| Clone Name | baet11c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018927.1| Zea mays clone Contig55.F mRNA sequence Length = 1321 Score = 426 bits (215), Expect = e-116 Identities = 374/427 (87%) Strand = Plus / Plus Query: 8 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcgttcca 67 |||||||||||||||||||||||| ||| |||| ||||| ||||| |||||||||||||| Sbjct: 139 gttagaaaatgatggtgacttcctctacttactggcagatgctgctgctattgcgttcca 198 Query: 68 atatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatggtacgga 127 |||||| ||||||||||| |||||||||||||||| |||||||||||||||||| || || Sbjct: 199 atatggtaatcctgatgtcttgtgctccccactagctgaagcaaagaagaatgggacaga 258 Query: 128 tttggtggaagcatttgctcattacgtgaacagttattatgtcgggagatttaaggcatc 187 |||||||||| |||||||| ||||||||| |||||| | || | |||| ||| || Sbjct: 259 tttggtggaaacatttgctagttacgtgaaagattattacattggaaaatttggggcgtc 318 Query: 188 agttgcatcatatgatcagaagtatttgaagaacacaactccagctgaatcttcatatag 247 ||| ||||||||||||||| | |||||||||||||||||||| |||||||| |||||||| Sbjct: 319 agtagcatcatatgatcagcaatatttgaagaacacaactcctgctgaatcctcatatag 378 Query: 248 attgtggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatga 307 | | |||||||| |||||||||||||||||| |||||||||| |||||||||||||| || Sbjct: 379 actatggtggtaccaagtttgcagtgaggttgcatatttccaggtggcaccaaaaaacga 438 Query: 308 tagcgtccgctctacaaagatcgatacaagataccatttagacttgtgcaaaaatgtttt 367 ||| || || || |||||||||| || || |||||||| |||||||||| ||||||||| Sbjct: 439 tagtgttcgttccccaaagatcgacacgaggtaccatttggacttgtgcagaaatgtttt 498 Query: 368 tggggaaggagtttatcctgatgtgtccatgacaaacttatactatggaggcacaagaat 427 || |||||||| || |||||||| | ||||||||||||||||||||||||||| |||| Sbjct: 499 cggcgaaggagtctaccctgatgtctttatgacaaacttatactatggaggcacaggaat 558 Query: 428 tgcaggt 434 ||||||| Sbjct: 559 tgcaggt 565
>gb|BT024005.1| Zea mays clone EL01N0403G06 mRNA sequence Length = 1602 Score = 418 bits (211), Expect = e-114 Identities = 373/427 (87%) Strand = Plus / Plus Query: 8 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcgttcca 67 |||||||||||||||||||||||| ||| |||| ||||| ||||| |||||||||||||| Sbjct: 637 gttagaaaatgatggtgacttcctctacttactggcagatgctgctgctattgcgttcca 696 Query: 68 atatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatggtacgga 127 |||||| ||||||||||| |||||||||||||||| |||||||||||||||||| || || Sbjct: 697 atatggtaatcctgatgtcttgtgctccccactagctgaagcaaagaagaatgggacaga 756 Query: 128 tttggtggaagcatttgctcattacgtgaacagttattatgtcgggagatttaaggcatc 187 |||||||||| |||||||| ||||||||| |||||| | || | |||| ||| || Sbjct: 757 tttggtggaaacatttgctagttacgtgaaagattattacattggaaaatttggggcgtc 816 Query: 188 agttgcatcatatgatcagaagtatttgaagaacacaactccagctgaatcttcatatag 247 ||| ||||||||||||||| | |||||||||||||||||||| |||||||| |||||||| Sbjct: 817 agtagcatcatatgatcagcaatatttgaagaacacaactcctgctgaatcctcatatag 876 Query: 248 attgtggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatga 307 | | |||||||| |||||||||||||||||| |||||||||| |||||||||||||| || Sbjct: 877 actatggtggtaccaagtttgcagtgaggttgcatatttccaggtggcaccaaaaaacga 936 Query: 308 tagcgtccgctctacaaagatcgatacaagataccatttagacttgtgcaaaaatgtttt 367 ||| || || || |||||||||| || || |||||||| |||||||||| ||||||| | Sbjct: 937 tagtgttcgttccccaaagatcgacacgaggtaccatttggacttgtgcagaaatgttct 996 Query: 368 tggggaaggagtttatcctgatgtgtccatgacaaacttatactatggaggcacaagaat 427 || |||||||| || |||||||| | ||||||||||||||||||||||||||| |||| Sbjct: 997 cggcgaaggagtctaccctgatgtctttatgacaaacttatactatggaggcacaggaat 1056 Query: 428 tgcaggt 434 ||||||| Sbjct: 1057 tgcaggt 1063
