ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet122f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding p... 769 0.0
2gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulga... 500 e-138
3gb|AY106149.1| Zea mays PCO102434 mRNA sequence 385 e-104
4dbj|AK098864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 335 7e-89
5dbj|AK060904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 335 7e-89
6dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 335 7e-89
7gb|AF094776.1|AF094776 Oryza sativa chlorophyll a/b-binding prot... 327 2e-86
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
9dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
10gb|AY104104.1| Zea mays PCO079073 mRNA sequence 52 0.002
11gb|AY347803.1| Malus x domestica clone 8-2 chlorophyll a/b-bindi... 50 0.006
12gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB... 48 0.024
13dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-... 46 0.094
14dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.37
15dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-... 44 0.37
16gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.5
17gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 42 1.5
18emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O... 42 1.5
19gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.5
20ref|XM_631624.1| Dictyostelium discoideum AX4 hypothetical prote... 42 1.5
21gb|AC164112.2| Mus musculus BAC clone RP23-266E12 from chromosom... 42 1.5
22gb|AC154201.2| Mus musculus BAC clone RP24-83I8 from chromosome ... 42 1.5
23gb|AF165214.1|AF165214 Bacteriophage D3, complete genome 42 1.5
24emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll ... 42 1.5
25emb|X64198.1|NTLHC1R N.tabacum LHC-I mRNA for photosystem I ligh... 42 1.5
26ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) ... 42 1.5
27dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain ... 42 1.5
28gb|AC149531.2| Xenopus tropicalis clone ISB-331C21, complete seq... 40 5.8
29gb|AC101277.16| Mus musculus chromosome 1, clone RP23-101P2, com... 40 5.8
30gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, co... 40 5.8
31ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
32ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
33ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
34ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
35ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
36ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
37ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
38ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
39gb|AF154570.2| Mus musculus fibroblast growth factor receptor 1 ... 40 5.8
40gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's H... 40 5.8
41gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 5.8
42gb|BC096514.1| Xenopus tropicalis c6.1a protein, mRNA (cDNA clon... 40 5.8
43gb|AC183614.3| Pan troglodytes BAC clone CH251-186N21 from chrom... 40 5.8
44gb|AC142208.3| Homo sapiens chromosome 16 clone XXfos-89260C6, c... 40 5.8
45ref|XM_823936.1| Trypanosoma brucei TREU927 hypothetical protein... 40 5.8
46gb|AC037471.12| Homo sapiens chromosome 15, clone RP11-810K23, c... 40 5.8
47gb|AY163380.1| Zea mays putative ROP family GTPase ROP6 gene, co... 40 5.8
48gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, comp... 40 5.8
49gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, com... 40 5.8
50emb|AJ245628.1|HSA245628 Homo sapiens EVN gene for pre-pro-enovin 40 5.8
51gb|AC009945.2| Homo sapiens BAC clone CTD-2060L22 from 7, comple... 40 5.8
52gb|AC084821.26| Mus musculus strain C57BL/6J clone rp23-395h6 ma... 40 5.8
53emb|AL357079.24| Human DNA sequence from clone RP11-7O11 on chro... 40 5.8
54gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, com... 40 5.8
55gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p... 40 5.8
56ref|NM_001016457.2| Xenopus tropicalis c6.1a protein (c6.1a), mRNA 40 5.8
57gb|AC102791.15| Mus musculus chromosome 3, clone RP23-278C9, com... 40 5.8
58gb|AC162293.4| Mus musculus chromosome 3, clone RP24-172J1, comp... 40 5.8
59emb|AJ278665.1|ZMA278665 Zea mays mRNA for putative Rop family G... 40 5.8
60gb|AC021585.7| Homo sapiens chromosome , clone RP11-96F3, comple... 40 5.8
61gb|AC149383.2| Phakopsora pachyrhizi clone JGIAFNA-5A9, complete... 40 5.8
62gb|AC149146.3| Xenopus tropicalis clone ISB-156G23, complete seq... 40 5.8
63gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Canc... 40 5.8
64gb|AY125979.1| Zea mays hexokinase mRNA, complete cds 40 5.8
65emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding ... 40 5.8
66gb|AF279892.1| Rattus norvegicus 7-dehydrocholesterol reductase ... 40 5.8
67gb|AE012121.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 5.8
68dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.8
69gb|AF349018.1|F349018S01 Homo sapiens topoisomerase I gene, exon... 40 5.8
70gb|AC104835.3| Homo sapiens chromosome 3 clone RP11-27J5, comple... 40 5.8
71gb|AC015917.30| Homo sapiens chromosome 17, clone CTD-2350C19, c... 40 5.8
72gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 5.8
73gb|AC005038.5|AC005038 Homo sapiens BAC clone RP11-486I22 from 1... 40 5.8
74gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Canc... 40 5.8
75gb|AC140838.3| Homo sapiens chromosome 16 clone XXfos-84069G6, c... 40 5.8
76dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
77gb|AC140540.3| Homo sapiens chromosome 16 clone XXfos-88730H2, c... 40 5.8
78gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, co... 40 5.8
79gb|AC087793.17| Homo sapiens chromosome 8, clone RP5-1118A7, com... 40 5.8
80dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.8
81gb|AC135263.5| Homo sapiens chromosome 15, clone RP13-381O4, com... 40 5.8
82dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
83gb|DQ163915.1| Bacteriophage PA11, complete genome 40 5.8
84dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
85emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca... 40 5.8
86emb|X71965.1|CSCAB2MR C.stellata cab2 mRNA for light harvesting ... 40 5.8
87dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
88dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
89dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
90dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
91dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
92dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
93dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
94dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
95dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
96gb|AY106111.1| Zea mays PCO074668 mRNA sequence 40 5.8
97emb|CR760965.2| Xenopus tropicalis finished cDNA, clone TEgg028n11 40 5.8
98gb|AF115765.1|AF115765 Homo sapiens Artemin gene, alternative fo... 40 5.8
99gb|AC005726.1|AC005726 Homo sapiens chromosome 17, clone hRPK.1... 40 5.8
100gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protei... 40 5.8
101gb|AC087229.27| Mus musculus strain C57BL/6J chromosome 1 clone ... 40 5.8
102emb|Y11740.1|HSY11740 H.sapiens whn gene, exon 1a and 1b 40 5.8 
>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 784

