ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet122f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 42 0.81
2emb|AL590304.2| Human DNA sequence from clone RP11-252B20 on chr... 42 0.81
3emb|Y18063.1|GGA18063 Gallus gallus mRNA for endoplasmic reticul... 42 0.81
4emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome... 42 0.81
5emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 42 0.81
6ref|NM_204891.1| Gallus gallus sarcoendoplasmic reticulum calciu... 42 0.81
7dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 0.81
8ref|NM_102347.1| Arabidopsis thaliana unknown protein AT1G25370 ... 40 3.2
9gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 3.2
10ref|XM_511157.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 3.2
11ref|NM_185048.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.2
12ref|NM_002556.2| Homo sapiens oxysterol binding protein (OSBP), ... 40 3.2
13ref|NM_204308.1| Gallus gallus amyloid beta (A4) precursor prote... 40 3.2
14gb|AY695816.1| Fragaria x ananassa flavonoid 3-O-glucosyltransfe... 40 3.2
15gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 3.2
16ref|XM_361189.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 3.2
17gb|AC158608.10| Mus musculus 10 BAC RP24-405N1 (Roswell Park Can... 40 3.2
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.2
19ref|XR_003390.1| PREDICTED: Mus musculus similar to Glyceraldehy... 40 3.2
20ref|XR_001931.1| PREDICTED: Mus musculus similar to Glyceraldehy... 40 3.2
21gb|AC105429.3| Homo sapiens chromosome 16 clone RP11-106D4, comp... 40 3.2
22ref|XM_540566.2| PREDICTED: Canis familiaris similar to Oxystero... 40 3.2
23gb|AF289219.1| Gallus gallus beta-amyloid precursor protein 751 ... 40 3.2
24gb|AF289218.1| Gallus gallus beta-amyloid precursor protein 695 ... 40 3.2
25gb|BC098388.1| Homo sapiens cDNA clone IMAGE:30528240, containin... 40 3.2
26gb|AC167968.5| Culex pipiens quinquefasciatus, clone Culex pipie... 40 3.2
27emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 40 3.2
28gb|AC008479.6| Homo sapiens chromosome 5 clone CTC-392L24, compl... 40 3.2
29gb|AC008745.7| Homo sapiens chromosome 19 clone CTD-2571L23, com... 40 3.2
30gb|AC112165.2| Homo sapiens chromosome 5 clone CTB-128F12, compl... 40 3.2
31ref|NM_003062.1| Homo sapiens slit homolog 3 (Drosophila) (SLIT3... 40 3.2
32gb|AF185696.1|AF185696 Homo sapiens oxysterol-binding protein 1 ... 40 3.2
33gb|AF185697.1|AF185697S1 Homo sapiens oxysterol binding protein ... 40 3.2
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
35gb|AC079374.4|AC079374 Arabidopsis thaliana chromosome 1 BAC F4F... 40 3.2
36dbj|AB011538.2| Homo sapiens mRNA for MEGF5, partial cds 40 3.2
37gb|AC019184.3| Homo sapiens BAC clone RP11-298E6 from 2, complet... 40 3.2
38gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genom... 40 3.2
39gb|AY084824.1| Arabidopsis thaliana clone 118770 mRNA, complete ... 40 3.2
40dbj|AK024486.1| Homo sapiens mRNA for FLJ00085 protein, partial cds 40 3.2
41emb|AJ325165.1|HSA325165 Homo sapiens genomic sequence surroundi... 40 3.2
42emb|AJ329023.1|HSA329023 Homo sapiens genomic sequence surroundi... 40 3.2
43dbj|AK099211.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.2
44dbj|AK067840.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.2
45dbj|AP000442.6| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 3.2
46gb|M86917.1|HUMOSBPA Human oxysterol-binding protein (OSBP) mRNA... 40 3.2
47dbj|AB017169.1| Homo sapiens mRNA for Slit-3 protein, complete cds 40 3.2 
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 25      cgcagcagctcttcgatctcttcct 49
               |||||||||||||||||||| ||||
Sbjct: 2407945 cgcagcagctcttcgatctcgtcct 2407969



