| Clone Name | baet119g04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ310847.1|HVU310847 Hordeum vulgare partial CA8 gene for P-type ATPase Length = 1800 Score = 916 bits (462), Expect = 0.0 Identities = 468/470 (99%) Strand = Plus / Plus Query: 1 tcaagtcttcccattcaattcagagaaaaagcgaggcggggttgctgtgcaagtgggtga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 tcaagtcttcccattcaattcagagaaaaagcgaggcggggttgctgtgcaagtgggtga 326 Query: 61 ctctgaggttcatgtatactggaaaggagctgctgaacttattttggaatcatgcactag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 ctctgaggttcatgtatactggaaaggagctgctgaacttattttggaatcatgcactag 386 Query: 121 ttgggttgacatggatggttcaaatcactcaatgactcctgagaaagctgctgagttcaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 ttgggttgacatggatggttcaaatcactcaatgactcctgagaaagctgctgagttcaa 446 Query: 181 gaaattcattgaggacatggctgttgctagccttcgctgtgtcgcctttgcatacagacc 240 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 447 gaaattcattgaggacatggctgttgctaatcttcgctgtgtcgcctttgcatacagacc 506 Query: 241 ttgtgagatgagtgatgttccgaaggaggaccagagggctgactgggtattacccgaaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 ttgtgagatgagtgatgttccgaaggaggaccagagggctgactgggtattacccgaaga 566 Query: 301 taacctgattatgcttggtattgtgggaataaaggatccctgccgcccaggagttcaaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 taacctgattatgcttggtattgtgggaataaaggatccctgccgcccaggagttcaaga 626 Query: 361 ttctatccgcttgtgtacggcagctggcattaaggtccgcatggtcactggggataatct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 ttctatccgcttgtgtacggcagctggcattaaggtccgcatggtcactggggataatct 686 Query: 421 tcaaactgccagagcaattgccttggaatgtggtattcttactgatccta 470 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 tcaaactgccagagcaattgccttggaatgtggtattcttactgatccta 736
>ref|XM_473800.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3267 Score = 224 bits (113), Expect = 2e-55 Identities = 367/452 (81%), Gaps = 6/452 (1%) Strand = Plus / Plus Query: 8 ttcccattcaattcagagaaaaagcgaggcggggttgctgtgcaagtgggtgactctgag 67 ||||||||||| ||||||||||| ||||||||||||| ||||| |||||| ||||||| Sbjct: 1741 ttcccattcaactcagagaaaaaaagaggcggggttgcagtgcatctgggtggctctgag 1800 Query: 68 ------gttcatgtatactggaaaggagctgctgaacttattttggaatcatgcactagt 121 || || || ||||||| |||||||| ||| |||||||||| ||||||| || Sbjct: 1801 tctgaggtacacatacactggaagggagctgcagaaattattttggattcatgcaaaagc 1860 Query: 122 tgggttgacatggatggttcaaatcactcaatgactcctgagaaagctgctgagttcaag 181 ||| ||| ||||||||||| || |||||||| ||||||||| | ||| |||||| Sbjct: 1861 tggcttgctgcagatggttcaaagcattcaatgacacctgagaaaattagtgaattcaag 1920 Query: 182 aaattcattgaggacatggctgttgctagccttcgctgtgtcgcctttgcatacagacct 241 |||||||| || || ||||||| | | ||||| || ||||| |||||||| || ||| | Sbjct: 1921 aaattcatagaagatatggctgcttcgagcctccggtgtgttgcctttgcttatagaaca 1980 Query: 242 tgtgagatgagtgatgttccgaaggaggaccagagggctgactgggtattacccgaagat 301 | ||||||| |||||| || | ||||||| ||||||||| ||| |||| || |||||| Sbjct: 1981 tatgagatggttgatgtcccaagtgaggaccggagggctgattggatattgcctgaagat 2040 Query: 302 aacctgattatgcttggtattgtgggaataaaggatccctgccgcccaggagttcaagat 361 || ||||||||||||| || || || ||||||||||| |||||||| || ||| ||||| Sbjct: 2041 gacttgattatgcttggcatagttgggataaaggatccttgccgcccgggtgttaaagat 2100 Query: 362 tctatccgcttgtgtacggcagctggcattaaggtccgcatggtcactggggataatctt 421 ||| | || || ||| | |||||||||||||||||||||||||| ||||| || || ||| Sbjct: 2101 tctgttcggttatgtgcagcagctggcattaaggtccgcatggttactggagacaacctt 2160 Query: 422 caaactgccagagcaattgccttggaatgtgg 453 |||||||||||||| ||||||||||| ||||| Sbjct: 2161 caaactgccagagccattgccttggagtgtgg 2192
>dbj|AK120495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120H18, full insert sequence Length = 3659 Score = 224 bits (113), Expect = 2e-55 Identities = 367/452 (81%), Gaps = 6/452 (1%) Strand = Plus / Plus Query: 8 ttcccattcaattcagagaaaaagcgaggcggggttgctgtgcaagtgggtgactctgag 67 ||||||||||| ||||||||||| ||||||||||||| ||||| |||||| ||||||| Sbjct: 1888 ttcccattcaactcagagaaaaaaagaggcggggttgcagtgcatctgggtggctctgag 1947 Query: 68 ------gttcatgtatactggaaaggagctgctgaacttattttggaatcatgcactagt 121 || || || ||||||| |||||||| ||| |||||||||| ||||||| || Sbjct: 1948 tctgaggtacacatacactggaagggagctgcagaaattattttggattcatgcaaaagc 2007 Query: 122 tgggttgacatggatggttcaaatcactcaatgactcctgagaaagctgctgagttcaag 181 ||| ||| ||||||||||| || |||||||| ||||||||| | ||| |||||| Sbjct: 