ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet120f02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468586.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 483 Score = 446 bits (225), Expect = e-122 Identities = 346/384 (90%), Gaps = 2/384 (0%) Strand = Plus / Plus Query: 85 ggggggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccc 144 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 7 gggggaatcgcgcgcggccgcctcgcggaggagcggaaggcgtggcggaagaaccaccca 66 Query: 145 cacggcttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctgg 204 ||||| ||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||| Sbjct: 67 cacggtttcgtcgccaagccggagacgttggccgacgggacggtcaacctcatgatctgg 126 Query: 205 cactgcaccatccccggcaagcaagggactgattgggaaggtggaaactaccctctcacc 264 |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 127 cactgcacaatccccggcaagcaagggactgattgggaaggtggatactttcctctcact 186 Query: 265 cttcatttctctgaggattaccctagcaagcctcccaagtgcaagttccccacaaa-ttt 323 ||||||||| |||||||||||||||||| |||||||||||||||||||| ||| ||| Sbjct: 187 cttcatttcagtgaggattaccctagcaaacctcccaagtgcaagttccc-acagggttt 245 Query: 324 cttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacag 383 ||||||||| ||||||||||| ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 246 cttccacccaaatgtctatccttcagggacagtctgcctttcaattcttaatgaagacag 305 Query: 384 tggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttga 443 || ||||||||||||||||| || ||||| || ||||||||||| |||||| ||||||| Sbjct: 306 cggttggagacctgctattaccgtcaagcaaattcttgttggaatccaggacttgcttga 365 Query: 444 tctgccgaatcctgctgaccctgc 467 || ||| ||||||||||| ||||| Sbjct: 366 tcagcctaatcctgctgatcctgc 389
>dbj|AK102397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H08, full insert sequence Length = 857 Score = 446 bits (225), Expect = e-122 Identities = 346/384 (90%), Gaps = 2/384 (0%) Strand = Plus / Plus Query: 85 ggggggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccc 144 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 48 gggggaatcgcgcgcggccgcctcgcggaggagcggaaggcgtggcggaagaaccaccca 107 Query: 145 cacggcttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctgg 204 ||||| ||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||| Sbjct: 108 cacggtttcgtcgccaagccggagacgttggccgacgggacggtcaacctcatgatctgg 167 Query: 205 cactgcaccatccccggcaagcaagggactgattgggaaggtggaaactaccctctcacc 264 |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 168 cactgcacaatccccggcaagcaagggactgattgggaaggtggatactttcctctcact 227 Query: 265 cttcatttctctgaggattaccctagcaagcctcccaagtgcaagttccccacaaa-ttt 323 ||||||||| |||||||||||||||||| |||||||||||||||||||| ||| ||| Sbjct: 228 cttcatttcagtgaggattaccctagcaaacctcccaagtgcaagttccc-acagggttt 286 Query: 324 cttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacag 383 ||||||||| ||||||||||| ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 287 cttccacccaaatgtctatccttcagggacagtctgcctttcaattcttaatgaagacag 346 Query: 384 tggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttga 443 || ||||||||||||||||| || ||||| || ||||||||||| |||||| ||||||| Sbjct: 347 cggttggagacctgctattaccgtcaagcaaattcttgttggaatccaggacttgcttga 406 Query: 444 tctgccgaatcctgctgaccctgc 467 || ||| ||||||||||| ||||| Sbjct: 407 tcagcctaatcctgctgatcctgc 430
>dbj|AK062161.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-B02, full insert sequence Length = 981 Score = 446 bits (225), Expect = e-122 Identities = 346/384 (90%), Gaps = 2/384 (0%) Strand = Plus / Plus Query: 85 ggggggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccc 144 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 59 gggggaatcgcgcgcggccgcctcgcggaggagcggaaggcgtggcggaagaaccaccca 118 Query: 145 cacggcttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctgg 204 ||||| ||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||| Sbjct: 119 cacggtttcgtcgccaagccggagacgttggccgacgggacggtcaacctcatgatctgg 178 Query: 205 cactgcaccatccccggcaagcaagggactgattgggaaggtggaaactaccctctcacc 264 |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 179 cactgcacaatccccggcaagcaagggactgattgggaaggtggatactttcctctcact 238 Query: 265 cttcatttctctgaggattaccctagcaagcctcccaagtgcaagttccccacaaa-ttt 323 ||||||||| |||||||||||||||||| |||||||||||||||||||| ||| ||| Sbjct: 239 cttcatttcagtgaggattaccctagcaaacctcccaagtgcaagttccc-acagggttt 297 Query: 324 cttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacag 383 ||||||||| ||||||||||| ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 298 cttccacccaaatgtctatccttcagggacagtctgcctttcaattcttaatgaagacag 357 Query: 384 tggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttga 443 || ||||||||||||||||| || ||||| || ||||||||||| |||||| ||||||| Sbjct: 358 cggttggagacctgctattaccgtcaagcaaattcttgttggaatccaggacttgcttga 417 Query: 444 tctgccgaatcctgctgaccctgc 467 || ||| ||||||||||| ||||| Sbjct: 418 tcagcctaatcctgctgatcctgc 441
>ref|NM_197540.1| Oryza sativa (japonica cultivar-group) putative ubiquitin-conjugating enzyme (OSJNBb0060I05.2), mRNA Length = 742 Score = 377 bits (190), Expect = e-101 Identities = 335/381 (87%), Gaps = 2/381 (0%) Strand = Plus / Plus Query: 88 gggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccac 147 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 10 gggatcgcacgcggccgcctcgcggaggagcgcaaggcctggcggaagaaccaccctcac 69 Query: 148 ggcttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcac 207 || ||||| || |||||||||||| ||| |||||| ||| ||||||||| |||||||| Sbjct: 70 gggttcgtggcgaagccggagacgatggccgacgggtcggcgaacctcatgatctggcac 129 Query: 208 tgcaccatccccggcaagcaagggactgattgggaaggtggaaactaccctctcaccctt 267 |||||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||| Sbjct: 130 tgcaccatccccggcaagcaggggaccgattgggaaggtgggtactaccctcttaccctt 189 Query: 268 catttctctgaggattaccctagcaagcctcccaagtgcaagttccccaca-aatttctt 326 || ||| |||||| || |||||||| || |||||||||||||| |||||| || || Sbjct: 190 cacttcagtgaggactatcctagcaaaccacccaagtgcaagtt-cccacagggcttttt 248 Query: 327 ccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagtgg 386 |||||| ||||||||||| ||||||||||| ||||| ||||| || |||||||| ||||| Sbjct: 249 ccacccaaatgtctatccttcaggaacagtgtgcctctcaattcttaatgaggatagtgg 308 Query: 387 ctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatct 446 ||||||||||||||| ||||| ||||| |||||||||||||| |||||| ||||||||| Sbjct: 309 ctggagacctgctatcactgtaaagcagatccttgttggaatacaggacttgcttgatca 368 Query: 447 gccgaatcctgctgaccctgc 467 ||| ||||||||||| ||||| Sbjct: 369 gccaaatcctgctgatcctgc 389
