ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet120h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483583.1| Oryza sativa (japonica cultivar-group), mRNA 182 7e-43
2dbj|AK120995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 1e-41
3dbj|AK072458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
5dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
7dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
8dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
9gb|AC020641.8| Homo sapiens chromosome 10 clone RP11-222A11, com... 44 0.41
10gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.6
11gb|AF083210.1| Cercopithecine herpesvirus 1 strain E2490 glycopr... 42 1.6
12gb|AF082808.1| Cercopithecine herpesvirus 1 strain 12930 glycopr... 42 1.6
13gb|AF082806.1| Cercopithecine herpesvirus 1 strain 16293 glycopr... 42 1.6
14gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 42 1.6
15dbj|AB074432.1| Cercopithecine herpesvirus 1 US1, US2, US3, US4,... 42 1.6
16ref|XM_582013.2| PREDICTED: Bos taurus similar to Ladinin 1 (Lad... 40 6.3
17ref|XM_607425.2| PREDICTED: Bos taurus similar to CG11909-PA (LO... 40 6.3
18gb|AC125054.4| Mus musculus BAC clone RP23-389M1 from chromosome... 40 6.3
19gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, co... 40 6.3
20emb|AL121910.26|HSDJ827L5 Human DNA sequence from clone RP5-827L... 40 6.3
21ref|XM_964956.1| PREDICTED: Tribolium castaneum similar to trans... 40 6.3
22gb|AC022399.15| Homo sapiens chromosome 10 clone RP11-4G18, comp... 40 6.3
23gb|AC080106.6| Homo sapiens chromosome 11, clone RP11-62J13, com... 40 6.3
24gb|AF285236.1|AF285236 Pan troglodytes glucocerebrosidase (GBA) ... 40 6.3
25emb|AL773508.6| Mouse DNA sequence from clone RP23-253D15 on chr... 40 6.3
26dbj|AP000893.5| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.3 
>ref|XM_483583.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2202

 Score =  182 bits (92), Expect = 7e-43
 Identities = 164/188 (87%)
 Strand = Plus / Plus

                                                                        
Query: 7    tcacttgccaaattaggaaaggagcttctgaagtacagagaatcggcacaggtggctgct 66
            |||||||| |||||||| |||||||||||||||||||| ||  | |||||  ||||||||
Sbjct: 1201 tcacttgctaaattagggaaggagcttctgaagtacagggatgcagcacaaatggctgct 1260

                                                                        
Query: 67   gttgaagccatgcaggaagcttctgctgcagaaagcttgctgagatgtttgagctcgtac 126
            |||||||| ||||||||||||||||||||||| | ||||||  ||||||| |||||||||
Sbjct: 1261 gttgaagctatgcaggaagcttctgctgcagagaacttgcttcgatgtttaagctcgtac 1320

                                                                        
Query: 127  gccgaggtgagctcaacggcagaggagcaaaacccgcagccgactgttgagcagttcctc 186
            || ||||||||||| ||||| |||||||| |||||||||||| | || ||||| ||||| 
Sbjct: 1321 gcggaggtgagctcgacggcggaggagcagaacccgcagccggcggtggagcaattcctg 1380

                    
Query: 187  gccctcca 194
            || |||||
Sbjct: 1381 gctctcca 1388
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>dbj|AK120995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043P11, full
            insert sequence
          Length = 2885

 Score =  178 bits (90), Expect = 1e-41
 Identities = 144/162 (88%)
 Strand = Plus / Plus

                                                                        
Query: 7    tcacttgccaaattaggaaaggagcttctgaagtacagagaatcggcacaggtggctgct 66
            |||||||| |||||||| |||||||||||||||||||| ||  | |||||  ||||||||
Sbjct: 1593 tcacttgctaaattagggaaggagcttctgaagtacagggatgcagcacaaatggctgct 1652