2008 tggcttgctgcagatggttcaaagcattcaatgacacctgagaaaattagtgaattcaag 2067 Query: 182 aaattcattgaggacatggctgttgctagccttcgctgtgtcgcctttgcatacagacct 241 |||||||| || || ||||||| | | ||||| || ||||| |||||||| || ||| | Sbjct: 2068 aaattcatagaagatatggctgcttcgagcctccggtgtgttgcctttgcttatagaaca 2127 Query: 242 tgtgagatgagtgatgttccgaaggaggaccagagggctgactgggtattacccgaagat 301 | ||||||| |||||| || | ||||||| ||||||||| ||| |||| || |||||| Sbjct: 2128 tatgagatggttgatgtcccaagtgaggaccggagggctgattggatattgcctgaagat 2187 Query: 302 aacctgattatgcttggtattgtgggaataaaggatccctgccgcccaggagttcaagat 361 || ||||||||||||| || || || ||||||||||| |||||||| || ||| ||||| Sbjct: 2188 gacttgattatgcttggcatagttgggataaaggatccttgccgcccgggtgttaaagat 2247 Query: 362 tctatccgcttgtgtacggcagctggcattaaggtccgcatggtcactggggataatctt 421 ||| | || || ||| | |||||||||||||||||||||||||| ||||| || || ||| Sbjct: 2248 tctgttcggttatgtgcagcagctggcattaaggtccgcatggttactggagacaacctt 2307 Query: 422 caaactgccagagcaattgccttggaatgtgg 453 |||||||||||||| ||||||||||| ||||| Sbjct: 2308 caaactgccagagccattgccttggagtgtgg 2339
>dbj|AK067259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095I07, full insert sequence Length = 3596 Score = 224 bits (113), Expect = 2e-55 Identities = 367/452 (81%), Gaps = 6/452 (1%) Strand = Plus / Plus Query: 8 ttcccattcaattcagagaaaaagcgaggcggggttgctgtgcaagtgggtgactctgag 67 ||||||||||| ||||||||||| ||||||||||||| ||||| |||||| ||||||| Sbjct: 1928 ttcccattcaactcagagaaaaaaagaggcggggttgcagtgcatctgggtggctctgag 1987 Query: 68 ------gttcatgtatactggaaaggagctgctgaacttattttggaatcatgcactagt 121 || || || ||||||| |||||||| ||| |||||||||| ||||||| || Sbjct: 1988 tctgaggtacacatacactggaagggagctgcagaaattattttggattcatgcaaaagc 2047 Query: 122 tgggttgacatggatggttcaaatcactcaatgactcctgagaaagctgctgagttcaag 181 ||| ||| ||||||||||| || |||||||| ||||||||| | ||| |||||| Sbjct: 2048 tggcttgctgcagatggttcaaagcattcaatgacacctgagaaaattagtgaattcaag 2107 Query: 182 aaattcattgaggacatggctgttgctagccttcgctgtgtcgcctttgcatacagacct 241 |||||||| || || ||||||| | | ||||| || ||||| |||||||| || ||| | Sbjct: 2108 aaattcatagaagatatggctgcttcgagcctccggtgtgttgcctttgcttatagaaca 2167 Query: 242 tgtgagatgagtgatgttccgaaggaggaccagagggctgactgggtattacccgaagat 301 | ||||||| |||||| || | ||||||| ||||||||| ||| |||| || |||||| Sbjct: 2168 tatgagatggttgatgtcccaagtgaggaccggagggctgattggatattgcctgaagat 2227 Query: 302 aacctgattatgcttggtattgtgggaataaaggatccctgccgcccaggagttcaagat 361 || ||||||||||||| || || || ||||||||||| |||||||| || ||| ||||| Sbjct: 2228 gacttgattatgcttggcatagttgggataaaggatccttgccgcccgggtgttaaagat 2287 Query: 362 tctatccgcttgtgtacggcagctggcattaaggtccgcatggtcactggggataatctt 421 ||| | || || ||| | |||||||||||||||||||||||||| ||||| || || ||| Sbjct: 2288 tctgttcggttatgtgcagcagctggcattaaggtccgcatggttactggagacaacctt 2347 Query: 422 caaactgccagagcaattgccttggaatgtgg 453 |||||||||||||| ||||||||||| ||||| Sbjct: 2348 caaactgccagagccattgccttggagtgtgg 2379
>dbj|AK120057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P10, full insert sequence Length = 1981 Score = 206 bits (104), Expect = 5e-50 Identities = 308/376 (81%) Strand = Plus / Plus Query: 78 actggaaaggagctgctgaacttattttggaatcatgcactagttgggttgacatggatg 137 ||||||| |||||||| ||| |||||||||| ||||||| || ||| ||| |||| Sbjct: 208 actggaagggagctgcagaaattattttggattcatgcaaaagctggcttgctgcagatg 267 Query: 138 gttcaaatcactcaatgactcctgagaaagctgctgagttcaagaaattcattgaggaca 197 ||||||| || |||||||| ||||||||| | ||| |||||||||||||| || || | Sbjct: 268 gttcaaagcattcaatgacacctgagaaaattagtgaattcaagaaattcatagaagata 327 Query: 198 tggctgttgctagccttcgctgtgtcgcctttgcatacagaccttgtgagatgagtgatg 257 |||||| | | ||||| || ||||| |||||||| || ||| | | ||||||| ||||| Sbjct: 328 tggctgcttcgagcctccggtgtgttgcctttgcttatagaacatatgagatggttgatg 387 Query: 258 ttccgaaggaggaccagagggctgactgggtattacccgaagataacctgattatgcttg 317 | || | ||||||| ||||||||| ||| |||| || |||||| || |||||||||||| Sbjct: 388 tcccaagtgaggaccggagggctgattggatattgcctgaagatgacttgattatgcttg 447 Query: 318 gtattgtgggaataaaggatccctgccgcccaggagttcaagattctatccgcttgtgta 377 | || || || ||||||||||| |||||||| || ||| |||||||| | || || ||| Sbjct: 448 gcatagttgggataaaggatccttgccgcccgggtgttaaagattctgttcggttatgtg 507 Query: 378 cggcagctggcattaaggtccgcatggtcactggggataatcttcaaactgccagagcaa 437 | |||||||||||||||||||||||||| ||||| || || ||||||||||||||||| | Sbjct: 508 cagcagctggcattaaggtccgcatggttactggagacaaccttcaaactgccagagcca 567 Query: 438 ttgccttggaatgtgg 453 |||||||||| ||||| Sbjct: 568 ttgccttggagtgtgg 583
