ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet11b03 |
|---|---|
| Clone Library Name | barley_pub |
>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Protein Xantha-l) Length = 417 Score = 167 bits (422), Expect = 1e-41 Identities = 86/121 (71%), Positives = 87/121 (71%) Frame = +3 Query: 51 MASAMELSLLNPAMHHYGIAAKTASHLPVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 230 MASAMELSLLNPAMHHYGIAAKTASHLPVVP Sbjct: 1 MASAMELSLLNPAMHHYGIAAKTASHLPVVPARRASSGAVRFRVRAAAAAPPAPAAKPGS 60 Query: 231 XXXXXKTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFI 410 KTEVNESLLTPRFYTTDFDEMEQLFNAEIN+QLNQDEFDALLQEFKTDYNQTHFI Sbjct: 61 PKKRGKTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFI 120 Query: 411 R 413 R Sbjct: 121 R 121
>CRD1_EUPES (Q945B7) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 102 bits (254), Expect = 3e-22 Identities = 46/56 (82%), Positives = 52/56 (92%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K E+NE+LLTPRFYTTDFDEME LFN EIN++LNQ EF+ALLQEFKTDYNQTHF+R Sbjct: 54 KKEINETLLTPRFYTTDFDEMETLFNTEINKKLNQSEFEALLQEFKTDYNQTHFVR 109
>CRD1_ARATH (Q9M591) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Copper response defect 1 protein) (Dicarboxylate diiron protein) (AtZIP Length = 409 Score = 99.8 bits (247), Expect = 2e-21 Identities = 45/56 (80%), Positives = 51/56 (91%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K E+ ESLLTPRFYTTDF+EMEQLFN EIN+ LN+ EF+ALLQEFKTDYNQTHF+R Sbjct: 58 KKEIQESLLTPRFYTTDFEEMEQLFNTEINKNLNEAEFEALLQEFKTDYNQTHFVR 113
>CRD1_GOSHI (Q6SJV8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 98.6 bits (244), Expect = 5e-21 Identities = 44/56 (78%), Positives = 50/56 (89%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 KT + E+LLTPRFYTTDFDEME LFN EIN+ LNQ EF++LLQEFKTDYNQTHF+R Sbjct: 54 KTAIKETLLTPRFYTTDFDEMEALFNTEINKNLNQSEFESLLQEFKTDYNQTHFVR 109
>CTH1_CHLRE (Q9AR22) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) (Copper target homolog 1 protein) Length = 407 Score = 82.8 bits (203), Expect = 3e-16 Identities = 35/56 (62%), Positives = 47/56 (83%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K +E+LLTPRFYTTDFDEME+LF+ E+N+ ++ +EF+A+L EFK DYNQ HF+R Sbjct: 56 KVASDETLLTPRFYTTDFDEMERLFSLELNKNMDMEEFEAMLNEFKLDYNQRHFVR 111
>CRD1_CHLRE (Q9LD46) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) (Copper response defect 1 protein) (Copper-response target 1 protein Length = 407 Score = 79.7 bits (195), Expect = 2e-15 Identities = 35/56 (62%), Positives = 43/56 (76%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K E+LLTPRFYTTDFDEMEQLF+ EIN L+ +E +A L EF+ DYN+ HF+R Sbjct: 56 KVAAKETLLTPRFYTTDFDEMEQLFSKEINPNLDMEELNACLNEFRNDYNKVHFVR 111
>ACSF_GRATL (Q6B8U1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 70.1 bits (170), Expect = 2e-12 Identities = 35/56 (62%), Positives = 42/56 (75%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 +T V E+LLTPRFYTTDFDEM +L + N DEF+ALLQEF+ DYN+ HFIR Sbjct: 9 QTPVKETLLTPRFYTTDFDEMSKL-----DISSNIDEFEALLQEFRADYNRQHFIR 59
>ACSF3_ANASP (Q8YRZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 3 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 3) Length = 358 Score = 65.9 bits (159), Expect = 4e-11 Identities = 31/56 (55%), Positives = 41/56 (73%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K E+LLTPRFYTTDFDEM A ++ +N+DE A+L+EF+TDYN+ HF+R Sbjct: 18 KVPAKETLLTPRFYTTDFDEM-----ARMDISVNEDELLAILEEFRTDYNRHHFVR 68
