ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet119e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470610.1| Oryza sativa (japonica cultivar-group), predic... 60 7e-06
2gb|AY554031.1| Oryza sativa (japonica cultivar-group) clone S648... 60 7e-06
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 60 7e-06
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
5gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
6gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
7emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ... 46 0.10
8emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 46 0.10
9emb|BX640413.1| Bordetella pertussis strain Tohama I, complete g... 46 0.10
10dbj|AB047272.1| Pseudomonas sp. CA10 cat operon (catR, catB, cat... 46 0.10
11ref|XM_520459.1| PREDICTED: Pan troglodytes similar to SWI/SNF-r... 44 0.40
12emb|AL359076.16| Human DNA sequence from clone RP11-264I13 on ch... 44 0.40
13gb|BC068252.1| Homo sapiens SWI/SNF related, matrix associated, ... 44 0.40
14gb|BC040029.1| Homo sapiens SWI/SNF related, matrix associated, ... 44 0.40
15ref|NM_139045.2| Homo sapiens SWI/SNF related, matrix associated... 44 0.40
16ref|NM_003070.3| Homo sapiens SWI/SNF related, matrix associated... 44 0.40
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
18dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
19dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
20dbj|D26155.1|HUMHSNF2A Homo sapiens mRNA for transcriptional act... 44 0.40
21gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 44 0.40
22emb|X72889.1|HSHBRM H.sapiens hbrm mRNA 44 0.40
23gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipie... 42 1.6
24gb|AC008324.3| Drosophila melanogaster clone BACR25K01, complete... 42 1.6
25gb|AC008325.5| Drosophila melanogaster clone BACR05M06, complete... 42 1.6
26gb|AC158520.2| Mus musculus BAC clone RP23-434P22 from chromosom... 42 1.6
27ref|XM_384577.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 42 1.6
28gb|AC084387.1| Mus musculus BAC clone RP23-93H2 from 7, complete... 42 1.6
29gb|AY386297.1| Chaoborus flavicans clone B1/c5 microsatellite se... 42 1.6
30gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.6
31emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.6
32emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 42 1.6
33emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 42 1.6
34emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 42 1.6
35gb|AE014174.1| Mus musculus piebald deletion region section 2 of... 42 1.6
36gb|AY113444.1| Drosophila melanogaster RE29005 full insert cDNA 42 1.6
37ref|NM_164639.1| Drosophila melanogaster vrille CG14029-RC, tran... 42 1.6
38ref|NM_057843.2| Drosophila melanogaster vrille CG14029-RA, tran... 42 1.6
39gb|AC131568.5| Homo sapiens chromosome 8, clone RP11-1146N6, com... 42 1.6
40ref|XM_564447.1| Anopheles gambiae str. PEST ENSANGP00000029470 ... 42 1.6
41gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18... 42 1.6
42dbj|AP005715.3| Homo sapiens genomic DNA, chromosome 8q24, clone... 42 1.6
43emb|CT009530.5| Mouse DNA sequence from clone RP23-33O7 on chrom... 42 1.6
44gb|AC158570.5| Mus musculus chromosome 7, clone RP24-62O14, comp... 42 1.6
45emb|Y11837.1|DMVRILLE Drosophila melanogaster mRNA for bZIP tran... 42 1.6
46gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.3
47ref|XM_483615.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
48ref|XM_507603.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.3
49ref|XM_507317.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.3
50ref|XM_463939.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
51gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.3
52gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.3
53gb|AY530756.1| Myxococcus xanthus strain DK1622 ORFA, HthA (hthA... 40 6.3
54emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.3
55gb|AC125065.3| Mus musculus BAC clone RP23-430G6 from chromosome... 40 6.3
56emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H1... 40 6.3
57emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.3
58emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 40 6.3
59emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 40 6.3
60emb|AJ632203.2| Streptomyces antibioticus oviedomycin biosynthet... 40 6.3
61gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, co... 40 6.3
62gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.3
63gb|DQ397836.1| Cenarchaeum symbiosum clone C02H06, complete sequ... 40 6.3
64gb|DQ397834.1| Cenarchaeum symbiosum clone C02E12, complete sequ... 40 6.3
65dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.3
66gb|AC010025.6| Drosophila melanogaster 3L BAC RPCI98-20B1 (Roswe... 40 6.3
67gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence 40 6.3
68gb|AE012041.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.3
69gb|AE012507.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.3
70ref|NM_140350.2| Drosophila melanogaster CG11009-RA (CG11009), mRNA 40 6.3
71ref|XM_695106.1| PREDICTED: Danio rerio similar to Protein KIAA1... 40 6.3
72gb|AY060828.1| Drosophila melanogaster GM01318 full length cDNA 40 6.3
73gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.3
74emb|BX323878.10| Zebrafish DNA sequence from clone CH211-57E23 i... 40 6.3
75gb|S72345.1| RI beta =cAMP-dependent protein kinase RI beta subu... 40 6.3
76gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.3
77dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
78dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
79ref|XM_394501.2| PREDICTED: Apis mellifera similar to GA10742-PA... 40 6.3
80gb|AE004903.1| Pseudomonas aeruginosa PAO1, section 464 of 529 o... 40 6.3
81gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.3
82dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.3
83dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
84dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
85emb|AL954707.18| Mouse DNA sequence from clone RP23-359C15 on ch... 40 6.3
86dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
87dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
88emb|AJ277755.1|LPN277755 Legionella pneumophila serogroup 1, 30 ... 40 6.3
89dbj|AK119660.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
90dbj|AK106726.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
91emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.3
92dbj|AK060536.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
93gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45... 40 6.3
94gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.3
95dbj|D87261.1| Oryza sativa (japonica cultivar-group) mRNA for PC... 40 6.3 
>ref|XM_470610.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 879