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 393 aggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaatgtg 452 ||||||||||||| ||||| || || ||||||||||||||||| ||||||||||| |||| Sbjct: 85812 aggtccgcatggttactggagacaaccttcaaactgccagagccattgccttggagtgtg 85753 Query: 453 g 453 | Sbjct: 85752 g 85752 Score = 71.9 bits (36), Expect = 2e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 176 ttcaagaaattcattgaggacatggctgttgctagccttcgctgtgtcgcctttgcatac 235 |||||||||||||| || || ||||||| | | ||||| || ||||| |||||||| || Sbjct: 86986 ttcaagaaattcatagaagatatggctgcttcgagcctccggtgtgttgcctttgcttat 86927 Query: 236 agaccttgtgagatgagtgatgttccgaaggaggaccagagggctgactgggtattaccc 295 ||| | | ||||||| |||||| || | ||||||| ||||||||| ||| |||| || Sbjct: 86926 agaacatatgagatggttgatgtcccaagtgaggaccggagggctgattggatattgcct 86867 Query: 296 gaagataacctgattatgcttggtattgtgggaataaagg 335 |||||| || ||||||||||||| || || || ||||||| Sbjct: 86866 gaagatgacttgattatgcttggcatagttgggataaagg 86827 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 8 ttcccattcaattcagagaaaaagcgaggcggggttgctgtgca 51 ||||||||||| ||||||||||| ||||||||||||| ||||| Sbjct: 87677 ttcccattcaactcagagaaaaaaagaggcggggttgcagtgca 87634 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 78 actggaaaggagctgctgaacttattttggaatcatgcactagttgggttgacatggatg 137 ||||||| |||||||| ||| |||||||||| ||||||| || ||| ||| |||| Sbjct: 87160 actggaagggagctgcagaaattattttggattcatgcaaaagctggcttgctgcagatg 87101 Query: 138 gttcaaatcactcaatgactcctgagaaag 167 ||||||| || |||||||| |||||||||| Sbjct: 87100 gttcaaagcattcaatgacacctgagaaag 87071 Score = 48.1 bits (24), Expect = 0.026 Identities = 54/64 (84%) Strand = Plus / Minus Query: 333 aggatccctgccgcccaggagttcaagattctatccgcttgtgtacggcagctggcatta 392 ||||||| |||||||| || ||| |||||||| | || || ||| | ||||||||||||| Sbjct: 86040 aggatccttgccgcccgggtgttaaagattctgttcggttatgtgcagcagctggcatta 85981 Query: 393 aggt 396 |||| Sbjct: 85980 aggt 85977
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 393 aggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaatgtg 452 ||||||||||||| ||||| || || ||||||||||||||||| ||||||||||| |||| Sbjct: 13835 aggtccgcatggttactggagacaaccttcaaactgccagagccattgccttggagtgtg 13776 Query: 453 g 453 | Sbjct: 13775 g 13775 Score = 71.9 bits (36), Expect = 2e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 176 ttcaagaaattcattgaggacatggctgttgctagccttcgctgtgtcgcctttgcatac 235 |||||||||||||| || || ||||||| | | ||||| || ||||| |||||||| || Sbjct: 15009 ttcaagaaattcatagaagatatggctgcttcgagcctccggtgtgttgcctttgcttat 14950 Query: 236 agaccttgtgagatgagtgatgttccgaaggaggaccagagggctgactgggtattaccc 295 ||| | | ||||||| |||||| || | ||||||| ||||||||| ||| |||| || Sbjct: 14949 agaacatatgagatggttgatgtcccaagtgaggaccggagggctgattggatattgcct 14890 Query: 296 gaagataacctgattatgcttggtattgtgggaataaagg 335 |||||| || ||||||||||||| || || || ||||||| Sbjct: 14889 gaagatgacttgattatgcttggcatagttgggataaagg 14850 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 8 ttcccattcaattcagagaaaaagcgaggcggggttgctgtgca 51 ||||||||||| ||||||||||| ||||||||||||| ||||| Sbjct: 15700 ttcccattcaactcagagaaaaaaagaggcggggttgcagtgca 15657 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 78 actggaaaggagctgctgaacttattttggaatcatgcactagttgggttgacatggatg 137 ||||||| |||||||| ||| |||||||||| ||||||| || ||| ||| |||| Sbjct: 15183 actggaagggagctgcagaaattattttggattcatgcaaaagctggcttgctgcagatg 15124 Query: 138 gttcaaatcactcaatgactcctgagaaag 167 ||||||| || |||||||| |||||||||| Sbjct: 15123 gttcaaagcattcaatgacacctgagaaag 15094 Score = 48.1 bits (24), Expect = 0.026 Identities = 54/64 (84%) Strand = Plus / Minus Query: 333 aggatccctgccgcccaggagttcaagattctatccgcttgtgtacggcagctggcatta 392 ||||||| |||||||| || ||| |||||||| | || || ||| | ||||||||||||| Sbjct: 14063 aggatccttgccgcccgggtgttaaagattctgttcggttatgtgcagcagctggcatta 14004 Query: 393 aggt 396 |||| Sbjct: 14003 aggt 14000