>ACSF1_SYNY3 (P72584) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 358 Score = 64.7 bits (156), Expect = 8e-11 Identities = 30/56 (53%), Positives = 41/56 (73%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 KT E++LTPRFYTTDFDEM A+++ N+DE A+L+EF+ DYN+ HF+R Sbjct: 18 KTPAKETILTPRFYTTDFDEM-----AKMDISPNEDELRAILEEFRVDYNRHHFVR 68
>ACSF_PORPU (P51277) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 60.8 bits (146), Expect = 1e-09 Identities = 29/51 (56%), Positives = 37/51 (72%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 E+LLTPRFYTTDF+EM A +N N+ +F A+L+EF+ DYN HFIR Sbjct: 14 ETLLTPRFYTTDFEEM-----ASMNISENEQDFFAILEEFRADYNSQHFIR 59
>ACSF_CYAME (Q85FX6) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 335 Score = 59.7 bits (143), Expect = 3e-09 Identities = 28/51 (54%), Positives = 38/51 (74%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 ++LLTPRFYTTDFD+M A+ + N+ E +A++ EF+ DYNQTHFIR Sbjct: 12 QTLLTPRFYTTDFDQM-----AKYDISKNRAEIEAIVNEFRKDYNQTHFIR 57
>ACSF_SYNP6 (Q5MZZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 59.3 bits (142), Expect = 3e-09 Identities = 27/56 (48%), Positives = 39/56 (69%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K E++LTPRFYTTDF+ M A+++ N+DE A+L+EF+ DYN+ HF+R Sbjct: 18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFRADYNRKHFVR 68
>ACSF1_SYNEL (Q8DJ05) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 380 Score = 57.8 bits (138), Expect = 1e-08 Identities = 28/56 (50%), Positives = 39/56 (69%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K E++LTPRFYTTDF+ M N +I E N+ E +A+L+EF+ DYN+ HF+R Sbjct: 18 KAPAKETILTPRFYTTDFEAMA---NMDITE--NKAELEAILEEFRCDYNRHHFVR 68
>ACSF_SYNPX (Q7U6Y8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 356 Score = 57.4 bits (137), Expect = 1e-08 Identities = 26/56 (46%), Positives = 40/56 (71%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K V +++LTPRFYTTDFD+M A ++ + N+ E +A+ +EF+ DYN+ HF+R Sbjct: 16 KDPVKDTILTPRFYTTDFDDM-----AAMDLRPNEAELEAICEEFRKDYNRHHFVR 66
>ACSF_PROMP (Q7V1M1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 390 Score = 56.6 bits (135), Expect = 2e-08 Identities = 24/56 (42%), Positives = 39/56 (69%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K +++LTP FYTTDF+ ME++ + +N+DE +A+ +EF+ DYN+ HF+R Sbjct: 18 KDIAKDTILTPNFYTTDFEAMEKM-----DLSINEDELEAICEEFRKDYNRHHFVR 68
>ACSF_CYACA (Q9TLR8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 354 Score = 56.2 bits (134), Expect = 3e-08 Identities = 26/56 (46%), Positives = 38/56 (67%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K + E+LL PRFYTTDFDE+ + + N +E +A++ EF++DYN+ HFIR Sbjct: 11 KKTIKETLLAPRFYTTDFDEI-----SRYDISSNFEEIEAIVNEFRSDYNKKHFIR 61
>ACSF2_SYNY3 (P74134) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 56.2 bits (134), Expect = 3e-08 Identities = 27/56 (48%), Positives = 37/56 (66%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K V E+LLTPRFYTTDFD++ A + L +E +A L+E + DYN+ HF+R Sbjct: 18 KAPVKETLLTPRFYTTDFDKV-----ANLVLTLQDEEIEAALEELRADYNRYHFVR 68
>ACSF2_ANASP (Q8YVU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 55.8 bits (133), Expect = 4e-08 Identities = 26/56 (46%), Positives = 37/56 (66%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 K V E+LLTPRFYTTDFD + A ++ N+ E A+++E + DYN+ HF+R Sbjct: 18 KAPVQETLLTPRFYTTDFDAV-----ANLDISANETEIRAIVEELRADYNRHHFVR 68
