ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet120g01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191189.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1338 Score = 210 bits (106), Expect = 3e-51 Identities = 184/210 (87%) Strand = Plus / Plus Query: 240 atgggcctcacggtgtgccgcacctgggccttcaacgacggcgcctacaacgcgctccag 299 ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 304 atgggcctcaccgtgtgccgcacctgggccttcaacgacggctcctacaacgccctccag 363 Query: 300 ctctccccggggcacttcgacgagcgcgtcttccgggcgctggacatggtcgtcgtggag 359 |||||||| || ||||||||||||||||||||| |||||||||| ||| || | |||| Sbjct: 364 ctctcccccggccacttcgacgagcgcgtcttcaaggcgctggaccgggtggtggcggag 423 Query: 360 gcccggcggcacggcgtgcggctcgtcctcagcctggccaacaacctggaggcctacggc 419 || | ||||||||||||||| |||| |||||||| ||||||||||| || |||||| Sbjct: 424 gcgtcggagcacggcgtgcggctgatcctgagcctggcgaacaacctggacgcgtacggc 483 Query: 420 gggaagacgcagtacgcgcggtgggcgtgg 449 |||||| |||||||| ||||||||||||| Sbjct: 484 gggaagcggcagtacgtgcggtgggcgtgg 513 Score = 58.0 bits (29), Expect = 3e-05 Identities = 82/99 (82%), Gaps = 3/99 (3%) Strand = Plus / Plus Query: 126 atggcggcgtgcaacgggctgttcgtgtaccacatcctcggcctggcctccctggtggcc 185 ||||||| | ||||||| ||| || |||||||||||||||| ||||||||| | || Sbjct: 1 atggcggtgggcaacggcctgatcctgtaccacatcctcgggctggcctcctgcatcgcg 60 Query: 186 gtgttctacttctccctcctcggcgaggtggacctccgc 224 || |||||||||| |||||||||||||||||||||| Sbjct: 61 ctggtctacttctc---cctcggcgaggtggacctccgc 96
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Minus Query: 240 atgggcctcacggtgtgccgcacctgggccttcaacgacggcgcctacaacgcgctccag 299 ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 31247691 atgggcctcaccgtgtgccgcacctgggccttcaacgacggctcctacaacgccctccag 31247632 Query: 300 ctctccccggggcacttcgacgagcgcgtcttc 332 |||||||| || ||||||||||||||||||||| Sbjct: 31247631 ctctcccccggccacttcgacgagcgcgtcttc 31247599 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 368 gcacggcgtgcggctcgtcctcagcctggccaacaacctggaggcctacggcgggaagac 427 ||||||||||||||| |||| |||||||| ||||||||||| || |||||||||||| Sbjct: 31247469 gcacggcgtgcggctgatcctgagcctggcgaacaacctggacgcgtacggcgggaagcg 31247410 Query: 428 gcagtacgcgcggtgggcgtgg 449 |||||||| ||||||||||||| Sbjct: 31247409 gcagtacgtgcggtgggcgtgg 31247388 Score = 63.9 bits (32), Expect = 4e-07 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Minus Query: 123 acaatggcggcgtgcaacgggctgttcgtgtaccacatcctcggcctggcctccctggtg 182 |||||||||| | ||||||| ||| || |||||||||||||||| ||||||||| | Sbjct: 31247997 acaatggcggtgggcaacggcctgatcctgtaccacatcctcgggctggcctcctgcatc 31247938 Query: 183 gccgtgttctacttctccctcctcggcgaggtggacctccgc 224 || || |||||||||| |||||||||||||||||||||| Sbjct: 31247937 gcgctggtctacttctc---cctcggcgaggtggacctccgc 31247899
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Minus Query: 240 atgggcctcacggtgtgccgcacctgggccttcaacgacggcgcctacaacgcgctccag 299 ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 174036 atgggcctcaccgtgtgccgcacctgggccttcaacgacggctcctacaacgccctccag 173977 Query: 300 ctctccccggggcacttcgacgagcgcgtcttc 332 |||||||| || ||||||||||||||||||||| Sbjct: 173976 ctctcccccggccacttcgacgagcgcgtcttc 173944 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 368 gcacggcgtgcggctcgtcctcagcctggccaacaacctggaggcctacggcgggaagac 427 ||||||||||||||| |||| |||||||| ||||||||||| || |||||||||||| Sbjct: 173814 gcacggcgtgcggctgatcctgagcctggcgaacaacctggacgcgtacggcgggaagcg 173755 Query: 428 gcagtacgcgcggtgggcgtgg 449 |||||||| ||||||||||||| Sbjct: 173754 gcagtacgtgcggtgggcgtgg 173733 Score = 63.9 bits (32), Expect = 4e-07 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Minus Query: 123 acaatggcggcgtgcaacgggctgttcgtgtaccacatcctcggcctggcctccctggtg 182 |||||||||| | ||||||| ||| || |||||||||||||||| ||||||||| | Sbjct: 174342 acaatggcggtgggcaacggcctgatcctgtaccacatcctcgggctggcctcctgcatc 174283 Query: 183 gccgtgttctacttctccctcctcggcgaggtggacctccgc 224 || || |||||||||| |||||||||||||||||||||| Sbjct: 174282 gcgctggtctacttctc---cctcggcgaggtggacctccgc 174244