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 393 aggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaatgtg 452 ||||||||||||| ||||| || || ||||||||||||||||| ||||||||||| |||| Sbjct: 30610104 aggtccgcatggttactggagacaaccttcaaactgccagagccattgccttggagtgtg 30610045 Query: 453 g 453 | Sbjct: 30610044 g 30610044 Score = 71.9 bits (36), Expect = 2e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 176 ttcaagaaattcattgaggacatggctgttgctagccttcgctgtgtcgcctttgcatac 235 |||||||||||||| || || ||||||| | | ||||| || ||||| |||||||| || Sbjct: 30611278 ttcaagaaattcatagaagatatggctgcttcgagcctccggtgtgttgcctttgcttat 30611219 Query: 236 agaccttgtgagatgagtgatgttccgaaggaggaccagagggctgactgggtattaccc 295 ||| | | ||||||| |||||| || | ||||||| ||||||||| ||| |||| || Sbjct: 30611218 agaacatatgagatggttgatgtcccaagtgaggaccggagggctgattggatattgcct 30611159 Query: 296 gaagataacctgattatgcttggtattgtgggaataaagg 335 |||||| || ||||||||||||| || || || ||||||| Sbjct: 30611158 gaagatgacttgattatgcttggcatagttgggataaagg 30611119 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 8 ttcccattcaattcagagaaaaagcgaggcggggttgctgtgca 51 ||||||||||| ||||||||||| ||||||||||||| ||||| Sbjct: 30611969 ttcccattcaactcagagaaaaaaagaggcggggttgcagtgca 30611926 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 78 actggaaaggagctgctgaacttattttggaatcatgcactagttgggttgacatggatg 137 ||||||| |||||||| ||| |||||||||| ||||||| || ||| ||| |||| Sbjct: 30611452 actggaagggagctgcagaaattattttggattcatgcaaaagctggcttgctgcagatg 30611393 Query: 138 gttcaaatcactcaatgactcctgagaaag 167 ||||||| || |||||||| |||||||||| Sbjct: 30611392 gttcaaagcattcaatgacacctgagaaag 30611363 Score = 48.1 bits (24), Expect = 0.026 Identities = 54/64 (84%) Strand = Plus / Minus Query: 333 aggatccctgccgcccaggagttcaagattctatccgcttgtgtacggcagctggcatta 392 ||||||| |||||||| || ||| |||||||| | || || ||| | ||||||||||||| Sbjct: 30610332 aggatccttgccgcccgggtgttaaagattctgttcggttatgtgcagcagctggcatta 30610273 Query: 393 aggt 396 |||| Sbjct: 30610272 aggt 30610269
>ref|XM_483341.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3291 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 290 ttacccgaagataacctgattatgcttggtattgtgggaataaaggatccctgccgccca 349 ||||| || ||| |||||| | ||||| |||||||||| ||||||||||| || |||||| Sbjct: 2062 ttacctgaggatgacctgactctgctttgtattgtgggtataaaggatccttgtcgccca 2121 Query: 350 ggagt 354 ||||| Sbjct: 2122 ggagt 2126
>dbj|AK121509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023K22, full insert sequence Length = 5133 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 290 ttacccgaagataacctgattatgcttggtattgtgggaataaaggatccctgccgccca 349 ||||| || ||| |||||| | ||||| |||||||||| ||||||||||| || |||||| Sbjct: 2277 ttacctgaggatgacctgactctgctttgtattgtgggtataaaggatccttgtcgccca 2336 Query: 350 ggagt 354 ||||| Sbjct: 2337 ggagt 2341
>dbj|AK107078.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-F06, full insert sequence Length = 2432 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 290 ttacccgaagataacctgattatgcttggtattgtgggaataaaggatccctgccgccca 349 ||||| || ||| |||||| | ||||| |||||||||| ||||||||||| || |||||| Sbjct: 327 ttacctgaggatgacctgactctgctttgtattgtgggtataaaggatccttgtcgccca 386 Query: 350 ggagt 354 ||||| Sbjct: 387 ggagt 391
>ref|NM_113013.3| Arabidopsis thaliana ACA9; calcium-transporting ATPase/ calmodulin binding AT3G21180 (ACA9) mRNA, complete cds Length = 3769 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 7 cttcccattcaattcagagaaaaagcgaggcggggttgctgtgc 50 |||||| |||||||||||||||||||| || || |||||||||| Sbjct: 2018 cttccctttcaattcagagaaaaagcgtggtggtgttgctgtgc 2061 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 390 ttaaggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaat 449 ||||||| || ||||| ||||| || ||||||||||| || | ||||||||| ||||| | Sbjct: 2401 ttaaggtacgaatggtgactggtgacaatcttcaaacagcaaaagcaattgctttggagt 2460 Query: 450 gtggtat 456 ||||||| Sbjct: 2461 gtggtat 2467
>dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXL8 Length = 85599 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 7 cttcccattcaattcagagaaaaagcgaggcggggttgctgtgc 50 |||||| |||||||||||||||||||| || || |||||||||| Sbjct: 10932 cttccctttcaattcagagaaaaagcgtggtggtgttgctgtgc 10975 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 401 atggtcactggggataatcttcaaactgccagagcaattgccttggaatgtggtat 456 ||||| ||||| || ||||||||||| || | ||||||||| ||||| |||||||| Sbjct: 11861 atggtgactggtgacaatcttcaaacagcaaaagcaattgctttggagtgtggtat 11916
>gb|AY084872.1| Arabidopsis thaliana clone 119936 mRNA, complete sequence Length = 1642 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 390 ttaaggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaat 449 ||||||| || ||||| ||||| || ||||||||||| || | ||||||||| ||||| | Sbjct: 274 ttaaggtacgaatggtgactggtgacaatcttcaaacagcaaaagcaattgctttggagt 333 Query: 450 gtggtat 456 ||||||| Sbjct: 334 gtggtat 340
