>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02,
              complete sequence
          Length = 146541

 Score =  295 bits (149), Expect = 2e-77
 Identities = 149/149 (100%)
 Strand = Plus / Plus

                                                                          
Query: 1      tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112035 tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 112094

                                                                          
Query: 61     taatctcgctgtaatccaagttgagacttgaagaattaatgtgtatgctgtaagtcaaat 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112095 taatctcgctgtaatccaagttgagacttgaagaattaatgtgtatgctgtaagtcaaat 112154

                                           
Query: 121    gatatgcgatctgtgcgctgcttactagt 149
              |||||||||||||||||||||||||||||
Sbjct: 112155 gatatgcgatctgtgcgctgcttactagt 112183

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  295 bits (149), Expect = 2e-77
 Identities = 149/149 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14031958 tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 14032017

                                                                            
Query: 61       taatctcgctgtaatccaagttgagacttgaagaattaatgtgtatgctgtaagtcaaat 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14032018 taatctcgctgtaatccaagttgagacttgaagaattaatgtgtatgctgtaagtcaaat 14032077

                                             
Query: 121      gatatgcgatctgtgcgctgcttactagt 149
                |||||||||||||||||||||||||||||
Sbjct: 14032078 gatatgcgatctgtgcgctgcttactagt 14032106

>dbj|AK068459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151C17, full
            insert sequence
          Length = 3464

 Score =  295 bits (149), Expect = 2e-77
 Identities = 149/149 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1592 tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 1651

                                                                        
Query: 61   taatctcgctgtaatccaagttgagacttgaagaattaatgtgtatgctgtaagtcaaat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1652 taatctcgctgtaatccaagttgagacttgaagaattaatgtgtatgctgtaagtcaaat 1711

                                         
Query: 121  gatatgcgatctgtgcgctgcttactagt 149
            |||||||||||||||||||||||||||||
Sbjct: 1712 gatatgcgatctgtgcgctgcttactagt 1740

>dbj|AK059697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C04, full
            insert sequence
          Length = 1565

 Score =  295 bits (149), Expect = 2e-77
 Identities = 149/149 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1393 tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 1452

                                                                        
Query: 61   taatctcgctgtaatccaagttgagacttgaagaattaatgtgtatgctgtaagtcaaat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1453 taatctcgctgtaatccaagttgagacttgaagaattaatgtgtatgctgtaagtcaaat 1512

                                         
Query: 121  gatatgcgatctgtgcgctgcttactagt 149
            |||||||||||||||||||||||||||||
Sbjct: 1513 gatatgcgatctgtgcgctgcttactagt 1541

>gb|AY017989.1| Oryza sativa microsatellite MRG0314 containing (AG)X19, closest to
           marker Y2820R, genomic sequence
          Length = 238

 Score =  212 bits (107), Expect = 2e-52
 Identities = 107/107 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 48

                                                          
Query: 61  taatctcgctgtaatccaagttgagacttgaagaattaatgtgtatg 107
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  taatctcgctgtaatccaagttgagacttgaagaattaatgtgtatg 1

>gb|AY022144.1| Oryza sativa microsatellite MRG4469 containing (TC)X19, closest to
           marker Y2820R, genomic sequence
          Length = 238

 Score =  210 bits (106), Expect = 9e-52
 Identities = 106/106 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 192

                                                         
Query: 61  taatctcgctgtaatccaagttgagacttgaagaattaatgtgtat 106
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 taatctcgctgtaatccaagttgagacttgaagaattaatgtgtat 238

>gb|AY916493.1| Oryza sativa (japonica cultivar-group) cathepsin B-like cysteine
            protease mRNA, complete cds
          Length = 1475

 Score =  125 bits (63), Expect = 4e-26
 Identities = 63/63 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 tctctctacgtccggttaactacgggatgtgacgtagaggtgttagggaggagcgcacgt 1472

               
Query: 61   taa 63
            |||
Sbjct: 1473 taa 1475

>emb|BX927297.12| Zebrafish DNA sequence from clone DKEY-238M4 in linkage group 16,
             complete sequence
          Length = 132039

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 92    agaattaatgtgtatgctgtaa 113
             ||||||||||||||||||||||
Sbjct: 75996 agaattaatgtgtatgctgtaa 76017

>gb|AC107401.5| Homo sapiens BAC clone RP11-813N20 from 4, complete sequence
          Length = 104079

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    ttgagacttgaagaattaat 100
             ||||||||||||||||||||
Sbjct: 56769 ttgagacttgaagaattaat 56750

>gb|AC182428.2| Pan troglodytes BAC clone CH251-637G21 from chromosome 4, complete
             sequence
          Length = 210098

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    ttgagacttgaagaattaat 100
             ||||||||||||||||||||
Sbjct: 17277 ttgagacttgaagaattaat 17258

