ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet120c10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_197038.1| Oryza sativa (japonica cultivar-group) putative... 280 3e-72
2gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 gen... 280 3e-72
3gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 geno... 280 3e-72
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 280 3e-72
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 280 3e-72
6gb|AF065435.1|AF065435 Glycine max nodulin mRNA, complete cds 103 4e-19
7ref|NM_197049.1| Oryza sativa (japonica cultivar-group) putative... 88 2e-14
8gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09,... 84 3e-13
9ref|NM_197047.1| Oryza sativa (japonica cultivar-group) putative... 80 5e-12
10emb|CT009553.4| M.truncatula DNA sequence from clone MTH2-115C19... 66 8e-08
11ref|NM_122435.2| Arabidopsis thaliana unknown protein AT5G25260 ... 64 3e-07
12gb|AC006259.1| Arabidopsis thaliana BAC F21J6 from chromosome V,... 64 3e-07
13gb|BT023420.1| Arabidopsis thaliana At5g25260 gene, complete cds 64 3e-07
14gb|AC174291.12| Medicago truncatula clone mth2-58k14, complete s... 52 0.001
15ref|NM_125885.2| Arabidopsis thaliana unknown protein AT5G64870 ... 44 0.30
16emb|BX830484.1|CNS0A1EH Arabidopsis thaliana Full-length cDNA Co... 44 0.30
17emb|BX830969.1|CNS0A0PW Arabidopsis thaliana Full-length cDNA Co... 44 0.30
18gb|AY085257.1| Arabidopsis thaliana clone 142026 mRNA, complete ... 44 0.30
19dbj|AB019236.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.30
20emb|AL389891.1|NCB7F18 Neurospora crassa DNA linkage group I BAC... 42 1.2
21emb|AL389890.1|NCB24P7 Neurospora crassa DNA linkage group I BAC... 42 1.2
22emb|BX649412.8| Zebrafish DNA sequence from clone DKEY-116G10 in... 42 1.2
23gb|AY781412.1| Chlamydomonas incerta pyruvate dehydrogenase kina... 40 4.7
24ref|XM_774139.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 4.7
25gb|AF387365.1|AF387365 Chlamydomonas reinhardtii pyruvate dehydr... 40 4.7
26ref|XM_392185.2| PREDICTED: Apis mellifera similar to CG3822-PA ... 40 4.7
27gb|AY659987.1| Macropus eugenii prion protein PrP (PRNP) gene, c... 40 4.7

>ref|NM_197038.1| Oryza sativa (japonica cultivar-group) putative nodulin
           (OSJNBa0012L23.36), mRNA
          Length = 1458

 Score =  280 bits (141), Expect = 3e-72
 Identities = 207/229 (90%)
 Strand = Plus / Plus

                                                                       
Query: 108 atgggtttcgtgtaccgaatcgcgagcccgtccgagtacctggccatcaccgggtacggc 167
           ||||| |||| |||| | ||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 1   atggggttcgcgtacaggatcgcgagcgcgtcggagtacctggcgatcaccgggtacggc 60

                                                                       
Query: 168 gtggacgacgtgaagctggcaaagaaggcgtggatcgcgccggggcagcggtgcgcgcgc 227
            | | ||||||||||||||| |||||||||||| | |||||||||||||||||| | |||
Sbjct: 61  atcgccgacgtgaagctggcgaagaaggcgtgggtggcgccggggcagcggtgcacccgc 120

                                                                       
Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
           ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 ttcgatatctccccggtgaactacaccttcgaggtgcaggccatgagcgccgagaagctc 180

                                                            
Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccccgcgcggacgacg 336
           |||||| | ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 181 cccttcatcctcccggccgtcttcaccatcggcccccgcgccgacgacg 229



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>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence,
            complete sequence
          Length = 153182

 Score =  280 bits (141), Expect = 3e-72
 Identities = 207/229 (90%)
 Strand = Plus / Plus

                                                                        
Query: 108  atgggtttcgtgtaccgaatcgcgagcccgtccgagtacctggccatcaccgggtacggc 167
            ||||| |||| |||| | ||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 9061 atggggttcgcgtacaggatcgcgagcgcgtcggagtacctggcgatcaccgggtacggc 9120

