ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet123e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
2dbj|AK065358.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
3dbj|AK059056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
4ref|NM_191551.1| Oryza sativa (japonica cultivar-group), predic... 149 7e-33
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
6dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
7dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
8emb|AL691513.13| Mouse DNA sequence from clone RP23-451C8 on chr... 44 0.30
9gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, co... 42 1.2
10gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome... 42 1.2
11gb|AC163394.4| Mus musculus chromosome 15, clone RP24-241D13, co... 42 1.2
12gb|AC102847.3| Mus musculus, clone RP24-406I1, complete sequence 42 1.2
13emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 42 1.2
14gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence 42 1.2
15gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, com... 42 1.2
16dbj|AK022038.1| Homo sapiens cDNA FLJ11976 fis, clone HEMBB1001253 42 1.2
17gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, com... 42 1.2
18gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome ... 40 4.7
19emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on ch... 40 4.7
20emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 40 4.7
21gb|AC107623.2| Homo sapiens chromosome 3 clone RP11-648C16, comp... 40 4.7
22gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, comp... 40 4.7
23gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Canc... 40 4.7
24gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Can... 40 4.7
25gb|AC124944.8| Homo sapiens 3 BAC RP11-352G9 (Roswell Park Cance... 40 4.7
26gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy... 40 4.7
27gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11... 40 4.7
28gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complet... 40 4.7
29gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complet... 40 4.7 
>dbj|AK106043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E03, full
           insert sequence
          Length = 1617

 Score =  151 bits (76), Expect = 2e-33
 Identities = 207/250 (82%), Gaps = 3/250 (1%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 161
           |||||||||||||||| ||||   | || | |||| ||||||  ||||||| || |||||
Sbjct: 71  ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 127

                                                                       
Query: 162 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 221
           ||||||||| |||||  |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 128 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 187

                                                                       
Query: 222 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 281
            || ||||| |||||||| || |||  |||   || ||||||||||||||||||||||||
Sbjct: 188 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 247

                                                                       
Query: 282 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 341
           |  |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 248 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 307

                     
Query: 342 gggcaagggt 351
            |||||||||
Sbjct: 308 aggcaagggt 317
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>dbj|AK065358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013011A15, full
           insert sequence
          Length = 1618

 Score =  151 bits (76), Expect = 2e-33
 Identities = 207/250 (82%), Gaps = 3/250 (1%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 161
           |||||||||||||||| ||||   | || | |||| ||||||  ||||||| || |||||
Sbjct: 72  ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 128

                                                                       
Query: 162 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 221
           ||||||||| |||||  |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 129 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 188

                                                                       
Query: 222 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 281
            || ||||| |||||||| || |||  |||   || ||||||||||||||||||||||||
Sbjct: 189 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 248

                                                                       
Query: 282 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 341
           |  |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 249 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 308

                     
Query: 342 gggcaagggt 351
            |||||||||
Sbjct: 309 aggcaagggt 318
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>dbj|AK059056.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F04, full
           insert sequence
          Length = 1616

 Score =  151 bits (76), Expect = 2e-33
 Identities = 207/250 (82%), Gaps = 3/250 (1%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 161
           |||||||||||||||| ||||   | || | |||| ||||||  ||||||| || |||||
Sbjct: 63  ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 119

                                                                       
Query: 162 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 221
           ||||||||| |||||  |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 120 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 179

                                                                       
Query: 222 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 281
            || ||||| |||||||| || |||  |||   || ||||||||||||||||||||||||
Sbjct: 180 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 239

                                                                       
Query: 282 ctcgggcggcgtccatgtcgacgcgggccatgggatgcctgggggcacgacggtcgatgt 341
           |  |||||||||||||||||||||||| || || | ||| || ||||| || || |||||
Sbjct: 240 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 299

                     
Query: 342 gggcaagggt 351
            |||||||||
Sbjct: 300 aggcaagggt 309
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>ref|NM_191551.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1290

 Score =  149 bits (75), Expect = 7e-33
 Identities = 183/219 (83%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttgccttcctactgatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatac 192
           |||| ||||||  ||||||| || |||||||||||||| |||||  |||||| |||||||
Sbjct: 25  cttggcttcctgttgatcgcttcagtaggaagccatgccgctcggactccggagcaatac 84

