| Clone Name | baet120c10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197038.1| Oryza sativa (japonica cultivar-group) putative nodulin (OSJNBa0012L23.36), mRNA Length = 1458 Score = 280 bits (141), Expect = 3e-72 Identities = 207/229 (90%) Strand = Plus / Plus Query: 108 atgggtttcgtgtaccgaatcgcgagcccgtccgagtacctggccatcaccgggtacggc 167 ||||| |||| |||| | ||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 1 atggggttcgcgtacaggatcgcgagcgcgtcggagtacctggcgatcaccgggtacggc 60 Query: 168 gtggacgacgtgaagctggcaaagaaggcgtggatcgcgccggggcagcggtgcgcgcgc 227 | | ||||||||||||||| |||||||||||| | |||||||||||||||||| | ||| Sbjct: 61 atcgccgacgtgaagctggcgaagaaggcgtgggtggcgccggggcagcggtgcacccgc 120 Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 121 ttcgatatctccccggtgaactacaccttcgaggtgcaggccatgagcgccgagaagctc 180 Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccccgcgcggacgacg 336 |||||| | ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 181 cccttcatcctcccggccgtcttcaccatcggcccccgcgccgacgacg 229
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 280 bits (141), Expect = 3e-72 Identities = 207/229 (90%) Strand = Plus / Plus Query: 108 atgggtttcgtgtaccgaatcgcgagcccgtccgagtacctggccatcaccgggtacggc 167 ||||| |||| |||| | ||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 9061 atggggttcgcgtacaggatcgcgagcgcgtcggagtacctggcgatcaccgggtacggc 9120 Query: 168 gtggacgacgtgaagctggcaaagaaggcgtggatcgcgccggggcagcggtgcgcgcgc 227 | | ||||||||||||||| |||||||||||| | |||||||||||||||||| | ||| Sbjct: 9121 atcgccgacgtgaagctggcgaagaaggcgtgggtggcgccggggcagcggtgcacccgc 9180 Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9181 ttcgatatctccccggtgaactacaccttcgaggtgcaggccatgagcgccgagaagctc 9240 Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccccgcgcggacgacg 336 |||||| | ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 9241 cccttcatcctcccggccgtcttcaccatcggcccccgcgccgacgacg 9289 Score = 87.7 bits (44), Expect = 2e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 ||||||||||| || ||||||||| |||| | ||| ||||||||||| |||||||||| Sbjct: 67124 ttcgacatctcgccggtgaactacgagttcaacgtggaggccatgagctccgagaagctg 67065 Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccc 323 ||||| ||||||||||||||||||||||||||| Sbjct: 67064 gccttcaatctccccgccgtcttcaccatcggcccc 67029 Score = 79.8 bits (40), Expect = 5e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 256 tcgaggtgcaggccatgagcgccgagaagctccccttcgtgctccccgccgtcttcacca 315 |||| ||||||||||||||| |||||||||| |||||| ||||||||||| || ||||| Sbjct: 57569 tcgacgtgcaggccatgagctccgagaagctgcccttcaggctccccgccgcctacacca 57510 Query: 316 tcggcccc 323 |||||||| Sbjct: 57509 tcggcccc 57502 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 133 gcccgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaaga 192 ||||||| |||||||||||||||||||| | || | ||||||||||||||||| |||| Sbjct: 67219 gcccgtcggagtacctggccatcaccggctggggaatcgacgacgtgaagctggcgaaga 67160 Query: 193 aggcgtgg 200 |||||||| Sbjct: 67159 aggcgtgg 67152 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 136 cgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaagaagg 195 |||| ||||||||||||||||| || | || | ||||||||||||||||| ||||||| Sbjct: 57689 cgtcggagtacctggccatcacgggctgggggatcgacgacgtgaagctggcgaagaagg 57630 Query: 196 cgtgg 200 ||||| Sbjct: 57629 cgtgg 57625