                                                                        
Query: 168  gtggacgacgtgaagctggcaaagaaggcgtggatcgcgccggggcagcggtgcgcgcgc 227
             | | ||||||||||||||| |||||||||||| | |||||||||||||||||| | |||
Sbjct: 9121 atcgccgacgtgaagctggcgaagaaggcgtgggtggcgccggggcagcggtgcacccgc 9180

                                                                        
Query: 228  ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
            ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 9181 ttcgatatctccccggtgaactacaccttcgaggtgcaggccatgagcgccgagaagctc 9240

                                                             
Query: 288  cccttcgtgctccccgccgtcttcaccatcggcccccgcgcggacgacg 336
            |||||| | ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 9241 cccttcatcctcccggccgtcttcaccatcggcccccgcgccgacgacg 9289



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                         
Query: 228   ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
             ||||||||||| || |||||||||  |||| | ||| ||||||||||| |||||||||| 
Sbjct: 67124 ttcgacatctcgccggtgaactacgagttcaacgtggaggccatgagctccgagaagctg 67065

                                                 
Query: 288   cccttcgtgctccccgccgtcttcaccatcggcccc 323
              |||||   |||||||||||||||||||||||||||
Sbjct: 67064 gccttcaatctccccgccgtcttcaccatcggcccc 67029



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                         
Query: 256   tcgaggtgcaggccatgagcgccgagaagctccccttcgtgctccccgccgtcttcacca 315
             |||| ||||||||||||||| |||||||||| ||||||  ||||||||||| || |||||
Sbjct: 57569 tcgacgtgcaggccatgagctccgagaagctgcccttcaggctccccgccgcctacacca 57510

                     
Query: 316   tcggcccc 323
             ||||||||
Sbjct: 57509 tcggcccc 57502



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 133   gcccgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaaga 192
             ||||||| |||||||||||||||||||| |  ||  | ||||||||||||||||| ||||
Sbjct: 67219 gcccgtcggagtacctggccatcaccggctggggaatcgacgacgtgaagctggcgaaga 67160

                     
Query: 193   aggcgtgg 200
             ||||||||
Sbjct: 67159 aggcgtgg 67152



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                         
Query: 136   cgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaagaagg 195
             |||| ||||||||||||||||| || |  ||  | ||||||||||||||||| |||||||
Sbjct: 57689 cgtcggagtacctggccatcacgggctgggggatcgacgacgtgaagctggcgaagaagg 57630

                  
Query: 196   cgtgg 200
             |||||
Sbjct: 57629 cgtgg 57625



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>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete
             sequence
          Length = 178692

 Score =  280 bits (141), Expect = 3e-72
 Identities = 207/229 (90%)
 Strand = Plus / Minus

                                                                         
Query: 108   atgggtttcgtgtaccgaatcgcgagcccgtccgagtacctggccatcaccgggtacggc 167
             ||||| |||| |||| | ||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 20689 atggggttcgcgtacaggatcgcgagcgcgtcggagtacctggcgatcaccgggtacggc 20630

                                                                         
Query: 168   gtggacgacgtgaagctggcaaagaaggcgtggatcgcgccggggcagcggtgcgcgcgc 227
              | | ||||||||||||||| |||||||||||| | |||||||||||||||||| | |||
Sbjct: 20629 atcgccgacgtgaagctggcgaagaaggcgtgggtggcgccggggcagcggtgcacccgc 20570

                                                                         
Query: 228   ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
             ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 20569 ttcgatatctccccggtgaactacaccttcgaggtgcaggccatgagcgccgagaagctc 20510

                                                              
Query: 288   cccttcgtgctccccgccgtcttcaccatcggcccccgcgcggacgacg 336
             |||||| | ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 20509 cccttcatcctcccggccgtcttcaccatcggcccccgcgccgacgacg 20461



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  280 bits (141), Expect = 3e-72
 Identities = 207/229 (90%)
 Strand = Plus / Plus