                                                                       
Query: 193 tgggagtctgctcttcccaacactcccatgccaagctccctctctcaactcctcgacacg 252
           ||| | || |||||||||||| ||||||| || ||||| |||||||| || |||  ||| 
Sbjct: 85  tggaaatcagctcttcccaactctcccatcccgagctcgctctctcagcttctcagcact 144

                                                                       
Query: 253 caagccggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccat 312
             || |||||||||||||||||||||||||  |||||||||||||||||||||||| || 
Sbjct: 145 gcaggcggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcac 204

                                                  
Query: 313 gggatgcctgggggcacgacggtcgatgtgggcaagggt 351
           || | ||| || ||||| || || ||||| |||||||||
Sbjct: 205 ggcaagcccggcggcacaaccgttgatgtaggcaagggt 243
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 82/94 (87%)
 Strand = Plus / Plus

                                                                            
Query: 258      cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 317
                |||||||||||||||||||||||||  |||||||||||||||||||||||| || || | 
Sbjct: 30584378 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 30584437

                                                  
Query: 318      gcctgggggcacgacggtcgatgtgggcaagggt 351
                ||| || ||||| || || ||||| |||||||||
Sbjct: 30584438 gcccggcggcacaaccgttgatgtaggcaagggt 30584471



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                            
Query: 147      gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 206
                |||||| || |||||||||||||| |||||  |||||| |||||||||| | || |||||
Sbjct: 30583798 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 30583857

                                                 
Query: 207      tcccaacactcccatgccaagctccctctctca 239
                ||||||| ||||||| || ||||| ||||||||
Sbjct: 30583858 tcccaactctcccatcccgagctcgctctctca 30583890
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>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0036G09
          Length = 124118

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 82/94 (87%)
 Strand = Plus / Plus

                                                                         
Query: 258   cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 317
             |||||||||||||||||||||||||  |||||||||||||||||||||||| || || | 
Sbjct: 66982 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 67041

                                               
Query: 318   gcctgggggcacgacggtcgatgtgggcaagggt 351
             ||| || ||||| || || ||||| |||||||||
Sbjct: 67042 gcccggcggcacaaccgttgatgtaggcaagggt 67075



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                         
Query: 147   gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 206
             |||||| || |||||||||||||| |||||  |||||| |||||||||| | || |||||
Sbjct: 66402 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 66461

                                              
Query: 207   tcccaacactcccatgccaagctccctctctca 239
             ||||||| ||||||| || ||||| ||||||||
Sbjct: 66462 tcccaactctcccatcccgagctcgctctctca 66494
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>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1060H01
          Length = 157987

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 82/94 (87%)
 Strand = Plus / Plus

                                                                         
Query: 258   cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgtcgacgcgggccatgggat 317
             |||||||||||||||||||||||||  |||||||||||||||||||||||| || || | 
Sbjct: 26655 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 26714

                                               
Query: 318   gcctgggggcacgacggtcgatgtgggcaagggt 351
             ||| || ||||| || || ||||| |||||||||
Sbjct: 26715 gcccggcggcacaaccgttgatgtaggcaagggt 26748



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                         
Query: 147   gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 206
             |||||| || |||||||||||||| |||||  |||||| |||||||||| | || |||||
Sbjct: 26075 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 26134

                                              
Query: 207   tcccaacactcccatgccaagctccctctctca 239
             ||||||| ||||||| || ||||| ||||||||
Sbjct: 26135 tcccaactctcccatcccgagctcgctctctca 26167
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>emb|AL691513.13| Mouse DNA sequence from clone RP23-451C8 on chromosome X, complete
             sequence
          Length = 121936

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 84    gctgccctctgccctgccctcc 105
             ||||||||||||||||||||||
Sbjct: 19015 gctgccctctgccctgccctcc 19036
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>gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, complete sequence
          Length = 198984

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    cctctgccctgccctccatgg 109
             |||||||||||||||||||||
Sbjct: 89203 cctctgccctgccctccatgg 89223
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>gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome 8, complete sequence
          Length = 201483

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 76     tcctcattgctgccctctgcc 96
              |||||||||||||||||||||
Sbjct: 104523 tcctcattgctgccctctgcc 104503
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>gb|AC163394.4| Mus musculus chromosome 15, clone RP24-241D13, complete sequence
          Length = 154751

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   ccatgccaagctccctctctc 238
             |||||||||||||||||||||
Sbjct: 77707 ccatgccaagctccctctctc 77727
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>gb|AC102847.3| Mus musculus, clone RP24-406I1, complete sequence
          Length = 146259