>gb|AC111000.3| Homo sapiens BAC clone RP13-644M16 from 4, complete sequence
          Length = 156578

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    ttgagacttgaagaattaat 100
             ||||||||||||||||||||
Sbjct: 19326 ttgagacttgaagaattaat 19307

>gb|AC084661.1|CBRG46O12 Caenorhabditis briggsae cosmid G46O12, complete sequence
          Length = 43197

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    ccaagttgagacttgaagaa 95
             ||||||||||||||||||||
Sbjct: 27582 ccaagttgagacttgaagaa 27601

>dbj|AK116268.1| Ciona intestinalis cDNA, clone:citb028l21, full insert sequence
          Length = 1536

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 tgtgtatgctgtaagtcaaa 119
           ||||||||||||||||||||
Sbjct: 78  tgtgtatgctgtaagtcaaa 97

>ref|XM_450214.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1053

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 34  gtagaggtgttagggagga 52
           |||||||||||||||||||
Sbjct: 343 gtagaggtgttagggagga 361

>gb|AC153010.3| Mus musculus BAC clone RP23-325H1 from chromosome 15, complete sequence
          Length = 230097

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 104    tatgctgtaagtcaaatga 122
              |||||||||||||||||||
Sbjct: 211088 tatgctgtaagtcaaatga 211070

>gb|AC142474.4| Mus musculus BAC clone RP24-362N7 from chromosome 15, complete sequence
          Length = 172879

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 104   tatgctgtaagtcaaatga 122
             |||||||||||||||||||
Sbjct: 80420 tatgctgtaagtcaaatga 80402

>emb|AL139239.18| Human DNA sequence from clone RP11-19C6 on chromosome 10 Contains the 5'
              end of the CRTAC1 gene for cartilage acidic protein 1 and
              two CpG islands, complete sequence
          Length = 161235

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 88     ttgaagaattaatgtgtat 106
              |||||||||||||||||||
Sbjct: 151389 ttgaagaattaatgtgtat 151371

>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence
          Length = 198687

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 78     aagttgagacttgaagaat 96
              |||||||||||||||||||
Sbjct: 146211 aagttgagacttgaagaat 146193

>gb|AC146706.8| Medicago truncatula clone mth2-108g5, complete sequence
          Length = 106753

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 81    ttgagacttgaagaattaatgtg 103
             |||||||||||| ||||||||||
Sbjct: 65338 ttgagacttgaataattaatgtg 65316

>gb|AC010157.12| Homo sapiens chromosome 10 clone RP11-202D18, complete sequence
          Length = 160310

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 84     agacttgaagaattaatgt 102
              |||||||||||||||||||
Sbjct: 148210 agacttgaagaattaatgt 148192

>gb|AC092392.2| Homo sapiens chromosome 1 clone RP4-544H6, complete sequence
          Length = 98286

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    tagaggtgttagggaggag 53
             |||||||||||||||||||
Sbjct: 55686 tagaggtgttagggaggag 55704

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 34      gtagaggtgttagggagga 52
               |||||||||||||||||||
Sbjct: 3172297 gtagaggtgttagggagga 3172315

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 47      ggaggagcgcacgttaatc 65
               |||||||||||||||||||
Sbjct: 5805647 ggaggagcgcacgttaatc 5805665

>gb|AC079602.15| Homo sapiens 12 BAC RP11-216P16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172008

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   gctgtaagtcaaatgatat 125
             |||||||||||||||||||
Sbjct: 28858 gctgtaagtcaaatgatat 28840

>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0701E03
          Length = 183245

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     ggaggagcgcacgttaatc 65
              |||||||||||||||||||
Sbjct: 121176 ggaggagcgcacgttaatc 121194

>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0537F07
          Length = 147724

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 47   ggaggagcgcacgttaatc 65
            |||||||||||||||||||
Sbjct: 6422 ggaggagcgcacgttaatc 6440

>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0011D16
          Length = 177329

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    gtagaggtgttagggagga 52
             |||||||||||||||||||
Sbjct: 48610 gtagaggtgttagggagga 48628

>dbj|AP005727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0038I09
          Length = 153520

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    gtagaggtgttagggagga 52
             |||||||||||||||||||
Sbjct: 81960 gtagaggtgttagggagga 81978

>emb|Z98941.2|HS204E5 Human DNA sequence from clone XX-204E5 on chromosome 12, complete
             sequence
          Length = 129192

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   gctgtaagtcaaatgatat 125
             |||||||||||||||||||
Sbjct: 70957 gctgtaagtcaaatgatat 70975


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 839,680
Number of Sequences: 3902068
Number of extensions: 839680
Number of successful extensions: 54494
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54411
Number of HSP's gapped (non-prelim): 83
length of query: 149
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 128
effective length of database: 17,151,101,840
effective search space: 2195341035520
effective search space used: 2195341035520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)