| Clone Name | baet11e01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY022447.1| Oryza sativa microsatellite MRG4772 containing (AGA)X9, genomic sequence Length = 227 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 77 ccaacggagaagtagcagtacca 99 ||||| ||||||||||||||||| Sbjct: 223 ccaaccgagaagtagcagtacca 201
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ctagttgcagtacaccacc 73 ||||||||||||||||||| Sbjct: 128648 ctagttgcagtacaccacc 128666
>gb|AC156985.12| Mus musculus chromosome 7, clone RP23-417L14, complete sequence Length = 179492 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 tttccgagctgctagtgct 24 ||||||||||||||||||| Sbjct: 57500 tttccgagctgctagtgct 57482
>gb|AC127226.3| Mus musculus BAC clone RP24-500I10 from chromosome 6, complete sequence Length = 166743 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 58 gttgcagtacaccaccaagccaa 80 ||||||||| ||||||||||||| Sbjct: 153622 gttgcagtaaaccaccaagccaa 153644
>gb|AC144819.8| Mus musculus BAC clone RP23-162A11 from chromosome 14, complete sequence Length = 198432 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 tccccatcaacagttcagg 47 ||||||||||||||||||| Sbjct: 132289 tccccatcaacagttcagg 132271
>gb|AC158168.2| Mus musculus BAC clone RP23-325B1 from chromosome 6, complete sequence Length = 184841 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 58 gttgcagtacaccaccaagccaa 80 ||||||||| ||||||||||||| Sbjct: 148347 gttgcagtaaaccaccaagccaa 148325
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 ctagttgcagtacaccacc 73 ||||||||||||||||||| Sbjct: 20872847 ctagttgcagtacaccacc 20872865
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 77 ccaacggagaagtagcagtacca 99 ||||| ||||||||||||||||| Sbjct: 43164409 ccaaccgagaagtagcagtacca 43164431
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 38.2 bits (19), Expect = 4.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 77 ccaacggagaagtagcagtacca 99 ||||| ||||||||||||||||| Sbjct: 51864 ccaaccgagaagtagcagtacca 51886
>gb|AC097377.3| Homo sapiens BAC clone RP11-83F13 from 2, complete sequence Length = 158923 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 tacagtccccatcaacagt 42 ||||||||||||||||||| Sbjct: 94969 tacagtccccatcaacagt 94951
>emb|BX004992.13| Zebrafish DNA sequence from clone CH211-120E13 in linkage group 16, complete sequence Length = 195432 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 agttcaggcttacagctag 58 ||||||||||||||||||| Sbjct: 113814 agttcaggcttacagctag 113832
>gb|AC162521.4| Mus musculus chromosome 7, clone RP23-356O13, complete sequence Length = 207307 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 tttccgagctgctagtgct 24 ||||||||||||||||||| Sbjct: 15999 tttccgagctgctagtgct 16017
>gb|AC120846.16| Mus musculus chromosome 7, clone RP24-317L6, complete sequence Length = 192429 Score = 38.2 bits (19), Expect = 4.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 tttccgagctgctagtgct 24 ||||||||||||||||||| Sbjct: 110921 tttccgagctgctagtgct 110903 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 536,704 Number of Sequences: 3902068 Number of extensions: 536704 Number of successful extensions: 36031 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 35980 Number of HSP's gapped (non-prelim): 51 length of query: 104 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 83 effective length of database: 17,151,101,840 effective search space: 1423541452720 effective search space used: 1423541452720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)