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 145 bits (73), Expect = 1e-31 Identities = 88/93 (94%) Strand = Plus / Minus Query: 240 atgggcctcacggtgtgccgcacctgggccttcaacgacggcgcctacaacgcgctccag 299 ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 1974 atgggcctcaccgtgtgccgcacctgggccttcaacgacggctcctacaacgccctccag 1915 Query: 300 ctctccccggggcacttcgacgagcgcgtcttc 332 |||||||| || ||||||||||||||||||||| Sbjct: 1914 ctctcccccggccacttcgacgagcgcgtcttc 1882 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 368 gcacggcgtgcggctcgtcctcagcctggccaacaacctggaggcctacggcgggaagac 427 ||||||||||||||| |||| |||||||| ||||||||||| || |||||||||||| Sbjct: 1752 gcacggcgtgcggctgatcctgagcctggcgaacaacctggacgcgtacggcgggaagcg 1693 Query: 428 gcagtacgcgcggtgggcgtgg 449 |||||||| ||||||||||||| Sbjct: 1692 gcagtacgtgcggtgggcgtgg 1671 Score = 63.9 bits (32), Expect = 4e-07 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Minus Query: 123 acaatggcggcgtgcaacgggctgttcgtgtaccacatcctcggcctggcctccctggtg 182 |||||||||| | ||||||| ||| || |||||||||||||||| ||||||||| | Sbjct: 2280 acaatggcggtgggcaacggcctgatcctgtaccacatcctcgggctggcctcctgcatc 2221 Query: 183 gccgtgttctacttctccctcctcggcgaggtggacctccgc 224 || || |||||||||| |||||||||||||||||||||| Sbjct: 2220 gcgctggtctacttctc---cctcggcgaggtggacctccgc 2182
>gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, complete sequence Length = 221860 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 199 ccctcctcggcgaggtggacctc 221 ||||||||||||||||||||||| Sbjct: 183301 ccctcctcggcgaggtggacctc 183323
>gb|BC051118.1| Mus musculus furry homolog-like (Drosophila), mRNA (cDNA clone MGC:59201 IMAGE:5400243), complete cds Length = 5059 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 199 ccctcctcggcgaggtggacctc 221 ||||||||||||||||||||||| Sbjct: 399 ccctcctcggcgaggtggacctc 421
>ref|NM_028194.1| Mus musculus furry homolog-like (Drosophila) (Fryl), mRNA Length = 5059 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 199 ccctcctcggcgaggtggacctc 221 ||||||||||||||||||||||| Sbjct: 399 ccctcctcggcgaggtggacctc 421
>ref|XM_344235.2| PREDICTED: Rattus norvegicus similar to 2510002A14Rik protein (predicted) (LOC364144), mRNA Length = 9048 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 199 ccctcctcggcgaggtggacctc 221 ||||||||||||||||||||||| Sbjct: 4847 ccctcctcggcgaggtggacctc 4869
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 378 cggctcgtcctcagcctggccaa 400 ||||||||||||||||||||||| Sbjct: 1689761 cggctcgtcctcagcctggccaa 1689783
>dbj|AB093265.1| Mus musculus mRNA for mKIAA0826 protein Length = 5274 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 199 ccctcctcggcgaggtggacctc 221 ||||||||||||||||||||||| Sbjct: 629 ccctcctcggcgaggtggacctc 651
>gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, complete sequence Length = 231380 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 199 ccctcctcggcgaggtggacctc 221 ||||||||||||||||||||||| Sbjct: 130781 ccctcctcggcgaggtggacctc 130759
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.39 Identities = 58/70 (82%) Strand = Plus / Plus Query: 238 ggatgggcctcacggtgtgccgcacctgggccttcaacgacggcgcctacaacgcgctcc 297 ||||||| ||| | || |||||||||||||| |||| |||||||| | | |||||||| Sbjct: 11720709 ggatggggctctccgtctgccgcacctgggcgttcagcgacggcggccccggcgcgctcc 11720768 Query: 298 agctctcccc 307 || ||||||| Sbjct: 11720769 agatctcccc 11720778
>dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005N06 Length = 140639 Score = 44.1 bits (22), Expect = 0.39 Identities = 58/70 (82%) Strand = Plus / Plus Query: 238 ggatgggcctcacggtgtgccgcacctgggccttcaacgacggcgcctacaacgcgctcc 297 ||||||| ||| | || |||||||||||||| |||| |||||||| | | |||||||| Sbjct: 69251 ggatggggctctccgtctgccgcacctgggcgttcagcgacggcggccccggcgcgctcc 69310 Query: 298 agctctcccc 307 || ||||||| Sbjct: 69311 agatctcccc 69320
>ref|XM_530574.1| PREDICTED: Pan troglodytes LOC460114 (LOC460114), mRNA Length = 1013 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 254 ttctccctcctcggcgaggtg 274
>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16, complete sequence Length = 139615 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 246 ctcacggtgtgccgcacctgggccttcaacgacggcg 282 |||||||| ||||| || ||||| ||||||||||||| Sbjct: 99570 ctcacggtttgccggacgtgggcgttcaacgacggcg 99606
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 246 ctcacggtgtgccgcacctgggccttcaacgacggcg 282 |||||||| ||||| || ||||| ||||||||||||| Sbjct: 18730 ctcacggtttgccggacgtgggcgttcaacgacggcg 18766
>ref|NM_031847.2| Homo sapiens microtubule-associated protein 2 (MAP2), transcript variant 4, mRNA Length = 5470 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 820 ttctccctcctcggcgaggtg 840
>ref|NM_031845.2| Homo sapiens microtubule-associated protein 2 (MAP2), transcript variant 2, mRNA Length = 5377 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 820 ttctccctcctcggcgaggtg 840
>ref|NM_001039538.1| Homo sapiens microtubule-associated protein 2 (MAP2), transcript variant 5, mRNA Length = 5844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 1194 ttctccctcctcggcgaggtg 1214
>ref|NM_002374.3| Homo sapiens microtubule-associated protein 2 (MAP2), transcript variant 1, mRNA Length = 9445 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 4888 ttctccctcctcggcgaggtg 4908
>gb|BC038857.1| Homo sapiens microtubule-associated protein 2, transcript variant 5, mRNA (cDNA clone IMAGE:5223046), complete cds Length = 2286 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 1183 ttctccctcctcggcgaggtg 1203
>gb|BC027583.1| Homo sapiens microtubule-associated protein 2, mRNA (cDNA clone IMAGE:4837202), complete cds Length = 1870 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 892 ttctccctcctcggcgaggtg 912
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 tcggcctggcctccctggtgg 183 ||||||||||||||||||||| Sbjct: 3277817 tcggcctggcctccctggtgg 3277837
>gb|U34065.1|HSMAP14 Human microtubule-associated protein-2 (MAP-2) gene, exon 14 Length = 149 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 56 ttctccctcctcggcgaggtg 76
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 acaacctggaggcctacggcg 420 ||||||||||||||||||||| Sbjct: 101333 acaacctggaggcctacggcg 101313
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 246 ctcacggtgtgccgcacctgggccttcaacgacggcg 282 |||||||| ||||| || ||||| ||||||||||||| Sbjct: 14683276 ctcacggtttgccggacgtgggcgttcaacgacggcg 14683312
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 cacggtgtgccgcacctgggc 268 ||||||||||||||||||||| Sbjct: 7250019 cacggtgtgccgcacctgggc 7250039
>gb|AC006385.3|AC006385 Homo sapiens BAC clone RP11-559J5 from 2, complete sequence Length = 173508 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 22542 ttctccctcctcggcgaggtg 22562
