ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet122e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, ch... 233 1e-65
2PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, ch... 154 1e-37
3PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, ch... 153 3e-37
4PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, ch... 152 6e-37
5PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PS... 96 7e-20
6PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PS... 94 2e-19
7PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PS... 94 2e-19
8PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PS... 93 3e-19
9PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PS... 93 3e-19
10PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PS... 92 6e-19
11PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PS... 92 1e-18
12PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PS... 91 1e-18
13PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PS... 90 3e-18
14PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PS... 90 3e-18
15PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PS... 89 5e-18
16PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PS... 89 9e-18
17PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PS... 88 1e-17
18PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PS... 75 1e-13
19PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PS... 75 1e-13
20PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PS... 73 5e-13
21PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PS... 72 1e-12
22PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PS... 68 2e-11
23PSAL_SYNVU (P25937) Photosystem I reaction center subunit XI (PS... 32 0.73
24DUS_RHOCA (Q08111) Probable tRNA-dihydrouridine synthase (EC 1.-... 31 1.6
25SYI_WOLPM (Q73HW7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 30 3.6
26PUTP_SALTY (P10502) Sodium/proline symporter (Proline permease) 30 4.7
27SLC31_HUMAN (Q07837) Neutral and basic amino acid transport prot... 30 4.7
28TRPA_SULAC (Q4J8X8) Tryptophan synthase alpha chain (EC 4.2.1.20) 29 6.2
29RNF41_BRARE (Q7ZW16) RING finger protein 41 29 8.1
30GLMM_XANAC (Q8PJ31) Phosphoglucosamine mutase (EC 5.4.2.10) 29 8.1
31PDXJ_SILPO (Q3V7J3) Pyridoxal phosphate biosynthetic protein pdx... 29 8.1
32LDHB_BRARE (Q9PVK4) L-lactate dehydrogenase B chain (EC 1.1.1.27... 29 8.1

>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 209

 Score =  233 bits (594), Expect(2) = 1e-65
 Identities = 115/119 (96%), Positives = 116/119 (97%)
 Frame = +1

Query: 79  MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQLVQPINGDPF 258
           MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQ+VQPINGDPF
Sbjct: 1   MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF 60

Query: 259 IGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFALTGPLRTRP 435
           IGSLETPVTSSPLVAWYLSNLPAYR AVSPLLRGIEVGLAHGYLLVGPFALTGPLR  P
Sbjct: 61  IGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTP 119



 Score = 36.2 bits (82), Expect(2) = 1e-65
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 429 TPVHGQAGTLGVIGLVS 479
           TPVHGQAGTLG IGLVS
Sbjct: 118 TPVHGQAGTLGAIGLVS 134



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>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 216

 Score =  154 bits (390), Expect = 1e-37
 Identities = 79/122 (64%), Positives = 94/122 (77%), Gaps = 9/122 (7%)
 Frame = +1

Query: 88  AYAPPMASQVMKSGL---ACSKPRGMSGASLT------RRPRFVVKAVKSDKPTYQLVQP 240
           A   PMASQ +KSG    A   P+G+SG +L       R   F V+A+K++KPTYQ++QP
Sbjct: 3   ATTSPMASQ-LKSGFTTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQP 61

Query: 241 INGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFALTGP 420
           +NGDPFIG LETPVTSSPL+AWYLSNLPAYR AV+PLLRG+EVGLAHG+LLVGPF   GP
Sbjct: 62  LNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGP 121

Query: 421 LR 426
           LR
Sbjct: 122 LR 123



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>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 217

 Score =  153 bits (386), Expect = 3e-37
 Identities = 79/125 (63%), Positives = 96/125 (76%), Gaps = 9/125 (7%)
 Frame = +1

Query: 79  MATAYAPPMASQVMKSGLACS-----KPRGMSGASLTRRPR----FVVKAVKSDKPTYQL 231
           MATA +P  ASQ+  S  + +      P+G+S + L R P     F ++A+++DKPT+Q+
Sbjct: 1   MATATSPT-ASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQV 59

Query: 232 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFAL 411
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYR AVSPLLRGIEVGLAHG+ LVGPF  
Sbjct: 60  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 119

Query: 412 TGPLR 426
            GPLR
Sbjct: 120 AGPLR 124



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>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 219

 Score =  152 bits (383), Expect = 6e-37
 Identities = 82/124 (66%), Positives = 94/124 (75%), Gaps = 11/124 (8%)
 Frame = +1