>dbj|AK121221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090H15, full insert sequence Length = 843 Score = 377 bits (190), Expect = e-101 Identities = 335/381 (87%), Gaps = 2/381 (0%) Strand = Plus / Plus Query: 88 gggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccac 147 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 123 gggatcgcacgcggccgcctcgcggaggagcgcaaggcctggcggaagaaccaccctcac 182 Query: 148 ggcttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcac 207 || ||||| || |||||||||||| ||| |||||| ||| ||||||||| |||||||| Sbjct: 183 gggttcgtggcgaagccggagacgatggccgacgggtcggcgaacctcatgatctggcac 242 Query: 208 tgcaccatccccggcaagcaagggactgattgggaaggtggaaactaccctctcaccctt 267 |||||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||| Sbjct: 243 tgcaccatccccggcaagcaggggaccgattgggaaggtgggtactaccctcttaccctt 302 Query: 268 catttctctgaggattaccctagcaagcctcccaagtgcaagttccccaca-aatttctt 326 || ||| |||||| || |||||||| || |||||||||||||| |||||| || || Sbjct: 303 cacttcagtgaggactatcctagcaaaccacccaagtgcaagtt-cccacagggcttttt 361 Query: 327 ccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagtgg 386 |||||| ||||||||||| ||||||||||| ||||| ||||| || |||||||| ||||| Sbjct: 362 ccacccaaatgtctatccttcaggaacagtgtgcctctcaattcttaatgaggatagtgg 421 Query: 387 ctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatct 446 ||||||||||||||| ||||| ||||| |||||||||||||| |||||| ||||||||| Sbjct: 422 ctggagacctgctatcactgtaaagcagatccttgttggaatacaggacttgcttgatca 481 Query: 447 gccgaatcctgctgaccctgc 467 ||| ||||||||||| ||||| Sbjct: 482 gccaaatcctgctgatcctgc 502
>dbj|AK105227.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-C09, full insert sequence Length = 809 Score = 377 bits (190), Expect = e-101 Identities = 335/381 (87%), Gaps = 2/381 (0%) Strand = Plus / Plus Query: 88 gggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccac 147 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 77 gggatcgcacgcggccgcctcgcggaggagcgcaaggcctggcggaagaaccaccctcac 136 Query: 148 ggcttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcac 207 || ||||| || |||||||||||| ||| |||||| ||| ||||||||| |||||||| Sbjct: 137 gggttcgtggcgaagccggagacgatggccgacgggtcggcgaacctcatgatctggcac 196 Query: 208 tgcaccatccccggcaagcaagggactgattgggaaggtggaaactaccctctcaccctt 267 |||||||||||||||||||| ||||| |||||||||||||| |||||||||| |||||| Sbjct: 197 tgcaccatccccggcaagcaggggaccgattgggaaggtgggtactaccctcttaccctt 256 Query: 268 catttctctgaggattaccctagcaagcctcccaagtgcaagttccccaca-aatttctt 326 || ||| |||||| || |||||||| || |||||||||||||| |||||| || || Sbjct: 257 cacttcagtgaggactatcctagcaaaccacccaagtgcaagtt-cccacagggcttttt 315 Query: 327 ccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagtgg 386 |||||| ||||||||||| ||||||||||| ||||| ||||| || |||||||| ||||| Sbjct: 316 ccacccaaatgtctatccttcaggaacagtgtgcctctcaattcttaatgaggatagtgg 375 Query: 387 ctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatct 446 ||||||||||||||| ||||| ||||| |||||||||||||| |||||| ||||||||| Sbjct: 376 ctggagacctgctatcactgtaaagcagatccttgttggaatacaggacttgcttgatca 435 Query: 447 gccgaatcctgctgaccctgc 467 ||| ||||||||||| ||||| Sbjct: 436 gccaaatcctgctgatcctgc 456
>gb|AY106327.1| Zea mays PCO142080 mRNA sequence Length = 1096 Score = 373 bits (188), Expect = e-100 Identities = 334/383 (87%) Strand = Plus / Plus Query: 85 ggggggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccc 144 ||||| ||||| |||||||||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 99 gggggaatcgcccgcggccgcctcgccgaggagcgcaaggcctggcgcaagaaccacccg 158 Query: 145 cacggcttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctgg 204 ||||| |||||||| ||||||||| ||||| |||||| ||||| ||||| ||| ||||| Sbjct: 159 cacggtttcgtcgcgaagccggagtcgctgcccgacgggacggtgaacctgatgatctgg 218 Query: 205 cactgcaccatccccggcaagcaagggactgattgggaaggtggaaactaccctctcacc 264 || ||||||||||||||||||||||||||||| |||||||||||| | | |||||||||| Sbjct: 219 cagtgcaccatccccggcaagcaagggactgactgggaaggtggatatttccctctcacc 278 Query: 265 cttcatttctctgaggattaccctagcaagcctcccaagtgcaagttccccacaaatttc 324 |||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 279 cttcattttagtgaggattaccctagcaagcctcccaagtgcaagttccctcagggtttc 338 Query: 325 ttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagt 384 |||||||| ||||| ||||| || ||||||||||||||||| || || |||||||||||| Sbjct: 339 ttccacccaaatgtgtatccttctggaacagtctgcctttcgattcttaatgaggacagt 398 Query: 385 ggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgat 444 || |||||||| ||||||||||| ||||| || || || || || |||||| |||| ||| Sbjct: 399 ggttggagaccagctattactgttaagcagattctcgtcgggatccaggacttgctagat 458 Query: 445 ctgccgaatcctgctgaccctgc 467 | ||| ||||||||||||||||| Sbjct: 459 cagccaaatcctgctgaccctgc 481
>gb|BT017879.1| Zea mays clone EL01N0513H12.c mRNA sequence Length = 763 Score = 333 bits (168), Expect = 3e-88 Identities = 328/379 (86%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 91 atcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccacggc 150 |||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 56 atcgcgcgcggccgcctcgccgaggagcgcaaggcctggcgcaagaaccacccccacggt 115 Query: 151 ttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcactgc 210 ||||| || | |||||| ||||||| |||||| ||| ||||||||||||||| ||| Sbjct: 116 ttcgtggcgaggccggaaacgctggccgacgggtcggcgaacctcatggtctggagctgt 175 Query: 211 accatccccggcaagcaagggactgattgggaaggtggaaactaccctctcacccttcat 270 ||||||||||||||||| ||||||||||||||| |||| ||||||| || ||||||||| Sbjct: 176 accatccccggcaagcaggggactgattgggaaagtgggtactacccacttacccttcat 235 Query: 271 ttctctgaggattaccctagcaagcctcccaagtgcaagttccccacaaa-tttcttcca 329 ||| ||| |||||||| |||||||||||||| ||||||||||| ||| ||| ||||| Sbjct: 236 ttcagtgaagattacccaagcaagcctcccaaatgcaagttccc-acagggttttttcca 294 Query: 330 cccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagtggctg 389 ||| ||||| ||||| ||||||||||||||||| ||||| ||||||||||| ||||| || Sbjct: 295 cccaaatgtttatccttcaggaacagtctgcctctcaattctcaatgaggatagtggttg 354 Query: 390 gagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctgcc 449 |||||||||||| ||||| ||||| || || |||||||| || ||| ||||||||| ||| Sbjct: 355 gagacctgctatcactgttaagcagattctagttggaatacaagacttgcttgatcagcc 414 Query: 450 gaatcctgctgaccctgcc 468 ||||| ||||| |||||| Sbjct: 415 caatccagctgatcctgcc 433
>gb|AY104461.1| Zea mays PCO145300 mRNA sequence Length = 916 Score = 333 bits (168), Expect = 3e-88 Identities = 328/379 (86%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 91 atcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccacggc 150 |||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 89 atcgcgcgcggccgcctcgccgaggagcgcaaggcctggcgcaagaaccacccccacggt 148 Query: 151 ttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcactgc 210 ||||| || | |||||| ||||||| |||||| ||| ||||||||||||||| ||| Sbjct: 149 ttcgtggcgaggccggaaacgctggccgacgggtcggcgaacctcatggtctggagctgt 208 Query: 211 accatccccggcaagcaagggactgattgggaaggtggaaactaccctctcacccttcat 270 ||||||||||||||||| ||||||||||||||| |||| ||||||| || ||||||||| Sbjct: 209 accatccccggcaagcaggggactgattgggaaagtgggtactacccacttacccttcat 268 Query: 271 ttctctgaggattaccctagcaagcctcccaagtgcaagttccccacaaa-tttcttcca 329 ||| ||| |||||||| |||||||||||||| ||||||||||| ||| ||| ||||| Sbjct: 269 ttcagtgaagattacccaagcaagcctcccaaatgcaagttccc-acagggttttttcca 327 Query: 330 cccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagtggctg 389 ||| ||||| ||||| ||||||||||||||||| ||||| ||||||||||| ||||| || Sbjct: 328 cccaaatgtttatccttcaggaacagtctgcctctcaattctcaatgaggatagtggttg 387 Query: 390 gagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctgcc 449 |||||||||||| ||||| ||||| || || |||||||| || ||| ||||||||| ||| Sbjct: 388 gagacctgctatcactgttaagcagattctagttggaatacaagacttgcttgatcagcc 447 Query: 450 gaatcctgctgaccctgcc 468 ||||| ||||| |||||| Sbjct: 448 caatccagctgatcctgcc 466
