacctcctgcttcctc 49
           ||||||||||||||||||||
Sbjct: 496 cgtccacctcctgcttcctc 477
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>ref|NM_018769.1| Mus musculus deafness, autosomal dominant 5 homolog (human)
           (Dfna5h), mRNA
          Length = 2141

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  cgtccacctcctgcttcctc 49
           ||||||||||||||||||||
Sbjct: 437 cgtccacctcctgcttcctc 418
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>gb|AC153819.5| Mus musculus 6 BAC RP23-445H14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 199780

 Score = 40.1 bits (20), Expect = 0.64
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    cgtccacctcctgcttcctc 49
             ||||||||||||||||||||
Sbjct: 44052 cgtccacctcctgcttcctc 44033
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>gb|AC158553.13| Mus musculus chromosome 8, clone RP23-349E13, complete sequence
          Length = 213309

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     cttcctccaccagtccacc 61
              |||||||||||||||||||
Sbjct: 115438 cttcctccaccagtccacc 115420
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 19      gcgagcaatggcgtccacctcct 41
               ||||||||||||||||| |||||
Sbjct: 1090933 gcgagcaatggcgtccaactcct 1090911
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>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02
             map C8, complete sequence
          Length = 116304

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 43    cttcctccaccagtccacc 61
             |||||||||||||||||||
Sbjct: 52507 cttcctccaccagtccacc 52525
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>ref|XM_612277.2| PREDICTED: Bos taurus similar to Nonsyndromic hearing impairment
           protein 5 (Inversely correlated with estrogen receptor
           expression 1) (ICERE-1) (LOC533023), mRNA
          Length = 408

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 31  gtccacctcctgcttcctc 49
           |||||||||||||||||||
Sbjct: 372 gtccacctcctgcttcctc 354
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>ref|XM_953852.1| Neurospora crassa OR74A hypothetical protein (NCU09706.1) partial
            mRNA
          Length = 2571

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 34   cacctcctgcttcctccac 52
            |||||||||||||||||||
Sbjct: 2469 cacctcctgcttcctccac 2451
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>ref|XM_330355.1| Neurospora crassa OR74A hypothetical protein (NCU09706.1) partial
            mRNA
          Length = 2571

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 34   cacctcctgcttcctccac 52
            |||||||||||||||||||
Sbjct: 2469 cacctcctgcttcctccac 2451
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>gb|AC026866.8| Homo sapiens BAC clone RP11-420P20 from 7, complete sequence
          Length = 179438

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 40     ctgcttcctccaccagtcc 58
              |||||||||||||||||||
Sbjct: 152615 ctgcttcctccaccagtcc 152633
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>ref|XM_848863.1| PREDICTED: Canis familiaris similar to Nonsyndromic hearing
           impairment protein 5 (Inversely correlated with estrogen
           receptor expression 1) (ICERE-1) (LOC611223), mRNA
          Length = 1512

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 31  gtccacctcctgcttcctc 49
           |||||||||||||||||||
Sbjct: 396 gtccacctcctgcttcctc 378
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>gb|AY194290.1| Equus caballus hearing impairment protein DFNA5 mRNA, complete cds
          Length = 2219

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 31  gtccacctcctgcttcctc 49
           |||||||||||||||||||
Sbjct: 413 gtccacctcctgcttcctc 395
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>gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence
          Length = 270695

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 31     gtccacctcctgcttcctc 49
              |||||||||||||||||||
Sbjct: 216477 gtccacctcctgcttcctc 216459
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>emb|AL591440.7| Mouse DNA sequence from clone RP23-136K12 on chromosome 11 Contains the
              Crk gene for v-crk sarcoma virus CT10 oncogene homolog
              (avian), the Myo1c gene for myosin IC, the Pps gene for
              putative phosphatase, the Pitpn gene for
              phosphatidylinositol transfer protein, a cytochrome c
              oxidase, subunit VIIc (Cox7c) pseudogene, a novel gene, the
              3' end of the gene for a novel protein similar to  solute
              carrier family 43 member 1 Slc43a1 and five CpG islands,
              complete sequence
          Length = 157466