>gb|AF084543.1|AF084543 Tupaia herpesvirus major DNA binding protein (DNBI), putative processing and transport protein (PRTP), glycoprotein B (gB), and DNA polymerase (DPOL) genes, complete cds Length = 13461 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 acaacctggaggcctacggcg 420 ||||||||||||||||||||| Sbjct: 4038 acaacctggaggcctacggcg 4058
>gb|U89330.1|HSU89330 Human alternatively spliced microtubule-associated protein 2 (MAP2) mRNA, complete cds Length = 5595 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 4628 ttctccctcctcggcgaggtg 4648
>gb|U89329.1|HSU89329 Human alternatively spliced microtubule-associated protein 2C (MAP2) mRNA, complete cds Length = 1539 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 572 ttctccctcctcggcgaggtg 592
>dbj|AB209330.1| Homo sapiens mRNA for microtubule-associated protein 2 isoform 2 variant protein Length = 2547 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 738 ttctccctcctcggcgaggtg 758
>gb|M25668.1|HUMMAP2A Human microtubule associated protein 2 (MAP2) mRNA, partial sequence Length = 3206 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 3161 ttctccctcctcggcgaggtg 3181
>gb|U01828.1|HSU01828 Human microtubule-associated protein 2 (MAP2) mRNA, complete cds Length = 5968 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttctccctcctcggcgaggtg 215 ||||||||||||||||||||| Sbjct: 4888 ttctccctcctcggcgaggtg 4908
>ref|XM_360087.1| Magnaporthe grisea 70-15 hypothetical protein (MG05462.4) partial mRNA Length = 597 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cggcggcacggcgtgcggct 382 |||||||||||||||||||| Sbjct: 165 cggcggcacggcgtgcggct 146
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 ccggcggcacggcgtgcggctcgt 385 ||||||||||||||||| |||||| Sbjct: 3159453 ccggcggcacggcgtgccgctcgt 3159476
>emb|AJ488769.2|AFR488769 Actinoplanes firuliensis partial friulimicin biosynthetic gene cluster Length = 15457 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ccggcggcacggcgtgcggc 381 |||||||||||||||||||| Sbjct: 11991 ccggcggcacggcgtgcggc 11972
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 ccggcggcacggcgtgcggctcgt 385 ||||||||||||||||| |||||| Sbjct: 1336826 ccggcggcacggcgtgccgctcgt 1336849
>gb|AC117416.8| Homo sapiens 3 BAC RP11-26P16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 129306 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 ggacctccgctttcccggcgccgg 238 ||||||||||||||||| |||||| Sbjct: 33398 ggacctccgctttcccgacgccgg 33421
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 gagcgcgtcttccgggcgctggac 344 ||||| |||||||||||||||||| Sbjct: 2806715 gagcgggtcttccgggcgctggac 2806692
>emb|BX470158.9| Zebrafish DNA sequence from clone CH211-113P5 in linkage group 8, complete sequence Length = 119483 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gcctccctggtggccgtgtt 190 |||||||||||||||||||| Sbjct: 96699 gcctccctggtggccgtgtt 96718
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 ccggcggcacggcgtgcggctcgt 385 ||||||||||||||||| |||||| Sbjct: 1296126 ccggcggcacggcgtgccgctcgt 1296103
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 acggcgtgcggctcgtcctc 389 |||||||||||||||||||| Sbjct: 1068742 acggcgtgcggctcgtcctc 1068761
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome Length = 1197687 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gcgtcttccgggcgctggac 344 |||||||||||||||||||| Sbjct: 357526 gcgtcttccgggcgctggac 357545 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,495,052 Number of Sequences: 3902068 Number of extensions: 3495052 Number of successful extensions: 348525 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 347757 Number of HSP's gapped (non-prelim): 768 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