 Score =  769 bits (388), Expect = 0.0
 Identities = 393/395 (99%)
 Strand = Plus / Plus

                                                                       
Query: 38  ccgcgcagcaaggagcagccagcatcgagagagcagcaatggctatggcgtcgtcaagcg 97
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   ccgcgcagcaaggagcagccagcatcgagagagcagcaatggctatggcgtcgtcaagcg 62

                                                                       
Query: 98  ggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtcccggtccg 157
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  ggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtcccggtccg 122

                                                                       
Query: 158 gccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccg 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccg 182

                                                                       
Query: 218 ccgagtggttccccggccagccccgccccgcccatctggacggctcctcgccaggggact 277
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ccgagtggttccccggccagccccgccccgcccatctggacggctcctcgccaggggact 242

                                                                       
Query: 278 tcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagt 337
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagt 302

                                                                       
Query: 338 ccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccggtgg 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 303 ccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccggagg 362

                                              
Query: 398 cgctggggctgggcaactgggtgaaggcgcangag 432
           ||||||||||||||||||||||||||||||| |||
Sbjct: 363 cgctggggctgggcaactgggtgaaggcgcaggag 397
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>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley,
           Prato, mRNA Chloroplast, 878 nt]
          Length = 878

 Score =  500 bits (252), Expect = e-138
 Identities = 274/279 (98%), Gaps = 2/279 (0%)
 Strand = Plus / Plus

                                                                       
Query: 155 ccggccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgt 214
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   ccggccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgt 61

                                                                       
Query: 215 ccgccgagtggttccccggccagccccgccccgcccatctggacggctcctcgcca-ggg 273
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 62  ccgccgagtggttccccggccagccccgccccgcccatctggccggctcctcgccaaggg 121

                                                                       
Query: 274 gacttcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaag 333
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gacttcgggttcgacccc-tgggcctcgccaccgtgccggagaacttcgagcggttcaag 180

                                                                       
Query: 334 gagtccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccg 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagtccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccg 240

                                                  
Query: 394 gtggcgctggggctgggcaactgggtgaaggcgcangag 432
           | ||||||||||||||||||||||||||||||||| |||
Sbjct: 241 gaggcgctggggctgggcaactgggtgaaggcgcaggag 279
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>gb|AY106149.1| Zea mays PCO102434 mRNA sequence
          Length = 1081

 Score =  385 bits (194), Expect = e-104
 Identities = 323/364 (88%), Gaps = 3/364 (0%)
 Strand = Plus / Plus

                                                                       
Query: 69  agcagcaatggctatggcgtcgtcaagcgggctcaggagctgcagcgccgtgggcgtgcc 128
           |||||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 58  agcagcaatggtgatggcgtcgtcgagcgggctgaggagctgcagcgccgtgggcgtgcc 117

                                                                       
Query: 129 gagcctgctggcgccttcgtcccggtccggccgctccggactgccgttctgcgcctacgc 188
            |||||||||||||| ||||||||||||||||||  | | | ||||||||||||| ||||
Sbjct: 118 cagcctgctggcgccgtcgtcccggtccggccgc--ctggc-gccgttctgcgccaacgc 174

                                                                       
Query: 189 caccacctccggccgcgtcaccatgtccgccgagtggttccccggccagccccgccccgc 248
           ||||||||| |||||||||||||||||||| |||||| | ||||||||||| ||||| ||
Sbjct: 175 caccacctctggccgcgtcaccatgtccgcggagtggatgcccggccagccacgccctgc 234

                                                                       
Query: 249 ccatctggacggctcctcgccaggggacttcgggttcgaccccctgggcctcgccaccgt 308
           ||| || ||||||||||| || ||||||||||| ||||| || ||||||||||| |||||
Sbjct: 235 ccacctcgacggctcctctcccggggacttcggcttcgatccgctgggcctcgcgaccgt 294