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 208     gggcggcgccggcggccaag 227
               ||||||||||||||||||||
Sbjct: 3929343 gggcggcgccggcggccaag 3929362
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>emb|AL590304.2| Human DNA sequence from clone RP11-252B20 on chromosome 13 Contains a
            spermatogenesis associated 2 (SPATA2) pseudogene,
            complete sequence
          Length = 116874

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 226  agaggcagaggctgagggagg 246
            |||||||||||||||||||||
Sbjct: 3632 agaggcagaggctgagggagg 3652
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>emb|Y18063.1|GGA18063 Gallus gallus mRNA for endoplasmic reticulum calcuim pump
          Length = 3877

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 cgctccgggcggcgccggcgg 222
           |||||||||||||||||||||
Sbjct: 70  cgctccgggcggcgccggcgg 90
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>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13
          Length = 346186

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 25     cgcagcagctcttcgatctcttcct 49
              |||||||||||||||||||| ||||
Sbjct: 330550 cgcagcagctcttcgatctcgtcct 330574
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>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14
          Length = 306050

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 25     cgcagcagctcttcgatctcttcct 49
              |||||||||||||||||||| ||||
Sbjct: 184767 cgcagcagctcttcgatctcgtcct 184791
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>ref|NM_204891.1| Gallus gallus sarcoendoplasmic reticulum calcium ATPase (SERCA),
           mRNA
          Length = 3877

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 202 cgctccgggcggcgccggcgg 222
           |||||||||||||||||||||
Sbjct: 70  cgctccgggcggcgccggcgg 90
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 193     cggaggaggcgctccgggcgg 213
               |||||||||||||||||||||
Sbjct: 2056411 cggaggaggcgctccgggcgg 2056391
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>ref|NM_102347.1| Arabidopsis thaliana unknown protein AT1G25370 mRNA, complete cds
          Length = 1158

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   ctcttcgatcccttcttcgc 27
           ||||||||||||||||||||
Sbjct: 465 ctcttcgatcccttcttcgc 446
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     gcagctcttcgatctcttcc 48
              ||||||||||||||||||||
Sbjct: 657385 gcagctcttcgatctcttcc 657404
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>ref|XM_511157.1| PREDICTED: Pan troglodytes similar to hypothetical protein
            (LOC454299), mRNA
          Length = 3444

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  cggccaagaggcagaggctg 239
            ||||||||||||||||||||
Sbjct: 1050 cggccaagaggcagaggctg 1069
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>ref|NM_185048.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 ggcggcgccggcggccaaga 228
           ||||||||||||||||||||
Sbjct: 856 ggcggcgccggcggccaaga 875
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>ref|NM_002556.2| Homo sapiens oxysterol binding protein (OSBP), mRNA
          Length = 5083

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 412 ggcgctccgggcggcgacggcggc 435
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>ref|NM_204308.1| Gallus gallus amyloid beta (A4) precursor protein (peptidase
           nexin-II, Alzheimer disease) (APP), mRNA
          Length = 3081

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 ccgggcggcgccggcggcca 225
           ||||||||||||||||||||
Sbjct: 156 ccgggcggcgccggcggcca 137
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>gb|AY695816.1| Fragaria x ananassa flavonoid 3-O-glucosyltransferase (FGT) gene,
           complete cds
          Length = 2524

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 7   gctcttcgatcccttcttcg 26
           ||||||||||||||||||||
Sbjct: 447 gctcttcgatcccttcttcg 428
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 198    gaggcgctccgggcggcgccggcggcca 225
              |||||||||||| |||||| ||||||||
Sbjct: 252722 gaggcgctccggtcggcgcgggcggcca 252749
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>ref|XM_361189.1| Magnaporthe grisea 70-15 predicted protein (MG03732.4) partial mRNA
          Length = 471