>ACSF_GLOVI (Q7NFA1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 346 Score = 53.5 bits (127), Expect = 2e-07 Identities = 26/56 (46%), Positives = 39/56 (69%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 ++E E+LLTPRFYTTDF+ + A+++ + +F+ALL EF+ DYN+ HF R Sbjct: 13 QSERRETLLTPRFYTTDFEAL-----AKLDISAMEADFEALLAEFQADYNREHFQR 63
>ACSF2_SYNEL (Q8DI68) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 354 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/53 (43%), Positives = 37/53 (69%) Frame = +3 Query: 255 VNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 + E+LLTPRFYTTDF++ A+++ Q++ +A+L E + DYN+ HF+R Sbjct: 17 IRENLLTPRFYTTDFEQA-----AKLDLSRQQEQLEAMLAEMRADYNRHHFVR 64
>ACSF1_ANASP (Q8YX57) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 351 Score = 51.6 bits (122), Expect = 7e-07 Identities = 26/56 (46%), Positives = 37/56 (66%) Frame = +3 Query: 246 KTEVNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 KT E++LTPRFYTTDF E N +++ Q ++E A+L E + DYN+ HF+R Sbjct: 11 KTPSKETVLTPRFYTTDF---ETAANLDLSAQ--ENELQAMLAEMRADYNRHHFVR 61
>ACSF_PROMA (Q7VBV0) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 347 Score = 46.6 bits (109), Expect = 2e-05 Identities = 21/53 (39%), Positives = 37/53 (69%) Frame = +3 Query: 255 VNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 ++E+LLTPRFYTT+F++ A+ + ++ + +F+A+ +E + DYN HF R Sbjct: 21 LDENLLTPRFYTTEFEKA-----AKTDLEIARKDFEAMFKEMEADYNLKHFDR 68
>ACSF_PROMM (Q7V3Y9) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 46.2 bits (108), Expect = 3e-05 Identities = 21/53 (39%), Positives = 36/53 (67%) Frame = +3 Query: 255 VNESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 ++++LLTPRFYTT+FD+ A+ + + + +F+A+ +E + DYN HF R Sbjct: 23 LDDNLLTPRFYTTEFDKA-----AKTDLDIARKDFEAMFKEMEADYNLKHFDR 70
>ACSF_RHOPA (Q6N9J7) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 365 Score = 45.1 bits (105), Expect = 7e-05 Identities = 20/49 (40%), Positives = 34/49 (69%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHF 407 +++LTPRFYTTD+ M++L + L + E+ A++ E + DYN++HF Sbjct: 31 DTILTPRFYTTDYAAMDKL-----DVSLVRAEWTAMMNELRADYNKSHF 74
>ACSF_RHOGE (Q8VPB5) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 40.0 bits (92), Expect = 0.002 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = +3 Query: 264 SLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDALLQEFKTDYNQTHFIR 413 +LL+PRFYTTD+ M + + I + E+DA+L E++ D N HF R Sbjct: 21 TLLSPRFYTTDYAAMNAIDVSSI-----RAEWDAMLAEYEGDNNHDHFQR 65
>JJAZ_MOUSE (Q80U70) Polycomb protein Suz12 (Suppressor of zeste 12 protein| homolog) Length = 741 Score = 31.2 bits (69), Expect = 0.99 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -2 Query: 182 HAEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEEGELHGG 57 H G G GP+ G GG FGG A V G+ GG Sbjct: 6 HGGGGGGGSGPSAGSG---GGGFGGSAAAVAAAASGGKSGGG 44
>SUZ12_HUMAN (Q15022) Polycomb protein SUZ12 (Suppressor of zeste 12 protein| homolog) (Joined to JAZF1 protein) (Chromatin precipitated E2F target 9 protein) (ChET 9 protein) Length = 739 Score = 30.4 bits (67), Expect = 1.7 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -2 Query: 182 HAEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEEGELHGG 57 H G G GP+ G GG FGG A V G+ GG Sbjct: 6 HGGGGGGGSGPSAGSG---GGGFGGSAAVAAATASGGKSGGG 44