>ref|NM_197308.1| Oryza sativa (japonica cultivar-group) putative serine peptidase (OSJNBa0055O03.7), mRNA Length = 2369 Score = 408 bits (206), Expect = e-111 Identities = 376/433 (86%), Gaps = 6/433 (1%) Strand = Plus / Plus Query: 8 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcgttcca 67 ||||| |||||||||||||||||| | ||||| || || || ||||||||||||||||| Sbjct: 1299 gttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcgttcca 1358 Query: 68 atatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatggtacgga 127 ||| || |||||||||| ||||||||||||| |||||||||||||||||||||| || || Sbjct: 1359 atacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatggcacaga 1418 Query: 128 tttggtggaagcatttgctcattacgtgaacagttattatgtcgggagatttaaggcatc 187 |||||||||| ||||||||| || ||||| |||||| | || | |||| ||||| Sbjct: 1419 tttggtggaaacatttgctcgctatgtgaaagattattacataggaacatttggagcatc 1478 Query: 188 agttgcatcatatgatcagaagtatttgaagaacacaactcca------gctgaatcttc 241 |||||||||||||||||| | ||||||||||||||||||||| ||||||||| | Sbjct: 1479 agttgcatcatatgatcaagaatatttgaagaacacaactccacctcctgctgaatctgc 1538 Query: 242 atatagattgtggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaa 301 |||||| || |||||||| |||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 1539 atataggttatggtggtaccaagtttgcagtgaagttgcatatttccaagtggctccaaa 1598 Query: 302 aaatgatagcgtccgctctacaaagatcgatacaagataccatttagacttgtgcaaaaa 361 ||||||||| ||||| ||| ||||||| || ||||| |||||||| |||||||||| ||| Sbjct: 1599 aaatgatagtgtccgttctgcaaagattgacacaaggtaccatttggacttgtgcagaaa 1658 Query: 362 tgtttttggggaaggagtttatcctgatgtgtccatgacaaacttatactatggaggcac 421 ||||||||||||||||||||| |||||||| | ||||||||| ||||||||||||||||| Sbjct: 1659 tgtttttggggaaggagtttaccctgatgtattcatgacaaatttatactatggaggcac 1718 Query: 422 aagaattgcaggt 434 ||||||||||||| Sbjct: 1719 aagaattgcaggt 1731
>dbj|AK070496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054G22, full insert sequence Length = 1986 Score = 408 bits (206), Expect = e-111 Identities = 376/433 (86%), Gaps = 6/433 (1%) Strand = Plus / Plus Query: 8 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcgttcca 67 ||||| |||||||||||||||||| | ||||| || || || ||||||||||||||||| Sbjct: 904 gttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcgttcca 963 Query: 68 atatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatggtacgga 127 ||| || |||||||||| ||||||||||||| |||||||||||||||||||||| || || Sbjct: 964 atacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatggcacaga 1023 Query: 128 tttggtggaagcatttgctcattacgtgaacagttattatgtcgggagatttaaggcatc 187 |||||||||| ||||||||| || ||||| |||||| | || | |||| ||||| Sbjct: 1024 tttggtggaaacatttgctcgctatgtgaaagattattacataggaacatttggagcatc 1083 Query: 188 agttgcatcatatgatcagaagtatttgaagaacacaactcca------gctgaatcttc 241 |||||||||||||||||| | ||||||||||||||||||||| ||||||||| | Sbjct: 1084 agttgcatcatatgatcaagaatatttgaagaacacaactccacctcctgctgaatctgc 1143 Query: 242 atatagattgtggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaa 301 |||||| || |||||||| |||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 1144 atataggttatggtggtaccaagtttgcagtgaagttgcatatttccaagtggctccaaa 1203 Query: 302 aaatgatagcgtccgctctacaaagatcgatacaagataccatttagacttgtgcaaaaa 361 ||||||||| ||||| ||| ||||||| || ||||| |||||||| |||||||||| ||| Sbjct: 1204 aaatgatagtgtccgttctgcaaagattgacacaaggtaccatttggacttgtgcagaaa 1263 Query: 362 tgtttttggggaaggagtttatcctgatgtgtccatgacaaacttatactatggaggcac 421 ||||||||||||||||||||| |||||||| | ||||||||| ||||||||||||||||| Sbjct: 1264 tgtttttggggaaggagtttaccctgatgtattcatgacaaatttatactatggaggcac 1323 Query: 422 aagaattgcaggt 434 ||||||||||||| Sbjct: 1324 aagaattgcaggt 1336