                                                                        
Query: 67   gttgaagccatgcaggaagcttctgctgcagaaagcttgctgagatgtttgagctcgtac 126
            |||||||| ||||||||||||||||||||||| | ||||||  ||||||| |||||||||
Sbjct: 1653 gttgaagctatgcaggaagcttctgctgcagagaacttgcttcgatgtttaagctcgtac 1712

                                                      
Query: 127  gccgaggtgagctcaacggcagaggagcaaaacccgcagccg 168
            || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 1713 gcggaggtgagctcgacggcggaggagcagaacccgcagccg 1754
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>dbj|AK072458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121E21, full
            insert sequence
          Length = 4525

 Score =  129 bits (65), Expect = 9e-27
 Identities = 101/113 (89%)
 Strand = Plus / Plus

                                                                        
Query: 7    tcacttgccaaattaggaaaggagcttctgaagtacagagaatcggcacaggtggctgct 66
            ||||| |||||||||||||||||||| ||||| || || || || |||||  ||||||||
Sbjct: 1702 tcactcgccaaattaggaaaggagctcctgaaatatagggagtcagcacaaatggctgct 1761

                                                                 
Query: 67   gttgaagccatgcaggaagcttctgctgcagaaagcttgctgagatgtttgag 119
            ||||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 1762 gttgaagccattcaggaagcttctgctgcagagagcttgctcagatgtttgag 1814



 Score =  113 bits (57), Expect = 5e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                        
Query: 118  agctcgtacgccgaggtgagctcaacggcagaggagcaaaacccgcagccgactgttgag 177
            ||||||||||| ||||||||||| ||||| |||||||| |||||||||||| | || |||
Sbjct: 3263 agctcgtacgcggaggtgagctcgacggcggaggagcagaacccgcagccggcggtcgag 3322

                                                                     
Query: 178  cagttcctcgccctccacagctcgcttacccgtgccacggtgatcactgacaccctc 234
            | ||||||||||||||||| | ||||  |||| ||| |||||||||| |||||||||
Sbjct: 3323 cggttcctcgccctccacaccgcgctgtcccgcgccgcggtgatcaccgacaccctc 3379



 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                        
Query: 351  gtcctgggttaacgccgcgctcgccacggacctctctggcttcgggctctacaacctcaa 410
            ||||||||| | ||||||||| |||||||||||||| | |||||| ||||||||||| ||
Sbjct: 3505 gtcctgggtgagcgccgcgcttgccacggacctctccgccttcggcctctacaaccttaa 3564

                                                                    
Query: 411  gccggtcccggccacggtgtcatcgccgctggcggtggtcgtcgttgatgagtcgg 466
            |||||||||||| ||| | || || |||||||| ||| |||||||||| |||||||
Sbjct: 3565 gccggtcccggcgacgatctcgtcaccgctggccgtgctcgtcgttgacgagtcgg 3620
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  113 bits (57), Expect = 5e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                            
Query: 118      agctcgtacgccgaggtgagctcaacggcagaggagcaaaacccgcagccgactgttgag 177
                ||||||||||| ||||||||||| ||||| |||||||| |||||||||||| | || |||
Sbjct: 19834397 agctcgtacgcggaggtgagctcgacggcggaggagcagaacccgcagccggcggtcgag 19834338

                                                                         
Query: 178      cagttcctcgccctccacagctcgcttacccgtgccacggtgatcactgacaccctc 234
                | ||||||||||||||||| | ||||  |||| ||| |||||||||| |||||||||
Sbjct: 19834337 cggttcctcgccctccacaccgcgctgtcccgcgccgcggtgatcaccgacaccctc 19834281



 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                            
Query: 351      gtcctgggttaacgccgcgctcgccacggacctctctggcttcgggctctacaacctcaa 410
                ||||||||| | ||||||||| |||||||||||||| | |||||| ||||||||||| ||
Sbjct: 19834155 gtcctgggtgagcgccgcgcttgccacggacctctccgccttcggcctctacaaccttaa 19834096