>ref|NM_180869.1| Arabidopsis thaliana ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding AT5G57110 (ACA8) transcript variant AT5G57110.1 mRNA, complete cds Length = 3603 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 392 aaggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaatgt 451 |||||||| ||||| ||||| || || | ||||||||||| || ||||||||||||||| Sbjct: 2222 aaggtccgtatggttactggtgacaacgtccaaactgccagggctattgccttggaatgt 2281 Query: 452 gg 453 || Sbjct: 2282 gg 2283
>ref|NM_125093.3| Arabidopsis thaliana ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calmodulin binding AT5G57110 (ACA8) transcript variant AT5G57110.2 mRNA, complete cds Length = 3619 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 392 aaggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaatgt 451 |||||||| ||||| ||||| || || | ||||||||||| || ||||||||||||||| Sbjct: 2238 aaggtccgtatggttactggtgacaacgtccaaactgccagggctattgccttggaatgt 2297 Query: 452 gg 453 || Sbjct: 2298 gg 2299
>emb|AJ249352.1|ATH249352 Arabidopsis thaliana mRNA for plasma membrane Ca2+-ATPase (aca8 gene) Length = 3525 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 392 aaggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaatgt 451 |||||||| ||||| ||||| || || | ||||||||||| || ||||||||||||||| Sbjct: 2224 aaggtccgtatggttactggtgacaacgtccaaactgccagggctattgccttggaatgt 2283 Query: 452 gg 453 || Sbjct: 2284 gg 2285
>gb|AY069869.1| Arabidopsis thaliana AT5g57110/MUL3_5 mRNA, complete cds Length = 3575 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 392 aaggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaatgt 451 |||||||| ||||| ||||| || || | ||||||||||| || ||||||||||||||| Sbjct: 2224 aaggtccgtatggttactggtgacaacgtccaaactgccagggctattgccttggaatgt 2283 Query: 452 gg 453 || Sbjct: 2284 gg 2285
>emb|AJ311785.1|CNO311785 Cymodocea nodosa CCA5 gene for P-type ATPase Length = 1012 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 392 aaggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaatgt 451 ||||| |||||||| ||||| || |||||||| ||||||| ||| || || ||||||||| Sbjct: 655 aaggtacgcatggtaactggagacaatcttcagactgccaaagccatagctttggaatgt 714 Query: 452 gg 453 || Sbjct: 715 gg 716 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 ttcccattcaattcagagaaaaa 30 ||||||||||||||||||||||| Sbjct: 274 ttcccattcaattcagagaaaaa 296
>dbj|AB023042.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUL3 Length = 82010 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 393 aggtccgcatggtcactggggataatcttcaaactgccagagcaattgccttggaatgtg 452 ||||||| ||||| ||||| || || | ||||||||||| || |||||||||||||||| Sbjct: 18233 aggtccgtatggttactggtgacaacgtccaaactgccagggctattgccttggaatgtg 18174 Query: 453 g 453 | Sbjct: 18173 g 18173
>gb|BC077905.1| Xenopus laevis ATPase, Ca++ transporting, plasma membrane 3, mRNA (cDNA clone MGC:80772 IMAGE:5512793), complete cds Length = 4684 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 383 gctggcattaaggtccgcatggtcactggggataa 417 |||||||| | |||||||||||| ||||||||||| Sbjct: 2594 gctggcatcacggtccgcatggtgactggggataa 2628
>emb|CR932143.1|CNS0KYFS Paramecium tetraurelia macronuclear, plasma membrane calcium ATPase, putative, complete gene Length = 3817 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 cttcccattcaattcagagaaaaag 31 ||||||||||||||| ||||||||| Sbjct: 1796 cttcccattcaattctgagaaaaag 1820
>gb|AC004966.2| Homo sapiens PAC clone RP5-1107K15 from 7, complete sequence Length = 134084 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 333 aggatccctgccgcccaggagttcaagat 361 ||||||||| | ||||||||||||||||| Sbjct: 53043 aggatcccttcagcccaggagttcaagat 53015
>gb|AC099652.2| Homo sapiens BAC clone RP11-750J7 from 7, complete sequence Length = 152754 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 ctgtgcaagtgggtgactctg 65 ||||||||||||||||||||| Sbjct: 30118 ctgtgcaagtgggtgactctg 30098
>gb|AC092355.2| Homo sapiens chromosome 7 clone RP11-310D24, complete sequence Length = 91792 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaagat 361 ||||||||| | ||||||||||||||||| Sbjct: 42899 aggatcccttcagcccaggagttcaagat 42927