                                                                       
Query: 309 gccggagaacttcgagcggttcaaggagtccgagatctaccactgccgctgggccatgct 368
           |||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||
Sbjct: 295 gccggagaacttcgagcggttcaaggagtcagaggtgtaccactgccgctgggccatgct 354

                                                                       
Query: 369 ctgcgtgccaggggtgctggtgccggtggcgctggggctgggcaactgggtgaaggcgca 428
              ||| || ||| | ||||||||||  || ||||| |||||||||||||||||||||||
Sbjct: 355 tgccgtccccgggatcctggtgccggaagctctgggcctgggcaactgggtgaaggcgca 414

               
Query: 429 ngag 432
            |||
Sbjct: 415 ggag 418
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>dbj|AK098864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A03, full
           insert sequence
          Length = 1046

 Score =  335 bits (169), Expect = 7e-89
 Identities = 240/264 (90%)
 Strand = Plus / Plus

                                                                       
Query: 169 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 228
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 164 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 223

                                                                       
Query: 229 cccggccagccccgccccgcccatctggacggctcctcgccaggggacttcgggttcgac 288
           || |||||||| ||||||||||| || ||||||||||| || || |||||||||||||||
Sbjct: 224 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 283

                                                                       
Query: 289 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 348
           || ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 284 ccgctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 343

                                                                       
Query: 349 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggtggcgctggggctg 408
           |||||||| ||||||||||||   ||||| |||||| ||||||||| |||||||||||||
Sbjct: 344 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 403

                                   
Query: 409 ggcaactgggtgaaggcgcangag 432
           |||||||||||| ||||||| |||
Sbjct: 404 ggcaactgggtgcaggcgcaggag 427



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 94  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 149
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 95  agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 150
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>dbj|AK060904.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E07, full
           insert sequence
          Length = 1051

 Score =  335 bits (169), Expect = 7e-89
 Identities = 240/264 (90%)
 Strand = Plus / Plus

                                                                       
Query: 169 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 228
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 169 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 228

                                                                       
Query: 229 cccggccagccccgccccgcccatctggacggctcctcgccaggggacttcgggttcgac 288
           || |||||||| ||||||||||| || ||||||||||| || || |||||||||||||||
Sbjct: 229 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 288

                                                                       
Query: 289 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 348
           || ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 289 ccgctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 348

                                                                       
Query: 349 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggtggcgctggggctg 408
           |||||||| ||||||||||||   ||||| |||||| ||||||||| |||||||||||||
Sbjct: 349 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 408

                                   
Query: 409 ggcaactgggtgaaggcgcangag 432
           |||||||||||| ||||||| |||
Sbjct: 409 ggcaactgggtgcaggcgcaggag 432



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 94  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 149
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 100 agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 155
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>dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F04, full
           insert sequence
          Length = 1958

 Score =  335 bits (169), Expect = 7e-89
 Identities = 240/264 (90%)
 Strand = Plus / Plus

                                                                       
Query: 169 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 228
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 166 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 225

                                                                       
Query: 229 cccggccagccccgccccgcccatctggacggctcctcgccaggggacttcgggttcgac 288
           || |||||||| ||||||||||| || ||||||||||| || || |||||||||||||||
Sbjct: 226 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 285

                                                                       
Query: 289 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 348
           || ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 286 ccgctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 345

                                                                       
Query: 349 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggtggcgctggggctg 408
           |||||||| ||||||||||||   ||||| |||||| ||||||||| |||||||||||||
Sbjct: 346 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 405

                                   
Query: 409 ggcaactgggtgaaggcgcangag 432
           |||||||||||| ||||||| |||
Sbjct: 406 ggcaactgggtgcaggcgcaggag 429



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 94  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 149
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 97  agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 152
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>gb|AF094776.1|AF094776 Oryza sativa chlorophyll a/b-binding protein precursor (Cab26)
           mRNA, nuclear gene encoding chloroplast protein,
           complete cds
          Length = 1050

 Score =  327 bits (165), Expect = 2e-86
 Identities = 239/264 (90%)
 Strand = Plus / Plus

                                                                       
Query: 169 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 228
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 149 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 208

                                                                       
Query: 229 cccggccagccccgccccgcccatctggacggctcctcgccaggggacttcgggttcgac 288
           || |||||||| ||||||||||| || ||||||||||| || || |||||||||||||||
Sbjct: 209 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 268

                                                                       
Query: 289 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 348
           || |||||||| |||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 269 ccgctgggccttgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 328

                                                                       
Query: 349 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggtggcgctggggctg 408
           |||||||| ||||||||||||   ||||| |||||| ||||||||| |||||||||||||
Sbjct: 329 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 388

                                   
Query: 409 ggcaactgggtgaaggcgcangag 432
           |||||||||||| ||||||| |||
Sbjct: 389 ggcaactgggtgcaggcgcaggag 412



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 94  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 149
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 80  agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 135
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  151 bits (76), Expect = 2e-33
 Identities = 91/96 (94%)
 Strand = Plus / Plus