>ref|NM_197310.1| Oryza sativa (japonica cultivar-group) putative serine peptidase (OSJNBa0055O03.8), mRNA Length = 1509 Score = 165 bits (83), Expect = 1e-37 Identities = 155/179 (86%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatgatagc 311 ||||||| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 1054 tggtggttccaagtttgcagtgaggttgcctattttcaagtggcacccaaaaacgatagc 1113 Query: 312 gtccgctctacaaagatcgatacaagataccatttagacttgtgcaaaaatgtttttggg 371 | ||||||||| ||||| ||||| | |||||||| ||| | |||| |||||| ||||| Sbjct: 1114 attcgctctacagagatcaatacagggtaccatttggacctatgcagaaatgtctttggt 1173 Query: 372 gaaggagtttatcctgatgtgtccatgacaaacttatactatggaggcacaagaattgc 430 ||||| |||||||||||||||| |||||||||||| || || ||||||||||||||||| Sbjct: 1174 gaaggtgtttatcctgatgtgttcatgacaaacttgtattacggaggcacaagaattgc 1232
>dbj|AK073197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022B10, full insert sequence Length = 2075 Score = 165 bits (83), Expect = 1e-37 Identities = 155/179 (86%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatgatagc 311 ||||||| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 1090 tggtggttccaagtttgcagtgaggttgcctattttcaagtggcacccaaaaacgatagc 1149 Query: 312 gtccgctctacaaagatcgatacaagataccatttagacttgtgcaaaaatgtttttggg 371 | ||||||||| ||||| ||||| | |||||||| ||| | |||| |||||| ||||| Sbjct: 1150 attcgctctacagagatcaatacagggtaccatttggacctatgcagaaatgtctttggt 1209 Query: 372 gaaggagtttatcctgatgtgtccatgacaaacttatactatggaggcacaagaattgc 430 ||||| |||||||||||||||| |||||||||||| || || ||||||||||||||||| Sbjct: 1210 gaaggtgtttatcctgatgtgttcatgacaaacttgtattacggaggcacaagaattgc 1268
>gb|AC073867.6| Oryza sativa chromosome 10 BAC OSJNBa0055O03 genomic sequence, complete sequence Length = 82909 Score = 143 bits (72), Expect = 5e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 339 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 398 |||||||| |||||||||| |||||||||||||||||||||||| |||||||| | |||| Sbjct: 13779 taccatttggacttgtgcagaaatgtttttggggaaggagtttaccctgatgtattcatg 13838 Query: 399 acaaacttatactatggaggcacaagaattgcaggt 434 ||||| |||||||||||||||||||||||||||||| Sbjct: 13839 acaaatttatactatggaggcacaagaattgcaggt 13874 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 241 catatagattgtggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaa 300 ||||||| || |||||||| |||||||||||||| ||| |||||||||||||||| |||| Sbjct: 13532 catataggttatggtggtaccaagtttgcagtgaagttgcatatttccaagtggctccaa 13591 Query: 301 aaaatgatagcgtccgctctacaaagatcgatacaag 337 |||||||||| ||||| ||| ||||||| || ||||| Sbjct: 13592 aaaatgatagtgtccgttctgcaaagattgacacaag 13628 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 62 gttccaatatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatgg 121 ||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 13004 gttccaatacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatgg 13063 Query: 122 tacggatttggtgg 135 || |||||||||| Sbjct: 13064 cacagatttggtgg 13077 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 339 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 398 |||||||| ||| | |||| |||||| ||||| ||||| |||||||||||||||| |||| Sbjct: 23435 taccatttggacctatgcagaaatgtctttggtgaaggtgtttatcctgatgtgttcatg 23494 Query: 399 acaaacttatactatggaggcacaagaattgc 430 |||||||| || || ||||||||||||||||| Sbjct: 23495 acaaacttgtattacggaggcacaagaattgc 23526 Score = 79.8 bits (40), Expect = 7e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatgatagc 311 ||||||| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 23013 tggtggttccaagtttgcagtgaggttgcctattttcaagtggcacccaaaaacgatagc 23072 Query: 312 gtccgctctacaaagatcgataca 335 | ||||||||| ||||| ||||| Sbjct: 23073 attcgctctacagagatcaataca 23096 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 183 gcatcagttgcatcatatgatcagaagtatttgaagaacacaactcca 230 ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 13339 gcatcagttgcatcatatgatcaagaatatttgaagaacacaactcca 13386 Score = 46.1 bits (23), Expect = 0.095 Identities = 47/55 (85%) Strand = Plus / Plus Query: 8 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcg 62 ||||| |||||||||||||||||| | ||||| || || || |||||||||||| Sbjct: 12871 gttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcg 12925