>FGD4_HUMAN (Q96M96) FYVE, RhoGEF and PH domain-containing protein 4 (Actin| filament-binding protein frabin) (FGD1-related F-actin-binding protein) (Zinc finger FYVE domain-containing protein 6) Length = 766 Score = 30.4 bits (67), Expect = 1.7 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +3 Query: 258 NESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDA 365 NE LLT R Y D ++Q+F ++ E+ N+ F A Sbjct: 212 NELLLTERAYVNRLDLLDQVFYCKLLEEANRGSFPA 247
>UB2Q1_MOUSE (Q7TSS2) Ubiquitin-conjugating enzyme E2 Q1 (EC 6.3.2.19)| (Ubiquitin-protein ligase Q1) (Ubiquitin carrier protein Q1) Length = 422 Score = 30.0 bits (66), Expect = 2.2 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -2 Query: 179 AEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEE 75 A A GAG G A G + G GD V +HC + E Sbjct: 76 AGAGGAGAGAAPGPHLPSRGSVPGDPVRIHCNITE 110
>UB2Q1_HUMAN (Q7Z7E8) Ubiquitin-conjugating enzyme E2 Q1 (EC 6.3.2.19)| (Ubiquitin-protein ligase Q1) (Ubiquitin carrier protein Q1) (Protein NICE-5) Length = 422 Score = 30.0 bits (66), Expect = 2.2 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -2 Query: 179 AEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEE 75 A A GAG G A G + G GD V +HC + E Sbjct: 76 AGAGGAGAGAAPGPHLPPRGSVPGDPVRIHCNITE 110
>PRC_HAEIN (P45306) Tail-specific protease precursor (EC 3.4.21.102) (Protease| Re) (C-terminal-processing peptidase) Length = 695 Score = 29.3 bits (64), Expect = 3.7 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +3 Query: 282 FYTTDFDEMEQLFNAEINEQLNQDEFDA 365 F +D DE+ Q + +++EQLNQ + A Sbjct: 92 FLQSDIDELRQKYGTKLDEQLNQGDLSA 119
>FGD4_MOUSE (Q91ZT5) FYVE, RhoGEF and PH domain-containing protein 4 (Actin| filement-binding protein frabin) (FGD1-related F-actin-binding protein) Length = 766 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +3 Query: 261 ESLLTPRFYTTDFDEMEQLFNAEINEQLNQDEFDA 365 E LLT R Y + D ++Q+F ++ E+ N+ F A Sbjct: 213 ELLLTERAYVSRLDLLDQVFYCKLLEEANRGSFPA 247
>CSMD1_MOUSE (Q923L3) CUB and sushi domain-containing protein 1 precursor (CUB and| sushi multiple domains protein 1) Length = 3564 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 2/82 (2%) Frame = -3 Query: 280 RGVSRDSLTSVLPRFFGEPGFXXXXXXXXXXALTRKRTAPEEARRAGT--TGRWEAVLAA 107 RGV + + LP F G+PG P E R +G T + E + Sbjct: 3140 RGVWKGEVPQCLPVFCGDPG------------------TPAEGRLSGKSFTFKSEVFIQC 3181 Query: 106 MP*WCIAGLRRESSMADAIFRG 41 P + + G R + AD I+ G Sbjct: 3182 KPPFVLVGSSRRTCQADGIWSG 3203
>GRP1_PETHY (P09789) Glycine-rich cell wall structural protein 1 precursor| Length = 384 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -2 Query: 161 GRGPACGDNREVGGRFGGDA 102 GRGP+ G R GG FGG A Sbjct: 56 GRGPSFGRGRGAGGGFGGGA 75
>FANCJ_CHICK (Q3YK19) Fanconi anemia group J protein homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase BRIP1) (Protein FACJ) Length = 1252 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Frame = +2 Query: 5 SSLPFRAVCHSRSSED----GVRHGA 70 +SLP R VCHSRS G HGA Sbjct: 86 ASLPCRCVCHSRSESSEATAGASHGA 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,623,834 Number of Sequences: 219361 Number of extensions: 549852 Number of successful extensions: 2369 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 2225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2347 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
