>ref|NM_188605.1| Oryza sativa (japonica cultivar-group), Ozsa8208 predicted mRNA
          Length = 996

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                       
Query: 371 gctggtctgaccacccagatgctgctgagcctgttccgggtgaagggcatcgtccactgg 430
           ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 229 gctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcactgg 288

                        
Query: 431 ggcatcgctggca 443
           |||||||| ||||
Sbjct: 289 ggcatcgccggca 301



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Plus

                                                                       
Query: 122 atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 181
           ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 43  atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 102

                                                                  
Query: 182 aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 233
           |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 103 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 156

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                           
Query: 371     gctggtctgaccacccagatgctgctgagcctgttccgggtgaagggcatcgtccactgg 430
               ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 7185808 gctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcactgg 7185749

                            
Query: 431     ggcatcgctggca 443
               |||||||| ||||
Sbjct: 7185748 ggcatcgccggca 7185736



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Minus

                                                                           
Query: 122     atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 181
               ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 7187148 atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 7187089

                                                                      
Query: 182     aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 233
               |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 7187088 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 7187035



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                           
Query: 294     aagggcgaaggtttcgctttggaaccatcgaaggccaaagcgtcgtcatggtcatgacag 353
               |||| |||||||||||||| ||  |||| |  ||||||| ||| ||||||||||||||||
Sbjct: 7186079 aaggacgaaggtttcgcttcggtgccattgggggccaaaacgttgtcatggtcatgacag 7186020

                          
Query: 354     gactgagcatg 364
               | || ||||||
Sbjct: 7186019 ggcttagcatg 7186009

>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485D09
          Length = 150594

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                         
Query: 371   gctggtctgaccacccagatgctgctgagcctgttccgggtgaagggcatcgtccactgg 430
             ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 80456 gctgggctgacgacccagctgctgctgagcctgttcagggtgaagggcatcgtgcactgg 80397

                          
Query: 431   ggcatcgctggca 443
             |||||||| ||||
Sbjct: 80396 ggcatcgccggca 80384



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Minus

                                                                         
Query: 122   atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 181
             ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 81796 atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 81737

                                                                    
Query: 182   aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 233
             |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 81736 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 81683



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                         
Query: 294   aagggcgaaggtttcgctttggaaccatcgaaggccaaagcgtcgtcatggtcatgacag 353
             |||| |||||||||||||| ||  |||| |  ||||||| ||| ||||||||||||||||
Sbjct: 80727 aaggacgaaggtttcgcttcggtgccattgggggccaaaacgttgtcatggtcatgacag 80668

                        
Query: 354   gactgagcatg 364
             | || ||||||
Sbjct: 80667 ggcttagcatg 80657

>gb|AY108102.1| Zea mays PCO073188 mRNA sequence
          Length = 408

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 104/126 (82%)
 Strand = Plus / Plus

                                                                       
Query: 109 ggcggtgacgctaatggccacggcggcggaggggtacatcactcagaagacgtgggcagc 168
           |||||||  ||| ||||| |||||| ||||||| | |||| |  |||||||||||   ||
Sbjct: 166 ggcggtggtgctcatggcaacggcgtcggagggcttcatctccaagaagacgtggagcgc 225

                                                                       
Query: 169 catccgccgggcgaaccgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacga 228
           |||||| |||||| |||||| |||||| ||||| || || || ||||||||| |||||||
Sbjct: 226 catccggcgggcggaccgcgacgggcccttcgtggggctggtggtgcccaacgcctacga 285

                 
Query: 229 gatggt 234
           ||||||
Sbjct: 286 gatggt 291



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 291 tccaagggcgaaggtttcgctttggaaccatcgaaggccaaagcgtcgtcatggtcatga 350
           ||||||||||| | || ||||| ||||| || | | |||||| ||| |||||||||||||
Sbjct: 348 tccaagggcgacgattccgcttcggaactattggaagccaaaacgttgtcatggtcatga 407

            
Query: 351 c 351
           |
Sbjct: 408 c 408

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 194     ccgttcgtcggcctcgtcgtgcccaaca 221
               |||||||||||||||||||| |||||||
Sbjct: 4982931 ccgttcgtcggcctcgtcgtccccaaca 4982958

>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 108    tggcggtgacgctaatggccacggcggcgg 137
              ||||||| ||||||||||||| ||||||||
Sbjct: 128654 tggcggtcacgctaatggccaaggcggcgg 128683

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 108      tggcggtgacgctaatggccacggcggcgg 137
                ||||||| ||||||||||||| ||||||||
Sbjct: 18486224 tggcggtcacgctaatggccaaggcggcgg 18486253

>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a
              novel gene, complete sequence
          Length = 203279

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 387    agatgctgctgagcctgttcc 407
              |||||||||||||||||||||
Sbjct: 132755 agatgctgctgagcctgttcc 132735

>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145
             biosynthetic gene cluster, complete sequence
          Length = 126933

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   tggccacggcggcggaggggt 143
             |||||||||||||||||||||
Sbjct: 27070 tggccacggcggcggaggggt 27090

>gb|AC123528.2| Oryza sativa chromosome 11 clone  OSJNBa0078E03, complete sequence
          Length = 149493

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    ggccacggcggcggaggggt 143
              ||||||||||||||||||||
Sbjct: 122382 ggccacggcggcggaggggt 122401