                                                                            
Query: 108      atgggtttcgtgtaccgaatcgcgagcccgtccgagtacctggccatcaccgggtacggc 167
                ||||| |||| |||| | ||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 17653942 atggggttcgcgtacaggatcgcgagcgcgtcggagtacctggcgatcaccgggtacggc 17654001

                                                                            
Query: 168      gtggacgacgtgaagctggcaaagaaggcgtggatcgcgccggggcagcggtgcgcgcgc 227
                 | | ||||||||||||||| |||||||||||| | |||||||||||||||||| | |||
Sbjct: 17654002 atcgccgacgtgaagctggcgaagaaggcgtgggtggcgccggggcagcggtgcacccgc 17654061

                                                                            
Query: 228      ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
                ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 17654062 ttcgatatctccccggtgaactacaccttcgaggtgcaggccatgagcgccgagaagctc 17654121

                                                                 
Query: 288      cccttcgtgctccccgccgtcttcaccatcggcccccgcgcggacgacg 336
                |||||| | ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 17654122 cccttcatcctcccggccgtcttcaccatcggcccccgcgccgacgacg 17654170



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                            
Query: 228      ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
                ||||||||||| || |||||||||  |||| | ||| ||||||||||| |||||||||| 
Sbjct: 17712004 ttcgacatctcgccggtgaactacgagttcaacgtggaggccatgagctccgagaagctg 17711945

                                                    
Query: 288      cccttcgtgctccccgccgtcttcaccatcggcccc 323
                 |||||   |||||||||||||||||||||||||||
Sbjct: 17711944 gccttcaatctccccgccgtcttcaccatcggcccc 17711909



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                            
Query: 256      tcgaggtgcaggccatgagcgccgagaagctccccttcgtgctccccgccgtcttcacca 315
                |||| ||||||||||||||| |||||||||| ||||||  ||||||||||| || |||||
Sbjct: 17702449 tcgacgtgcaggccatgagctccgagaagctgcccttcaggctccccgccgcctacacca 17702390

                        
Query: 316      tcggcccc 323
                ||||||||
Sbjct: 17702389 tcggcccc 17702382



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                            
Query: 133      gcccgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaaga 192
                ||||||| |||||||||||||||||||| |  ||  | ||||||||||||||||| ||||
Sbjct: 17712099 gcccgtcggagtacctggccatcaccggctggggaatcgacgacgtgaagctggcgaaga 17712040

                        
Query: 193      aggcgtgg 200
                ||||||||
Sbjct: 17712039 aggcgtgg 17712032



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 136      cgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaagaagg 195
                |||| ||||||||||||||||| || |  ||  | ||||||||||||||||| |||||||
Sbjct: 17702569 cgtcggagtacctggccatcacgggctgggggatcgacgacgtgaagctggcgaagaagg 17702510

                     
Query: 196      cgtgg 200
                |||||
Sbjct: 17702509 cgtgg 17702505



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  280 bits (141), Expect = 3e-72
 Identities = 207/229 (90%)
 Strand = Plus / Plus

                                                                            
Query: 108      atgggtttcgtgtaccgaatcgcgagcccgtccgagtacctggccatcaccgggtacggc 167
                ||||| |||| |||| | ||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 17662982 atggggttcgcgtacaggatcgcgagcgcgtcggagtacctggcgatcaccgggtacggc 17663041

                                                                            
Query: 168      gtggacgacgtgaagctggcaaagaaggcgtggatcgcgccggggcagcggtgcgcgcgc 227
                 | | ||||||||||||||| |||||||||||| | |||||||||||||||||| | |||
Sbjct: 17663042 atcgccgacgtgaagctggcgaagaaggcgtgggtggcgccggggcagcggtgcacccgc 17663101

                                                                            
Query: 228      ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
                ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 17663102 ttcgatatctccccggtgaactacaccttcgaggtgcaggccatgagcgccgagaagctc 17663161

                                                                 
Query: 288      cccttcgtgctccccgccgtcttcaccatcggcccccgcgcggacgacg 336
                |||||| | ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 17663162 cccttcatcctcccggccgtcttcaccatcggcccccgcgccgacgacg 17663210