                                                                        
Query: 411      gccggtcccggccacggtgtcatcgccgctggcggtggtcgtcgttgatgagtcgg 466
                |||||||||||| ||| | || || |||||||| ||| |||||||||| |||||||
Sbjct: 19834095 gccggtcccggcgacgatctcgtcaccgctggccgtgctcgtcgttgacgagtcgg 19834040



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                            
Query: 26       aggagcttctgaagtacagagaatcggcacaggtggctgctgttgaagccatgcaggaag 85
                ||||||| ||||| || || || || |||||  ||||||||||||||||||| |||||||
Sbjct: 19835939 aggagctcctgaaatatagggagtcagcacaaatggctgctgttgaagccattcaggaag 19835880

                                                  
Query: 86       cttctgctgcagaaagcttgctgagatgtttgag 119
                ||||||||||||| |||||||| |||||||||||
Sbjct: 19835879 cttctgctgcagagagcttgctcagatgtttgag 19835846
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>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score =  113 bits (57), Expect = 5e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                         
Query: 118   agctcgtacgccgaggtgagctcaacggcagaggagcaaaacccgcagccgactgttgag 177
             ||||||||||| ||||||||||| ||||| |||||||| |||||||||||| | || |||
Sbjct: 58837 agctcgtacgcggaggtgagctcgacggcggaggagcagaacccgcagccggcggtcgag 58778

                                                                      
Query: 178   cagttcctcgccctccacagctcgcttacccgtgccacggtgatcactgacaccctc 234
             | ||||||||||||||||| | ||||  |||| ||| |||||||||| |||||||||
Sbjct: 58777 cggttcctcgccctccacaccgcgctgtcccgcgccgcggtgatcaccgacaccctc 58721



 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                         
Query: 351   gtcctgggttaacgccgcgctcgccacggacctctctggcttcgggctctacaacctcaa 410
             ||||||||| | ||||||||| |||||||||||||| | |||||| ||||||||||| ||
Sbjct: 58595 gtcctgggtgagcgccgcgcttgccacggacctctccgccttcggcctctacaaccttaa 58536

                                                                     
Query: 411   gccggtcccggccacggtgtcatcgccgctggcggtggtcgtcgttgatgagtcgg 466
             |||||||||||| ||| | || || |||||||| ||| |||||||||| |||||||
Sbjct: 58535 gccggtcccggcgacgatctcgtcaccgctggccgtgctcgtcgttgacgagtcgg 58480



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                         
Query: 26    aggagcttctgaagtacagagaatcggcacaggtggctgctgttgaagccatgcaggaag 85
             ||||||| ||||| || || || || |||||  ||||||||||||||||||| |||||||
Sbjct: 60379 aggagctcctgaaatatagggagtcagcacaaatggctgctgttgaagccattcaggaag 60320

                                               
Query: 86    cttctgctgcagaaagcttgctgagatgtttgag 119
             ||||||||||||| |||||||| |||||||||||
Sbjct: 60319 cttctgctgcagagagcttgctcagatgtttgag 60286
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                            
Query: 26       aggagcttctgaagtacagagaatcggcacaggtggctgctgttgaagccatgcaggaag 85
                ||||||||||||||||||| ||  | |||||  |||||||||||||||| ||||||||||
Sbjct: 27099024 aggagcttctgaagtacagggatgcagcacaaatggctgctgttgaagctatgcaggaag 27098965

                                               
Query: 86       cttctgctgcagaaagcttgctgagatgttt 116
                ||||||||||||| | ||||||  |||||||
Sbjct: 27098964 cttctgctgcagagaacttgcttcgatgttt 27098934