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      gctaaacagcagcgagcaa 26
              |||||||||||||||||||
Sbjct: 150900 gctaaacagcagcgagcaa 150918
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>gb|AC000400.1| Genomic sequence from Mouse 11, complete sequence
          Length = 78748

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     gctaaacagcagcgagcaa 26
             |||||||||||||||||||
Sbjct: 39247 gctaaacagcagcgagcaa 39229
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>emb|BX323579.20| Zebrafish DNA sequence from clone DKEYP-79E11 in linkage group 14,
             complete sequence
          Length = 120579

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    cacctcctgcttcctccac 52
             |||||||||||||||||||
Sbjct: 56110 cacctcctgcttcctccac 56128
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>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0014J14, complete sequence
          Length = 191397

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 43    cttcctccaccagtccacc 61
             |||||||||||||||||||
Sbjct: 21247 cttcctccaccagtccacc 21265
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 43      cttcctccaccagtccacc 61
               |||||||||||||||||||
Sbjct: 7195889 cttcctccaccagtccacc 7195907



 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 48       tccaccagtccaccgcgc 65
                ||||||||||||||||||
Sbjct: 21672523 tccaccagtccaccgcgc 21672506
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>gb|AC154682.2| Mus musculus BAC clone RP24-315N18 from chromosome 14, complete sequence
          Length = 171851

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     gtccacctcctgcttcctc 49
              |||||||||||||||||||
Sbjct: 150047 gtccacctcctgcttcctc 150065
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>dbj|AB032245.1| Cucumis sativus psbP mRNA for 23kDa polypeptide of the
          oxygen-evolving complex of photosystem II, complete cds
          Length = 1023

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                         
Query: 24 caatggcgtccacctcctgcttcctccacca 54
          ||||||| ||||||||||| ||||| |||||
Sbjct: 13 caatggcttccacctcctgtttccttcacca 43
to top
>emb|AL928977.10| Zebrafish DNA sequence from clone DKEY-24D19 in linkage group 20,
             complete sequence
          Length = 165014

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    tgcttcctccaccagtcca 59
             |||||||||||||||||||
Sbjct: 30123 tgcttcctccaccagtcca 30141
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 43      cttcctccaccagtccacc 61
               |||||||||||||||||||
Sbjct: 7199185 cttcctccaccagtccacc 7199203



 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 48       tccaccagtccaccgcgc 65
                ||||||||||||||||||
Sbjct: 21684186 tccaccagtccaccgcgc 21684169
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>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence
          Length = 190298

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 32     tccacctcctgcttcctc 49
              ||||||||||||||||||
Sbjct: 136183 tccacctcctgcttcctc 136166
to top
>ref|XM_550300.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1389

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 48  tccaccagtccaccgcgc 65
           ||||||||||||||||||
Sbjct: 855 tccaccagtccaccgcgc 838
to top
>ref|NM_191592.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1677

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 48   tccaccagtccaccgcgc 65
            ||||||||||||||||||
Sbjct: 1145 tccaccagtccaccgcgc 1128
to top
>gb|AC133517.6| Mus musculus BAC clone RP23-136I9 from chromosome 14, complete sequence
          Length = 196833

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 27    tggcgtccacctcctgcttcct 48
             |||| |||||||||||||||||
Sbjct: 45583 tggcctccacctcctgcttcct 45562
to top
>gb|AC166095.3| Mus musculus BAC clone RP24-494O2 from chromosome 14, complete sequence
          Length = 155918

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 27     tggcgtccacctcctgcttcct 48
              |||| |||||||||||||||||
Sbjct: 102712 tggcctccacctcctgcttcct 102691
to top
>gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, complete sequence
          Length = 206302

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 32     tccacctcctgcttcctc 49
              ||||||||||||||||||
Sbjct: 149055 tccacctcctgcttcctc 149072
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>ref|NM_197757.1| Oryza sativa (japonica cultivar-group) putative protein kinase
            (OSJNBb0089A17.15), mRNA
          Length = 1956