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 288 cgacgccggcctggcgctgggcctgtccct 317
           ||||||||||||||||||||||||||||||
Sbjct: 30  cgacgccggcctggcgctgggcctgtccct 59



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 390 ggagccgtcgctgaccctcagcatgccggacgac 423
           |||||||||||||||||| ||| |||| ||||||
Sbjct: 150 ggagccgtcgctgaccctgagcttgcccgacgac 183
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>gb|AY554031.1| Oryza sativa (japonica cultivar-group) clone S6489 Hox19 (hox19)
           mRNA, partial cds
          Length = 440

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 288 cgacgccggcctggcgctgggcctgtccct 317
           ||||||||||||||||||||||||||||||
Sbjct: 267 cgacgccggcctggcgctgggcctgtccct 296



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 390 ggagccgtcgctgaccctcagcatgccggacgac 423
           |||||||||||||||||| ||| |||| ||||||
Sbjct: 387 ggagccgtcgctgaccctgagcttgcccgacgac 420
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                             
Query: 288     cgacgccggcctggcgctgggcctgtccct 317
               ||||||||||||||||||||||||||||||
Sbjct: 6901558 cgacgccggcctggcgctgggcctgtccct 6901587



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 390     ggagccgtcgctgaccctcagcatgccggacgac 423
               |||||||||||||||||| ||| |||| ||||||
Sbjct: 6901678 ggagccgtcgctgaccctgagcttgcccgacgac 6901711
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                             
Query: 288     cgacgccggcctggcgctgggcctgtccct 317
               ||||||||||||||||||||||||||||||
Sbjct: 6899453 cgacgccggcctggcgctgggcctgtccct 6899482



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 390     ggagccgtcgctgaccctcagcatgccggacgac 423
               |||||||||||||||||| ||| |||| ||||||
Sbjct: 6899573 ggagccgtcgctgaccctgagcttgcccgacgac 6899606
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>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
             complete sequence
          Length = 120392

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                           
Query: 288   cgacgccggcctggcgctgggcctgtccct 317
             ||||||||||||||||||||||||||||||
Sbjct: 97491 cgacgccggcctggcgctgggcctgtccct 97520



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 390   ggagccgtcgctgaccctcagcatgccggacgac 423
             |||||||||||||||||| ||| |||| ||||||
Sbjct: 97611 ggagccgtcgctgaccctgagcttgcccgacgac 97644
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>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                           
Query: 288   cgacgccggcctggcgctgggcctgtccct 317
             ||||||||||||||||||||||||||||||
Sbjct: 68155 cgacgccggcctggcgctgggcctgtccct 68184



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 390   ggagccgtcgctgaccctcagcatgccggacgac 423
             |||||||||||||||||| ||| |||| ||||||
Sbjct: 68275 ggagccgtcgctgaccctgagcttgcccgacgac 68308
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>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 292    gccggcctggcgctgggcctgtccctg 318
              ||||||||||||||||||||| |||||
Sbjct: 344063 gccggcctggcgctgggcctgaccctg 344089
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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment
           2/14
          Length = 349146

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 292 gccggcctggcgctgggcctgtccctg 318
           ||||||||||||||||||||| |||||
Sbjct: 503 gccggcctggcgctgggcctgaccctg 529
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>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 292   gccggcctggcgctgggcctgtccctg 318
             ||||||||||||||||||||| |||||
Sbjct: 94361 gccggcctggcgctgggcctgaccctg 94387
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>dbj|AB047272.1| Pseudomonas sp. CA10 cat operon (catR, catB, catC, catA, ORFcat5,
            ORFcat6, ORFcat7, ORFcat8), complete cds
          Length = 8918