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 gccaagaggcagaggctgag 241
           ||||||||||||||||||||
Sbjct: 296 gccaagaggcagaggctgag 315
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>gb|AC158608.10| Mus musculus 10 BAC RP24-405N1 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 181588

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    cggaggaggcgctccgggcg 212
              ||||||||||||||||||||
Sbjct: 133242 cggaggaggcgctccgggcg 133223
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 209      ggcggcgccggcggccaaga 228
                ||||||||||||||||||||
Sbjct: 33001522 ggcggcgccggcggccaaga 33001541
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>ref|XR_003390.1| PREDICTED: Mus musculus similar to Glyceraldehyde-3-phosphate
           dehydrogenase (GAPDH) (LOC671350), mRNA
          Length = 1926

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 cggaggaggcgctccgggcg 212
           ||||||||||||||||||||
Sbjct: 618 cggaggaggcgctccgggcg 599
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>ref|XR_001931.1| PREDICTED: Mus musculus similar to Glyceraldehyde-3-phosphate
            dehydrogenase (GAPDH) (LOC666859), mRNA
          Length = 2628

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 193  cggaggaggcgctccgggcg 212
            ||||||||||||||||||||
Sbjct: 1245 cggaggaggcgctccgggcg 1226
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>gb|AC105429.3| Homo sapiens chromosome 16 clone RP11-106D4, complete sequence
          Length = 160582

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   cggccaagaggcagaggctg 239
             ||||||||||||||||||||
Sbjct: 56878 cggccaagaggcagaggctg 56897
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>ref|XM_540566.2| PREDICTED: Canis familiaris similar to Oxysterol-binding protein 1
           (LOC483448), mRNA
          Length = 3533

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 817 ggcgctccgggcggcgacggcggc 840
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>gb|AF289219.1| Gallus gallus beta-amyloid precursor protein 751 isoform mRNA,
           complete cds
          Length = 3081

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 ccgggcggcgccggcggcca 225
           ||||||||||||||||||||
Sbjct: 156 ccgggcggcgccggcggcca 137
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>gb|AF289218.1| Gallus gallus beta-amyloid precursor protein 695 isoform mRNA,
           complete cds
          Length = 2913

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 ccgggcggcgccggcggcca 225
           ||||||||||||||||||||
Sbjct: 156 ccgggcggcgccggcggcca 137
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>gb|BC098388.1| Homo sapiens cDNA clone IMAGE:30528240, containing frame-shift
           errors
          Length = 5303

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 206 ggcgctccgggcggcggcggcggc 183
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>gb|AC167968.5| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940121D9, complete sequence
          Length = 108830

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    cagcagctcttcgatctctt 46
             ||||||||||||||||||||
Sbjct: 85883 cagcagctcttcgatctctt 85902
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>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    gggcggcgccggcggccaag 227
              ||||||||||||||||||||
Sbjct: 118880 gggcggcgccggcggccaag 118899



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    gggcggcgccggcggccaag 227
              ||||||||||||||||||||
Sbjct: 118265 gggcggcgccggcggccaag 118284
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>gb|AC008479.6| Homo sapiens chromosome 5 clone CTC-392L24, complete sequence
          Length = 176691

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 200    ggcgctccgggcggcgccggcggc 223
              |||||||||||||||| |||||||
Sbjct: 145382 ggcgctccgggcggcggcggcggc 145359
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>gb|AC008745.7| Homo sapiens chromosome 19 clone CTD-2571L23, complete sequence
          Length = 180531

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   gaggcagaggctgagggagg 246
             ||||||||||||||||||||
Sbjct: 33080 gaggcagaggctgagggagg 33099
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>gb|AC112165.2| Homo sapiens chromosome 5 clone CTB-128F12, complete sequence
          Length = 113127

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 200   ggcgctccgggcggcgccggcggc 223
             |||||||||||||||| |||||||
Sbjct: 59802 ggcgctccgggcggcggcggcggc 59779
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>ref|NM_003062.1| Homo sapiens slit homolog 3 (Drosophila) (SLIT3), mRNA
          Length = 5015