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 48   tccaccagtccaccgcgc 65
            ||||||||||||||||||
Sbjct: 1492 tccaccagtccaccgcgc 1475
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>ref|NM_001012340.1| Canis familiaris v-akt murine thymoma viral oncogene homolog 2
           (AKT2), mRNA
          Length = 1260

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 49  ccaccagtccaccgcgcg 66
           ||||||||||||||||||
Sbjct: 816 ccaccagtccaccgcgcg 799
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>ref|NM_004403.1| Homo sapiens deafness, autosomal dominant 5 (DFNA5), mRNA
          Length = 2230

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 32  tccacctcctgcttcctc 49
           ||||||||||||||||||
Sbjct: 428 tccacctcctgcttcctc 411
to top
>gb|AY730058.1| Canis familiaris protein kinase B mRNA, partial cds
          Length = 196

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 49  ccaccagtccaccgcgcg 66
           ||||||||||||||||||
Sbjct: 171 ccaccagtccaccgcgcg 154
to top
>gb|BC019689.1| Homo sapiens deafness, autosomal dominant 5, mRNA (cDNA clone
          IMAGE:4412963), partial cds
          Length = 1847

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 32 tccacctcctgcttcctc 49
          ||||||||||||||||||
Sbjct: 41 tccacctcctgcttcctc 24
to top
>ref|NM_175565.2| Mus musculus carnitine deficiency-associated gene expressed in
            ventricle 3 (Cdv3), transcript variant CDV3A, mRNA
          Length = 3811

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 3331 tggcctccacctcctgcttcct 3310
to top
>ref|NM_175833.1| Mus musculus carnitine deficiency-associated gene expressed in
            ventricle 3 (Cdv3), transcript variant CDV3B, mRNA
          Length = 3100

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 2620 tggcctccacctcctgcttcct 2599
to top
>gb|AC160864.9| Mus musculus 10 BAC RP23-425N2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 190336

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 39    cctgcttcctccaccagt 56
             ||||||||||||||||||
Sbjct: 76558 cctgcttcctccaccagt 76541
to top
>ref|XM_849871.1| PREDICTED: Canis familiaris similar to LRP16 protein (LOC612142),
           mRNA
          Length = 1271

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 24  caatggcgtccacctcctgctt 45
           ||||||||||||||||| ||||
Sbjct: 639 caatggcgtccacctccagctt 618
to top
>gb|BC062156.1| Mus musculus carnitine deficiency-associated gene expressed in
            ventricle 3, mRNA (cDNA clone MGC:70054 IMAGE:6507616),
            complete cds
          Length = 3214

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 2708 tggcctccacctcctgcttcct 2687
to top
>gb|AC118607.12| Mus musculus chromosome 14, clone RP23-479D1, complete sequence
          Length = 218552

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 40     ctgcttcctccaccagtc 57
              ||||||||||||||||||
Sbjct: 118036 ctgcttcctccaccagtc 118019
to top
>gb|AC133211.3| Mus musculus BAC clone RP23-36M18 from chromosome 12, complete sequence
          Length = 238126

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 37    ctcctgcttcctccacca 54
             ||||||||||||||||||
Sbjct: 26908 ctcctgcttcctccacca 26891
to top
>gb|AC084384.1| Mus musculus BAC clone RP23-24F24 from 15, complete sequence
          Length = 208833

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 32     tccacctcctgcttcctc 49
              ||||||||||||||||||
Sbjct: 174330 tccacctcctgcttcctc 174313
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>emb|CR713658.2|CNS0GDLY Tetraodon nigroviridis full-length cDNA
          Length = 739

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 28 ggcgtccacctcctgctt 45
          ||||||||||||||||||
Sbjct: 4  ggcgtccacctcctgctt 21
to top
>gb|BC052770.1| Mus musculus carnitine deficiency-associated gene expressed in
            ventricle 3, mRNA (cDNA clone MGC:56840 IMAGE:6306557),
            complete cds
          Length = 3328

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 2727 tggcctccacctcctgcttcct 2706
to top
>gb|AC146026.2| Pan troglodytes BAC clone RP43-120F17 from 7, complete sequence
          Length = 169511