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 280 bits (141), Expect = 3e-72 Identities = 207/229 (90%) Strand = Plus / Minus Query: 108 atgggtttcgtgtaccgaatcgcgagcccgtccgagtacctggccatcaccgggtacggc 167 ||||| |||| |||| | ||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 20689 atggggttcgcgtacaggatcgcgagcgcgtcggagtacctggcgatcaccgggtacggc 20630 Query: 168 gtggacgacgtgaagctggcaaagaaggcgtggatcgcgccggggcagcggtgcgcgcgc 227 | | ||||||||||||||| |||||||||||| | |||||||||||||||||| | ||| Sbjct: 20629 atcgccgacgtgaagctggcgaagaaggcgtgggtggcgccggggcagcggtgcacccgc 20570 Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 20569 ttcgatatctccccggtgaactacaccttcgaggtgcaggccatgagcgccgagaagctc 20510 Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccccgcgcggacgacg 336 |||||| | ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 20509 cccttcatcctcccggccgtcttcaccatcggcccccgcgccgacgacg 20461
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 280 bits (141), Expect = 3e-72 Identities = 207/229 (90%) Strand = Plus / Plus Query: 108 atgggtttcgtgtaccgaatcgcgagcccgtccgagtacctggccatcaccgggtacggc 167 ||||| |||| |||| | ||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 17653942 atggggttcgcgtacaggatcgcgagcgcgtcggagtacctggcgatcaccgggtacggc 17654001 Query: 168 gtggacgacgtgaagctggcaaagaaggcgtggatcgcgccggggcagcggtgcgcgcgc 227 | | ||||||||||||||| |||||||||||| | |||||||||||||||||| | ||| Sbjct: 17654002 atcgccgacgtgaagctggcgaagaaggcgtgggtggcgccggggcagcggtgcacccgc 17654061 Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 17654062 ttcgatatctccccggtgaactacaccttcgaggtgcaggccatgagcgccgagaagctc 17654121 Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccccgcgcggacgacg 336 |||||| | ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 17654122 cccttcatcctcccggccgtcttcaccatcggcccccgcgccgacgacg 17654170 Score = 87.7 bits (44), Expect = 2e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 ||||||||||| || ||||||||| |||| | ||| ||||||||||| |||||||||| Sbjct: 17712004 ttcgacatctcgccggtgaactacgagttcaacgtggaggccatgagctccgagaagctg 17711945 Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccc 323 ||||| ||||||||||||||||||||||||||| Sbjct: 17711944 gccttcaatctccccgccgtcttcaccatcggcccc 17711909 Score = 79.8 bits (40), Expect = 5e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 256 tcgaggtgcaggccatgagcgccgagaagctccccttcgtgctccccgccgtcttcacca 315 |||| ||||||||||||||| |||||||||| |||||| ||||||||||| || ||||| Sbjct: 17702449 tcgacgtgcaggccatgagctccgagaagctgcccttcaggctccccgccgcctacacca 17702390 Query: 316 tcggcccc 323 |||||||| Sbjct: 17702389 tcggcccc 17702382 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 133 gcccgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaaga 192 ||||||| |||||||||||||||||||| | || | ||||||||||||||||| |||| Sbjct: 17712099 gcccgtcggagtacctggccatcaccggctggggaatcgacgacgtgaagctggcgaaga 17712040 Query: 193 aggcgtgg 200 |||||||| Sbjct: 17712039 aggcgtgg 17712032 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 136 cgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaagaagg 195 |||| ||||||||||||||||| || | || | ||||||||||||||||| ||||||| Sbjct: 17702569 cgtcggagtacctggccatcacgggctgggggatcgacgacgtgaagctggcgaagaagg 17702510 Query: 196 cgtgg 200 ||||| Sbjct: 17702509 cgtgg 17702505
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 280 bits (141), Expect = 3e-72 Identities = 207/229 (90%) Strand = Plus / Plus Query: 108 atgggtttcgtgtaccgaatcgcgagcccgtccgagtacctggccatcaccgggtacggc 167 ||||| |||| |||| | ||||||||| |||| ||||||||||| ||||||||||||||| Sbjct: 17662982 atggggttcgcgtacaggatcgcgagcgcgtcggagtacctggcgatcaccgggtacggc 17663041 Query: 168 gtggacgacgtgaagctggcaaagaaggcgtggatcgcgccggggcagcggtgcgcgcgc 227 | | ||||||||||||||| |||||||||||| | |||||||||||||||||| | ||| Sbjct: 17663042 atcgccgacgtgaagctggcgaagaaggcgtgggtggcgccggggcagcggtgcacccgc 17663101 Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 17663102 ttcgatatctccccggtgaactacaccttcgaggtgcaggccatgagcgccgagaagctc 17663161 Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccccgcgcggacgacg 336 |||||| | ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 17663162 cccttcatcctcccggccgtcttcaccatcggcccccgcgccgacgacg 17663210 Score = 87.7 bits (44), Expect = 2e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 ||||||||||| || ||||||||| |||| | ||| ||||||||||| |||||||||| Sbjct: 17721257 ttcgacatctcgccggtgaactacgagttcaacgtggaggccatgagctccgagaagctg 17721198 Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccc 323 ||||| ||||||||||||||||||||||||||| Sbjct: 17721197 gccttcaatctccccgccgtcttcaccatcggcccc 17721162 Score = 79.8 bits (40), Expect = 5e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 256 tcgaggtgcaggccatgagcgccgagaagctccccttcgtgctccccgccgtcttcacca 315 |||| ||||||||||||||| |||||||||| |||||| ||||||||||| || ||||| Sbjct: 17711702 tcgacgtgcaggccatgagctccgagaagctgcccttcaggctccccgccgcctacacca 17711643 Query: 316 tcggcccc 323 |||||||| Sbjct: 17711642 tcggcccc 17711635 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 133 gcccgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaaga 192 ||||||| |||||||||||||||||||| | || | ||||||||||||||||| |||| Sbjct: 17721352 gcccgtcggagtacctggccatcaccggctggggaatcgacgacgtgaagctggcgaaga 17721293 Query: 193 aggcgtgg 200 |||||||| Sbjct: 17721292 aggcgtgg 17721285 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 136 cgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaagaagg 195 |||| ||||||||||||||||| || | || | ||||||||||||||||| ||||||| Sbjct: 17711822 cgtcggagtacctggccatcacgggctgggggatcgacgacgtgaagctggcgaagaagg 17711763 Query: 196 cgtgg 200 ||||| Sbjct: 17711762 cgtgg 17711758
>gb|AF065435.1|AF065435 Glycine max nodulin mRNA, complete cds Length = 1617 Score = 103 bits (52), Expect = 4e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 |||||| |||| || ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 161 ttcgacctctctccggtgaactacaccttcgaggttcaggccatgagcgccgagaagctc 220 Query: 288 cccttcgtgctccccgccgtcttcaccatcgg 319 || ||| | ||||| || |||||||||||||| Sbjct: 221 cctttcattctccctgcagtcttcaccatcgg 252
>ref|NM_197049.1| Oryza sativa (japonica cultivar-group) putative nodulin (OSJNBa0012L23.46), mRNA Length = 1500 Score = 87.7 bits (44), Expect = 2e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 ||||||||||| || ||||||||| |||| | ||| ||||||||||| |||||||||| Sbjct: 118 ttcgacatctcgccggtgaactacgagttcaacgtggaggccatgagctccgagaagctg 177 Query: 288 cccttcgtgctccccgccgtcttcaccatcggcccc 323 ||||| ||||||||||||||||||||||||||| Sbjct: 178 gccttcaatctccccgccgtcttcaccatcggcccc 213 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 133 gcccgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaaga 192 ||||||| |||||||||||||||||||| | || | ||||||||||||||||| |||| Sbjct: 23 gcccgtcggagtacctggccatcaccggctggggaatcgacgacgtgaagctggcgaaga 82 Query: 193 aggcgtgg 200 |||||||| Sbjct: 83 aggcgtgg 90
>gb|AC166741.1| Brassica rapa subsp. pekinensis clone KBrH080C09, complete sequence Length = 132099 Score = 83.8 bits (42), Expect = 3e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 246 aactacacgttcgaggtgcaggccatgagcgccgagaagctccccttcgtgctccccgcc 305 ||||||||||||||||| ||||||||||| ||||||||||||| || || |||||||| Sbjct: 62762 aactacacgttcgaggtccaggccatgagttccgagaagctcccttttgtcatccccgcc 62703 Query: 306 gtcttcaccatcgg 319 || ||||||||||| Sbjct: 62702 gttttcaccatcgg 62689