                                                                            
Query: 274      gacttcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaag 333
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12295875 gacttcgggttcgacccgctgggcctcgccaccgtgccggagaacttcgagcggttcaag 12295934

                                                    
Query: 334      gagtccgagatctaccactgccgctgggccatgctc 369
                ||||| ||| | ||||||||||| ||||||||||||
Sbjct: 12295935 gagtcggaggtgtaccactgccggtgggccatgctc 12295970



 Score =  131 bits (66), Expect = 2e-27
 Identities = 90/98 (91%)
 Strand = Plus / Plus

                                                                            
Query: 169      ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 228
                |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 12295670 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 12295729

                                                      
Query: 229      cccggccagccccgccccgcccatctggacggctcctc 266
                || |||||||| ||||||||||| || |||||||||||
Sbjct: 12295730 ccgggccagccacgccccgcccacctcgacggctcctc 12295767



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                        
Query: 94       agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 149
                |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 12295601 agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 12295656



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                      
Query: 379      ggggtgctggtgccggtggcgctggggctgggcaactgggtgaaggcgcangag 432
                |||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||
Sbjct: 12296064 ggggtgttggtgccggaggcgctggggctgggcaactgggtgcaggcgcaggag 12296117
to top
>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0578B12
          Length = 151192

 Score =  151 bits (76), Expect = 2e-33
 Identities = 91/96 (94%)
 Strand = Plus / Plus

                                                                         
Query: 274   gacttcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaag 333
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12335 gacttcgggttcgacccgctgggcctcgccaccgtgccggagaacttcgagcggttcaag 12394

                                                 
Query: 334   gagtccgagatctaccactgccgctgggccatgctc 369
             ||||| ||| | ||||||||||| ||||||||||||
Sbjct: 12395 gagtcggaggtgtaccactgccggtgggccatgctc 12430



 Score =  131 bits (66), Expect = 2e-27
 Identities = 90/98 (91%)
 Strand = Plus / Plus

                                                                         
Query: 169   ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 228
             |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 12130 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 12189

                                                   
Query: 229   cccggccagccccgccccgcccatctggacggctcctc 266
             || |||||||| ||||||||||| || |||||||||||
Sbjct: 12190 ccgggccagccacgccccgcccacctcgacggctcctc 12227



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                     
Query: 94    agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 149
             |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 12061 agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 12116



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                   
Query: 379   ggggtgctggtgccggtggcgctggggctgggcaactgggtgaaggcgcangag 432
             |||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||
Sbjct: 12524 ggggtgttggtgccggaggcgctggggctgggcaactgggtgcaggcgcaggag 12577
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>gb|AY104104.1| Zea mays PCO079073 mRNA sequence
          Length = 867

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 268 ccaggggacttcgggttcgaccccctgggcctcg 301
           ||||| |||||||| |||||||||||||||||||
Sbjct: 313 ccaggtgacttcggcttcgaccccctgggcctcg 346
to top
>gb|AY347803.1| Malus x domestica clone 8-2 chlorophyll a/b-binding protein type I
           mRNA, partial cds; nuclear gene for chloroplast product
          Length = 462

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 209 ccatgtccgccgagtggttccccggccagccccgccc 245
           ||||||||||||||||| | |||||| ||||||||||
Sbjct: 158 ccatgtccgccgagtggatgcccggcgagccccgccc 194



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 307 gtgccggagaacttcgagcggttcaaggagtccgag 342
           ||||| |||||||| ||| |||||||||||||||||
Sbjct: 256 gtgccagagaacttagagaggttcaaggagtccgag 291
to top
>gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB), ORFC (orfC), ORFD
             (orfD), ORFE (orfE), ORFF (orfF), ORFG (orfG), ORFH
             (orfH), LinX1 (linX1), LinX2 (linX2), and LinA (linA)
             genes, complete cds; insertion sequence IS6100A, complete
             sequence; ORFJ' (orfJ') and ORFK (orfK) genes, complete
             cds; insertion sequence IS6100B, complete sequence; LinC
             (linC) gene, complete cds; insertion sequence IS6100C,
             complete sequence; and 'ORFN ('orfN), ORFO (orfO), ORFP
             (orfP), ORFQ (orfQ), ORFR (orfR), ORFS (orfS), ORFT
             (orfT), ORFU (orfU), ORFV (orfV), ORFW (orfW), ORFX
             (orfX), and ORFY (orfY) genes, complete cds
          Length = 41034

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 379   ggggtgctggtgccggtggcgctggggctggg 410
             |||||||||| || ||||||||||||||||||
Sbjct: 38995 ggggtgctggcgctggtggcgctggggctggg 39026
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>dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-harvesting
            chlorophyll-a/b protein of photosystem I (Type III),
            complete cds
          Length = 2389