>gb|AY228336.1| Homo sapiens Kell blood group (KEL) gene, complete cds Length = 25850 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 ctgtgcaagtgggtgactctg 65 ||||||||||||||||||||| Sbjct: 4608 ctgtgcaagtgggtgactctg 4628
>dbj|AP006140.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT37A01, TM0244, complete sequence Length = 102724 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 5 gtcttcccattcaattcagagaaaaagcgaggcggggttgc 45 ||||| |||||||||||||| ||||| ||||| || ||||| Sbjct: 101122 gtctttccattcaattcagacaaaaaacgaggtggagttgc 101162
>ref|NM_121526.3| Arabidopsis thaliana structural constituent of ribosome AT5G15220 mRNA, complete cds Length = 795 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 gctgctgagttcaagaaattcatt 190 ||||||||||| |||||||||||| Sbjct: 131 gctgctgagtttaagaaattcatt 108
>gb|AC151486.1| Pan troglodytes chromosome X clone PTB-029D14 map human ortholog q28, complete sequence Length = 154019 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 35584 aggatccctggagcccaggagttcaaga 35611
>gb|AY679523.1| Homo sapiens cell division cycle 2-like 5 (cholinesterase-related cell division controller) (CDC2L5) gene, complete cds Length = 148952 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 35580 aggatccctggagcccaggagttcaaga 35607
>gb|AC120788.7| Mus musculus chromosome 14, clone RP23-279B13, complete sequence Length = 215810 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 atacagaccttgtgagatga 251 |||||||||||||||||||| Sbjct: 199580 atacagaccttgtgagatga 199561
>gb|AC137558.3| Mus musculus BAC clone RP23-16I17 from chromosome 6, complete sequence Length = 225612 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tgctgaacttattttggaat 110 |||||||||||||||||||| Sbjct: 7814 tgctgaacttattttggaat 7833
>gb|AF235103.5| Homo sapiens chromosome 8 multiple clones map q24.3, complete sequence Length = 345524 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 332 aaggatccctgccgcccaggagttcaag 359 |||||||||| | ||||||||||||||| Sbjct: 285683 aaggatcccttcagcccaggagttcaag 285710
>gb|AC072061.8| Homo sapiens BAC clone RP11-467D6 from 7, complete sequence Length = 167852 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 117774 aggatccctggagcccaggagttcaaga 117801
>gb|AC004008.2| Homo sapiens PAC clone RP5-899B21 from 7, complete sequence Length = 90389 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 20523 aggatccctggagcccaggagttcaaga 20550
>gb|AC126773.3| Homo sapiens chromosome 16 clone RP11-615I2, complete sequence Length = 196911 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 108239 aggatccctggagcccaggagttcaaga 108266
>gb|U52111.3| Homo sapiens chromosome X clone Qc-7G6, QLL-F1720, QLL-C1335, Qc-8B7, Qc-11H12, Qc-7F6, QLL-E153, Qc-10E8, Qc-10B7 map q28, complete sequence Length = 247592 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 131673 aggatccctggagcccaggagttcaaga 131700
>gb|AC006044.2| Homo sapiens BAC clone RP11-539B24 from 7, complete sequence Length = 141509 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||| ||| ||||||||||||||||| Sbjct: 101615 aggatcactgacgcccaggagttcaaga 101642
>emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082 Length = 340000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ggaaaggagctgctgaactt 100 |||||||||||||||||||| Sbjct: 151674 ggaaaggagctgctgaactt 151693
>emb|AL358013.19| Human DNA sequence from clone RP11-420G9 on chromosome 1 Contains the 5' end of the KIF1B gene for kinesin family member 1B and a CpG island, complete sequence Length = 171612 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 55989 aggatcccttcagcccaggagttcaaga 55962
>emb|AL353718.10| Human DNA sequence from clone RP11-472F14 on chromosome 9 Cotains the 3' end of the gene for ubiquitin-like, containing PHD and RING finger domains 2 (URF2), a novel gene (PROO365), the 3' end of the GLDC gene for glycine dehydrogenase (decarboxylating; glycine decarboxylase, glycine cleavage system protein P) and a pseudogene similar to part of RP42 homolog, complete sequence Length = 146746 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 35231 aggatcccttcagcccaggagttcaaga 35204
>gb|AC138908.3| Homo sapiens chromosome 5 clone RP11-615D2, complete sequence Length = 201419 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 88955 aggatcccttcagcccaggagttcaaga 88982
>gb|AC139103.3| Homo sapiens chromosome 8, clone, complete sequence Length = 166920 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 332 aaggatccctgccgcccaggagttcaag 359 |||||||||| | ||||||||||||||| Sbjct: 69203 aaggatcccttcagcccaggagttcaag 69176