>gb|U49913.1|ZMU49913 Zea mays ubiquitin-conjugating enzyme mRNA, partial cds Length = 337 Score = 276 bits (139), Expect = 6e-71 Identities = 269/314 (85%), Gaps = 1/314 (0%) Strand = Plus / Minus Query: 100 ggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccacggcttcgtcgcc 159 |||||| |||| |||||||||||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 329 ggccgcatcgccgaggagcgcaaggcctggcgcaagaaccacccgcacggtttcgtcgcc 270 Query: 160 aagccggagacgctgggcgacggcacggtcaacctcatggtctggcactgcaccatcccc 219 | ||||| ||||| |||||| |||| ||||| ||| ||||||| ||||||||||| Sbjct: 269 gaagcggagtcgctgcccgacgg-acggygaacctgatgatctggcagtgcaccatcccs 211 Query: 220 ggcaagcaagggactgattgggaaggtggaaactaccctctcacccttcatttctctgag 279 |||||||||||||||| ||||| |||||| | | |||||||||||||||||| |||| Sbjct: 210 ngcaagcaagggactgactgggagggtggatatttccctctcacccttcattttagtgag 151 Query: 280 gattaccctagcaagcctcccaagtgcaagttccccacaaatttcttccacccgaatgtc 339 ||||||||||||||||||| |||||||||||||| |||||||||||| ||||| Sbjct: 150 gattaccctagcaagcctcsyaagtgcaagttccctcagggtttcttccacccaaatgtg 91 Query: 340 tatccctcaggaacagtctgcctttcaatcctcaatgaggacagtggctggagacctgct 399 ||||| || ||||||||||||||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 90 tatccttctggaacagtctgcctttcgatccttaatgaggacagtggttggagaccagct 31 Query: 400 attactgtgaagca 413 |||||||| ||||| Sbjct: 30 attactgttaagca 17
>gb|BT016839.1| Zea mays clone Contig672 mRNA sequence Length = 933 Score = 250 bits (126), Expect = 4e-63 Identities = 319/381 (83%), Gaps = 2/381 (0%) Strand = Plus / Minus Query: 88 gggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccac 147 ||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 859 gggatcgcgcgcggccgcctcgccgaggagcgcaaggcctggcgcaagaatcacccccac 800 Query: 148 ggcttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcac 207 || ||||| || | ||||||| ||||| |||||| | || ||||||||||||||| || Sbjct: 799 ggtttcgtggcgaggccggagtcgctgaccgacgggtccgtgaacctcatggtctggaac 740 Query: 208 tgcaccatccccggcaagcaagggactgattgggaaggtggaaactaccctctcaccctt 267 || ||||||||||||||||| ||||| |||||||||||||| ||||||| || |||||| Sbjct: 739 tgtaccatccccggcaagcacgggaccgattgggaaggtgggtactacccacttaccctt 680 Query: 268 catttctctgaggattaccctagcaagcctcccaagtgcaagttccccaca-aatttctt 326 |||||| ||| |||||||| ||||| | | ||| |||||||| ||||| ||| || Sbjct: 679 catttcagtgaagattacccaagcaaacttttcaaatgcaagtt-tccacagggtttttt 621 Query: 327 ccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagtgg 386 ||| || ||||| ||||| ||||||||||||||||| ||||| || || ||||| || | Sbjct: 620 ccatccaaatgtttatccatcaggaacagtctgcctctcaattctgaacgaggatagcga 561 Query: 387 ctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatct 446 |||||||||||||| ||||| ||||| || || |||||||| |||||| || |||||| Sbjct: 560 ttggagacctgctatcactgttaagcagattctagttggaatacaggacttgtttgatca 501 Query: 447 gccgaatcctgctgaccctgc 467 ||| ||||| ||||| ||||| Sbjct: 500 gcccaatccagctgatcctgc 480
>gb|AY111009.1| Zea mays CL2316_2 mRNA sequence Length = 559 Score = 214 bits (108), Expect = 2e-52 Identities = 209/243 (86%) Strand = Plus / Minus Query: 225 gcaagggactgattgggaaggtggaaactaccctctcacccttcatttctctgaggatta 284 ||||||||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||| Sbjct: 559 gcaagggactgattgggaaggtggatacttcccactcacccttcatttcagtgaggatta 500 Query: 285 ccctagcaagcctcccaagtgcaagttccccacaaatttcttccacccgaatgtctatcc 344 |||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 499 ccctagcaagcctcccaagtgcaagttccctcagggtttcttccacccaaatgtctatcc 440 Query: 345 ctcaggaacagtctgcctttcaatcctcaatgaggacagtggctggagacctgctattac 404 || ||| ||||||| ||||| ||||| ||||| || ||||| |||||||| |||||||| Sbjct: 439 ttctggaccagtctgtctttcgatccttaatgaagatagtggttggagaccagctattac 380 Query: 405 tgtgaagcanatccttgttggaattcaggacctgcttgatctgccgaatcctgctgaccc 464 ||| ||||| || || || || || |||||| |||| |||| ||| ||||||||||| || Sbjct: 379 tgttaagcagattctcgtcgggatccaggacttgctagatcagccaaatcctgctgatcc 320 Query: 465 tgc 467 ||| Sbjct: 319 tgc 317
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 155 bits (78), Expect = 2e-34 Identities = 137/154 (88%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 231 gactgattgggaaggtggaaactaccctctcacccttcatttctctgaggattaccctag 290 ||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||| Sbjct: 1300355 gactgattgggaaggtggatactttcctctcactcttcatttcagtgaggattaccctag 1300414 Query: 291 caagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtctatccctcag 349 ||| |||||||||||||||||||| ||| |||||||||||| ||||||||||| |||| Sbjct: 1300415 caaacctcccaagtgcaagttccc-acagggtttcttccacccaaatgtctatccttcag 1300473 Query: 350 gaacagtctgcctttcaatcctcaatgaggacag 383 | ||||||||||||||||| || ||||| ||||| Sbjct: 1300474 ggacagtctgcctttcaattcttaatgaagacag 1300507 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 151 ttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcactgc 210 ||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||| Sbjct: 1298186 ttcgtcgccaagccggagacgttggccgacgggacggtcaacctcatgatctggcactgc 1298245 Query: 211 accatccccggcaagcaaggg 231 || |||||||||||||||||| Sbjct: 1298246 acaatccccggcaagcaaggg 1298266 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 85 ggggggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccc 144 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1298010 gggggaatcgcgcgcggccgcctcgcggaggagcggaaggcgtggcggaagaaccaccca 1298069 Query: 145 cacg 148 |||| Sbjct: 1298070 cacg 1298073 Score = 89.7 bits (45), Expect = 8e-15 Identities = 71/80 (88%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 ||||||||||||||||| || ||||| || ||||||||||| |||||| ||||||||| | Sbjct: 1300594 tggagacctgctattaccgtcaagcaaattcttgttggaatccaggacttgcttgatcag 1300653 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 1300654 cctaatcctgctgatcctgc 1300673
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 155 bits (78), Expect = 2e-34 Identities = 137/154 (88%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 231 gactgattgggaaggtggaaactaccctctcacccttcatttctctgaggattaccctag 290 ||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||| Sbjct: 1300353 gactgattgggaaggtggatactttcctctcactcttcatttcagtgaggattaccctag 1300412 Query: 291 caagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtctatccctcag 349 ||| |||||||||||||||||||| ||| |||||||||||| ||||||||||| |||| Sbjct: 1300413 caaacctcccaagtgcaagttccc-acagggtttcttccacccaaatgtctatccttcag 1300471 Query: 350 gaacagtctgcctttcaatcctcaatgaggacag 383 | ||||||||||||||||| || ||||| ||||| Sbjct: 1300472 ggacagtctgcctttcaattcttaatgaagacag 1300505 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 151 ttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcactgc 210 ||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||| Sbjct: 1298184 ttcgtcgccaagccggagacgttggccgacgggacggtcaacctcatgatctggcactgc 1298243 Query: 211 accatccccggcaagcaaggg 231 || |||||||||||||||||| Sbjct: 1298244 acaatccccggcaagcaaggg 1298264 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 85 ggggggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccc 144 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1298008 gggggaatcgcgcgcggccgcctcgcggaggagcggaaggcgtggcggaagaaccaccca 1298067 Query: 145 cacg 148 |||| Sbjct: 1298068 cacg 1298071 Score = 89.7 bits (45), Expect = 8e-15 Identities = 71/80 (88%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 ||||||||||||||||| || ||||| || ||||||||||| |||||| ||||||||| | Sbjct: 1300592 tggagacctgctattaccgtcaagcaaattcttgttggaatccaggacttgcttgatcag 1300651 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 1300652 cctaatcctgctgatcctgc 1300671