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 143 bits (72), Expect = 5e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 339 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 398 |||||||| |||||||||| |||||||||||||||||||||||| |||||||| | |||| Sbjct: 19161435 taccatttggacttgtgcagaaatgtttttggggaaggagtttaccctgatgtattcatg 19161494 Query: 399 acaaacttatactatggaggcacaagaattgcaggt 434 ||||| |||||||||||||||||||||||||||||| Sbjct: 19161495 acaaatttatactatggaggcacaagaattgcaggt 19161530 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 241 catatagattgtggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaa 300 ||||||| || |||||||| |||||||||||||| ||| |||||||||||||||| |||| Sbjct: 19161188 catataggttatggtggtaccaagtttgcagtgaagttgcatatttccaagtggctccaa 19161247 Query: 301 aaaatgatagcgtccgctctacaaagatcgatacaag 337 |||||||||| ||||| ||| ||||||| || ||||| Sbjct: 19161248 aaaatgatagtgtccgttctgcaaagattgacacaag 19161284 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 62 gttccaatatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatgg 121 ||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 19160660 gttccaatacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatgg 19160719 Query: 122 tacggatttggtgg 135 || |||||||||| Sbjct: 19160720 cacagatttggtgg 19160733 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 339 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 398 |||||||| ||| | |||| |||||| ||||| ||||| |||||||||||||||| |||| Sbjct: 19171091 taccatttggacctatgcagaaatgtctttggtgaaggtgtttatcctgatgtgttcatg 19171150 Query: 399 acaaacttatactatggaggcacaagaattgc 430 |||||||| || || ||||||||||||||||| Sbjct: 19171151 acaaacttgtattacggaggcacaagaattgc 19171182 Score = 79.8 bits (40), Expect = 7e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatgatagc 311 ||||||| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 19170669 tggtggttccaagtttgcagtgaggttgcctattttcaagtggcacccaaaaacgatagc 19170728 Query: 312 gtccgctctacaaagatcgataca 335 | ||||||||| ||||| ||||| Sbjct: 19170729 attcgctctacagagatcaataca 19170752 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 183 gcatcagttgcatcatatgatcagaagtatttgaagaacacaactcca 230 ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 19160995 gcatcagttgcatcatatgatcaagaatatttgaagaacacaactcca 19161042 Score = 46.1 bits (23), Expect = 0.095 Identities = 47/55 (85%) Strand = Plus / Plus Query: 8 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcg 62 ||||| |||||||||||||||||| | ||||| || || || |||||||||||| Sbjct: 19160527 gttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcg 19160581
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 143 bits (72), Expect = 5e-31 Identities = 90/96 (93%) Strand = Plus / Plus Query: 339 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 398 |||||||| |||||||||| |||||||||||||||||||||||| |||||||| | |||| Sbjct: 19172711 taccatttggacttgtgcagaaatgtttttggggaaggagtttaccctgatgtattcatg 19172770 Query: 399 acaaacttatactatggaggcacaagaattgcaggt 434 ||||| |||||||||||||||||||||||||||||| Sbjct: 19172771 acaaatttatactatggaggcacaagaattgcaggt 19172806 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 241 catatagattgtggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaa 300 ||||||| || |||||||| |||||||||||||| ||| |||||||||||||||| |||| Sbjct: 19172464 catataggttatggtggtaccaagtttgcagtgaagttgcatatttccaagtggctccaa 19172523 Query: 301 aaaatgatagcgtccgctctacaaagatcgatacaag 337 |||||||||| ||||| ||| ||||||| || ||||| Sbjct: 19172524 aaaatgatagtgtccgttctgcaaagattgacacaag 19172560 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 62 gttccaatatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatgg 121 ||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 19171936 gttccaatacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatgg 19171995 Query: 122 tacggatttggtgg 135 || |||||||||| Sbjct: 19171996 cacagatttggtgg 19172009 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 339 taccatttagacttgtgcaaaaatgtttttggggaaggagtttatcctgatgtgtccatg 398 |||||||| ||| | |||| |||||| ||||| ||||| |||||||||||||||| |||| Sbjct: 19182367 taccatttggacctatgcagaaatgtctttggtgaaggtgtttatcctgatgtgttcatg 19182426 Query: 399 acaaacttatactatggaggcacaagaattgc 430 |||||||| || || ||||||||||||||||| Sbjct: 19182427 acaaacttgtattacggaggcacaagaattgc 19182458 Score = 79.8 bits (40), Expect = 7e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcaccaaaaaatgatagc 311 ||||||| |||||||||||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 19181945 tggtggttccaagtttgcagtgaggttgcctattttcaagtggcacccaaaaacgatagc 19182004 Query: 312 gtccgctctacaaagatcgataca 335 | ||||||||| ||||| ||||| Sbjct: 19182005 attcgctctacagagatcaataca 19182028 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 183 gcatcagttgcatcatatgatcagaagtatttgaagaacacaactcca 230 ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 19172271 gcatcagttgcatcatatgatcaagaatatttgaagaacacaactcca 19172318 Score = 46.1 bits (23), Expect = 0.095 Identities = 47/55 (85%) Strand = Plus / Plus Query: 8 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcg 62 ||||| |||||||||||||||||| | ||||| || || || |||||||||||| Sbjct: 19171803 gttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcg 19171857
>gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 genomic sequence, complete sequence Length = 113606 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 62 gttccaatatggcaatcctgatgttttgtgctccccactagttgaagcaaagaagaatgg 121 ||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 113231 gttccaatacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatgg 113290 Query: 122 tacggatttggtgg 135 || |||||||||| Sbjct: 113291 cacagatttggtgg 113304 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 183 gcatcagttgcatcatatgatcagaagtatttgaagaacac 223 ||||||||||||||||||||||| | |||||||||||||| Sbjct: 113566 gcatcagttgcatcatatgatcaagaatatttgaagaacac 113606 Score = 46.1 bits (23), Expect = 0.095 Identities = 47/55 (85%) Strand = Plus / Plus Query: 8 gttagaaaatgatggtgacttcctttacctactagcagacgctgcagctattgcg 62 ||||| |||||||||||||||||| | ||||| || || || |||||||||||| Sbjct: 113098 gttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcg 113152
>ref|NM_001036718.1| Arabidopsis thaliana catalytic/ serine-type peptidase AT4G36195 transcript variant AT4G36195.2 mRNA, complete cds Length = 1663 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1101 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1147
>ref|NM_119787.2| Arabidopsis thaliana catalytic/ serine-type peptidase AT4G36195 transcript variant AT4G36195.1 mRNA, complete cds Length = 1700 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1101 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1147
>gb|AY133877.1| Arabidopsis thaliana clone U09999 unknown protein (At4g36195) mRNA, complete cds Length = 1498 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1012 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1058
>gb|AY034960.1| Arabidopsis thaliana unknown protein (At4g36195) mRNA, complete cds Length = 1713 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1101 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1147
>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85 Length = 198750 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 10236 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 10282