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    ggccacggcggcggaggggt 143
              ||||||||||||||||||||
Sbjct: 117551 ggccacggcggcggaggggt 117532

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 387     agatgctgctgagcctgttc 406
               ||||||||||||||||||||
Sbjct: 1737145 agatgctgctgagcctgttc 1737126

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 197     ttcgtcggcctcgtcgtgcc 216
               ||||||||||||||||||||
Sbjct: 2901101 ttcgtcggcctcgtcgtgcc 2901082

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 151     tcagaagacgtgggcagccatccgccgg 178
               ||||||||| |||||| |||||||||||
Sbjct: 3462345 tcagaagacttgggcaaccatccgccgg 3462372

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     ccgggcgaaccgcgccgggc 194
               ||||||||||||||||||||
Sbjct: 2930937 ccgggcgaaccgcgccgggc 2930956

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   ccgggcgaaccgcgccgggc 194
             ||||||||||||||||||||
Sbjct: 58310 ccgggcgaaccgcgccgggc 58329

>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 194    ccgttcgtcggcctcgtcgtgcccaaca 221
              ||||||||||| |||||||| |||||||
Sbjct: 260525 ccgttcgtcgggctcgtcgtccccaaca 260498

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 175     ccgggcgaaccgcgccgggc 194
               ||||||||||||||||||||
Sbjct: 3903912 ccgggcgaaccgcgccgggc 3903931

>emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IRF1 gene, OCTN2 gene and
             OCTN1 gene (partial)
          Length = 113629

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 324   aaggccaaagcgtcgtcatggtca 347
             ||||||||| ||||||||||||||
Sbjct: 98145 aaggccaaaacgtcgtcatggtca 98168

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 181     gaaccgcgccgggccgttcg 200
               ||||||||||||||||||||
Sbjct: 3054010 gaaccgcgccgggccgttcg 3053991

>gb|AC105264.3| Drosophila melanogaster 3L BAC RP98-17K18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177583

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    agtcgcccagcttcgtggcc 265
              ||||||||||||||||||||
Sbjct: 139683 agtcgcccagcttcgtggcc 139702

>gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   agtcgcccagcttcgtggcc 265
             ||||||||||||||||||||
Sbjct: 26990 agtcgcccagcttcgtggcc 27009

>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    ttcgtcggcctcgtcgtgcc 216
              ||||||||||||||||||||
Sbjct: 294762 ttcgtcggcctcgtcgtgcc 294781

>ref|NM_206235.1| Drosophila melanogaster CG13921-RB, transcript variant B (CG13921),
            mRNA
          Length = 4265

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  agtcgcccagcttcgtggcc 265
            ||||||||||||||||||||
Sbjct: 3389 agtcgcccagcttcgtggcc 3408

>ref|NM_139399.1| Drosophila melanogaster CG13921-RA, transcript variant A (CG13921),
            mRNA
          Length = 4857

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  agtcgcccagcttcgtggcc 265
            ||||||||||||||||||||
Sbjct: 3971 agtcgcccagcttcgtggcc 3990

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     ggccacggcggcggaggggt 143
               ||||||||||||||||||||
Sbjct: 1758208 ggccacggcggcggaggggt 1758227

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 250      gcccagcttcgtggccagcaagagcatc 277
                ||||||||||||||| | ||||||||||
Sbjct: 18607119 gcccagcttcgtggcaaacaagagcatc 18607146

>gb|AF448145.2| Myxococcus xanthus che3 chemosensory regulator gene cluster, complete
             sequence
          Length = 17906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   tcgcccagcttcgtggccag 267
             ||||||||||||||||||||
Sbjct: 17872 tcgcccagcttcgtggccag 17891

>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    agcttcgtggccagcaagag 273
              ||||||||||||||||||||
Sbjct: 478483 agcttcgtggccagcaagag 478502

>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0020P04
          Length = 153894

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 250   gcccagcttcgtggccagcaagagcatc 277
             ||||||||||||||| | ||||||||||
Sbjct: 59222 gcccagcttcgtggcaaacaagagcatc 59249

>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete
              sequence
          Length = 303191

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    agtcgcccagcttcgtggcc 265
              ||||||||||||||||||||
Sbjct: 216811 agtcgcccagcttcgtggcc 216830

>gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, region 62A10-62B5, P1 clones
              DS02777, DS03222, DS02345, and DS04808, complete sequence
          Length = 257867

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    agtcgcccagcttcgtggcc 265
              ||||||||||||||||||||
Sbjct: 139977 agtcgcccagcttcgtggcc 139996

>gb|BT001721.1| Drosophila melanogaster RE69223 full insert cDNA
          Length = 4287

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  agtcgcccagcttcgtggcc 265
            ||||||||||||||||||||
Sbjct: 3388 agtcgcccagcttcgtggcc 3407

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     ggccacggcggcggaggggt 143
               ||||||||||||||||||||
Sbjct: 1755929 ggccacggcggcggaggggt 1755948

>dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT42D17, TM0108,
             complete sequence
          Length = 117124

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    tcatggccgtcgtcctcgtg 109
             ||||||||||||||||||||
Sbjct: 55182 tcatggccgtcgtcctcgtg 55201


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,702,567
Number of Sequences: 3902068
Number of extensions: 2702567
Number of successful extensions: 57225
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56425
Number of HSP's gapped (non-prelim): 797
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)