>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project) Length = 103996 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 gctgctgagttcaagaaattcatt 190 ||||||||||| |||||||||||| Sbjct: 46023 gctgctgagtttaagaaattcatt 46046
>gb|AC105449.8| Homo sapiens chromosome 8, clone RP11-152B5, complete sequence Length = 159789 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 332 aaggatccctgccgcccaggagttcaag 359 |||||||||| | ||||||||||||||| Sbjct: 20218 aaggatcccttcagcccaggagttcaag 20191
>gb|AC087815.6| Homo sapiens chromosome 8, clone RP5-1109M23, complete sequence Length = 77745 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 332 aaggatccctgccgcccaggagttcaag 359 |||||||||| | ||||||||||||||| Sbjct: 17911 aaggatcccttcagcccaggagttcaag 17938
>gb|AC022046.11| Homo sapiens chromosome , clone RP11-13L22, complete sequence Length = 169553 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 111316 aggatcccttcagcccaggagttcaaga 111343
>emb|BX927261.8| Zebrafish DNA sequence from clone DKEY-17O15 in linkage group 5, complete sequence Length = 227322 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 agttcaagaaattcattgag 193 |||||||||||||||||||| Sbjct: 33822 agttcaagaaattcattgag 33803
>gb|AC148346.12| Medicago truncatula clone mth2-25m19, complete sequence Length = 122590 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttattttggaatcatgcact 118 |||||||||||||||||||| Sbjct: 34826 ttattttggaatcatgcact 34807
>gb|AC084734.4| Homo sapiens chromosome 8, clone RP11-317J10, complete sequence Length = 181044 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 176269 aggatccctggagcccaggagttcaaga 176296
>gb|AC108700.4| Homo sapiens 3 BAC RP11-14B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155455 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 73108 aggatcccttcagcccaggagttcaaga 73135
>gb|AC105225.5| Homo sapiens chromosome 8, clone RP11-775E18, complete sequence Length = 135609 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 69588 aggatccctggagcccaggagttcaaga 69615
>gb|AC008862.5| Homo sapiens chromosome 5 clone CTD-2187G18, complete sequence Length = 92650 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 76326 aggatccctggagcccaggagttcaaga 76353
>gb|AC073651.23| Homo sapiens 12 BAC RP11-6B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165565 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 131512 aggatccctggagcccaggagttcaaga 131485
>gb|AC084264.7| Homo sapiens chromosome 2, clone CTB-2122H5, complete sequence Length = 146957 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 332 aaggatccctgccgcccaggagttcaag 359 ||||||||||| ||||||||||||||| Sbjct: 13634 aaggatccctgaagcccaggagttcaag 13607
>gb|AC092435.5| Homo sapiens BAC clone RP11-292D4 from 4, complete sequence Length = 122583 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 aattcattgaggacatggct 202 |||||||||||||||||||| Sbjct: 19854 aattcattgaggacatggct 19835
>gb|AC025800.10| Homo sapiens chromosome 8, clone RP11-600N23, complete sequence Length = 185359 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 47474 aggatccctggagcccaggagttcaaga 47501
>gb|AC008851.7| Homo sapiens chromosome 5 clone CTD-2173D20, complete sequence Length = 130416 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 69598 aggatcccttcagcccaggagttcaaga 69625
>gb|AC151733.5| Mus musculus BAC clone RP23-89N20 from chromosome 7, complete sequence Length = 204775 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 tgaggacatggctgttgcta 209 |||||||||||||||||||| Sbjct: 193843 tgaggacatggctgttgcta 193862
>gb|AY048281.1| Arabidopsis thaliana AT5g15220/F8M21_110 mRNA, complete cds Length = 701 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 gctgctgagttcaagaaattcatt 190 ||||||||||| |||||||||||| Sbjct: 131 gctgctgagtttaagaaattcatt 108
>gb|AC156290.10| Mus musculus 6 BAC RP24-267I24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 144883 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tgctgaacttattttggaat 110 |||||||||||||||||||| Sbjct: 3028 tgctgaacttattttggaat 3009
>emb|BX897689.5| Zebrafish DNA sequence from clone DKEY-40N8, complete sequence Length = 216629 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 agttcaagaaattcattgag 193 |||||||||||||||||||| Sbjct: 47813 agttcaagaaattcattgag 47794