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                            
Query: 228      ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
                ||||||||||| || |||||||||  |||| | ||| ||||||||||| |||||||||| 
Sbjct: 17721257 ttcgacatctcgccggtgaactacgagttcaacgtggaggccatgagctccgagaagctg 17721198

                                                    
Query: 288      cccttcgtgctccccgccgtcttcaccatcggcccc 323
                 |||||   |||||||||||||||||||||||||||
Sbjct: 17721197 gccttcaatctccccgccgtcttcaccatcggcccc 17721162



 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                            
Query: 256      tcgaggtgcaggccatgagcgccgagaagctccccttcgtgctccccgccgtcttcacca 315
                |||| ||||||||||||||| |||||||||| ||||||  ||||||||||| || |||||
Sbjct: 17711702 tcgacgtgcaggccatgagctccgagaagctgcccttcaggctccccgccgcctacacca 17711643

                        
Query: 316      tcggcccc 323
                ||||||||
Sbjct: 17711642 tcggcccc 17711635



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                            
Query: 133      gcccgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaaga 192
                ||||||| |||||||||||||||||||| |  ||  | ||||||||||||||||| ||||
Sbjct: 17721352 gcccgtcggagtacctggccatcaccggctggggaatcgacgacgtgaagctggcgaaga 17721293

                        
Query: 193      aggcgtgg 200
                ||||||||
Sbjct: 17721292 aggcgtgg 17721285



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 136      cgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaagaagg 195
                |||| ||||||||||||||||| || |  ||  | ||||||||||||||||| |||||||
Sbjct: 17711822 cgtcggagtacctggccatcacgggctgggggatcgacgacgtgaagctggcgaagaagg 17711763

                     
Query: 196      cgtgg 200
                |||||
Sbjct: 17711762 cgtgg 17711758



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>gb|AF065435.1|AF065435 Glycine max nodulin mRNA, complete cds
          Length = 1617

 Score =  103 bits (52), Expect = 4e-19
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                       
Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
           |||||| |||| || ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 161 ttcgacctctctccggtgaactacaccttcgaggttcaggccatgagcgccgagaagctc 220

                                           
Query: 288 cccttcgtgctccccgccgtcttcaccatcgg 319
           || ||| | ||||| || ||||||||||||||
Sbjct: 221 cctttcattctccctgcagtcttcaccatcgg 252



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>ref|NM_197049.1| Oryza sativa (japonica cultivar-group) putative nodulin
           (OSJNBa0012L23.46), mRNA
          Length = 1500

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                       
Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
           ||||||||||| || |||||||||  |||| | ||| ||||||||||| |||||||||| 
Sbjct: 118 ttcgacatctcgccggtgaactacgagttcaacgtggaggccatgagctccgagaagctg 177

                                               
Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccc 323
            |||||   |||||||||||||||||||||||||||
Sbjct: 178 gccttcaatctccccgccgtcttcaccatcggcccc 213



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 133 gcccgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaaga 192
           ||||||| |||||||||||||||||||| |  ||  | ||||||||||||||||| ||||
Sbjct: 23  gcccgtcggagtacctggccatcaccggctggggaatcgacgacgtgaagctggcgaaga 82

                   
Query: 193 aggcgtgg 200
           ||||||||
Sbjct: 83  aggcgtgg 90



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>gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09, complete sequence
          Length = 132099

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 246   aactacacgttcgaggtgcaggccatgagcgccgagaagctccccttcgtgctccccgcc 305
             ||||||||||||||||| |||||||||||  ||||||||||||| || ||  ||||||||
Sbjct: 62762 aactacacgttcgaggtccaggccatgagttccgagaagctcccttttgtcatccccgcc 62703

                           
Query: 306   gtcttcaccatcgg 319
             || |||||||||||
Sbjct: 62702 gttttcaccatcgg 62689



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>ref|NM_197047.1| Oryza sativa (japonica cultivar-group) putative nodulin
           (OSJNBa0012L23.44), mRNA
          Length = 1455