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 98  ggcgctccgggcggcggcggcggc 75
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>gb|AF185696.1|AF185696 Homo sapiens oxysterol-binding protein 1 (OSBP1) mRNA, complete cds
          Length = 5084

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 412 ggcgctccgggcggcgacggcggc 435
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>gb|AF185697.1|AF185697S1 Homo sapiens oxysterol binding protein 1 (OSBP1) gene, exon 1
          Length = 1405

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 540 ggcgctccgggcggcgacggcggc 563
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 209      ggcggcgccggcggccaaga 228
                ||||||||||||||||||||
Sbjct: 33092032 ggcggcgccggcggccaaga 33092051
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>gb|AC079374.4|AC079374 Arabidopsis thaliana chromosome 1 BAC F4F7 genomic sequence, complete
            sequence
          Length = 89690

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    ctcttcgatcccttcttcgc 27
            ||||||||||||||||||||
Sbjct: 8011 ctcttcgatcccttcttcgc 7992
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>dbj|AB011538.2| Homo sapiens mRNA for MEGF5, partial cds
          Length = 5156

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 255 ggcgctccgggcggcggcggcggc 232
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>gb|AC019184.3| Homo sapiens BAC clone RP11-298E6 from 2, complete sequence
          Length = 194372

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   ccaagaggcagaggctgagg 242
             ||||||||||||||||||||
Sbjct: 28300 ccaagaggcagaggctgagg 28319
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>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete
              sequence
          Length = 139823

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    ggcggcgccggcggccaaga 228
              ||||||||||||||||||||
Sbjct: 121786 ggcggcgccggcggccaaga 121767
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>gb|AY084824.1| Arabidopsis thaliana clone 118770 mRNA, complete sequence
          Length = 1158

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   ctcttcgatcccttcttcgc 27
           ||||||||||||||||||||
Sbjct: 465 ctcttcgatcccttcttcgc 446
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>dbj|AK024486.1| Homo sapiens mRNA for FLJ00085 protein, partial cds
          Length = 4186

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 227  gaggcagaggctgagggagg 246
            ||||||||||||||||||||
Sbjct: 1019 gaggcagaggctgagggagg 1038
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>emb|AJ325165.1|HSA325165 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-CG22C
          Length = 527

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 177 ggcgctccgggcggcgacggcggc 154
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>emb|AJ329023.1|HSA329023 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-FE17C
          Length = 666

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 177 ggcgctccgggcggcgacggcggc 154
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>dbj|AK099211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E13, full
           insert sequence
          Length = 1328

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 ggcggcgccggcggccaaga 228
           ||||||||||||||||||||
Sbjct: 871 ggcggcgccggcggccaaga 890
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>dbj|AK067840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128M09, full
           insert sequence
          Length = 1389

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 ggcggcgccggcggccaaga 228
           ||||||||||||||||||||
Sbjct: 871 ggcggcgccggcggccaaga 890
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>dbj|AP000442.6| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-60A24, complete
             sequence
          Length = 117502

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 200   ggcgctccgggcggcgccggcggc 223
             |||||||||||||||| |||||||
Sbjct: 57348 ggcgctccgggcggcgacggcggc 57325
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>gb|M86917.1|HUMOSBPA Human oxysterol-binding protein (OSBP) mRNA, complete cds
          Length = 2997

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 412 ggcgctccgggcggcgacggcggc 435
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>dbj|AB017169.1| Homo sapiens mRNA for Slit-3 protein, complete cds
          Length = 5015

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ggcgctccgggcggcgccggcggc 223
           |||||||||||||||| |||||||
Sbjct: 98  ggcgctccgggcggcggcggcggc 75


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,760,008
Number of Sequences: 3902068
Number of extensions: 1760008
Number of successful extensions: 55518
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54896
Number of HSP's gapped (non-prelim): 622
length of query: 249
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 227
effective length of database: 17,147,199,772
effective search space: 3892414348244
effective search space used: 3892414348244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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