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 118      agctcgtacgccgaggtgagctcaacggcagaggagcaaaacccgcagccgactgttgag 177
                ||||||||||| ||||||||||| ||||| |||||||| |||||||||||| | || |||
Sbjct: 27097254 agctcgtacgcggaggtgagctcgacggcggaggagcagaacccgcagccggcggtggag 27097195

                                 
Query: 178      cagttcctcgccctcca 194
                || ||||| || |||||
Sbjct: 27097194 caattcctggctctcca 27097178
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>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1211_G06
          Length = 96421

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                         
Query: 26    aggagcttctgaagtacagagaatcggcacaggtggctgctgttgaagccatgcaggaag 85
             ||||||||||||||||||| ||  | |||||  |||||||||||||||| ||||||||||
Sbjct: 70111 aggagcttctgaagtacagggatgcagcacaaatggctgctgttgaagctatgcaggaag 70052

                                            
Query: 86    cttctgctgcagaaagcttgctgagatgttt 116
             ||||||||||||| | ||||||  |||||||
Sbjct: 70051 cttctgctgcagagaacttgcttcgatgttt 70021



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                         
Query: 118   agctcgtacgccgaggtgagctcaacggcagaggagcaaaacccgcagccgactgttgag 177
             ||||||||||| ||||||||||| ||||| |||||||| |||||||||||| | || |||
Sbjct: 68341 agctcgtacgcggaggtgagctcgacggcggaggagcagaacccgcagccggcggtggag 68282

                              
Query: 178   cagttcctcgccctcca 194
             || ||||| || |||||
Sbjct: 68281 caattcctggctctcca 68265
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>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
          BAC clone:OJ1521_G02
          Length = 117964

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                   
Query: 26 aggagcttctgaagtacagagaatcggcacaggtggctgctgttgaagccatgcagg 82
          ||||||||||||||||||| ||  | |||||  |||||||||||||||| |||||||
Sbjct: 57 aggagcttctgaagtacagggatgcagcacaaatggctgctgttgaagctatgcagg 1
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>gb|AC020641.8| Homo sapiens chromosome 10 clone RP11-222A11, complete sequence
          Length = 166098

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 77   tgcaggaagcttctgctgcaga 98
            ||||||||||||||||||||||
Sbjct: 2181 tgcaggaagcttctgctgcaga 2160
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 423     cacggtgtcatcgccgctggc 443
               |||||||||||||||||||||
Sbjct: 1017034 cacggtgtcatcgccgctggc 1017014
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>gb|AF083210.1| Cercopithecine herpesvirus 1 strain E2490 glycoprotein G (US4)
           gene, partial cds; glycoprotein gJ (US5) gene, complete
           cds; and glycoprotein gD (US6) gene, partial cds
          Length = 1408

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 361 aacgccgcgctcgccacggac 381
           |||||||||||||||||||||
Sbjct: 407 aacgccgcgctcgccacggac 427
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>gb|AF082808.1| Cercopithecine herpesvirus 1 strain 12930 glycoprotein G (US4)
           gene, partial cds; glycoprotein gJ (US5) gene, complete
           cds; and glycoprotein gD (US6) gene, partial cds
          Length = 1303

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 361 aacgccgcgctcgccacggac 381
           |||||||||||||||||||||
Sbjct: 349 aacgccgcgctcgccacggac 369
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>gb|AF082806.1| Cercopithecine herpesvirus 1 strain 16293 glycoprotein G (US4)
           gene, partial cds; glycoprotein gJ (US5) gene, complete
           cds; and glycoprotein gD (US6) gene, partial cds
          Length = 1302

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 361 aacgccgcgctcgccacggac 381
           |||||||||||||||||||||
Sbjct: 346 aacgccgcgctcgccacggac 366
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>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 361    aacgccgcgctcgccacggac 381
              |||||||||||||||||||||
Sbjct: 140528 aacgccgcgctcgccacggac 140548
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>dbj|AB074432.1| Cercopithecine herpesvirus 1 US1, US2, US3, US4, US5, US6, US7, US8,
            US8.5, US9, US10, US11, US12 genes, complete and partial
            cds
          Length = 14447