>emb|AL022141.1|ATF23E13 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E13 (ESSAII project) Length = 94695 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 33515 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 33561
>emb|BX827415.1|CNS0A2UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1630 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1041 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1087
>emb|BX829098.1|CNS0A2LR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1580 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1036 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1082
>emb|BX827322.1|CNS0A2RU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS39ZG03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1592 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1038 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1084
>dbj|AK176387.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL24-09-P10 Length = 1665 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1057 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1103
>dbj|AK176292.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL23-23-H16 Length = 1654 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1048 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1094
>dbj|AK176216.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL23-09-N18 Length = 1627 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1048 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1094
>dbj|AK176095.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL22-87-D20 Length = 1656 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1068 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1114
>dbj|AK176051.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL22-79-J12 Length = 1656 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1068 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1114
>dbj|AK176014.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL22-71-M08 Length = 1656 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1068 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1114
>dbj|AK175200.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, partial cds, clone: RAFL21-61-O17 Length = 1544 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 935 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 981
>dbj|AK175158.1| Arabidopsis thaliana mRNA for prolyl carboxypeptidase like protein, complete cds, clone: RAFL21-57-M09 Length = 1618 Score = 46.1 bits (23), Expect = 0.095 Identities = 41/47 (87%) Strand = Plus / Plus Query: 252 tggtggtatcaagtttgcagtgaggtttcatatttccaagtggcacc 298 ||||||| |||||||||| ||| || ||||||||||||||||||| Sbjct: 1048 tggtggttccaagtttgcactgaagtggcatatttccaagtggcacc 1094
>ref|NM_127364.1| Arabidopsis thaliana serine-type peptidase AT2G18080 mRNA, complete cds Length = 1101 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 gttgaagcaaagaagaatggta 123 |||||||||||||||||||||| Sbjct: 490 gttgaagcaaagaagaatggta 511
>gb|DQ446516.1| Arabidopsis thaliana clone pENTR221-At2g18080 serine carboxypeptidase S28 family protein (At2g18080) mRNA, complete cds Length = 1254 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 gttgaagcaaagaagaatggta 123 |||||||||||||||||||||| Sbjct: 646 gttgaagcaaagaagaatggta 667
>gb|AC006201.4| Arabidopsis thaliana chromosome 2 clone T27K22 map c245, complete sequence Length = 88149 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 gttgaagcaaagaagaatggta 123 |||||||||||||||||||||| Sbjct: 17229 gttgaagcaaagaagaatggta 17208
>gb|AF526789.1| HIV-1 isolate E2587C1 from Senegal envelope glycoprotein (env) gene, partial cds Length = 339 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 gaagtatttgaagaacacaac 226 ||||||||||||||||||||| Sbjct: 297 gaagtatttgaagaacacaac 317