Query: 88  AYAPPMASQVMKSGLACSK------PRGMSGA----SLTRR-PRFVVKAVKSDKPTYQLV 234
           A A PMASQ+  S  + S       P+G+SGA    S T+R   F V+AVKSDK T+Q+V
Sbjct: 3   ASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVV 62

Query: 235 QPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFALT 414
           QPINGDPFIGSLETPVTSSPL+AWYLSNLP YR AV+PLLRG+EVGLAHG+ LVGPF   
Sbjct: 63  QPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKA 122

Query: 415 GPLR 426
           GPLR
Sbjct: 123 GPLR 126



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>PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 147

 Score = 95.5 bits (236), Expect = 7e-20
 Identities = 40/70 (57%), Positives = 52/70 (74%)
 Frame = +1

Query: 226 QLVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPF 405
           + V+P N DPF+G+L TPVT+S     YL NLP YR  ++PLLRG+E+G+AHGY L+GPF
Sbjct: 5   EFVKPFNNDPFVGNLSTPVTTSTATKLYLGNLPIYRKGLTPLLRGLEIGMAHGYFLIGPF 64

Query: 406 ALTGPLRTRP 435
            + GPLR  P
Sbjct: 65  YILGPLRNSP 74



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>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 155

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = +1

Query: 226 QLVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPF 405
           +LV+P NGDPF+G L TP++ S LV  ++ NLPAYR  +SP+LRG+EVG+AHGY L+GP+
Sbjct: 4   ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPW 63

Query: 406 ALTGPLR 426
              GPLR
Sbjct: 64  VKLGPLR 70



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>PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 152

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 42/67 (62%), Positives = 51/67 (76%)
 Frame = +1

Query: 226 QLVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPF 405
           Q V+P N DPF+G+L TP+T+S      LSNLPAYRA +SPLLRG+E+G+ HGY LVGPF
Sbjct: 3   QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPF 62

Query: 406 ALTGPLR 426
              GPLR
Sbjct: 63  YKLGPLR 69



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>PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 172

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = +1

Query: 196 KAVKSDKPTYQLVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGL 375
           K + SD    ++V P   DP  G+LETPV +SPLV W+++NLPAYR  ++P  RG+EVG+
Sbjct: 9   KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68

Query: 376 AHGYLLVGPFALTGPLR 426
           AHGY L GPFA  GPLR
Sbjct: 69  AHGYFLFGPFAKLGPLR 85



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>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 172

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = +1

Query: 196 KAVKSDKPTYQLVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGL 375
           K + SD    ++V P   DP  G+LETPV +SPLV W+++NLPAYR  ++P  RG+EVG+
Sbjct: 9   KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGM 68

Query: 376 AHGYLLVGPFALTGPLR 426
           AHGY L GPFA  GPLR
Sbjct: 69  AHGYFLFGPFAKLGPLR 85



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>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 157

 Score = 92.4 bits (228), Expect = 6e-19
 Identities = 39/67 (58%), Positives = 51/67 (76%)
 Frame = +1

Query: 226 QLVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPF 405
           Q+VQ  NGDPF+G L TP++ S     ++ NLPAYR  +SP+LRG+EVG+AHGY L+GP+
Sbjct: 6   QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPW 65

Query: 406 ALTGPLR 426
            L GPLR
Sbjct: 66  TLLGPLR 72



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>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 148

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 39/67 (58%), Positives = 52/67 (77%)
 Frame = +1

Query: 226 QLVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPF 405
           +LV+P NGDPF+G L TP++ S LV  ++ NLPAYR  +SP+L G+EVG+AHGY L+GP+
Sbjct: 3   ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPW 62

Query: 406 ALTGPLR 426
              GPLR
Sbjct: 63  VKLGPLR 69



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>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 152

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 37/65 (56%), Positives = 49/65 (75%)
 Frame = +1

Query: 232 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFAL 411
           ++P   +PF+G+L TPV SS +  WYL NLP YR  +SPLLRG+E+G+AHGY ++GPF  
Sbjct: 5   IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYK 64

Query: 412 TGPLR 426
            GPLR
Sbjct: 65  LGPLR 69



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>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 173

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 41/73 (56%), Positives = 51/73 (69%)
 Frame = +1

Query: 208 SDKPTYQLVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGY 387
           SD    ++V P   DP IG LETP+ SSPLV W++ NLPAYR  ++   RG+EVG+AHGY
Sbjct: 13  SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGY 72

