>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                            
Query: 358      gtgatttcctccgcgccaccgccccggcggccctcctgctcgacttcttctgctacagcg 417
                |||| ||||||||  ||||| ||||||| | |||| |  |||||||||||||||||||||
Sbjct: 30669317 gtgacttcctccggtccacctccccggccgtcctcatcatcgacttcttctgctacagcg 30669376

                                                            
Query: 418      ccgccgatgtcgcggcagagatcggcatcccgacgtatttcttc 461
                ||  ||| || |  || ||| || ||||||||||||| ||||||
Sbjct: 30669377 ccctcgacgttggcgccgagctccgcatcccgacgtacttcttc 30669420



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 397      tcgacttcttctgctacagcgcc 419
                |||||||||||||||||||||||
Sbjct: 30660368 tcgacttcttctgctacagcgcc 30660390

>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1060H01
          Length = 157987

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                          
Query: 358    gtgatttcctccgcgccaccgccccggcggccctcctgctcgacttcttctgctacagcg 417
              |||| ||||||||  ||||| ||||||| | |||| |  |||||||||||||||||||||
Sbjct: 111594 gtgacttcctccggtccacctccccggccgtcctcatcatcgacttcttctgctacagcg 111653

                                                          
Query: 418    ccgccgatgtcgcggcagagatcggcatcccgacgtatttcttc 461
              ||  ||| || |  || ||| || ||||||||||||| ||||||
Sbjct: 111654 ccctcgacgttggcgccgagctccgcatcccgacgtacttcttc 111697



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 397    tcgacttcttctgctacagcgcc 419
              |||||||||||||||||||||||
Sbjct: 102645 tcgacttcttctgctacagcgcc 102667

>dbj|AK108266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B10, full
           insert sequence
          Length = 1688

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Plus

                                                                       
Query: 358 gtgatttcctccgcgccaccgccccggcggccctcctgctcgacttcttctgctacagcg 417
           |||| ||||||||  ||||| ||||||| | |||| |  |||||||||||||||||||||
Sbjct: 326 gtgacttcctccggtccacctccccggccgtcctcatcatcgacttcttctgctacagcg 385

                                                       
Query: 418 ccgccgatgtcgcggcagagatcggcatcccgacgtatttcttc 461
           ||  ||| || |  || ||| || ||||||||||||| ||||||
Sbjct: 386 ccctcgacgttggcgccgagctccgcatcccgacgtacttcttc 429

>ref|NM_191562.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1416

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 397 tcgacttcttctgctacagcgcc 419
           |||||||||||||||||||||||
Sbjct: 344 tcgacttcttctgctacagcgcc 366

>dbj|AK106947.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D12, full
           insert sequence
          Length = 1658

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 397 tcgacttcttctgctacagcgcc 419
           |||||||||||||||||||||||
Sbjct: 469 tcgacttcttctgctacagcgcc 491

>gb|DQ232587.1| Rhodobacter sphaeroides 2.4.1 plasmid E, partial sequence
          Length = 37100

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 367   tccgcgccaccgccccggcggccctc 392
             ||||||||||||| ||||||||||||
Sbjct: 14223 tccgcgccaccgcgccggcggccctc 14198

>gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosome ul, complete
             sequence
          Length = 146640

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 390   ctcctgctcgacttcttctgct 411
             ||||||||||||||||||||||
Sbjct: 50051 ctcctgctcgacttcttctgct 50072

>ref|XM_616867.2| PREDICTED: Bos taurus similar to Multidrug resistance protein 1
           (P-glycoprotein 1) (LOC536724), mRNA
          Length = 3897

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 399 gacttcttctgctacagcgcc 419
           |||||||||||||||||||||
Sbjct: 714 gacttcttctgctacagcgcc 694

>ref|XM_429609.1| PREDICTED: Gallus gallus LOC418801 (LOC418801), mRNA
          Length = 927

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 392 cctgctcgacttcttctgcta 412
           |||||||||||||||||||||
Sbjct: 640 cctgctcgacttcttctgcta 660

>ref|XM_883499.1| Leishmania major strain Friedlin hypothetical protein (L2969.02)
           partial mRNA
          Length = 1767

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 88  ctgcgcccggcgcgggccatt 108
           |||||||||||||||||||||
Sbjct: 519 ctgcgcccggcgcgggccatt 499

>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end
          Length = 225394

