| Clone Name | baet122b08 |
|---|---|
| Clone Library Name | barley_pub |
>MT3_MUSAC (Q40256) Metallothionein-like protein type 3 (MT-3) (MWMT3)| Length = 65 Score = 63.5 bits (153), Expect = 3e-10 Identities = 27/39 (69%), Positives = 30/39 (76%) Frame = +2 Query: 89 CGNCDCADKSQCVKKGTSYGVVIVEAEKSHFEEVAAGEE 205 CGNCDC DKSQCVKKG SYG+ IVE EKS+ +EV E Sbjct: 4 CGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVAAE 42
>MT3_ACTCH (P43389) Metallothionein-like protein type 3 PKIWI503| Length = 63 Score = 60.8 bits (146), Expect = 2e-09 Identities = 28/41 (68%), Positives = 32/41 (78%) Frame = +2 Query: 77 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFEEVAAG 199 MSDKCGNCDCAD SQCVKKG S + IVE +KS+ E+V G Sbjct: 1 MSDKCGNCDCADSSQCVKKGNS--IDIVETDKSYIEDVVMG 39
>MT3_CARPA (Q96386) Metallothionein-like protein type 3 (MT-3)| Length = 65 Score = 59.3 bits (142), Expect = 5e-09 Identities = 25/33 (75%), Positives = 28/33 (84%) Frame = +2 Query: 77 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKS 175 MSD CGNCDCADK+QCVKKG+SY I+E EKS Sbjct: 1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKS 33
>MT3_MALDO (O24059) Metallothionein-like protein type 3 (MT-3)| Length = 66 Score = 55.5 bits (132), Expect = 8e-08 Identities = 24/38 (63%), Positives = 27/38 (71%) Frame = +2 Query: 77 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFEEV 190 MS KC NCDCAD +QCVKKG SY +VIVE E + V Sbjct: 1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTV 38
>MT3_PRUAV (O48951) Metallothionein-like protein 1 (MT-1)| Length = 64 Score = 52.4 bits (124), Expect = 7e-07 Identities = 22/38 (57%), Positives = 26/38 (68%) Frame = +2 Query: 77 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFEEV 190 MS KC NCDC+D SQC KKG S+ +VIVE E + V Sbjct: 1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTV 38
>MT3_PICGL (Q40854) Metallothionein-like protein EMB30| Length = 60 Score = 46.6 bits (109), Expect = 4e-05 Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +2 Query: 77 MSDKCGNCDCADKSQCVKKGTSY-GVVIVEAEKSHFEEVA 193 MS CGNCDCADKSQC KKG G+V E H +V+ Sbjct: 1 MSSDCGNCDCADKSQCTKKGFQIDGIVETSYEMGHGGDVS 40
>ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor| Length = 1470 Score = 30.4 bits (67), Expect = 2.7 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = -3 Query: 258 PHLQSV--QEQLVPHLQPPFSSPAATSSKWLFSASTMTTP 145 PH Q V +E LVP+ +P F SP SS S+ T P Sbjct: 1398 PHKQGVGSEESLVPYSKPSFPSPGGHSSSGTSSSKGSTGP 1437
>LAB_DROME (P10105) Homeotic protein labial (F24) (F90-2)| Length = 635 Score = 30.0 bits (66), Expect = 3.5 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = -3 Query: 375 FSNNQHTHKPHSYGWFLLWTN*GR*LAGGECSVAS*LHLPHLQSVQEQLVPHLQPP 208 + N+ H H PH+ + T A A H PHLQ Q+Q HLQ P Sbjct: 8 YGNHPHHHHPHANAYDGYSTTTAS-AANASSYFAPQQHQPHLQLQQQQQHQHLQQP 62
>DDL_RHIME (Q92NM4) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 308 Score = 28.9 bits (63), Expect = 7.7 Identities = 12/27 (44%), Positives = 20/27 (74%) Frame = +2 Query: 125 VKKGTSYGVVIVEAEKSHFEEVAAGEE 205 V++G+S+GVVIV+ ++SH +V E Sbjct: 138 VREGSSFGVVIVKEDQSHPPQVITSSE 164
>GATA4_ARATH (O49743) GATA transcription factor 4 (AtGATA-4)| Length = 240 Score = 28.9 bits (63), Expect = 7.7 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -3 Query: 204 SSPAATSSKWLFSASTMTTP*LVPFFTHWLLSAQSQLPH---LSDMVEDLIS 58 SS A++ + + F +ST T+P L+ FTH L H LS V+D S Sbjct: 38 SSAASSENPFSFPSSTYTSPTLLTDFTHDLCVPSDDAAHLEWLSRFVDDSFS 89 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,569,416 Number of Sequences: 219361 Number of extensions: 877128 Number of successful extensions: 2277 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2216 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2277 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)