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 273  ggacttcgggttcgaccccctgggcct 299
            ||||||||| |||||||||||||||||
Sbjct: 1055 ggacttcggcttcgaccccctgggcct 1081
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 381     ggtgctggtgccggtggcgctg 402
               ||||||||||||||||||||||
Sbjct: 1614775 ggtgctggtgccggtggcgctg 1614796
to top
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting
           chlorophyll-a/b protein of photosystem I, complete cds
          Length = 1886

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 274 gacttcgggttcgaccccctgggcct 299
           |||||||| |||||||||||||||||
Sbjct: 402 gacttcggcttcgaccccctgggcct 427
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 379   ggggtgctggtgccggtggcgctgg 403
             |||||||||||||||||| ||||||
Sbjct: 23948 ggggtgctggtgccggtgacgctgg 23972
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 393    ggtggcgctggggctgggcaactgg 417
              |||||||| ||||||||||||||||
Sbjct: 970781 ggtggcgccggggctgggcaactgg 970757
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>emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O16 on chromosome 22, complete
             sequence
          Length = 50502

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 228   ccccggccagccccgccccgc 248
             |||||||||||||||||||||
Sbjct: 10640 ccccggccagccccgccccgc 10660
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 353   gccgctgggccatgctctgcgtgcc 377
             ||||||||||||||||| |||||||
Sbjct: 18354 gccgctgggccatgctcggcgtgcc 18330
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>ref|XM_631624.1| Dictyostelium discoideum AX4 hypothetical protein (DDB0187910),
            partial mRNA
          Length = 2787

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 13   tgttcttcttcctgttgttgt 33
            |||||||||||||||||||||
Sbjct: 2585 tgttcttcttcctgttgttgt 2565
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>gb|AC164112.2| Mus musculus BAC clone RP23-266E12 from chromosome 16, complete
             sequence
          Length = 171693

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    tgttcttcttcctgttgttgt 33
             |||||||||||||||||||||
Sbjct: 44932 tgttcttcttcctgttgttgt 44912
to top
>gb|AC154201.2| Mus musculus BAC clone RP24-83I8 from chromosome 16, complete sequence
          Length = 172923

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    tgttcttcttcctgttgttgt 33
             |||||||||||||||||||||
Sbjct: 12791 tgttcttcttcctgttgttgt 12811
to top
>gb|AF165214.1|AF165214 Bacteriophage D3, complete genome
          Length = 56425

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 184   tacgccaccacctccggccgc 204
             |||||||||||||||||||||
Sbjct: 33095 tacgccaccacctccggccgc 33115
to top
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein
           LHCP
          Length = 967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 348 ccactgccgctgggccatgct 368
           |||||||||||||||||||||
Sbjct: 364 ccactgccgctgggccatgct 384
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>emb|X64198.1|NTLHC1R N.tabacum LHC-I mRNA for photosystem I light-harvesting chlorophyll
           a/b-binding protein
          Length = 845

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 401 tggggctgggcaactgggtgaaggc 425
           ||||||||||||||||||| |||||
Sbjct: 355 tggggctgggcaactgggtaaaggc 379



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 210 catgtccgccgagtggttccccggccagccccgccc 245
           |||||| ||||||||| | || ||||||||||||||
Sbjct: 164 catgtctgccgagtggatgccgggccagccccgccc 199
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>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 14     gttcttcttcctgttgttgtc 34
              |||||||||||||||||||||
Sbjct: 611006 gttcttcttcctgttgttgtc 610986
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>dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region,
             complete sequence, 4 of 5
          Length = 200000

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 14    gttcttcttcctgttgttgtc 34
             |||||||||||||||||||||
Sbjct: 11006 gttcttcttcctgttgttgtc 10986
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>gb|AC149531.2| Xenopus tropicalis clone ISB-331C21, complete sequence
          Length = 98801

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    agcgggctcaggagctgcag 113
             ||||||||||||||||||||
Sbjct: 71384 agcgggctcaggagctgcag 71365
to top
>gb|AC101277.16| Mus musculus chromosome 1, clone RP23-101P2, complete sequence
          Length = 207021

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 227    tccccggccagccccgccccgccc 250
              |||||| |||||||||||||||||
Sbjct: 161740 tccccgcccagccccgccccgccc 161717
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>gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, complete sequence
          Length = 174746

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   ccagccccgccccgcccatc 253
             ||||||||||||||||||||
Sbjct: 25247 ccagccccgccccgcccatc 25266
to top
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 258 gacttcggcttcgaccccctgggtctcg 285
to top
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 259 gacttcggcttcgaccccctgggtctcg 286
to top
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1058

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 261 gacttcggcttcgaccccctgggtctcg 288
to top
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 264 gacttcggcttcgaccccctgggtctcg 291
to top
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 264 gacttcggcttcgaccccctgggtctcg 291
to top
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
to top
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1069

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
to top
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 268 gacttcggcttcgaccccctgggtctcg 295
to top
>gb|AF154570.2| Mus musculus fibroblast growth factor receptor 1 (Fgfr1) gene, exons
            6 to 9 and partial cds, alternatively spliced
          Length = 5993

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  ccagccccgccccgcccatc 253
            ||||||||||||||||||||
Sbjct: 5458 ccagccccgccccgcccatc 5439
to top
>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237425