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   ccatgccaagctccctctctc 238
             |||||||||||||||||||||
Sbjct: 10116 ccatgccaagctccctctctc 10136
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 289    ggcgtccatgtcgacgcgggccatg 313
              ||||||||||||| |||||||||||
Sbjct: 275597 ggcgtccatgtcggcgcgggccatg 275621
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>gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence
          Length = 165072

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    tgccctctgccctgccctcca 106
             |||||||||||||||||||||
Sbjct: 52191 tgccctctgccctgccctcca 52171
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>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence
          Length = 152722

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    tgccctctgccctgccctcca 106
             |||||||||||||||||||||
Sbjct: 22839 tgccctctgccctgccctcca 22859
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>dbj|AK022038.1| Homo sapiens cDNA FLJ11976 fis, clone HEMBB1001253
          Length = 3174

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 83  tgctgccctctgccctgccct 103
           |||||||||||||||||||||
Sbjct: 187 tgctgccctctgccctgccct 167
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>gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, complete sequence
          Length = 194165

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 89    cctctgccctgccctccatgg 109
             |||||||||||||||||||||
Sbjct: 97329 cctctgccctgccctccatgg 97309
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>gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome 8, complete sequence
          Length = 252334

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    ggggcaatactgggagtctg 202
              ||||||||||||||||||||
Sbjct: 156303 ggggcaatactgggagtctg 156322
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>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3
              Contains the GTF3C5 gene for general transcription factor
              IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester
              lipase (bile salt-stimulated lipase), the CELP gene for
              carboxyl ester lipase pseudogene, the RALGDS gene for ral
              guanine nucleotide dissociation stimulator, the gene for
              Forssman glycolipid synthetase (FS), three novel genes and
              six CpG islands, complete sequence
          Length = 152863

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tgctgccctctgccctgccc 102
              ||||||||||||||||||||
Sbjct: 119706 tgctgccctctgccctgccc 119725
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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 84     gctgccctctgccctgccctccat 107
              ||||||||| ||||||||||||||
Sbjct: 328111 gctgccctcggccctgccctccat 328088
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>gb|AC107623.2| Homo sapiens chromosome 3 clone RP11-648C16, complete sequence
          Length = 176901

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    tgccgtcagcttcctcattg 84
             ||||||||||||||||||||
Sbjct: 73263 tgccgtcagcttcctcattg 73244
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>gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, complete sequence
          Length = 171297

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 65   tgccgtcagcttcctcattg 84
            ||||||||||||||||||||
Sbjct: 5190 tgccgtcagcttcctcattg 5209
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>gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164595

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     ctgccctctgccctgccctc 104
              ||||||||||||||||||||
Sbjct: 124562 ctgccctctgccctgccctc 124543
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>gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157198

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    ctgccctctgccctgccctc 104
             ||||||||||||||||||||
Sbjct: 60287 ctgccctctgccctgccctc 60306



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  ctgccctctgccctgccctc 104
           ||||||||||||||||||||
Sbjct: 771 ctgccctctgccctgccctc 790
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>gb|AC124944.8| Homo sapiens 3 BAC RP11-352G9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 121914

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 85   ctgccctctgccctgccctc 104
            ||||||||||||||||||||
Sbjct: 1275 ctgccctctgccctgccctc 1256
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>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster,
             complete sequence
          Length = 59816

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   ggtgaacgtcggctcgggcg 289
             ||||||||||||||||||||
Sbjct: 42394 ggtgaacgtcggctcgggcg 42413
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>gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11, complete sequence
          Length = 46305

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tgctgccctctgccctgccc 102
             ||||||||||||||||||||
Sbjct: 44281 tgctgccctctgccctgccc 44262
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>gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complete sequence
          Length = 198162

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    ggggcaatactgggagtctg 202
              ||||||||||||||||||||
Sbjct: 160771 ggggcaatactgggagtctg 160752
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>gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complete sequence
          Length = 40203

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tgctgccctctgccctgccc 102
             ||||||||||||||||||||
Sbjct: 20582 tgctgccctctgccctgccc 20601


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,412,010
Number of Sequences: 3902068
Number of extensions: 2412010
Number of successful extensions: 53371
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53285
Number of HSP's gapped (non-prelim): 79
length of query: 351
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 329
effective length of database: 17,147,199,772
effective search space: 5641428724988
effective search space used: 5641428724988
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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