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 256 tcgaggtgcaggccatgagcgccgagaagctccccttcgtgctccccgccgtcttcacca 315
           |||| ||||||||||||||| |||||||||| ||||||  ||||||||||| || |||||
Sbjct: 146 tcgacgtgcaggccatgagctccgagaagctgcccttcaggctccccgccgcctacacca 205

                   
Query: 316 tcggcccc 323
           ||||||||
Sbjct: 206 tcggcccc 213



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 136 cgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaagaagg 195
           |||| ||||||||||||||||| || |  ||  | ||||||||||||||||| |||||||
Sbjct: 26  cgtcggagtacctggccatcacgggctgggggatcgacgacgtgaagctggcgaagaagg 85

                
Query: 196 cgtgg 200
           |||||
Sbjct: 86  cgtgg 90



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>emb|CT009553.4| M.truncatula DNA sequence from clone MTH2-115C19 on chromosome 3,
             complete sequence
          Length = 125987

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                         
Query: 227   cttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagct 286
             ||||||| |||| || ||||||||||| ||||| || || |||||||| || || || ||
Sbjct: 48591 cttcgacctctcaccggtgaactacaccttcgaagttcaagccatgagtgctgaaaaact 48650

                                              
Query: 287   ccccttcgtgctccccgccgtcttcaccatcgg 319
             ||| ||||| ||||| ||||||||||| |||||
Sbjct: 48651 ccctttcgtcctccctgccgtcttcacaatcgg 48683



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 270   atgagcgccgagaagctccccttcgtgctccccgccgtcttcac 313
             ||||| |||||||| || || || || |||||||||||||||||
Sbjct: 68647 atgagtgccgagaaacttccttttgttctccccgccgtcttcac 68690



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>ref|NM_122435.2| Arabidopsis thaliana unknown protein AT5G25260 mRNA, complete cds
          Length = 1459

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctccccttcgtgctcccc 302
           ||||||||||| ||| | || || |||||||| || ||||||||||| ||||| ||||| 
Sbjct: 194 gtgaactacactttcaaagtccaagccatgagtgcagagaagctccctttcgttctccct 253

                               
Query: 303 gccgtcttcaccatcggccc 322
           || |||||||| ||||||||
Sbjct: 254 gctgtcttcactatcggccc 273



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>gb|AC006259.1| Arabidopsis thaliana BAC F21J6 from chromosome V, containing KNAT3 and
             mapping near 60.5 cM, complete sequence
          Length = 110680

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 243   gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctccccttcgtgctcccc 302
             ||||||||||| ||| | || || |||||||| || ||||||||||| ||||| ||||| 
Sbjct: 89164 gtgaactacactttcaaagtccaagccatgagtgcagagaagctccctttcgttctccct 89223

                                 
Query: 303   gccgtcttcaccatcggccc 322
             || |||||||| ||||||||
Sbjct: 89224 gctgtcttcactatcggccc 89243



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>gb|BT023420.1| Arabidopsis thaliana At5g25260 gene, complete cds
          Length = 1451

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctccccttcgtgctcccc 302
           ||||||||||| ||| | || || |||||||| || ||||||||||| ||||| ||||| 
Sbjct: 134 gtgaactacactttcaaagtccaagccatgagtgcagagaagctccctttcgttctccct 193

                               
Query: 303 gccgtcttcaccatcggccc 322
           || |||||||| ||||||||
Sbjct: 194 gctgtcttcactatcggccc 213



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>gb|AC174291.12| Medicago truncatula clone mth2-58k14, complete sequence
          Length = 117627

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                         
Query: 228   ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287
             |||||| |||| || ||||||||||| ||||| || || |||||||| ||||| || || 
Sbjct: 50965 ttcgacctctctccggtgaactacaccttcgaagttcaagccatgagtgccgaaaaactg 51024

                                       
Query: 288   cccttcgtgctccccgccgtcttcac 313
             || ||||| || ||||| ||||||||
Sbjct: 51025 cctttcgttcttcccgctgtcttcac 51050



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>ref|NM_125885.2| Arabidopsis thaliana unknown protein AT5G64870 mRNA, complete cds
          Length = 1754