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 155 bits (78), Expect = 2e-34 Identities = 137/154 (88%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 231 gactgattgggaaggtggaaactaccctctcacccttcatttctctgaggattaccctag 290 ||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||| Sbjct: 105257 gactgattgggaaggtggatactttcctctcactcttcatttcagtgaggattaccctag 105316 Query: 291 caagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtctatccctcag 349 ||| |||||||||||||||||||| ||| |||||||||||| ||||||||||| |||| Sbjct: 105317 caaacctcccaagtgcaagttccc-acagggtttcttccacccaaatgtctatccttcag 105375 Query: 350 gaacagtctgcctttcaatcctcaatgaggacag 383 | ||||||||||||||||| || ||||| ||||| Sbjct: 105376 ggacagtctgcctttcaattcttaatgaagacag 105409 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 151 ttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcactgc 210 ||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||| Sbjct: 103088 ttcgtcgccaagccggagacgttggccgacgggacggtcaacctcatgatctggcactgc 103147 Query: 211 accatccccggcaagcaaggg 231 || |||||||||||||||||| Sbjct: 103148 acaatccccggcaagcaaggg 103168 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 85 ggggggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccc 144 ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 102912 gggggaatcgcgcgcggccgcctcgcggaggagcggaaggcgtggcggaagaaccaccca 102971 Query: 145 cacg 148 |||| Sbjct: 102972 cacg 102975 Score = 89.7 bits (45), Expect = 8e-15 Identities = 71/80 (88%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 ||||||||||||||||| || ||||| || ||||||||||| |||||| ||||||||| | Sbjct: 105496 tggagacctgctattaccgtcaagcaaattcttgttggaatccaggacttgcttgatcag 105555 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 105556 cctaatcctgctgatcctgc 105575
>ref|XM_473636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 483 Score = 149 bits (75), Expect = 1e-32 Identities = 138/159 (86%) Strand = Plus / Plus Query: 91 atcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccacggc 150 ||||| |||| ||||||||| |||||||||||||| ||||| |||||||||||||| ||| Sbjct: 19 atcgcccgcgcccgcctcgccgaggagcgcaaggcgtggcgcaagaaccacccccatggc 78 Query: 151 ttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcactgc 210 ||||| |||||||||||||| ||| || || | ||||||||||||||||||| ||| Sbjct: 79 ttcgtggccaagccggagaccctgccggatgggtccgtcaacctcatggtctggcgatgc 138 Query: 211 accatccccggcaagcaagggactgattgggaaggtgga 249 | |||||||||||| |||||||||||||||| |||||| Sbjct: 139 atcatccccggcaaagaagggactgattgggagggtgga 177
>dbj|D29718.1|RICYK31 Oryza sativa mRNA, partial homologous to pPLB07 Length = 299 Score = 121 bits (61), Expect = 2e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 352 acagtctgcctttcaatcctcaatgaggacagtggctggagacctgctattactgtgaag 411 ||||||||||||||||| || ||||| ||||| || ||||||||||||||||| || ||| Sbjct: 3 acagtctgcctttcaattcttaatgaagacagcggttggagacctgctattaccgtcaag 62 Query: 412 canatccttgttggaattcaggacctgcttgatctgccgaatcctgctgaccctgc 467 || || ||||||||||| |||||| ||||||||| ||| ||||||||||| ||||| Sbjct: 63 caaattcttgttggaatccaggacttgcttgatcagcctaatcctgctgatcctgc 118
>gb|AY022066.1| Oryza sativa microsatellite MRG4391 containing (TC)X14, closest to marker C721, genomic sequence Length = 228 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 231 gactgattgggaaggtggaaactaccctctcacccttcatttctctgaggattaccctag 290 ||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||| Sbjct: 137 gactgattgggaaggtggatactttcctctcactcttcatttcagtgaggattaccctag 196 Query: 291 caagcctcccaagtgcaagttccc 314 ||| |||||||||||||||||||| Sbjct: 197 caaacctcccaagtgcaagttccc 220
>gb|AF008910.1|AF008910 Prunus armeniaca ubiquitin-conjugating enzyme mRNA, partial cds Length = 651 Score = 109 bits (55), Expect = 8e-21 Identities = 168/206 (81%) Strand = Plus / Plus Query: 262 acccttcatttctctgaggattaccctagcaagcctcccaagtgcaagttccccacaaat 321 |||||||| ||| ||| || ||||||||||||||||| ||||| || ||||| || | Sbjct: 82 acccttcacttcagtgaagactaccctagcaagcctccaaagtgtaaattcccaccaggt 141 Query: 322 ttcttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggac 381 ||||||||||| ||||| ||||| || ||||| || || || ||||| || ||||||||| Sbjct: 142 ttcttccacccaaatgtatatccatctggaactgtttgtctatcaattcttaatgaggac 201 Query: 382 agtggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgctt 441 ||||| |||||||| || || || |||||||| || ||||| || |||||||| | || Sbjct: 202 agtggttggagaccagcaataaccgtgaagcaaattcttgtgggcattcaggatttactg 261 Query: 442 gatctgccgaatcctgctgaccctgc 467 |||| ||| ||||||||||| ||||| Sbjct: 262 gatcagccaaatcctgctgatcctgc 287
>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete sequence Length = 105841 Score = 103 bits (52), Expect = 5e-19 Identities = 129/152 (84%), Gaps = 2/152 (1%) Strand = Plus / Minus Query: 235 gattgggaaggtggaaactaccctctcacccttcatttctctgaggattaccctagcaag 294 |||||||||||||| |||||||||| |||||||| ||| |||||| || |||||||| Sbjct: 45116 gattgggaaggtgggtactaccctcttacccttcacttcagtgaggactatcctagcaaa 45057 Query: 295 cctcccaagtgcaagttccccaca-aatttcttccacccgaatgtctatccctcaggaac 353 || |||||||||||||| |||||| || |||||||| ||||||||||| |||||||| Sbjct: 45056 ccacccaagtgcaagtt-cccacagggctttttccacccaaatgtctatccttcaggaac 44998 Query: 354 agtctgcctttcaatcctcaatgaggacagtg 385 ||| ||||| ||||| || |||||||| |||| Sbjct: 44997 agtgtgcctctcaattcttaatgaggatagtg 44966 Score = 103 bits (52), Expect = 5e-19 Identities = 75/83 (90%) Strand = Plus / Minus Query: 385 ggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgat 444 ||||||||||||||||| ||||| ||||| |||||||||||||| |||||| |||||||| Sbjct: 44891 ggctggagacctgctatcactgtaaagcagatccttgttggaatacaggacttgcttgat 44832 Query: 445 ctgccgaatcctgctgaccctgc 467 | ||| ||||||||||| ||||| Sbjct: 44831 cagccaaatcctgctgatcctgc 44809 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 88 gggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccac 147 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 47528 gggatcgcacgcggccgcctcgcggaggagcgcaaggcctggcggaagaaccaccctcac 47469 Query: 148 g 148 | Sbjct: 47468 g 47468 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 151 ttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcactgc 210 ||||| || |||||||||||| ||| |||||| ||| ||||||||| ||||||||||| Sbjct: 47372 ttcgtggcgaagccggagacgatggccgacgggtcggcgaacctcatgatctggcactgc 47313 Query: 211 accatccccggcaagca 227 ||||||||||||||||| Sbjct: 47312 accatccccggcaagca 47296