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     cagcaaggagcagccagcat 62
              ||||||||||||||||||||
Sbjct: 144918 cagcaaggagcagccagcat 144899
to top
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    tgctggtgccggtggcgctg 402
              ||||||||||||||||||||
Sbjct: 678386 tgctggtgccggtggcgctg 678405
to top
>gb|BC096514.1| Xenopus tropicalis c6.1a protein, mRNA (cDNA clone MGC:108101
           IMAGE:7004768), complete cds
          Length = 2375

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  agcgggctcaggagctgcag 113
           ||||||||||||||||||||
Sbjct: 736 agcgggctcaggagctgcag 755
to top
>gb|AC183614.3| Pan troglodytes BAC clone CH251-186N21 from chromosome 15, complete
             sequence
          Length = 136531

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    gttcttcttcctgttgttgt 33
             ||||||||||||||||||||
Sbjct: 82632 gttcttcttcctgttgttgt 82613
to top
>gb|AC142208.3| Homo sapiens chromosome 16 clone XXfos-89260C6, complete sequence
          Length = 37483

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   tccccggccagccccgccccgccc 250
             ||||| ||||||||||||||||||
Sbjct: 23797 tccccagccagccccgccccgccc 23774
to top
>ref|XM_823936.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.1410)
            partial mRNA
          Length = 1455

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 94   agcgggctcaggagctgcag 113
            ||||||||||||||||||||
Sbjct: 1235 agcgggctcaggagctgcag 1254
to top
>gb|AC037471.12| Homo sapiens chromosome 15, clone RP11-810K23, complete sequence
          Length = 217553

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     gttcttcttcctgttgttgt 33
              ||||||||||||||||||||
Sbjct: 159062 gttcttcttcctgttgttgt 159081
to top
>gb|AY163380.1| Zea mays putative ROP family GTPase ROP6 gene, complete cds
          Length = 2031

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    cacgcctgttcttcttcctg 26
            ||||||||||||||||||||
Sbjct: 1410 cacgcctgttcttcttcctg 1391
to top
>gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, complete sequence
          Length = 241627

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    gttcttcttcctgttgttgt 33
             ||||||||||||||||||||
Sbjct: 66713 gttcttcttcctgttgttgt 66694
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>gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, complete sequence
          Length = 155343

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gttcttcttcctgttgttgt 33
            ||||||||||||||||||||
Sbjct: 2442 gttcttcttcctgttgttgt 2461
to top
>emb|AJ245628.1|HSA245628 Homo sapiens EVN gene for pre-pro-enovin
          Length = 1188

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 tccccggccagccccgccccgccc 250
           |||| |||||||||||||||||||
Sbjct: 645 tcccgggccagccccgccccgccc 622
to top
>gb|AC009945.2| Homo sapiens BAC clone CTD-2060L22 from 7, complete sequence
          Length = 75517

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 376   ccaggggtgctggtgccggtggcg 399
             ||||||||||||| ||||||||||
Sbjct: 22524 ccaggggtgctggagccggtggcg 22547
to top
>gb|AC084821.26| Mus musculus strain C57BL/6J clone rp23-395h6 map 1, complete sequence
          Length = 211776

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   ccggtggcgctggggctggg 410
             ||||||||||||||||||||
Sbjct: 75842 ccggtggcgctggggctggg 75861
to top
>emb|AL357079.24| Human DNA sequence from clone RP11-7O11 on chromosome 1, complete
             sequence
          Length = 106769

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   tccccggccagccccgccccgccc 250
             |||| |||||||||||||||||||
Sbjct: 56334 tcccgggccagccccgccccgccc 56311
to top
>gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, complete sequence
          Length = 197616

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     ttcttcttcctgttgttgtc 34
              ||||||||||||||||||||
Sbjct: 152853 ttcttcttcctgttgttgtc 152834
to top
>gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p21-p11, complete
              sequence
          Length = 213611

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     ttcttcttcctgttgttgtc 34
              ||||||||||||||||||||
Sbjct: 102169 ttcttcttcctgttgttgtc 102150
to top
>ref|NM_001016457.2| Xenopus tropicalis c6.1a protein (c6.1a), mRNA
          Length = 2382

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  agcgggctcaggagctgcag 113
           ||||||||||||||||||||
Sbjct: 744 agcgggctcaggagctgcag 763
to top
>gb|AC102791.15| Mus musculus chromosome 3, clone RP23-278C9, complete sequence
          Length = 188017

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 401   tggggctgggcaactgggtgaagg 424
             |||| |||||||||||||||||||
Sbjct: 44947 tgggactgggcaactgggtgaagg 44970
to top
>gb|AC162293.4| Mus musculus chromosome 3, clone RP24-172J1, complete sequence
          Length = 171700

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 401   tggggctgggcaactgggtgaagg 424
             |||| |||||||||||||||||||
Sbjct: 63774 tgggactgggcaactgggtgaagg 63797
to top
>emb|AJ278665.1|ZMA278665 Zea mays mRNA for putative Rop family GTPase, ROP6 (rop6 gene)
          Length = 945