>ref|NM_197047.1| Oryza sativa (japonica cultivar-group) putative nodulin (OSJNBa0012L23.44), mRNA Length = 1455 Score = 79.8 bits (40), Expect = 5e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 256 tcgaggtgcaggccatgagcgccgagaagctccccttcgtgctccccgccgtcttcacca 315 |||| ||||||||||||||| |||||||||| |||||| ||||||||||| || ||||| Sbjct: 146 tcgacgtgcaggccatgagctccgagaagctgcccttcaggctccccgccgcctacacca 205 Query: 316 tcggcccc 323 |||||||| Sbjct: 206 tcggcccc 213 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 136 cgtccgagtacctggccatcaccgggtacggcgtggacgacgtgaagctggcaaagaagg 195 |||| ||||||||||||||||| || | || | ||||||||||||||||| ||||||| Sbjct: 26 cgtcggagtacctggccatcacgggctgggggatcgacgacgtgaagctggcgaagaagg 85 Query: 196 cgtgg 200 ||||| Sbjct: 86 cgtgg 90
>emb|CT009553.4| M.truncatula DNA sequence from clone MTH2-115C19 on chromosome 3, complete sequence Length = 125987 Score = 65.9 bits (33), Expect = 8e-08 Identities = 78/93 (83%) Strand = Plus / Plus Query: 227 cttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagct 286 ||||||| |||| || ||||||||||| ||||| || || |||||||| || || || || Sbjct: 48591 cttcgacctctcaccggtgaactacaccttcgaagttcaagccatgagtgctgaaaaact 48650 Query: 287 ccccttcgtgctccccgccgtcttcaccatcgg 319 ||| ||||| ||||| ||||||||||| ||||| Sbjct: 48651 ccctttcgtcctccctgccgtcttcacaatcgg 48683 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 270 atgagcgccgagaagctccccttcgtgctccccgccgtcttcac 313 ||||| |||||||| || || || || ||||||||||||||||| Sbjct: 68647 atgagtgccgagaaacttccttttgttctccccgccgtcttcac 68690
>ref|NM_122435.2| Arabidopsis thaliana unknown protein AT5G25260 mRNA, complete cds Length = 1459 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctccccttcgtgctcccc 302 ||||||||||| ||| | || || |||||||| || ||||||||||| ||||| ||||| Sbjct: 194 gtgaactacactttcaaagtccaagccatgagtgcagagaagctccctttcgttctccct 253 Query: 303 gccgtcttcaccatcggccc 322 || |||||||| |||||||| Sbjct: 254 gctgtcttcactatcggccc 273
>gb|AC006259.1| Arabidopsis thaliana BAC F21J6 from chromosome V, containing KNAT3 and mapping near 60.5 cM, complete sequence Length = 110680 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctccccttcgtgctcccc 302 ||||||||||| ||| | || || |||||||| || ||||||||||| ||||| ||||| Sbjct: 89164 gtgaactacactttcaaagtccaagccatgagtgcagagaagctccctttcgttctccct 89223 Query: 303 gccgtcttcaccatcggccc 322 || |||||||| |||||||| Sbjct: 89224 gctgtcttcactatcggccc 89243
>gb|BT023420.1| Arabidopsis thaliana At5g25260 gene, complete cds Length = 1451 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctccccttcgtgctcccc 302 ||||||||||| ||| | || || |||||||| || ||||||||||| ||||| ||||| Sbjct: 134 gtgaactacactttcaaagtccaagccatgagtgcagagaagctccctttcgttctccct 193 Query: 303 gccgtcttcaccatcggccc 322 || |||||||| |||||||| Sbjct: 194 gctgtcttcactatcggccc 213
>gb|AC174291.12| Medicago truncatula clone mth2-58k14, complete sequence Length = 117627 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 228 ttcgacatctcccctgtgaactacacgttcgaggtgcaggccatgagcgccgagaagctc 287 |||||| |||| || ||||||||||| ||||| || || |||||||| ||||| || || Sbjct: 50965 ttcgacctctctccggtgaactacaccttcgaagttcaagccatgagtgccgaaaaactg 51024 Query: 288 cccttcgtgctccccgccgtcttcac 313 || ||||| || ||||| |||||||| Sbjct: 51025 cctttcgttcttcccgctgtcttcac 51050
>ref|NM_125885.2| Arabidopsis thaliana unknown protein AT5G64870 mRNA, complete cds Length = 1754 Score = 44.1 bits (22), Expect = 0.30 Identities = 43/50 (86%) Strand = Plus / Plus Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctcccctt 292 |||||||||||||||||||| || || ||||| ||||||| || ||||| Sbjct: 206 gtgaactacacgttcgaggttcaagctatgagttccgagaaacttccctt 255
>emb|BX830484.1|CNS0A1EH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZF09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1586 Score = 44.1 bits (22), Expect = 0.30 Identities = 43/50 (86%) Strand = Plus / Plus Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctcccctt 292 |||||||||||||||||||| || || ||||| ||||||| || ||||| Sbjct: 184 gtgaactacacgttcgaggttcaagctatgagttccgagaaacttccctt 233