Query: 388 LLVGPFALTGPLR 426
            + GPFA  GPLR
Sbjct: 73  WIFGPFAKLGPLR 85



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>PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 140

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = +1

Query: 232 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFAL 411
           ++P N DPF+G L TP+ SS L   YLS LP YR  VSP LRG+E+G+AHGY L+GPF  
Sbjct: 5   IKPYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQ 64

Query: 412 TGPLR 426
            GPLR
Sbjct: 65  LGPLR 69



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>PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 150

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 39/65 (60%), Positives = 49/65 (75%)
 Frame = +1

Query: 232 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFAL 411
           ++P N DPF+G L TP+TSS +    L NLPAYR  ++PLLRG+E+GLAHGY L+GPF  
Sbjct: 5   IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVK 64

Query: 412 TGPLR 426
            GPLR
Sbjct: 65  LGPLR 69



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>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 153

 Score = 88.6 bits (218), Expect = 9e-18
 Identities = 38/67 (56%), Positives = 50/67 (74%)
 Frame = +1

Query: 226 QLVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPF 405
           + ++P N DPF+G+L TPV++S      L NLPAYR  +SPLLRG+E+G+AHGY L+GPF
Sbjct: 3   EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPF 62

Query: 406 ALTGPLR 426
              GPLR
Sbjct: 63  DKLGPLR 69



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>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 150

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 39/65 (60%), Positives = 49/65 (75%)
 Frame = +1

Query: 232 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFAL 411
           +Q  N DPF+G+L TPV++S      L+NLPAYR  +SPLLRG+E+G+AHGY LVGPF  
Sbjct: 5   IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDK 64

Query: 412 TGPLR 426
            GPLR
Sbjct: 65  LGPLR 69



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>PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 199

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = +1

Query: 232 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFAL 411
           V P++ DP +G+L TPV S      +L+NLP YR  +SP  RG+EVG A GYLL GP+A+
Sbjct: 39  VTPVS-DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAM 97

Query: 412 TGPLR 426
           TGPLR
Sbjct: 98  TGPLR 102



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>PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 152

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = +1

Query: 247 GDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 426
           GDP +G+L TP+ +S     +++NLP YR  +S   RG+EVG+AHGY L GPFAL GPLR
Sbjct: 8   GDPQVGNLATPINASAFSKAFINNLPGYRQGLSAQRRGLEVGMAHGYFLYGPFALLGPLR 67



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>PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 147

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 31/59 (52%), Positives = 41/59 (69%)
 Frame = +1

Query: 250 DPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 426
           DP  G+L TPV +S  + W++ NLP  R  +    RG+E+G+AHGY L+GPFAL GPLR
Sbjct: 11  DPQEGTLLTPVNNSTAIRWFIDNLPINRVGMDEFTRGLEIGMAHGYWLIGPFALLGPLR 69



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>PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 166

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 31/60 (51%), Positives = 43/60 (71%)
 Frame = +1

Query: 247 GDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 426
           G P IG+L TP+ SSP    +++ LP YR  +S   RG+E+G+AHG+LL GPF++ GPLR
Sbjct: 10  GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLR 69



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>PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 165

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 30/60 (50%), Positives = 40/60 (66%)
 Frame = +1

Query: 247 GDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHGYLLVGPFALTGPLR 426
           G P IG L TP  SSP    +++ LP YR  +S   RG+E+G+AHG+LL GP ++ GPLR
Sbjct: 9   GTPEIGDLATPTNSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPLSILGPLR 68



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>PSAL_SYNVU (P25937) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V) (Fragment)
          Length = 20

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +1

Query: 226 QLVQPINGDPFIGSLETP 279
           +LV+P NGDPF+G L TP
Sbjct: 3   ELVKPYNGDPFVGHLSTP 20



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>DUS_RHOCA (Q08111) Probable tRNA-dihydrouridine synthase (EC 1.-.-.-)|
           (Nitrogen regulation protein nifR3)
          Length = 324

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
 Frame = +1

Query: 103 MASQVMKSGLACSKPR---GMSGASLTRRPRFVVKAVKSDKPTYQLVQPINGDPFIGSLE 273
           M ++++   + C   +   G+SGA+L R P   ++ +++                +G+++
Sbjct: 92  MGAEIIDINMGCPAKKVTGGLSGAALMRNPDHALRLIEA---------------VVGAVD 136