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 7   cacgcctgttcttcttcctg 26
           ||||||||||||||||||||
Sbjct: 622 cacgcctgttcttcttcctg 603
to top
>gb|AC021585.7| Homo sapiens chromosome , clone RP11-96F3, complete sequence
          Length = 187670

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    gttcttcttcctgttgttgt 33
             ||||||||||||||||||||
Sbjct: 63046 gttcttcttcctgttgttgt 63027
to top
>gb|AC149383.2| Phakopsora pachyrhizi clone JGIAFNA-5A9, complete sequence
          Length = 39440

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   cggccagccccgccccgccc 250
             ||||||||||||||||||||
Sbjct: 30471 cggccagccccgccccgccc 30490
to top
>gb|AC149146.3| Xenopus tropicalis clone ISB-156G23, complete sequence
          Length = 96721

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    agcgggctcaggagctgcag 113
             ||||||||||||||||||||
Sbjct: 42241 agcgggctcaggagctgcag 42260
to top
>gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 215780

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   caggggtgctggtgccggtg 396
             ||||||||||||||||||||
Sbjct: 50166 caggggtgctggtgccggtg 50147
to top
>gb|AY125979.1| Zea mays hexokinase mRNA, complete cds
          Length = 1893

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 110 gcagcgccgtgggcgtgccgagcctgct 137
           ||||||||||||||||| |||| |||||
Sbjct: 190 gcagcgccgtgggcgtggcgaggctgct 163
to top
>emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding Lhca4 protein (type 4
           protein of light-harvesting complex of photosystem I)
          Length = 1013

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 279 cgggttcgaccccctgggcctcgc 302
           ||||||||| ||||||||||||||
Sbjct: 223 cgggttcgatcccctgggcctcgc 246
to top
>gb|AF279892.1| Rattus norvegicus 7-dehydrocholesterol reductase (Dhcr7) gene,
           complete cds
          Length = 17734

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 ggccagccccgccccgccca 251
           ||||||||||||||||||||
Sbjct: 898 ggccagccccgccccgccca 879
to top
>gb|AE012121.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 29 of
            460 of the complete genome
          Length = 10770

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 384  gctggtgccggtggcgctgg 403
            ||||||||||||||||||||
Sbjct: 5722 gctggtgccggtggcgctgg 5703
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     ccctgggcctcgccaccgtg 309
               ||||||||||||||||||||
Sbjct: 4683828 ccctgggcctcgccaccgtg 4683847
to top
>gb|AF349018.1|F349018S01 Homo sapiens topoisomerase I gene, exon 1; nuclear gene for
           mitochondrial product
          Length = 1963

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 231 cggccagccccgccccgccc 250
           ||||||||||||||||||||
Sbjct: 696 cggccagccccgccccgccc 677
to top
>gb|AC104835.3| Homo sapiens chromosome 3 clone RP11-27J5, complete sequence
          Length = 192570

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     ctgttcttcttcctgttgtt 31
              ||||||||||||||||||||
Sbjct: 146295 ctgttcttcttcctgttgtt 146314
to top
>gb|AC015917.30| Homo sapiens chromosome 17, clone CTD-2350C19, complete sequence
          Length = 123794

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 227  tccccggccagccccgccccgccc 250
            |||||| |||||||||||||||||
Sbjct: 4994 tccccgcccagccccgccccgccc 4971
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    gctggtgccggtggcgctgg 403
              ||||||||||||||||||||
Sbjct: 315879 gctggtgccggtggcgctgg 315860
to top
>gb|AC005038.5|AC005038 Homo sapiens BAC clone RP11-486I22 from 1, complete sequence
          Length = 190744

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 227    tccccggccagccccgccccgccc 250
              |||| |||||||||||||||||||
Sbjct: 154341 tcccgggccagccccgccccgccc 154364
to top
>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203418

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 377    caggggtgctggtgccggtg 396
              ||||||||||||||||||||
Sbjct: 175700 caggggtgctggtgccggtg 175681
to top
>gb|AC140838.3| Homo sapiens chromosome 16 clone XXfos-84069G6, complete sequence
          Length = 40546

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   tccccggccagccccgccccgccc 250
             ||||| ||||||||||||||||||
Sbjct: 33970 tccccagccagccccgccccgccc 33947
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 274      gacttcgggttcgaccccctgggcctcg 301
                |||||||| |||||||||||||| ||||
Sbjct: 23304570 gacttcggcttcgaccccctgggtctcg 23304597
to top
>gb|AC140540.3| Homo sapiens chromosome 16 clone XXfos-88730H2, complete sequence
          Length = 38342

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   tccccggccagccccgccccgccc 250
             ||||| ||||||||||||||||||
Sbjct: 32688 tccccagccagccccgccccgccc 32665
to top
>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence
          Length = 179941

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  cggccagccccgccccgccc 250
            ||||||||||||||||||||
Sbjct: 4947 cggccagccccgccccgccc 4966



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  cggccagccccgccccgccc 250
            ||||||||||||||||||||
Sbjct: 4923 cggccagccccgccccgccc 4942



