>PER_ACEME (P12347) Period clock protein (p230)|
          Length = 174

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 106 GWTVGSATGRGMRVGIGSGWIWAGVIFLIRRRCR 5
           G   G+ TG G   G G+G IW G +      C+
Sbjct: 119 GTGTGTGTGTGTGTGTGTGTIWEGELVFFYAECK 152

>MMP9_HUMAN (P14780) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)|
           (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase)
           (Gelatinase B) (GELB) [Contains: 67 kDa matrix
           metalloproteinase-9; 82 kDa matrix metalloproteinase-9]
          Length = 707

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +3

Query: 21  IRKITPAQIQPDPIP--TRIPRPVADPTVHPTAP 116
           IR +   + +P+P P  T  P+P A PTV PT P
Sbjct: 439 IRHLYGPRPEPEPRPPTTTTPQPTAPPTVCPTGP 472

>MUTS_THIDA (Q3SJP0) DNA mismatch repair protein mutS|
          Length = 850

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +3

Query: 3   HRHRRRIRKITPAQIQPDP----IPTRIPRPVADPTVHP 107
           H  RRR+R++  AQ+QP P        +PR  A P  HP
Sbjct: 781 HAARRRLRELEDAQLQPGPQGDLFAAHLPRDEAPP--HP 817

>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog|
          Length = 328

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 30  ITPAQIQPDPIPTRIPRPVADPTVHPTA 113
           + P Q QP P P++ P+PVA P   P+A
Sbjct: 137 VQPPQQQPAP-PSQAPQPVAQPAPPPSA 163

>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog|
          Length = 328

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 30  ITPAQIQPDPIPTRIPRPVADPTVHPTA 113
           + P Q QP P P++ P+PVA P   P+A
Sbjct: 137 VQPPQQQPAP-PSQAPQPVAQPAPPPSA 163

>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2|
          Length = 1009

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 39  AQIQPDPIPTRIPRPVADPTVHPTAP 116
           A + P P   + PRPVA   V P+AP
Sbjct: 162 APVTPPPAAPQAPRPVAQAPVAPSAP 187

>HMW1_MYCPN (Q50365) Cytadherence high molecular weight protein 1 (Cytadherence|
           accessory protein 1)
          Length = 1018

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 33  TPAQIQPDPIPTRIPRPVADPT 98
           TP ++QP+P+   +   VA+PT
Sbjct: 446 TPVEVQPEPVVETVQEAVAEPT 467

>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase A) (Cellulase A)
          Length = 1742

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +3

Query: 30  ITPAQIQPDPIPTRIPRPVADPTVHPT 110
           +TP    P P PT  P P   PTV PT
Sbjct: 649 VTPT---PTPTPTATPTPTPTPTVTPT 672

>SPKC_SYNY3 (P74745) Serine/threonine-protein kinase C (EC 2.7.11.1)|
          Length = 535

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 30  ITPAQIQPDPIPTRIPRPVADPTVHPT 110
           +TPA + P P P+  P+P   P + PT
Sbjct: 471 VTPAPV-PKPSPSPTPKPTVPPQISPT 496


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,636,581
Number of Sequences: 219361
Number of extensions: 217425
Number of successful extensions: 1842
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 80,573,946
effective HSP length: 38
effective length of database: 72,238,228
effective search space used: 1733717472
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)