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctcccctt 292
           |||||||||||||||||||| || || |||||  ||||||| || |||||
Sbjct: 206 gtgaactacacgttcgaggttcaagctatgagttccgagaaacttccctt 255



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>emb|BX830484.1|CNS0A1EH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB84ZF09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1586

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctcccctt 292
           |||||||||||||||||||| || || |||||  ||||||| || |||||
Sbjct: 184 gtgaactacacgttcgaggttcaagctatgagttccgagaaacttccctt 233



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>emb|BX830969.1|CNS0A0PW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS43ZD06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1673

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctcccctt 292
           |||||||||||||||||||| || || |||||  ||||||| || |||||
Sbjct: 184 gtgaactacacgttcgaggttcaagctatgagttccgagaaacttccctt 233



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>gb|AY085257.1| Arabidopsis thaliana clone 142026 mRNA, complete sequence
          Length = 1753

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctcccctt 292
           |||||||||||||||||||| || || |||||  ||||||| || |||||
Sbjct: 206 gtgaactacacgttcgaggttcaagctatgagttccgagaaacttccctt 255



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>dbj|AB019236.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK3
          Length = 81494

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 243   gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctcccctt 292
             |||||||||||||||||||| || || |||||  ||||||| || |||||
Sbjct: 28514 gtgaactacacgttcgaggttcaagctatgagttccgagaaacttccctt 28465



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>emb|AL389891.1|NCB7F18 Neurospora crassa DNA linkage group I BAC clone B7F18
          Length = 71088

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 296   gctccccgccgtcttcaccat 316
             |||||||||||||||||||||
Sbjct: 64534 gctccccgccgtcttcaccat 64514



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>emb|AL389890.1|NCB24P7 Neurospora crassa DNA linkage group I BAC clone B24P7
          Length = 77715

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 296   gctccccgccgtcttcaccat 316
             |||||||||||||||||||||
Sbjct: 15079 gctccccgccgtcttcaccat 15059



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>emb|BX649412.8| Zebrafish DNA sequence from clone DKEY-116G10 in linkage group 1,
             complete sequence
          Length = 78932

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    tgattccttggcttgtcttgc 104
             |||||||||||||||||||||
Sbjct: 69718 tgattccttggcttgtcttgc 69738



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>gb|AY781412.1| Chlamydomonas incerta pyruvate dehydrogenase kinase-like protein
            (pdk) gene, complete cds
          Length = 7295

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 151  ccatcaccgggtacggcgtggacg 174
            ||||| ||||||||||||||||||
Sbjct: 5095 ccatccccgggtacggcgtggacg 5118



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>ref|XM_774139.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_137_94011_96314)
            partial mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  ggtgcgcgcgcttcgacatc 236
            ||||||||||||||||||||
Sbjct: 1867 ggtgcgcgcgcttcgacatc 1886



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>gb|AF387365.1|AF387365 Chlamydomonas reinhardtii pyruvate dehydrogenase kinase-like protein
            (pdk) gene, complete cds
          Length = 5813

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 151  ccatcaccgggtacggcgtggacg 174
            ||||| ||||||||||||||||||
Sbjct: 4681 ccatccccgggtacggcgtggacg 4704



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>ref|XM_392185.2| PREDICTED: Apis mellifera similar to CG3822-PA (LOC408645), mRNA
          Length = 2823

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  tacacgttcgaggtgcaggc 268
            ||||||||||||||||||||
Sbjct: 1495 tacacgttcgaggtgcaggc 1514



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>gb|AY659987.1| Macropus eugenii prion protein PrP (PRNP) gene, complete cds
          Length = 66512

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    taccctgcatatatcctgca 59
             ||||||||||||||||||||
Sbjct: 65557 taccctgcatatatcctgca 65538


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,921,474
Number of Sequences: 3902068
Number of extensions: 1921474
Number of successful extensions: 36062
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35968
Number of HSP's gapped (non-prelim): 86
length of query: 353
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 331
effective length of database: 17,147,199,772
effective search space: 5675723124532
effective search space used: 5675723124532
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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