ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet123b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PIP11_ORYSA (Q6EU94) Aquaporin PIP1.1 (Plasma membrane intrinsic... 52 3e-07
2PIP13_ORYSA (Q9SXF8) Aquaporin PIP 1.3 (Plasma membrane intrinsi... 51 8e-07
3PIP14_ARATH (Q39196) Probable aquaporin PIP1.4 (Plasma membrane ... 48 8e-06
4PIP13_ARATH (Q08733) Aquaporin PIP1.3 (Plasma membrane intrinsic... 48 8e-06
5PIP12_ARATH (Q06611) Aquaporin PIP1.2 (Plasma membrane intrinsic... 48 8e-06
6PIP11_VICFA (P61838) Aquaporin PIP1.1 (Plasma membrane intrinsic... 48 8e-06
7PIP11_ARATH (P61837) Aquaporin PIP1.1 (Plasma membrane intrinsic... 48 8e-06
8PIP15_ARATH (Q8LAA6) Probable aquaporin PIP1.5 (Plasma membrane ... 47 1e-05
9PIP1_LYCES (Q08451) Probable aquaporin PIP-type pTOM75 (Ripening... 42 6e-04
10PIP2_PEA (P25794) Probable aquaporin PIP-type 7a (Turgor-respons... 41 8e-04
11AEXT_AERSA (Q93Q17) ADP-ribosyltransferase toxin aexT (EC 2.4.2.... 30 1.4
12PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3,... 28 9.0

>PIP11_ORYSA (Q6EU94) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)|
           (PIP1a) (OsPIP1.1) (Water channel protein RWC1) (RWC-1)
          Length = 289

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +2

Query: 89  MEGKEEDVRLGANKYSERQPIGTAA 163
           MEGKEEDVRLGAN+YSERQPIGTAA
Sbjct: 1   MEGKEEDVRLGANRYSERQPIGTAA 25



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>PIP13_ORYSA (Q9SXF8) Aquaporin PIP 1.3 (Plasma membrane intrinsic protein 1.3)|
           (OsPIP1.3) (Water channel protein RWC3) (RWC-3)
          Length = 288

 Score = 51.2 bits (121), Expect = 8e-07
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +2

Query: 89  MEGKEEDVRLGANKYSERQPIGTAA 163
           MEGKEEDVRLGAN+Y+ERQPIGTAA
Sbjct: 1   MEGKEEDVRLGANRYTERQPIGTAA 25



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>PIP14_ARATH (Q39196) Probable aquaporin PIP1.4 (Plasma membrane intrinsic|
           protein 1.4) (Transmembrane protein C) (TMP-C)
          Length = 287

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +2

Query: 89  MEGKEEDVRLGANKYSERQPIGTAA 163
           MEGKEEDVR+GANK+ ERQPIGT+A
Sbjct: 1   MEGKEEDVRVGANKFPERQPIGTSA 25



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>PIP13_ARATH (Q08733) Aquaporin PIP1.3 (Plasma membrane intrinsic protein 1c)|
           (PIP1c) (Transmembrane protein B) (TMP-B)
          Length = 286

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +2

Query: 89  MEGKEEDVRLGANKYSERQPIGTAA 163
           MEGKEEDVR+GANK+ ERQPIGT+A
Sbjct: 1   MEGKEEDVRVGANKFPERQPIGTSA 25



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>PIP12_ARATH (Q06611) Aquaporin PIP1.2 (Plasma membrane intrinsic protein 1b)|
           (PIP1b) (Transmembrane protein A) (TMP-A) (AthH2)
          Length = 286

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +2

Query: 89  MEGKEEDVRLGANKYSERQPIGTAA 163
           MEGKEEDVR+GANK+ ERQPIGT+A
Sbjct: 1   MEGKEEDVRVGANKFPERQPIGTSA 25



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>PIP11_VICFA (P61838) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)|
           (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1)
          Length = 286

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +2

Query: 89  MEGKEEDVRLGANKYSERQPIGTAA 163
           MEGKEEDVR+GANK+ ERQPIGT+A
Sbjct: 1   MEGKEEDVRVGANKFPERQPIGTSA 25



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>PIP11_ARATH (P61837) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)|
           (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1)
          Length = 286

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +2

Query: 89  MEGKEEDVRLGANKYSERQPIGTAA 163
           MEGKEEDVR+GANK+ ERQPIGT+A
Sbjct: 1   MEGKEEDVRVGANKFPERQPIGTSA 25



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>PIP15_ARATH (Q8LAA6) Probable aquaporin PIP1.5 (Plasma membrane intrinsic|
           protein 1d) (PIP1d)
          Length = 287

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +2

Query: 89  MEGKEEDVRLGANKYSERQPIGTAA 163
           MEGKEEDV +GANK+ ERQPIGTAA
Sbjct: 1   MEGKEEDVNVGANKFPERQPIGTAA 25



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>PIP1_LYCES (Q08451) Probable aquaporin PIP-type pTOM75 (Ripening-associated|
           membrane protein) (RAMP)
          Length = 286

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +2

Query: 92  EGKEEDVRLGANKYSERQPIGTAA 163
           E KEEDV+LGANK+ E QP+GTAA
Sbjct: 3   ENKEEDVKLGANKFRETQPLGTAA 26



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>PIP2_PEA (P25794) Probable aquaporin PIP-type 7a (Turgor-responsive protein|
           7a) (Turgor-responsive protein 31)
          Length = 289

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 89  MEGKEEDVRLGANKYSERQPIGTAA 163
           ME KE+DV LGANK+ ERQP+G AA
Sbjct: 1   MEAKEQDVSLGANKFPERQPLGIAA 25



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>AEXT_AERSA (Q93Q17) ADP-ribosyltransferase toxin aexT (EC 2.4.2.-) (Exoenzyme|
           T)
          Length = 475

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +2

Query: 14  TKAAHLVPFQLRRASDHRPPARAAAMEGKEEDVRLGANKYSERQPIGT 157
           T AA + P Q   +  +  PA  A  EG +E   L A +Y   QP GT
Sbjct: 234 TTAAAVAPLQSGESEVNVEPADKALAEGLQEQFGLEAEQYLGEQPHGT 281



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>PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3, chloroplast|
           precursor
          Length = 374

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 2   PHAHTKAAHLVPFQLRRASDHRPPARAAAMEGKEED 109
           P  H+      PF+L   S  RPP  AAA  G  ++
Sbjct: 21  PTIHSSTGSRRPFRLPLRSSRRPPVAAAAASGVPDE 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.122    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,645,630
Number of Sequences: 219361
Number of extensions: 314628
Number of successful extensions: 675
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 80,573,946
effective HSP length: 29
effective length of database: 74,212,477
effective search space used: 1781099448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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