Query: 274 TPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVGLAHG 384
            PVT    + W    L A   A      G+++ + HG
Sbjct: 137 LPVTLKMRLGWDEDQLNAAEIAARAEAAGVKMIVIHG 173



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>SYI_WOLPM (Q73HW7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1111

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 18/97 (18%), Positives = 41/97 (42%)
 Frame = +1

Query: 25  DAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAV 204
           D  G    +    +ED  +  ++  P+   +  SG   ++   ++G  +      V+K +
Sbjct: 365 DGTGVVHTAPGFGEEDFYLCQSHDIPVICPIDNSGKFTAEVSDLAGVHVFDANDTVIKKL 424

Query: 205 KSDKPTYQLVQPINGDPFIGSLETPVTSSPLVAWYLS 315
           K     ++  Q I+  P     +TP+    + +WY++
Sbjct: 425 KGQGSWFKTEQYIHNYPHCWRTDTPLIYRTMPSWYVA 461



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>PUTP_SALTY (P10502) Sodium/proline symporter (Proline permease)|
          Length = 502

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 22/75 (29%), Positives = 30/75 (40%)
 Frame = -3

Query: 245 LMGWTNWYVGLSDLTALTTKRGLRVSEAPDMPRGLEHAKPLFITWLAMGGAYAVAISMSS 66
           LMGW   Y G   + A           A D    + HA+ + +TW+ +  A AVA+    
Sbjct: 241 LMGWGLGYFGQPHILARFM--------AADSHHSIVHARRISMTWMILCLAGAVAVGFFG 292

Query: 65  FDSHTLNSALPAASN 21
                 N AL  A N
Sbjct: 293 IAYFNNNPALAGAVN 307



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>SLC31_HUMAN (Q07837) Neutral and basic amino acid transport protein rBAT|
           (B(0,+)-type amino acid transport protein) (NBAT) (D2H)
          Length = 685

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
 Frame = -3

Query: 260 MNGSPLMGWTNWYVGLSDLTALTTKRGLRVSEAPDMPRGLEHAKPLFITWLAMGGAYAVA 81
           M   P   W NW +G  D + LT++ G +     +M        P+      +G    VA
Sbjct: 432 MENMPEGKWPNWMIGGPDSSRLTSRLGNQYVNVMNMLLFTLPGTPITYYGEEIGMGNIVA 491

Query: 80  ISMS-SFDSHTLNSALP------------AASNGWM 12
            +++ S+D +TL S  P             ASN W+
Sbjct: 492 ANLNESYDINTLRSKSPMQWDNSSNAGFSEASNTWL 527



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>TRPA_SULAC (Q4J8X8) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 245

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +1

Query: 214 KPTYQLVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRAAVSPLLRGIEVG 372
           +PT  +V PI+ D  I  + T V S  +V + L+++   + A+S    GI VG
Sbjct: 164 RPTTGVVIPISIDSLINRIRTMVQSKLVVGFGLNSIEDIKKAMSVGADGIAVG 216



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>RNF41_BRARE (Q7ZW16) RING finger protein 41|
          Length = 318

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -2

Query: 93  ICSGHLDVLLRLPHAQ--LCSACSVKW 19
           ICSG L+  +R PH +   C+AC  +W
Sbjct: 20  ICSGVLEEPVRAPHCEHAFCNACITQW 46



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>GLMM_XANAC (Q8PJ31) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 449

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +3

Query: 36  QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAGHVRR 164
           Q+ VE  G  GG   GH +C      GD     L VL+A G  R+
Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRASTGDGIVSALQVLEALGRDRQ 359



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>PDXJ_SILPO (Q3V7J3) Pyridoxal phosphate biosynthetic protein pdxJ (PNP|
           synthase)
          Length = 248

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 84  HCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGCQV 209
           H +C    +  +    G L+ A    R AH  APLR  GC+V
Sbjct: 91  HAVCIVPEKREERTTEGGLEVAREENRLAHFIAPLREVGCRV 132



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>LDHB_BRARE (Q9PVK4) L-lactate dehydrogenase B chain (EC 1.1.1.27) (LDH-B)|
          Length = 333

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 245 LMGWTNWYVGLS--DLTALTTKRGLRVSEAPDMPRGL 141
           L G+TNW +GLS  DLT    K   RV     M +G+
Sbjct: 244 LKGYTNWAIGLSVADLTETLVKNLNRVHPVSTMVKGM 280


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,919,701
Number of Sequences: 219361
Number of extensions: 1049857
Number of successful extensions: 3829
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3824
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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