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 103 bits (52), Expect = 5e-19 Identities = 129/152 (84%), Gaps = 2/152 (1%) Strand = Plus / Minus Query: 235 gattgggaaggtggaaactaccctctcacccttcatttctctgaggattaccctagcaag 294 |||||||||||||| |||||||||| |||||||| ||| |||||| || |||||||| Sbjct: 20329614 gattgggaaggtgggtactaccctcttacccttcacttcagtgaggactatcctagcaaa 20329555 Query: 295 cctcccaagtgcaagttccccaca-aatttcttccacccgaatgtctatccctcaggaac 353 || |||||||||||||| |||||| || |||||||| ||||||||||| |||||||| Sbjct: 20329554 ccacccaagtgcaagtt-cccacagggctttttccacccaaatgtctatccttcaggaac 20329496 Query: 354 agtctgcctttcaatcctcaatgaggacagtg 385 ||| ||||| ||||| || |||||||| |||| Sbjct: 20329495 agtgtgcctctcaattcttaatgaggatagtg 20329464 Score = 103 bits (52), Expect = 5e-19 Identities = 75/83 (90%) Strand = Plus / Minus Query: 385 ggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgat 444 ||||||||||||||||| ||||| ||||| |||||||||||||| |||||| |||||||| Sbjct: 20329389 ggctggagacctgctatcactgtaaagcagatccttgttggaatacaggacttgcttgat 20329330 Query: 445 ctgccgaatcctgctgaccctgc 467 | ||| ||||||||||| ||||| Sbjct: 20329329 cagccaaatcctgctgatcctgc 20329307 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 88 gggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccac 147 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 20332026 gggatcgcacgcggccgcctcgcggaggagcgcaaggcctggcggaagaaccaccctcac 20331967 Query: 148 g 148 | Sbjct: 20331966 g 20331966 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 151 ttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcactgc 210 ||||| || |||||||||||| ||| |||||| ||| ||||||||| ||||||||||| Sbjct: 20331870 ttcgtggcgaagccggagacgatggccgacgggtcggcgaacctcatgatctggcactgc 20331811 Query: 211 accatccccggcaagca 227 ||||||||||||||||| Sbjct: 20331810 accatccccggcaagca 20331794
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 103 bits (52), Expect = 5e-19 Identities = 129/152 (84%), Gaps = 2/152 (1%) Strand = Plus / Minus Query: 235 gattgggaaggtggaaactaccctctcacccttcatttctctgaggattaccctagcaag 294 |||||||||||||| |||||||||| |||||||| ||| |||||| || |||||||| Sbjct: 20340886 gattgggaaggtgggtactaccctcttacccttcacttcagtgaggactatcctagcaaa 20340827 Query: 295 cctcccaagtgcaagttccccaca-aatttcttccacccgaatgtctatccctcaggaac 353 || |||||||||||||| |||||| || |||||||| ||||||||||| |||||||| Sbjct: 20340826 ccacccaagtgcaagtt-cccacagggctttttccacccaaatgtctatccttcaggaac 20340768 Query: 354 agtctgcctttcaatcctcaatgaggacagtg 385 ||| ||||| ||||| || |||||||| |||| Sbjct: 20340767 agtgtgcctctcaattcttaatgaggatagtg 20340736 Score = 103 bits (52), Expect = 5e-19 Identities = 75/83 (90%) Strand = Plus / Minus Query: 385 ggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgat 444 ||||||||||||||||| ||||| ||||| |||||||||||||| |||||| |||||||| Sbjct: 20340661 ggctggagacctgctatcactgtaaagcagatccttgttggaatacaggacttgcttgat 20340602 Query: 445 ctgccgaatcctgctgaccctgc 467 | ||| ||||||||||| ||||| Sbjct: 20340601 cagccaaatcctgctgatcctgc 20340579 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 88 gggatcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccacccccac 147 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 20343298 gggatcgcacgcggccgcctcgcggaggagcgcaaggcctggcggaagaaccaccctcac 20343239 Query: 148 g 148 | Sbjct: 20343238 g 20343238 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 151 ttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcactgc 210 ||||| || |||||||||||| ||| |||||| ||| ||||||||| ||||||||||| Sbjct: 20343142 ttcgtggcgaagccggagacgatggccgacgggtcggcgaacctcatgatctggcactgc 20343083 Query: 211 accatccccggcaagca 227 ||||||||||||||||| Sbjct: 20343082 accatccccggcaagca 20343066
>emb|CT025837.1| Medicago truncatula chromosome 5 clone mth2-28f11, COMPLETE SEQUENCE Length = 99258 Score = 91.7 bits (46), Expect = 2e-15 Identities = 72/81 (88%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| || |||||||| |||||||| || ||||| ||||||||||||| | Sbjct: 24331 tggagacctgctataacagtgaagcaaatccttgtgggtattcaagacctgcttgatcag 24390 Query: 448 ccgaatcctgctgaccctgcc 468 || || ||||||||||||||| Sbjct: 24391 ccaaaccctgctgaccctgcc 24411
>emb|AJ457186.2|PEU457186 Populus euramericana mRNA for putative ubiquitin-conjugating enzyme (ubc gene) Length = 866 Score = 89.7 bits (45), Expect = 8e-15 Identities = 122/148 (82%) Strand = Plus / Plus Query: 321 tttcttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgagga 380 |||||||||||| ||||| ||||| || ||||| || ||| | |||||||| || ||||| Sbjct: 318 tttcttccaccctaatgtatatccatctggaactgtttgcttgtcaatccttaacgagga 377 Query: 381 cagtggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgct 440 |||||| |||||||| || || || |||||||| || ||||| || || |||||| |||| Sbjct: 378 cagtggatggagaccagccatcacagtgaagcagattcttgtgggtatccaggacttgct 437 Query: 441 tgatctgccgaatcctgctgaccctgcc 468 || | ||| ||||||||||| |||||| Sbjct: 438 ggaccagccaaatcctgctgatcctgcc 465 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 196 atggtctggcactgcaccatccccggcaagcaagggactgattgggaaggtgg 248 ||||||||||| ||||| ||||| || || | || ||||||||||||||||| Sbjct: 193 atggtctggcattgcacaatccctggaaaacttggtactgattgggaaggtgg 245
>gb|DQ430208.1| Sorghum propinquum locus pSB1814 genomic sequence Length = 374 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430207.1| Sorghum bicolor voucher PI585454 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430206.1| Sorghum bicolor voucher PI267539 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430205.1| Sorghum bicolor voucher PI267408 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430204.1| Sorghum bicolor voucher PI221607 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430203.1| Sorghum bicolor voucher PI152702 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430202.1| Sorghum bicolor voucher NSL92371 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430201.1| Sorghum bicolor voucher NSL87902 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430200.1| Sorghum bicolor voucher NSL87666 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430199.1| Sorghum bicolor voucher NSL77217 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430198.1| Sorghum bicolor voucher NSL77034 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430197.1| Sorghum bicolor voucher NSL56174 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430196.1| Sorghum bicolor voucher NSL56003 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430195.1| Sorghum bicolor voucher NSL55243 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430194.1| Sorghum bicolor voucher NSL51365 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430193.1| Sorghum bicolor voucher NSL51030 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430192.1| Sorghum bicolor voucher NSL50875 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>gb|DQ430191.1| Sorghum bicolor voucher BTx623 locus pSB1814 genomic sequence Length = 373 Score = 85.7 bits (43), Expect = 1e-13 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Plus Query: 283 taccctagcaagcctcccaagtgcaagttccccacaaa-tttcttccacccgaatgtcta 341 ||||| |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| || Sbjct: 7 tacccaagcaagcctcccaaatgcaagttccc-acagggttttttccacccaaatgttta 65 Query: 342 tccctcaggaacagtctgcctttcaatcctcaatgagga 380 ||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 66 tccttcaggaacagtctgcctctcaattctcaatgagga 104 Score = 81.8 bits (41), Expect = 2e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||||||||| ||||| ||||| || || |||||||| |||||| ||||||||| | Sbjct: 198 tggagacctgctatcactgttaagcagattctagttggaatacaggacttgcttgatcag 257 Query: 448 ccgaatcctgctgaccctgc 467 || ||||||||||| ||||| Sbjct: 258 cccaatcctgctgatcctgc 277