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 32     tccacctcctgcttcctc 49
              ||||||||||||||||||
Sbjct: 116682 tccacctcctgcttcctc 116665
to top
>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5,
             complete sequence
          Length = 144909

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 10    taaacagcagcgagcaat 27
             ||||||||||||||||||
Sbjct: 67642 taaacagcagcgagcaat 67625
to top
>emb|AL445471.13| Human DNA sequence from clone RP11-84D1 on chromosome 1 Contains the
            5' end of the RUNX3 gene for runt-related transcription
            factor 3 and a novel gene, complete sequence
          Length = 10805

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 38   tcctgcttcctccaccag 55
            ||||||||||||||||||
Sbjct: 9912 tcctgcttcctccaccag 9895
to top
>emb|AL359175.10| Human DNA sequence from clone RP11-213K14 on chromosome 10 Contains part
              of a variant of the NEBL gene for the nebulette protein
              (actin-binding Z-disc protein) and an eukaryotic
              translation initiation factor 4B (EIF4B)(EIF-4B)
              pseudogene, complete sequence
          Length = 155290

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 41     tgcttcctccaccagtcc 58
              ||||||||||||||||||
Sbjct: 129096 tgcttcctccaccagtcc 129079
to top
>ref|XM_793494.1| PREDICTED: Strongylocentrotus purpuratus similar to heterogeneous
            nuclear ribonucleoprotein H1 (LOC594043), mRNA
          Length = 2333

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 31   gtccacctcctgcttcct 48
            ||||||||||||||||||
Sbjct: 1496 gtccacctcctgcttcct 1513
to top
>gb|BC043169.2| Homo sapiens cDNA clone IMAGE:5287025
          Length = 2460

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 38  tcctgcttcctccaccag 55
           ||||||||||||||||||
Sbjct: 865 tcctgcttcctccaccag 882
to top
>gb|AC078816.16| Homo sapiens 3 BAC RP11-600P18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 183861

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 36     cctcctgcttcctccacc 53
              ||||||||||||||||||
Sbjct: 104498 cctcctgcttcctccacc 104515
to top
>emb|CR618731.1| full-length cDNA clone CS0DD008YL10 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1502

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 32  tccacctcctgcttcctc 49
           ||||||||||||||||||
Sbjct: 391 tccacctcctgcttcctc 374
to top
>dbj|AK094714.1| Homo sapiens cDNA FLJ37395 fis, clone BRAMY2027242, highly similar to
            Homo sapiens nonsyndromic hearing impairment protein
            (DFNA5) mRNA
          Length = 2820

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 32   tccacctcctgcttcctc 49
            ||||||||||||||||||
Sbjct: 1032 tccacctcctgcttcctc 1015
to top
>emb|CR608176.1| full-length cDNA clone CS0DI060YG21 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1641

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 32  tccacctcctgcttcctc 49
           ||||||||||||||||||
Sbjct: 391 tccacctcctgcttcctc 374
to top
>emb|CR595348.1| full-length cDNA clone CS0DF002YC09 of Fetal brain of Homo sapiens
           (human)
          Length = 2005

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 32  tccacctcctgcttcctc 49
           ||||||||||||||||||
Sbjct: 240 tccacctcctgcttcctc 223
to top
>gb|AC104825.4| Homo sapiens BAC clone RP11-774O3 from 4, complete sequence
          Length = 134369

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 38    tcctgcttcctccaccag 55
             ||||||||||||||||||
Sbjct: 21535 tcctgcttcctccaccag 21552
to top
>gb|AF456925.1|AF411849S2 Homo sapiens USH3 region, partial sequence
          Length = 8565

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 36   cctcctgcttcctccacc 53
            ||||||||||||||||||
Sbjct: 5146 cctcctgcttcctccacc 5163
to top
>gb|AF414107.1|AF414103S5 Mus musculus carnitine deficiency-associated proteins CDV3A and CDV3B
            (Cdv3) gene, alternative exons 5 and complete cds,
            alternatively spliced
          Length = 2946

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 2466 tggcctccacctcctgcttcct 2445
to top
>ref|XM_684344.1| PREDICTED: Danio rerio similar to myosin heavy chain (LOC560945),
            mRNA
          Length = 5847