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 88     ctgcgcccggcgcgggccatt 108
              |||||||||||||||||||||
Sbjct: 218180 ctgcgcccggcgcgggccatt 218200

>gb|AC008764.9| Homo sapiens chromosome 19 clone CTD-3222D19, complete sequence
          Length = 172562

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2      ctgcttcccacagccacgtcc 22
              |||||||||||||||||||||
Sbjct: 149213 ctgcttcccacagccacgtcc 149193

>gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, complete sequence
          Length = 180660

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   gtatttcttcttcctgggtt 471
             ||||||||||||||||||||
Sbjct: 22989 gtatttcttcttcctgggtt 22970

>gb|AF491966.1| Pegoscapus hoffmeyeri A microsatellite Pe3 sequence
          Length = 584

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 244 gcccctttctctctttccactacatccc 271
           ||||| |||||||| |||||||||||||
Sbjct: 129 gcccccttctctctgtccactacatccc 102

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 216     ctgtacggcaacggcgacgc 235
               ||||||||||||||||||||
Sbjct: 5623766 ctgtacggcaacggcgacgc 5623785



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 283     tcccgcacgggatgccggag 302
               ||||||||||||||||||||
Sbjct: 4023236 tcccgcacgggatgccggag 4023217

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 406     tctgctacagcgccgccgat 425
               ||||||||||||||||||||
Sbjct: 4704809 tctgctacagcgccgccgat 4704790

>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence
          Length = 225183

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   gtatttcttcttcctgggtt 471
             ||||||||||||||||||||
Sbjct: 64989 gtatttcttcttcctgggtt 64970

>gb|AC102609.7| Mus musculus, clone RP23-403I3, complete sequence
          Length = 208575

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   ccagcccctttctctctttc 260
             ||||||||||||||||||||
Sbjct: 77450 ccagcccctttctctctttc 77431

>emb|AL590376.7| Human DNA sequence from clone RP11-22P2 on chromosome Xq23-24, complete
             sequence
          Length = 18024

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    cctagaatgaaagaggcaaa 40
             ||||||||||||||||||||
Sbjct: 10903 cctagaatgaaagaggcaaa 10922

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 186     gccggcaacgccaccgttcccgcc 209
               |||||||||||||||| |||||||
Sbjct: 2130011 gccggcaacgccaccgatcccgcc 2129988

>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster
          Length = 89976

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  ccaccgccccggcggccctc 392
            ||||||||||||||||||||
Sbjct: 1530 ccaccgccccggcggccctc 1549

>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of
            glycopeptide antibiotic teicoplanin
          Length = 89713

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  ccaccgccccggcggccctc 392
            ||||||||||||||||||||
Sbjct: 8136 ccaccgccccggcggccctc 8155

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     cggcaacggcgacgcttcag 240
               ||||||||||||||||||||
Sbjct: 2320292 cggcaacggcgacgcttcag 2320311

>gb|AC068945.7| Homo sapiens BAC clone RP11-789C1 from 4, complete sequence
          Length = 219476

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    ccagcccctttctctctttc 260
              ||||||||||||||||||||
Sbjct: 144292 ccagcccctttctctctttc 144311

>gb|AC078845.2|AC078845 Homo sapiens chromosome 7 clone RP11-707A19, complete sequence
          Length = 161514

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   tttcttcttcctgggttgca 474
             ||||||||||||||||||||
Sbjct: 36554 tttcttcttcctgggttgca 36573

>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence
          Length = 170353

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 452    gtatttcttcttcctgggtt 471
              ||||||||||||||||||||
Sbjct: 155167 gtatttcttcttcctgggtt 155148

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    ctgtacggcaacggcgacgc 235
              ||||||||||||||||||||
Sbjct: 629649 ctgtacggcaacggcgacgc 629630

>gb|AC140947.1| Gallus gallus BAC clone TAM33-40B24 from chromosome ul, complete sequence
          Length = 229639

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    cctgctcgacttcttctgct 411
              ||||||||||||||||||||
Sbjct: 177143 cctgctcgacttcttctgct 177162

>gb|AC108908.16| Mus musculus chromosome 7, clone RP23-179K7, complete sequence
          Length = 220289

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   ccagcccctttctctctttc 260
             ||||||||||||||||||||
Sbjct: 68679 ccagcccctttctctctttc 68698


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,750,939
Number of Sequences: 3902068
Number of extensions: 3750939
Number of successful extensions: 73316
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72990
Number of HSP's gapped (non-prelim): 323
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)