>emb|AJ580839.1|NBE580839 Nicotiana benthamiana mRNA for SUMO E2 conjugating enzyme SCE1 (sce1 gene) Length = 591 Score = 79.8 bits (40), Expect = 7e-12 Identities = 120/147 (81%) Strand = Plus / Plus Query: 322 ttcttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggac 381 |||||||| |||||||||||||| ||||||||||| ||| | || |||||||| || || Sbjct: 340 ttcttccatccgaatgtctatccatcaggaacagtttgcttgtcgatcctcaacgaagat 399 Query: 382 agtggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgctt 441 || || ||||||||||| ||||| ||||| || || || ||||| || || ||| || | Sbjct: 400 agcggttggagacctgccattacagtgaaacagatactggttggtatccaagacttgtta 459 Query: 442 gatctgccgaatcctgctgaccctgcc 468 |||| ||| || |||||||| |||||| Sbjct: 460 gatcagccaaaccctgctgatcctgcc 486
>dbj|AK121581.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037C10, full insert sequence Length = 555 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 187 gtcaacctcatggtctggcactgcaccatccccggcaagcaagggactgattgggaaggt 246 ||||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||| Sbjct: 12 gtcaacctcatggtctggcgatgcatcatccccggcaaagaagggactgattgggagggt 71 Query: 247 gga 249 ||| Sbjct: 72 gga 74
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23, complete sequence Length = 149892 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 91 atcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccaccccca 146 ||||| |||| ||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 68253 atcgcccgcgcccgcctcgccgaggagcgcaaggcgtggcgcaagaaccaccccca 68198 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 148 ggcttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcac 207 |||||||| |||||||||||||| ||| || || | ||||||||||||||||||| Sbjct: 68051 ggcttcgtggccaagccggagaccctgccggatgggtccgtcaacctcatggtctggcga 67992 Query: 208 tgcaccatccccggcaa 224 |||| |||||||||||| Sbjct: 67991 tgcatcatccccggcaa 67975
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 91 atcgcgcgcggccgcctcgcggaggagcgcaaggcatggcggaagaaccaccccca 146 ||||| |||| ||||||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 29265207 atcgcccgcgcccgcctcgccgaggagcgcaaggcgtggcgcaagaaccaccccca 29265152 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 148 ggcttcgtcgccaagccggagacgctgggcgacggcacggtcaacctcatggtctggcac 207 |||||||| |||||||||||||| ||| || || | ||||||||||||||||||| Sbjct: 29265005 ggcttcgtggccaagccggagaccctgccggatgggtccgtcaacctcatggtctggcga 29264946 Query: 208 tgcaccatccccggcaa 224 |||| |||||||||||| Sbjct: 29264945 tgcatcatccccggcaa 29264929
>ref|NM_115649.1| Arabidopsis thaliana AHUS5; ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G57870 (AHUS5) mRNA, complete cds Length = 735 Score = 63.9 bits (32), Expect = 4e-07 Identities = 115/143 (80%) Strand = Plus / Plus Query: 325 ttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagt 384 |||||||| ||||||||||| || ||||| ||||| || || ||||| || ||||| | Sbjct: 315 ttccaccctaatgtctatccatctggaactgtctgtctctctatccttaacgaggattat 374 Query: 385 ggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgat 444 || |||||||| || || || |||||||| || |||||||| |||||||| | ||||| Sbjct: 375 ggatggagaccagccatcaccgtgaagcagattcttgttggtattcaggatttacttgac 434 Query: 445 ctgccgaatcctgctgaccctgc 467 |||||||| ||||||||||| Sbjct: 435 acaccgaatcccgctgaccctgc 457 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gggactgattgggaaggtgga 249 ||||||||||||||||||||| Sbjct: 219 gggactgattgggaaggtgga 239
>gb|AY042838.1| Arabidopsis thaliana E2 ubiquitin-conjugating-like enzyme Ahus5 (T10K17.8) mRNA, complete cds Length = 735 Score = 63.9 bits (32), Expect = 4e-07 Identities = 115/143 (80%) Strand = Plus / Plus Query: 325 ttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagt 384 |||||||| ||||||||||| || ||||| ||||| || || ||||| || ||||| | Sbjct: 315 ttccaccctaatgtctatccatctggaactgtctgtctctctatccttaacgaggattat 374 Query: 385 ggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgat 444 || |||||||| || || || |||||||| || |||||||| |||||||| | ||||| Sbjct: 375 ggatggagaccagccatcaccgtgaagcagattcttgttggtattcaggatttacttgac 434 Query: 445 ctgccgaatcctgctgaccctgc 467 |||||||| ||||||||||| Sbjct: 435 acaccgaatcccgctgaccctgc 457 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gggactgattgggaaggtgga 249 ||||||||||||||||||||| Sbjct: 219 gggactgattgggaaggtgga 239
>gb|BT003377.1| Arabidopsis thaliana E2 ubiquitin-conjugating-like enzyme Ahus5 (At3g57870) mRNA, complete cds Length = 583 Score = 63.9 bits (32), Expect = 4e-07 Identities = 115/143 (80%) Strand = Plus / Plus Query: 325 ttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagt 384 |||||||| ||||||||||| || ||||| ||||| || || ||||| || ||||| | Sbjct: 247 ttccaccctaatgtctatccatctggaactgtctgtctctctatccttaacgaggattat 306 Query: 385 ggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgat 444 || |||||||| || || || |||||||| || |||||||| |||||||| | ||||| Sbjct: 307 ggatggagaccagccatcaccgtgaagcagattcttgttggtattcaggatttacttgac 366 Query: 445 ctgccgaatcctgctgaccctgc 467 |||||||| ||||||||||| Sbjct: 367 acaccgaatcccgctgaccctgc 389 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gggactgattgggaaggtgga 249 ||||||||||||||||||||| Sbjct: 151 gggactgattgggaaggtgga 171
>gb|U44976.1|ATU44976 Arabidopsis thaliana ubiquitin-conjugating enzyme (Ahus5) mRNA, complete cds Length = 824 Score = 63.9 bits (32), Expect = 4e-07 Identities = 115/143 (80%) Strand = Plus / Plus Query: 325 ttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgaggacagt 384 |||||||| ||||||||||| || ||||| ||||| || || ||||| || ||||| | Sbjct: 294 ttccaccctaatgtctatccatctggaactgtctgtctctctatccttaacgaggattat 353 Query: 385 ggctggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgat 444 || |||||||| || || || |||||||| || |||||||| |||||||| | ||||| Sbjct: 354 ggatggagaccagccatcaccgtgaagcagattcttgttggtattcaggatttacttgac 413 Query: 445 ctgccgaatcctgctgaccctgc 467 |||||||| ||||||||||| Sbjct: 414 acaccgaatcccgctgaccctgc 436 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 gggactgattgggaaggtgga 249 ||||||||||||||||||||| Sbjct: 198 gggactgattgggaaggtgga 218
>gb|AY110981.1| Zea mays CL44238_1 mRNA sequence Length = 626 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 187 gtcaacctcatggtctggcactgcaccatccccggcaagcaagggactgattgggaaggt 246 ||||| |||||| ||||| ||||| | ||||||||||| |||| |||||||||||||| Sbjct: 555 gtcaatctcatgctctggaactgcgtcgtccccggcaagaaaggccctgattgggaaggt 496 Query: 247 gga 249 ||| Sbjct: 495 gga 493
>dbj|AB225143.1| Aspergillus oryzae cDNA, contig sequence: AoEST1994 Length = 597 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 328 cacccgaatgtctatccctcaggaacagtctgcctttcaat 368 |||||||||||||| |||||||| || |||||||| ||||| Sbjct: 378 cacccgaatgtctacccctcaggcaccgtctgcctctcaat 418