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 34   cacctcctgcttcctcca 51
            ||||||||||||||||||
Sbjct: 3514 cacctcctgcttcctcca 3497
to top
>gb|AF320340.1|AF320340 Mus musculus CDV-3B mRNA, complete cds, alternatively spliced
          Length = 3100

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 2620 tggcctccacctcctgcttcct 2599
to top
>gb|AF215660.1|AF215660 Mus musculus CDV-3A mRNA, complete cds; alternatively spliced
          Length = 3811

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 3331 tggcctccacctcctgcttcct 3310
to top
>dbj|AK172053.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830033F08 product:unclassifiable, full
            insert sequence
          Length = 3767

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 3283 tggcctccacctcctgcttcct 3262
to top
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete
              sequence
          Length = 132927

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 48     tccaccagtccaccgcgc 65
              ||||||||||||||||||
Sbjct: 104427 tccaccagtccaccgcgc 104410
to top
>gb|BC031362.1| Mus musculus carnitine deficiency-associated gene expressed in
            ventricle 3, mRNA (cDNA clone IMAGE:5355368), partial cds
          Length = 3154

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 2655 tggcctccacctcctgcttcct 2634
to top
>gb|BC030486.1| Mus musculus carnitine deficiency-associated gene expressed in
           ventricle 3, mRNA (cDNA clone IMAGE:5374445), partial
           cds
          Length = 1312

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 27  tggcgtccacctcctgcttcct 48
           |||| |||||||||||||||||
Sbjct: 812 tggcctccacctcctgcttcct 791
to top
>dbj|AK049169.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
            clone:C330009P16 product:inferred: Mus musculus CDV-3B
            mRNA, complete cds, alternatively spliced, full insert
            sequence
          Length = 2310

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 1826 tggcctccacctcctgcttcct 1805
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>gb|BC096479.1| Mus musculus carnitine deficiency-associated gene expressed in
            ventricle 3, mRNA (cDNA clone MGC:106206 IMAGE:4979176),
            complete cds
          Length = 3228

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   tggcgtccacctcctgcttcct 48
            |||| |||||||||||||||||
Sbjct: 2714 tggcctccacctcctgcttcct 2693
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>gb|BC064103.1| Mus musculus carnitine deficiency-associated gene expressed in
           ventricle 3, mRNA (cDNA clone IMAGE:1430233)
          Length = 1377

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 27  tggcgtccacctcctgcttcct 48
           |||| |||||||||||||||||
Sbjct: 875 tggcctccacctcctgcttcct 854
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>gb|AC055818.9|AC055818 Mus musculus, clone RP23-129C12, complete sequence
          Length = 237678

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 36     cctcctgcttcctccacc 53
              ||||||||||||||||||
Sbjct: 136316 cctcctgcttcctccacc 136299
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                      
Query: 40       ctgcttcctccaccagtccacc 61
                ||||||||||||||||| ||||
Sbjct: 12892365 ctgcttcctccaccagtgcacc 12892386



 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 48      tccaccagtccaccgcgc 65
               ||||||||||||||||||
Sbjct: 3834955 tccaccagtccaccgcgc 3834972
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>gb|AC007599.6| Homo sapiens chromosome 16 clone RP11-177N22, complete sequence
          Length = 182101

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 41   tgcttcctccaccagtcc 58
            ||||||||||||||||||
Sbjct: 5574 tgcttcctccaccagtcc 5557
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>gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, complete sequence
          Length = 150962

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 41     tgcttcctccaccagtcc 58
              ||||||||||||||||||
Sbjct: 144966 tgcttcctccaccagtcc 144949
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>gb|AC116317.4| Homo sapiens BAC clone RP11-1406H17 from 4, complete sequence
          Length = 160943

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 31     gtccacctcctgcttcct 48
              ||||||||||||||||||
Sbjct: 135712 gtccacctcctgcttcct 135729
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>gb|AF238293.1|AF238293 Mus musculus phospholipase C delta (Plcd) gene, promoter sequence and
            partial cds
          Length = 2088