>emb|BX830969.1|CNS0A0PW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS43ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1673 Score = 44.1 bits (22), Expect = 0.30 Identities = 43/50 (86%) Strand = Plus / Plus Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctcccctt 292 |||||||||||||||||||| || || ||||| ||||||| || ||||| Sbjct: 184 gtgaactacacgttcgaggttcaagctatgagttccgagaaacttccctt 233
>gb|AY085257.1| Arabidopsis thaliana clone 142026 mRNA, complete sequence Length = 1753 Score = 44.1 bits (22), Expect = 0.30 Identities = 43/50 (86%) Strand = Plus / Plus Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctcccctt 292 |||||||||||||||||||| || || ||||| ||||||| || ||||| Sbjct: 206 gtgaactacacgttcgaggttcaagctatgagttccgagaaacttccctt 255
>dbj|AB019236.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK3 Length = 81494 Score = 44.1 bits (22), Expect = 0.30 Identities = 43/50 (86%) Strand = Plus / Minus Query: 243 gtgaactacacgttcgaggtgcaggccatgagcgccgagaagctcccctt 292 |||||||||||||||||||| || || ||||| ||||||| || ||||| Sbjct: 28514 gtgaactacacgttcgaggttcaagctatgagttccgagaaacttccctt 28465
>emb|AL389891.1|NCB7F18 Neurospora crassa DNA linkage group I BAC clone B7F18 Length = 71088 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gctccccgccgtcttcaccat 316 ||||||||||||||||||||| Sbjct: 64534 gctccccgccgtcttcaccat 64514
>emb|AL389890.1|NCB24P7 Neurospora crassa DNA linkage group I BAC clone B24P7 Length = 77715 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gctccccgccgtcttcaccat 316 ||||||||||||||||||||| Sbjct: 15079 gctccccgccgtcttcaccat 15059
>emb|BX649412.8| Zebrafish DNA sequence from clone DKEY-116G10 in linkage group 1, complete sequence Length = 78932 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 tgattccttggcttgtcttgc 104 ||||||||||||||||||||| Sbjct: 69718 tgattccttggcttgtcttgc 69738
>gb|AY781412.1| Chlamydomonas incerta pyruvate dehydrogenase kinase-like protein (pdk) gene, complete cds Length = 7295 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ccatcaccgggtacggcgtggacg 174 ||||| |||||||||||||||||| Sbjct: 5095 ccatccccgggtacggcgtggacg 5118
>ref|XM_774139.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_137_94011_96314) partial mRNA Length = 2304 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ggtgcgcgcgcttcgacatc 236 |||||||||||||||||||| Sbjct: 1867 ggtgcgcgcgcttcgacatc 1886
>gb|AF387365.1|AF387365 Chlamydomonas reinhardtii pyruvate dehydrogenase kinase-like protein (pdk) gene, complete cds Length = 5813 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ccatcaccgggtacggcgtggacg 174 ||||| |||||||||||||||||| Sbjct: 4681 ccatccccgggtacggcgtggacg 4704
>ref|XM_392185.2| PREDICTED: Apis mellifera similar to CG3822-PA (LOC408645), mRNA Length = 2823 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 tacacgttcgaggtgcaggc 268 |||||||||||||||||||| Sbjct: 1495 tacacgttcgaggtgcaggc 1514
>gb|AY659987.1| Macropus eugenii prion protein PrP (PRNP) gene, complete cds Length = 66512 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 taccctgcatatatcctgca 59 |||||||||||||||||||| Sbjct: 65557 taccctgcatatatcctgca 65538 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,921,474 Number of Sequences: 3902068 Number of extensions: 1921474 Number of successful extensions: 36062 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 35968 Number of HSP's gapped (non-prelim): 86 length of query: 353 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 331 effective length of database: 17,147,199,772 effective search space: 5675723124532 effective search space used: 5675723124532 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)