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  cggccagccccgccccgccc 250
            ||||||||||||||||||||
Sbjct: 4899 cggccagccccgccccgccc 4918
to top
>gb|AC087793.17| Homo sapiens chromosome 8, clone RP5-1118A7, complete sequence
          Length = 124060

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   cggccagccccgccccgccc 250
             ||||||||||||||||||||
Sbjct: 84248 cggccagccccgccccgccc 84267
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     tcccggtccggccgctccgg 167
               ||||||||||||||||||||
Sbjct: 4732354 tcccggtccggccgctccgg 4732335
to top
>gb|AC135263.5| Homo sapiens chromosome 15, clone RP13-381O4, complete sequence
          Length = 36235

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    gttcttcttcctgttgttgt 33
             ||||||||||||||||||||
Sbjct: 28936 gttcttcttcctgttgttgt 28917
to top
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1065_B06
          Length = 113170

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 274   gacttcgggttcgaccccctgggcctcg 301
             |||||||| |||||||||||||| ||||
Sbjct: 59828 gacttcggcttcgaccccctgggtctcg 59855
to top
>gb|DQ163915.1| Bacteriophage PA11, complete genome
          Length = 49639

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  acgccaccacctccggccgc 204
            ||||||||||||||||||||
Sbjct: 6603 acgccaccacctccggccgc 6584
to top
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full
           insert sequence
          Length = 1088

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 279 gacttcggcttcgaccccctgggtctcg 306
to top
>emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca4 protein (type 4 protein
           of light-harvesting complex of photosystem I) (partial)
          Length = 968

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 279 cgggttcgaccccctgggcctcgc 302
           ||||||||| ||||||||||||||
Sbjct: 200 cgggttcgatcccctgggcctcgc 223
to top
>emb|X71965.1|CSCAB2MR C.stellata cab2 mRNA for light harvesting complex I chlorophyll
           binding protein
          Length = 1141

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 cactgccgctgggccatgct 368
           ||||||||||||||||||||
Sbjct: 268 cactgccgctgggccatgct 287
to top
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full
           insert sequence
          Length = 1069

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
to top
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full
           insert sequence
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
to top
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full
           insert sequence
          Length = 1080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 295 gacttcggcttcgaccccctgggtctcg 322
to top
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full
           insert sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 261 gacttcggcttcgaccccctgggtctcg 288
to top
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full
           insert sequence
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 264 gacttcggcttcgaccccctgggtctcg 291
to top
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full
           insert sequence
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 258 gacttcggcttcgaccccctgggtctcg 285
to top
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full
           insert sequence
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 259 gacttcggcttcgaccccctgggtctcg 286
to top
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full
           insert sequence
          Length = 1646

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 353 gacttcggcttcgaccccctgggtctcg 380
to top
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full
           insert sequence
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 268 gacttcggcttcgaccccctgggtctcg 295
to top
>gb|AY106111.1| Zea mays PCO074668 mRNA sequence
          Length = 1962

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 110 gcagcgccgtgggcgtgccgagcctgct 137
           ||||||||||||||||| |||| |||||
Sbjct: 293 gcagcgccgtgggcgtggcgaggctgct 266
to top
>emb|CR760965.2| Xenopus tropicalis finished cDNA, clone TEgg028n11
          Length = 2382

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  agcgggctcaggagctgcag 113
           ||||||||||||||||||||
Sbjct: 744 agcgggctcaggagctgcag 763
to top
>gb|AF115765.1|AF115765 Homo sapiens Artemin gene, alternative forms, complete cds
          Length = 1652

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 227 tccccggccagccccgccccgccc 250
           |||| |||||||||||||||||||
Sbjct: 915 tcccgggccagccccgccccgccc 892
to top
>gb|AC005726.1|AC005726 Homo sapiens chromosome 17, clone  hRPK.192_H_23, complete sequence
          Length = 185215

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 227    tccccggccagccccgccccgccc 250
              |||||| |||||||||||||||||
Sbjct: 149804 tccccgcccagccccgccccgccc 149781
to top
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete
           cds
          Length = 1066

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 274 gacttcgggttcgaccccctgggcctcg 301
           |||||||| |||||||||||||| ||||
Sbjct: 235 gacttcggcttcgaccccctgggtctcg 262
to top
>gb|AC087229.27| Mus musculus strain C57BL/6J chromosome 1 clone rp23-191a19, complete
             sequence
          Length = 215043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   ccggtggcgctggggctggg 410
             ||||||||||||||||||||
Sbjct: 15060 ccggtggcgctggggctggg 15041
to top
>emb|Y11740.1|HSY11740 H.sapiens whn gene, exon 1a and 1b
          Length = 13380

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 227  tccccggccagccccgccccgccc 250
            |||||| |||||||||||||||||
Sbjct: 6999 tccccgcccagccccgccccgccc 7022


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,029,136
Number of Sequences: 3902068
Number of extensions: 3029136
Number of successful extensions: 67990
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66943
Number of HSP's gapped (non-prelim): 1042
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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