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 328 cacccgaatgtctatccctcaggaacagtctgcctttcaat 368 |||||||||||||| |||||||| || |||||||| ||||| Sbjct: 2349175 cacccgaatgtctacccctcaggcaccgtctgcctctcaat 2349135
>emb|X54701.1|LPPLB07M L.polyphyllus pPLB07 mRNA Length = 377 Score = 50.1 bits (25), Expect = 0.007 Identities = 66/80 (82%) Strand = Plus / Plus Query: 389 ggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctgc 448 ||||||| ||||| || |||||||| || |||||||| || || || ||||||| | || Sbjct: 1 ggagaccagctataacagtgaagcaaattcttgttggcatccaagatttgcttgaccagc 60 Query: 449 cgaatcctgctgaccctgcc 468 | ||||||||||| |||||| Sbjct: 61 caaatcctgctgatcctgcc 80
>gb|AY190745.1| Pagrus major ubiquitin-conjugating enzyme E2I mRNA, complete cds Length = 1130 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 113 aggagcgcaaggcatggcggaagaacca 140 ||||||||||||||||||||||| |||| Sbjct: 105 aggagcgcaaggcatggcggaaggacca 132
>gb|AY522634.1| Oreochromis mossambicus ubiquitin-conjugating enzyme Ubc9 chain A-like mRNA, partial sequence Length = 726 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 113 aggagcgcaaggcatggcggaagaacca 140 ||||||||||||||||||||||| |||| Sbjct: 160 aggagcgcaaggcatggcggaaggacca 187
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 99 cggccgcctcgcggaggagcgcaaggcatg 128 |||||||||||||||||| ||| ||||||| Sbjct: 735017 cggccgcctcgcggaggatcgccaggcatg 735046
>gb|AC111017.23| Mus musculus chromosome 13, clone RP23-62F4, complete sequence Length = 239344 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 340 tatccctcaggaacagtctgcc 361 |||||||||||||||||||||| Sbjct: 68360 tatccctcaggaacagtctgcc 68381
>ref|NM_001016408.2| Xenopus tropicalis hypothetical protein LOC549162 (LOC549162), mRNA Length = 1393 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 328 cacccgaatgtctatccctcaggaacagt 356 ||||||||||||||||| ||||| ||||| Sbjct: 256 cacccgaatgtctatccttcaggcacagt 284
>gb|BC059506.1| Danio rerio ubiquitin-conjugating enzyme E2I, mRNA (cDNA clone MGC:73145 IMAGE:4791246), complete cds Length = 1290 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 331 ccgaatgtctatccctcaggaacagtctgcctttcaatcct 371 |||||||| ||||| ||||||||||| || ||||| ||||| Sbjct: 378 ccgaatgtgtatccgtcaggaacagtgtgtctttccatcct 418
>emb|AL133353.6| Human DNA sequence from clone RP11-483F11 on chromosome 10 Contains the gene for lysosomal apyrase-like protein 1 (LALP1), the COX15 gene for COX15 homolog, cytochrome c oxidase assembly protein (yeast), the gene for CGI-32 protein (CGI-32), the 5' end of the ABCC2 gene for ATP-binding cassette, sub-family C (CFTR/MRP), member 2, an estrogen receptor binding site associated antigen 9 (EBAG9) pseudogene, a novel pseudogene, a novel gene and two CpG islands, complete sequence Length = 159204 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 aatgaggacagtggctggaga 393 ||||||||||||||||||||| Sbjct: 106149 aatgaggacagtggctggaga 106169
>emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 6/7 Length = 326301 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 155 tcgccaagccggagacgctgggcgacggcacggtcaa 191 |||||||| |||||||| || ||||||||||||||| Sbjct: 178157 tcgccaagatggagacgcaggacgacggcacggtcaa 178193
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17 Length = 109016 Score = 42.1 bits (21), Expect = 1.6 Identities = 65/80 (81%) Strand = Plus / Minus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||| || || || |||||||| || |||||||| |||||||| | ||||| Sbjct: 24175 tggagaccagccatcaccgtgaagcagattcttgttggtattcaggatttacttgacaca 24116 Query: 448 ccgaatcctgctgaccctgc 467 |||||||| ||||||||||| Sbjct: 24115 ccgaatcccgctgaccctgc 24096 Score = 40.1 bits (20), Expect = 6.3 Identities = 47/56 (83%) Strand = Plus / Minus Query: 325 ttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgagga 380 |||||||| ||||||||||| || ||||| ||||| || || ||||| || ||||| Sbjct: 24330 ttccaccctaatgtctatccatctggaactgtctgtctctctatccttaacgagga 24275
>gb|AF128240.1|AF128240 Danio rerio ubiquitin-conjugating enzyme 9 (ubc9) mRNA, complete cds Length = 744 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 331 ccgaatgtctatccctcaggaacagtctgcctttcaatcct 371 |||||||| ||||| ||||||||||| || ||||| ||||| Sbjct: 311 ccgaatgtgtatccgtcaggaacagtgtgtctttccatcct 351
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ggcgacggcacggtcaacctc 195 ||||||||||||||||||||| Sbjct: 8093474 ggcgacggcacggtcaacctc 8093454
>emb|CR761123.2| Xenopus tropicalis finished cDNA, clone TEgg096h05 Length = 1393 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 328 cacccgaatgtctatccctcaggaacagt 356 ||||||||||||||||| ||||| ||||| Sbjct: 256 cacccgaatgtctatccttcaggcacagt 284
>emb|CR926257.1| Xenopus tropicalis finished cDNA, clone TEgg019l14 Length = 1179 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 328 cacccgaatgtctatccctcaggaacagt 356 ||||||||||||||||| ||||| ||||| Sbjct: 332 cacccgaatgtctatccttcaggcacagt 360
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 155 tcgccaagccggagacgctgggcgacggcacggtcaa 191 |||||||| ||||| ||| || ||||||||||||||| Sbjct: 476645 tcgccaagacggaggcgcaggacgacggcacggtcaa 476681
>gb|AF091106.1|AF091106 Arabidopsis thaliana E2 ubiquitin-conjugating-like enzyme (Ahus5) gene, complete cds Length = 1554 Score = 42.1 bits (21), Expect = 1.6 Identities = 65/80 (81%) Strand = Plus / Plus Query: 388 tggagacctgctattactgtgaagcanatccttgttggaattcaggacctgcttgatctg 447 |||||||| || || || |||||||| || |||||||| |||||||| | ||||| Sbjct: 1051 tggagaccagccatcaccgtgaagcagattcttgttggtattcaggatttacttgacaca 1110 Query: 448 ccgaatcctgctgaccctgc 467 |||||||| ||||||||||| Sbjct: 1111 ccgaatcccgctgaccctgc 1130 Score = 40.1 bits (20), Expect = 6.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 325 ttccacccgaatgtctatccctcaggaacagtctgcctttcaatcctcaatgagga 380 |||||||| ||||||||||| || ||||| ||||| || || ||||| || ||||| Sbjct: 896 ttccaccctaatgtctatccatctggaactgtctgtctctctatccttaacgagga 951
>emb|AL591936.12| Mouse DNA sequence from clone RP23-28B10 on chromosome 2, complete sequence Length = 147431 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 gcaagcaagggactgattggg 241 ||||||||||||||||||||| Sbjct: 67552 gcaagcaagggactgattggg 67572
>ref|NM_131351.2| Danio rerio ubiquitin-conjugating enzyme E2I (ube2i), mRNA Length = 1290 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 331 ccgaatgtctatccctcaggaacagtctgcctttcaatcct 371 |||||||| ||||| ||||||||||| || ||||| ||||| Sbjct: 378 ccgaatgtgtatccgtcaggaacagtgtgtctttccatcct 418
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gcgcgcggccgcctcgcgga 113 |||||||||||||||||||| Sbjct: 3192403 gcgcgcggccgcctcgcgga 3192422
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 323 tcttccacccgaatgtctatccctcaggaaca 354 ||||||| || |||||||||||||| |||||| Sbjct: 612449 tcttccatcccaatgtctatccctctggaaca 612480
>ref|XM_590972.2| PREDICTED: Bos taurus similar to Elongation factor G 1, mitochondrial precursor (mEF-G 1) (Elongation factor G1), transcript variant 1 (LOC513309), mRNA Length = 3369 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tcatggtctggcactgcacc 213 |||||||||||||||||||| Sbjct: 519 tcatggtctggcactgcacc 500
