>ANP_NOTCO (P24856) Ice-structuring glycoprotein precursor (ISGP) (Antifreeze|
           glycopeptide polyprotein) (AFGP polyprotein) [Contains:
           AFGP7 (AFGP 7); AFGP8 (AFGP 8); AFGP8-like] (Fragment)
          Length = 790

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
 Frame = -1

Query: 398 SVACLEASETTGEASFRA--CSPALCRTGSAGFAASPSALSTTKDCXXXXXXXXXXXXXX 225
           + A   A+  T   +F A   +PA   T +  FAA+ +  +T                  
Sbjct: 415 ATAATAATPATAALNFAATAATPATAATPALIFAATAATAATPATAALHFAATAATAATP 474

Query: 224 XXTLVNDPATSSLENAAACAAGVTASNAAVDEAAISAAFH 105
               +N  AT++    AA  A + A+ AA      +AAF+
Sbjct: 475 ATAALNFAATAATPATAATPALIFAATAATAATPATAAFN 514



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
 Frame = -1

Query: 398 SVACLEASETTGEASFRA--CSPALCRTGSAGFAASPSALSTTKDCXXXXXXXXXXXXXX 225
           + A   A+  T   +F A   +PA   T +  FAA+ +  +T                  
Sbjct: 466 ATAATAATPATAALNFAATAATPATAATPALIFAATAATAATPATAAFNFAATAATAATP 525

Query: 224 XXTLVNDPATSSLENAAACAAGVTASNAAVDEAAISAAFH 105
               +N  AT++    AA  A + A+ AA      +AA +
Sbjct: 526 ATAALNFAATAATPATAATPALIFAATAATAATPATAALN 565



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/81 (23%), Positives = 31/81 (38%)
 Frame = -1

Query: 347 ACSPALCRTGSAGFAASPSALSTTKDCXXXXXXXXXXXXXXXXTLVNDPATSSLENAAAC 168
           A +PA   T +  FAA+ +  +T                      +N  AT++    AA 
Sbjct: 604 AATPATAATPALIFAATAATAATPATAALNFAATAATAATPATAALNFAATAATPATAAT 663

Query: 167 AAGVTASNAAVDEAAISAAFH 105
            A + A+ AA      +AA +
Sbjct: 664 PALIFAATAATAATPATAALN 684



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 2/98 (2%)
 Frame = -1

Query: 398 SVACLEASETTGEASFRA--CSPALCRTGSAGFAASPSALSTTKDCXXXXXXXXXXXXXX 225
           + A   A+  T   +F A   +PA   T +  FAA+ +  +T                  
Sbjct: 177 ATAATAATPATAALNFAATAATPATAATPALIFAATAATAATPATAALNFAATAATAATP 236

Query: 224 XXTLVNDPATSSLENAAACAAGVTASNAAVDEAAISAA 111
                N  AT++    AA  A + A+ AA      +AA
Sbjct: 237 ATAACNFAATAATPATAATPALIFAATAATAATPATAA 274

>NUPL2_PONPY (Q5RB98) Nucleoporin-like 2|
          Length = 423

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -1

Query: 374 ETTGEASFRACSPALCRTGSAGFAASPSALST 279
           E T  ASF   SPA    GS GF+  P++L+T
Sbjct: 294 EVTSAASFSFKSPAASSFGSPGFSGLPASLAT 325

>NUPL2_HUMAN (O15504) Nucleoporin-like 2 (NLP-1) (hCG1) (NUP42 homolog)|
          Length = 423

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -1

Query: 374 ETTGEASFRACSPALCRTGSAGFAASPSALST 279
           E T  ASF   SPA    GS GF+  P++L+T
Sbjct: 294 EVTSAASFSFKSPAASSFGSPGFSGLPASLAT 325

>Y2340_THETN (Q8R7Q8) UPF0291 protein TTE2340|
          Length = 68

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -3

Query: 342 LTGALQNRQRRLRGLA*RP--EHDKGLLGHLAADADHHIHRVHH 217
           LT   +  QRRLR    +   E  K  L +L ADA HH H  HH
Sbjct: 22  LTEEEKEEQRRLREAYVKEIKERVKRELDNLFADASHHHHHCHH 65

>ISPF_BACTN (Q8A0Y7) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC|
           4.6.1.12) (MECPS) (MECDP-synthase)
          Length = 159

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 330 LQNRQRRLRGLA*RPEHDKGLLGHLAADADHHIHRV 223
           ++ R+  L G+  R EH KGLLGH  +DAD  +H V
Sbjct: 15  VEGRELWLGGI--RLEHSKGLLGH--SDADVLLHTV 46

>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)|
          Length = 662

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 25/95 (26%), Positives = 33/95 (34%)
 Frame = -1

Query: 398 SVACLEASETTGEASFRACSPALCRTGSAGFAASPSALSTTKDCXXXXXXXXXXXXXXXX 219
           + A  E +   GEA     +PA    G A   A+ +A +T                    
Sbjct: 54  ATAAAETTAAAGEAPTTTTAPATTAAGKAPTTAAATAPTTA--AAGAPTTATGKAPATAA 111

Query: 218 TLVNDPATSSLENAAACAAGVTASNAAVDEAAISA 114
             V   A S     AA A   TA+ AA   AA +A
Sbjct: 112 APVPTTAASKAPTTAAAATHSTAAAAAPTTAASAA 146

>ISPF_BACFR (Q64P34) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC|
           4.6.1.12) (MECPS) (MECDP-synthase)
          Length = 159

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 285 EHDKGLLGHLAADADHHIHRV 223
           EH+KGLLGH  +DAD  +H +
Sbjct: 28  EHEKGLLGH--SDADVLVHAI 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.127    0.340 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,387,117
Number of Sequences: 219361
Number of extensions: 341779
Number of successful extensions: 1176
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)