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 361  aacgccgcgctcgccacggac 381
            |||||||||||||||||||||
Sbjct: 6428 aacgccgcgctcgccacggac 6448
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>ref|XM_582013.2| PREDICTED: Bos taurus similar to Ladinin 1 (Lad-1) (120 kDa linear
           IgA bullous dermatosis antigen) (97 kDa linear IgA
           bullous dermatosis antigen) (Linear IgA disease antigen
           homolog) (LadA) (LOC505686), mRNA
          Length = 1947

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 291 ctctgccacggacgacgagg 310
           ||||||||||||||||||||
Sbjct: 204 ctctgccacggacgacgagg 223
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>ref|XM_607425.2| PREDICTED: Bos taurus similar to CG11909-PA (LOC528987), mRNA
          Length = 2430

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   caggtggctgctgttgaagc 74
            ||||||||||||||||||||
Sbjct: 1181 caggtggctgctgttgaagc 1162
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>gb|AC125054.4| Mus musculus BAC clone RP23-389M1 from chromosome 15, complete sequence
          Length = 188536

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    gaagccatgcaggaagcttctgct 93
             |||||||| |||||||||||||||
Sbjct: 50543 gaagccatacaggaagcttctgct 50566
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>gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, complete sequence
          Length = 225738

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 70     gaagccatgcaggaagcttctgct 93
              |||||||| |||||||||||||||
Sbjct: 185142 gaagccatacaggaagcttctgct 185165
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>emb|AL121910.26|HSDJ827L5 Human DNA sequence from clone RP5-827L5 on chromosome 20 Contains two
             putative novel genes, a CpG island, ESTs, STSs and GSSs,
             complete sequence
          Length = 141895

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    aagccatgcaggaagcttct 90
             ||||||||||||||||||||
Sbjct: 82057 aagccatgcaggaagcttct 82038
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>ref|XM_964956.1| PREDICTED: Tribolium castaneum similar to transient receptor
            potential cation channel, subfamily C, member 4 isoform 2
            (LOC658579), mRNA
          Length = 2340

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 399  ctacaacctcaagccggtcccggc 422
            |||||||||||||||| |||||||
Sbjct: 1050 ctacaacctcaagccgatcccggc 1073
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>gb|AC022399.15| Homo sapiens chromosome 10 clone RP11-4G18, complete sequence
          Length = 173064

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   ttgctgagatgtttgagctc 122
             ||||||||||||||||||||
Sbjct: 92945 ttgctgagatgtttgagctc 92926
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>gb|AC080106.6| Homo sapiens chromosome 11, clone RP11-62J13, complete sequence
          Length = 157637

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   ttgctgagatgtttgagctc 122
             ||||||||||||||||||||
Sbjct: 66347 ttgctgagatgtttgagctc 66328
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>gb|AF285236.1|AF285236 Pan troglodytes glucocerebrosidase (GBA) gene, complete cds
          Length = 7128

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 212  ccacggtgatcactgacacc 231
            ||||||||||||||||||||
Sbjct: 1704 ccacggtgatcactgacacc 1685
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>emb|AL773508.6| Mouse DNA sequence from clone RP23-253D15 on chromosome 2, complete
              sequence
          Length = 132091

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     gcttctgaagtacagagaat 49
              ||||||||||||||||||||
Sbjct: 100051 gcttctgaagtacagagaat 100032
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>dbj|AP000893.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-659G9, complete
             sequence
          Length = 198024

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   ttgctgagatgtttgagctc 122
             ||||||||||||||||||||
Sbjct: 92940 ttgctgagatgtttgagctc 92921


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,166,049
Number of Sequences: 3902068
Number of extensions: 3166049
Number of successful extensions: 63625
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63480
Number of HSP's gapped (non-prelim): 145
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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