>ref|XM_875089.1| PREDICTED: Bos taurus similar to Elongation factor G 1, mitochondrial precursor (mEF-G 1) (Elongation factor G1), transcript variant 8 (LOC513309), mRNA Length = 3387 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tcatggtctggcactgcacc 213 |||||||||||||||||||| Sbjct: 519 tcatggtctggcactgcacc 500
>ref|XM_875002.1| PREDICTED: Bos taurus similar to Elongation factor G 1, mitochondrial precursor (mEF-G 1) (Elongation factor G1), transcript variant 7 (LOC513309), mRNA Length = 3393 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tcatggtctggcactgcacc 213 |||||||||||||||||||| Sbjct: 519 tcatggtctggcactgcacc 500
>ref|XM_874930.1| PREDICTED: Bos taurus similar to Elongation factor G 1, mitochondrial precursor (mEF-G 1) (Elongation factor G1), transcript variant 6 (LOC513309), mRNA Length = 3393 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tcatggtctggcactgcacc 213 |||||||||||||||||||| Sbjct: 519 tcatggtctggcactgcacc 500
>ref|XM_864958.1| PREDICTED: Bos taurus similar to Elongation factor G 1, mitochondrial precursor (mEF-G 1) (Elongation factor G1), transcript variant 3 (LOC513309), mRNA Length = 3384 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tcatggtctggcactgcacc 213 |||||||||||||||||||| Sbjct: 519 tcatggtctggcactgcacc 500
>ref|XM_426532.1| PREDICTED: Gallus gallus similar to cyclin M2; ancient conserved domain protein 2 (LOC428975), mRNA Length = 5352 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gactgattgggaaggtggaa 250 |||||||||||||||||||| Sbjct: 4790 gactgattgggaaggtggaa 4809
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcgcgcgcggccgcctcgcg 111 |||||||||||||||||||| Sbjct: 91060 tcgcgcgcggccgcctcgcg 91079
>gb|AC164634.3| Mus musculus BAC clone RP23-64E16 from chromosome 17, complete sequence Length = 204253 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tagcaagcctcccaagtgca 307 |||||||||||||||||||| Sbjct: 65855 tagcaagcctcccaagtgca 65874
>ref|XM_978841.1| PREDICTED: Mus musculus hypothetical protein LOC670067 (LOC670067), mRNA Length = 604 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atcgcgcgcggccgcctcgc 110 |||||||||||||||||||| Sbjct: 160 atcgcgcgcggccgcctcgc 141
>ref|XM_897347.2| PREDICTED: Mus musculus RIKEN cDNA 1810026B05 gene, transcript variant 2 (1810026B05Rik), mRNA Length = 603 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atcgcgcgcggccgcctcgc 110 |||||||||||||||||||| Sbjct: 159 atcgcgcgcggccgcctcgc 140
>ref|XM_980342.1| PREDICTED: Mus musculus hypothetical protein LOC675231 (LOC675231), mRNA Length = 743 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atcgcgcgcggccgcctcgc 110 |||||||||||||||||||| Sbjct: 299 atcgcgcgcggccgcctcgc 280
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gcgcgcggccgcctcgcgga 113 |||||||||||||||||||| Sbjct: 134066 gcgcgcggccgcctcgcgga 134047 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gcgcgcggccgcctcgcgga 113 |||||||||||||||||||| Sbjct: 108947 gcgcgcggccgcctcgcgga 108966
>ref|XM_534320.2| PREDICTED: Canis familiaris similar to G elongation factor, mitochondrial 1 (LOC477128), mRNA Length = 3186 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tcatggtctggcactgcacc 213 |||||||||||||||||||| Sbjct: 529 tcatggtctggcactgcacc 510
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gcgcgcggccgcctcgcgga 113 |||||||||||||||||||| Sbjct: 131566 gcgcgcggccgcctcgcgga 131547 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 gcgcgcggccgcctcgcgga 113 |||||||||||||||||||| Sbjct: 106652 gcgcgcggccgcctcgcgga 106671
>ref|XM_572712.1| Cryptococcus neoformans var. neoformans JEC21 ubiquitin-conjugating enzyme e2-18 kda (CNI02210) partial mRNA Length = 603 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 323 tcttccacccgaatgtctatccctcaggaaca 354 ||||||| || |||||||||||||| |||||| Sbjct: 266 tcttccatcccaatgtctatccctctggaaca 297
>ref|XM_806914.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506933.10) partial mRNA Length = 780 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cctcgcggaggagcgcaagg 124 |||||||||||||||||||| Sbjct: 54 cctcgcggaggagcgcaagg 73
>emb|AL589862.28| Human DNA sequence from clone GS1-165F21 on chromosome 10 Contains the 5' end of the PAX2 gene for paired box gene 2 and fifteen CpG islands, complete sequence Length = 187101 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cctctcacccttcatttctc 275 |||||||||||||||||||| Sbjct: 154109 cctctcacccttcatttctc 154128
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcgcgcgcggccgcctcgcg 111 |||||||||||||||||||| Sbjct: 1486595 tcgcgcgcggccgcctcgcg 1486614
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ggcgacggcacggtcaacct 194 |||||||||||||||||||| Sbjct: 140069 ggcgacggcacggtcaacct 140088
>emb|CR392331.15| Zebrafish DNA sequence from clone CH211-9F23 in linkage group 4, complete sequence Length = 170278 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 aaactaccctctcacccttc 268 |||||||||||||||||||| Sbjct: 43030 aaactaccctctcacccttc 43049
>dbj|AK140938.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130076G01 product:unclassifiable, full insert sequence Length = 5138 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atcgcgcgcggccgcctcgc 110 |||||||||||||||||||| Sbjct: 161 atcgcgcgcggccgcctcgc 142
>dbj|AK221714.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-87-M17 Length = 1854 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggactgattgggaaggtgga 249 |||||||||||||||||||| Sbjct: 1285 ggactgattgggaaggtgga 1304
>gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, complete sequence Length = 195263 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atcgcgcgcggccgcctcgc 110 |||||||||||||||||||| Sbjct: 154157 atcgcgcgcggccgcctcgc 154138
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gggatcgcgcgcggccgcct 107 |||||||||||||||||||| Sbjct: 1838845 gggatcgcgcgcggccgcct 1838826
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cgcgcgcggccgcctcgcgg 112 |||||||||||||||||||| Sbjct: 93484 cgcgcgcggccgcctcgcgg 93503
>gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermediate transcription control protein (BICP4) gene, complete cds Length = 8113 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gcgcgcggccgcctcgcgga 113 |||||||||||||||||||| Sbjct: 4379 gcgcgcggccgcctcgcgga 4360
>gb|L14321.1|HSBBICP4B Bovine herpesvirus type 1 immedidate-early transcriptional control protein (BICP4) gene, 5' end Length = 2764 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gcgcgcggccgcctcgcgga 113 |||||||||||||||||||| Sbjct: 1627 gcgcgcggccgcctcgcgga 1608 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,483,730 Number of Sequences: 3902068 Number of extensions: 3483730 Number of successful extensions: 65312 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64354 Number of HSP's gapped (non-prelim): 935 length of query: 468 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 446 effective length of database: 17,147,199,772 effective search space: 7647651098312 effective search space used: 7647651098312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