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 36   cctcctgcttcctccacc 53
            ||||||||||||||||||
Sbjct: 1796 cctcctgcttcctccacc 1779
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>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0089K24
          Length = 154137

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 48     tccaccagtccaccgcgc 65
              ||||||||||||||||||
Sbjct: 108497 tccaccagtccaccgcgc 108514
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>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1140D12
          Length = 139301

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 40    ctgcttcctccaccagtccacc 61
             ||||||||||||||||| ||||
Sbjct: 43806 ctgcttcctccaccagtgcacc 43827
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>gb|AC003093.1|AC003093 Human BAC clone CTA-385F2 from 7p15, complete sequence
          Length = 122000

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 32    tccacctcctgcttcctc 49
             ||||||||||||||||||
Sbjct: 51037 tccacctcctgcttcctc 51054
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>dbj|AK101660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057J01, full
            insert sequence
          Length = 1975

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 48   tccaccagtccaccgcgc 65
            ||||||||||||||||||
Sbjct: 1149 tccaccagtccaccgcgc 1132
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>dbj|AK073313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027F03, full
           insert sequence
          Length = 1389

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 48  tccaccagtccaccgcgc 65
           ||||||||||||||||||
Sbjct: 855 tccaccagtccaccgcgc 838
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>dbj|AK064321.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D10, full
           insert sequence
          Length = 1456

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 48  tccaccagtccaccgcgc 65
           ||||||||||||||||||
Sbjct: 818 tccaccagtccaccgcgc 801
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>dbj|AK062282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C06, full
            insert sequence
          Length = 1677

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 48   tccaccagtccaccgcgc 65
            ||||||||||||||||||
Sbjct: 1145 tccaccagtccaccgcgc 1128
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>gb|AY104779.1| Zea mays PCO116203 mRNA sequence
          Length = 1131

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 44 ttcctccaccagtccacc 61
          ||||||||||||||||||
Sbjct: 53 ttcctccaccagtccacc 70
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>gb|AF007790.2|AF007790 Homo sapiens ICERE-1 mRNA, complete cds
          Length = 2167

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 32  tccacctcctgcttcctc 49
           ||||||||||||||||||
Sbjct: 359 tccacctcctgcttcctc 342
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>gb|AC122747.11| Mus musculus chromosome 9, clone RP23-217J11, complete sequence
          Length = 195755

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 27     tggcgtccacctcctgcttcct 48
              |||| |||||||||||||||||
Sbjct: 134873 tggcctccacctcctgcttcct 134894
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>gb|AF073308.1|AF073308 Homo sapiens nonsyndromic hearing impairment protein (DFNA5) mRNA,
           complete cds
          Length = 2230

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 32  tccacctcctgcttcctc 49
           ||||||||||||||||||
Sbjct: 428 tccacctcctgcttcctc 411
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>gb|AC160539.11| Mus musculus chromosome 15, clone RP24-163H9, complete sequence
          Length = 151529

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 32    tccacctcctgcttcctc 49
             ||||||||||||||||||
Sbjct: 17003 tccacctcctgcttcctc 16986
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 23      gcaatggcgtccacctcc 40
               ||||||||||||||||||
Sbjct: 1281689 gcaatggcgtccacctcc 1281672
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>gb|AY833722.1| Canis familiaris protein kinase B mRNA, partial cds, alternatively
           spliced
          Length = 1172

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 49  ccaccagtccaccgcgcg 66
           ||||||||||||||||||
Sbjct: 816 ccaccagtccaccgcgcg 799
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>gb|AY833721.1| Canis familiaris protein kinase B mRNA, complete cds, alternatively
           spliced
          Length = 1260

 Score = 36.2 bits (18), Expect = 9.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 49  ccaccagtccaccgcgcg 66
           ||||||||||||||||||
Sbjct: 816 ccaccagtccaccgcgcg 799


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 650,017
Number of Sequences: 3902068
Number of extensions: 650017
Number of successful extensions: 47524
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47264
Number of HSP's gapped (non-prelim): 259
length of query: 66
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 45
effective length of database: 17,151,101,840
effective search space: 771799582800
effective search space used: 771799582800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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