>ref|NM_112394.2| Arabidopsis thaliana unknown protein AT3G15310 mRNA, complete cds Length = 1544 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tagttgaagcaaagaagaat 119 |||||||||||||||||||| Sbjct: 40 tagttgaagcaaagaagaat 21
>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217496 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 caatcctgatgttttgtgct 93 |||||||||||||||||||| Sbjct: 156266 caatcctgatgttttgtgct 156247
>gb|AC140724.4| Mus musculus chromosome 8, clone RP24-291N1, complete sequence Length = 159182 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 aggtttcatatttccaagtg 293 |||||||||||||||||||| Sbjct: 73361 aggtttcatatttccaagtg 73342
>gb|AC161229.10| Mus musculus chromosome 7, clone RP24-88J19, complete sequence Length = 189105 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 tatgatcagaagtatttgaa 217 |||||||||||||||||||| Sbjct: 107966 tatgatcagaagtatttgaa 107947
>gb|AC183987.3| Pan troglodytes BAC clone CH251-265I5 from chromosome 6, complete sequence Length = 162913 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ttgcatcatatgatcagaagtatt 213 |||||| ||||||||||||||||| Sbjct: 102539 ttgcataatatgatcagaagtatt 102562
>gb|AC134323.3| Mus musculus BAC clone RP24-512P7 from chromosome 8, complete sequence Length = 176667 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 aggtttcatatttccaagtg 293 |||||||||||||||||||| Sbjct: 157133 aggtttcatatttccaagtg 157152
>gb|AC132473.3| Mus musculus BAC clone RP23-114F11 from chromosome 8, complete sequence Length = 162027 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 atcctgatgttttgtgctcc 95 |||||||||||||||||||| Sbjct: 85438 atcctgatgttttgtgctcc 85457
>ref|XM_660281.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80241) partial mRNA Length = 1506 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 tgcatcatatgatcagaagtattt 214 ||||||||||||| |||||||||| Sbjct: 282 tgcatcatatgatgagaagtattt 259
>emb|AL390237.9| Human DNA sequence from clone RP11-278J20 on chromosome 6 Contains a retinoblastoma binding protein 4 (RBBP4) pseudogene and a KIAA0797 pseudogene, complete sequence Length = 140120 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 ttgcatcatatgatcagaagtatt 213 |||||| ||||||||||||||||| Sbjct: 55447 ttgcataatatgatcagaagtatt 55424
>gb|AY050876.1| Arabidopsis thaliana unknown protein (At3g15310) mRNA, complete cds Length = 1545 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tagttgaagcaaagaagaat 119 |||||||||||||||||||| Sbjct: 40 tagttgaagcaaagaagaat 21
>emb|CR457462.13| Zebrafish DNA sequence from clone CH211-1O7 in linkage group 13, complete sequence Length = 166823 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 agacttgtgcaaaaatgttt 366 |||||||||||||||||||| Sbjct: 58414 agacttgtgcaaaaatgttt 58433
>gb|AC008114.25| Homo sapiens 12 BAC RP11-502N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 126503 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 agacttgtgcaaaaatgttt 366 |||||||||||||||||||| Sbjct: 47695 agacttgtgcaaaaatgttt 47714
>emb|BX927364.4| Zebrafish DNA sequence from clone CH211-20H7 in linkage group 14, complete sequence Length = 94162 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 aaaatgatggtgacttcctttacc 36 |||| ||||||||||||||||||| Sbjct: 13433 aaaaagatggtgacttcctttacc 13456
>ref|XM_627109.1| Cryptosporidium parvum Iowa II RRP5 like protein involved in rRNA biogenesis (cgd8_2050), partial mRNA Length = 6009 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 tgcatcatatgatcagaagtattt 214 ||||||||||||| |||||||||| Sbjct: 1494 tgcatcatatgatgagaagtattt 1471
>gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217586 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 caatcctgatgttttgtgct 93 |||||||||||||||||||| Sbjct: 146963 caatcctgatgttttgtgct 146982
>emb|BX548012.11| Zebrafish DNA sequence from clone DKEY-271O4 in linkage group 18, complete sequence Length = 154557 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 agaagtatttgaagaacaca 224 |||||||||||||||||||| Sbjct: 94044 agaagtatttgaagaacaca 94025
>emb|BX825615.1|CNS0A4XP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL49ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tagttgaagcaaagaagaat 119 |||||||||||||||||||| Sbjct: 26 tagttgaagcaaagaagaat 7
>ref|XM_215497.3| PREDICTED: Rattus norvegicus RAD1 homolog (S. pombe) (predicted) (Rad1_predicted), mRNA Length = 972 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cggatttggtggaagcattt 143 |||||||||||||||||||| Sbjct: 749 cggatttggtggaagcattt 768
>gb|AF296826.1|F15I15 Arabidopsis thaliana BAC F15I15 Length = 93896 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tagttgaagcaaagaagaat 119 |||||||||||||||||||| Sbjct: 29491 tagttgaagcaaagaagaat 29472
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 40.1 bits (20), Expect = 5.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 199 atgatcagaa-gtatttgaagaacacaa 225 |||||||||| ||||||||||||||||| Sbjct: 3929 atgatcagaacgtatttgaagaacacaa 3956
>dbj|AP000413.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K7L4 Length = 65047 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tagttgaagcaaagaagaat 119 |||||||||||||||||||| Sbjct: 33094 tagttgaagcaaagaagaat 33113
>dbj|AB046435.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F15I15 Length = 93896 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tagttgaagcaaagaagaat 119 |||||||||||||||||||| Sbjct: 29491 tagttgaagcaaagaagaat 29472
>dbj|AB012248.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI22 Length = 80115 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 ctgaatcttcatatagattgtggt 255 ||||||||||||||||||| |||| Sbjct: 15592 ctgaatcttcatatagattttggt 15569
>gb|AC154480.2| Mus musculus BAC clone RP24-135M1 from 13, complete sequence Length = 171846 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 catatttccaagtggcacca 299 |||||||||||||||||||| Sbjct: 53492 catatttccaagtggcacca 53473
>dbj|AP000651.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-88K4, complete sequences Length = 74994 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 197 atatgatcagaagtatttgaagaacaca 224 |||||||||||| |||||||| |||||| Sbjct: 27649 atatgatcagaaatatttgaataacaca 27622
>emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in linkage group 8, complete sequence Length = 181168 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 catttagacttgtgcaaaaa 361 |||||||||||||||||||| Sbjct: 129372 catttagacttgtgcaaaaa 129353
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 caagtggcaccaaaaaatga 307 |||||||||||||||||||| Sbjct: 2410975 caagtggcaccaaaaaatga 2410956
>emb|AJ311054.1|CPA311054 Chironomus pallidivittatus 4L ORF for putative recombinase subtelocentric clone, Cp5.5 Length = 5463 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aaaatgttagaaaatgatgg 22 |||||||||||||||||||| Sbjct: 4393 aaaatgttagaaaatgatgg 4412 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,380,557 Number of Sequences: 3902068 Number of extensions: 4380557 Number of successful extensions: 83755 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 83554 Number of HSP's gapped (non-prelim): 202 length of query: 434 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 412 effective length of database: 17,147,199,772 effective search space: 7064646306064 effective search space used: 7064646306064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)