ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet11a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
114KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor 46 2e-05
2PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 46 2e-05
3CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... 42 5e-04
4HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... 40 0.001
5XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1... 28 4.0
6GIGAN_ORYSA (Q9AWL7) GIGANTEA protein 28 5.2
7SYI_GLUOX (Q5FRI6) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 28 6.8

>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor|
          Length = 137

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 25/51 (49%), Positives = 28/51 (54%)
 Frame = +1

Query: 250 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALK 402
           D LKLG CA+                   CCSLL GL +LEAAVCLCTA+K
Sbjct: 57  DALKLGVCADVLNLVHNVVIGSPPTL--PCCSLLEGLVNLEAAVCLCTAIK 105



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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 22/51 (43%), Positives = 27/51 (52%)
 Frame = +1

Query: 250 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALK 402
           D LKLGAC +                   CC LLGGL DL+AA+CLCT ++
Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAKQT--CCPLLGGLVDLDAAICLCTTIR 312



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>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific|
           protein ZRP3)
          Length = 129

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 22/51 (43%), Positives = 27/51 (52%)
 Frame = +1

Query: 250 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALK 402
           D LKL  CA                  ++CC LL GL DL+AA+CLCTA+K
Sbjct: 51  DALKLKVCAKVLGLVKVGLPQY-----EQCCPLLEGLVDLDAALCLCTAIK 96



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>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)|
          Length = 80

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 331 DKCCSLLGGLADLEAAVCLCTALK 402
           D CC+L+GGL D+EA VCLC  L+
Sbjct: 26  DDCCALIGGLGDIEAIVCLCIQLR 49



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>XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1.8) (Xylanase|
           B) (1,4-beta-D-xylan xylanohydrolase B)
          Length = 592

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 25  TTSASQLKQPGAMASRTFSAACLLALLVANTFLAGDAC 138
           T SAS  + PG    RT +  C+   L A  F A  AC
Sbjct: 2   TISASDYRHPGNFLKRTTALLCVGTALTALAFNASAAC 39



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>GIGAN_ORYSA (Q9AWL7) GIGANTEA protein|
          Length = 1160

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 149 WQLLQASPARNVLATSSASRQAAEKVLDAI 60
           WQ L ASP   + A S+++ Q   KV+DA+
Sbjct: 908 WQKLIASPEMQMSAESTSAHQGWRKVVDAL 937



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>SYI_GLUOX (Q5FRI6) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 960

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 110 ATSSASRQAAEKVLDAIAPGCLSWLALVVV 21
           A S  +R+AA  VLDA+     +WLA V+V
Sbjct: 783 APSDPTRRAARTVLDALHRALCTWLAPVLV 812


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,805,417
Number of Sequences: 219361
Number of extensions: 238253
Number of successful extensions: 902
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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