>gb|AC015599.5|AC015599 Homo sapiens chromosome , clone RP11-45B19, complete sequence Length = 162607 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 49497 aggatccctggagcccaggagttcaaga 49524
>emb|BX833043.1|CNS0A20U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 679 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 gctgctgagttcaagaaattcatt 190 ||||||||||| |||||||||||| Sbjct: 101 gctgctgagtttaagaaattcatt 78
>emb|BX833009.1|CNS0A1ZU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL29ZG02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 686 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 gctgctgagttcaagaaattcatt 190 ||||||||||| |||||||||||| Sbjct: 113 gctgctgagtttaagaaattcatt 90
>emb|BX833626.1|CNS0A0H8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 778 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 gctgctgagttcaagaaattcatt 190 ||||||||||| |||||||||||| Sbjct: 114 gctgctgagtttaagaaattcatt 91
>gb|AC011242.8| Homo sapiens BAC clone RP11-489K22 from 2, complete sequence Length = 186091 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 332 aaggatccctgccgcccaggagttcaag 359 ||||||||||| ||||||||||||||| Sbjct: 95789 aaggatccctgaagcccaggagttcaag 95762
>gb|AC013429.12|AC013429 Homo sapiens chromosome 7 clone RP11-199L18, complete sequence Length = 179623 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 84795 aggatcccttcagcccaggagttcaaga 84822
>gb|AC008265.15|AC008265 Homo sapiens chromosome 7 clone RP11-256C24, complete sequence Length = 170537 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 161813 aggatcccttcagcccaggagttcaaga 161786
>gb|AC138832.2| Homo sapiens chromosome 5 clone RP11-1174L13, complete sequence Length = 225384 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 118006 aggatcccttcagcccaggagttcaaga 117979
>gb|AC138948.2| Homo sapiens chromosome 5 clone RP11-800G17, complete sequence Length = 172404 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 81735 aggatcccttcagcccaggagttcaaga 81762
>gb|AC138817.2| Homo sapiens chromosome 5 clone RP11-1099E10, complete sequence Length = 185785 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 ||||||||| | |||||||||||||||| Sbjct: 64282 aggatcccttcagcccaggagttcaaga 64309
>gb|AC156630.6| Mus musculus BAC clone RP24-556B7 from chromosome 7, complete sequence Length = 205753 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 tgaggacatggctgttgcta 209 |||||||||||||||||||| Sbjct: 36967 tgaggacatggctgttgcta 36986
>gb|U88060.1|IVU88060 Inkoo virus isolate SWAR83-161 M segment polyprotein gene, complete cds Length = 4506 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 ctgctgaacttattttggaatcat 113 |||||||||||||||| ||||||| Sbjct: 4457 ctgctgaacttattttagaatcat 4480
>dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-178H8, complete sequence Length = 193227 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 333 aggatccctgccgcccaggagttcaaga 360 |||||||||| |||||||||||||||| Sbjct: 189375 aggatccctggagcccaggagttcaaga 189402
>dbj|AP005976.2| Homo sapiens genomic DNA, chromosome 8qtel, clone: KB1585H8, complete sequence Length = 226221 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 332 aaggatccctgccgcccaggagttcaag 359 |||||||||| | ||||||||||||||| Sbjct: 134755 aaggatcccttcagcccaggagttcaag 134782
>gb|AC154237.1| Mus musculus BAC clone RP24-162O18 from 17, complete sequence Length = 168481 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ggcagctggcattaaggtcc 398 |||||||||||||||||||| Sbjct: 35821 ggcagctggcattaaggtcc 35802
>gb|AF042091.1|AF042091 Homo sapiens chromosome 21q22.3 PAC 267O10, complete sequence Length = 121019 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ggaaaggagctgctgaactt 100 |||||||||||||||||||| Sbjct: 105220 ggaaaggagctgctgaactt 105239 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,429,132 Number of Sequences: 3902068 Number of extensions: 4429132 Number of successful extensions: 157646 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 157268 Number of HSP's gapped (non-prelim): 378 length of query: 476 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 454 effective length of database: 17,147,199,772 effective search space: 7784828696488 effective search space used: 7784828696488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)