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 288  cgacgccggcctggcgctgggcctgtc 314
            |||||||||||||| ||||||||||||
Sbjct: 1134 cgacgccggcctggagctgggcctgtc 1108
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>ref|XM_520459.1| PREDICTED: Pan troglodytes similar to SWI/SNF-related
           matrix-associated actin-dependent regulator of chromatin
           a2 isoform b; SNF2-alpha; SNF2-like 2; SNF2/SWI2-like
           protein 2; sucrose nonfermenting 2-like protein 2;
           global transcription activator homologous sequence ...
           (LOC464965), mRNA
          Length = 4418

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 343 cgcagcaacaacagcagccggc 364
           ||||||||||||||||||||||
Sbjct: 820 cgcagcaacaacagcagccggc 841
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>emb|AL359076.16| Human DNA sequence from clone RP11-264I13 on chromosome 9 Contains the
             5' end of the SMARCA2 gene for SWI/SNF related matrix
             associated actin dependent regulator of chromatin
             subfamily a member 2 (SNF2LA), a novel gene and two CpG
             islands, complete sequence
          Length = 138859

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 343   cgcagcaacaacagcagccggc 364
             ||||||||||||||||||||||
Sbjct: 32283 cgcagcaacaacagcagccggc 32304
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>gb|BC068252.1| Homo sapiens SWI/SNF related, matrix associated, actin dependent
           regulator of chromatin, subfamily a, member 2, mRNA
           (cDNA clone IMAGE:4822434), containing frame-shift
           errors
          Length = 5616

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 343 cgcagcaacaacagcagccggc 364
           ||||||||||||||||||||||
Sbjct: 965 cgcagcaacaacagcagccggc 986
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>gb|BC040029.1| Homo sapiens SWI/SNF related, matrix associated, actin dependent
           regulator of chromatin, subfamily a, member 2, mRNA
           (cDNA clone IMAGE:5752305), partial cds
          Length = 993

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 343 cgcagcaacaacagcagccggc 364
           ||||||||||||||||||||||
Sbjct: 842 cgcagcaacaacagcagccggc 863
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>ref|NM_139045.2| Homo sapiens SWI/SNF related, matrix associated, actin dependent
           regulator of chromatin, subfamily a, member 2 (SMARCA2),
           transcript variant 2, mRNA
          Length = 5703

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 343 cgcagcaacaacagcagccggc 364
           ||||||||||||||||||||||
Sbjct: 842 cgcagcaacaacagcagccggc 863
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>ref|NM_003070.3| Homo sapiens SWI/SNF related, matrix associated, actin dependent
           regulator of chromatin, subfamily a, member 2 (SMARCA2),
           transcript variant 1, mRNA
          Length = 5758

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 343 cgcagcaacaacagcagccggc 364
           ||||||||||||||||||||||
Sbjct: 842 cgcagcaacaacagcagccggc 863
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 296      gcctggcgctgggcctgtccct 317
                ||||||||||||||||||||||
Sbjct: 15857762 gcctggcgctgggcctgtccct 15857783



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 380     cgccgtcggcggagccgtcg 399
               ||||||||||||||||||||
Sbjct: 1237362 cgccgtcggcggagccgtcg 1237343
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>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1057_F01
          Length = 120026

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 296  gcctggcgctgggcctgtccct 317
            ||||||||||||||||||||||
Sbjct: 1437 gcctggcgctgggcctgtccct 1458
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>dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1342_D02
          Length = 125460

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 296    gcctggcgctgggcctgtccct 317
              ||||||||||||||||||||||
Sbjct: 115702 gcctggcgctgggcctgtccct 115723
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>dbj|D26155.1|HUMHSNF2A Homo sapiens mRNA for transcriptional activator hSNF2a, complete cds
          Length = 5257

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 343  cgcagcaacaacagcagccggc 364
            ||||||||||||||||||||||
Sbjct: 1040 cgcagcaacaacagcagccggc 1061
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 291     cgccggcctggcgctgggcctg 312
               ||||||||||||||||||||||
Sbjct: 1590011 cgccggcctggcgctgggcctg 1589990
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>emb|X72889.1|HSHBRM H.sapiens hbrm mRNA
          Length = 5959

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 343 cgcagcaacaacagcagccggc 364
           ||||||||||||||||||||||
Sbjct: 953 cgcagcaacaacagcagccggc 974
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>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940135D9, complete sequence
          Length = 93659

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   ctggcgctgggcctgtccctg 318
             |||||||||||||||||||||
Sbjct: 49205 ctggcgctgggcctgtccctg 49225
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>gb|AC008324.3| Drosophila melanogaster clone BACR25K01, complete sequence
          Length = 172939

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 340    caccgcagcaacaacagcagc 360
              |||||||||||||||||||||
Sbjct: 152152 caccgcagcaacaacagcagc 152172
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>gb|AC008325.5| Drosophila melanogaster clone BACR05M06, complete sequence
          Length = 166423

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 340   caccgcagcaacaacagcagc 360
             |||||||||||||||||||||
Sbjct: 82317 caccgcagcaacaacagcagc 82337
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>gb|AC158520.2| Mus musculus BAC clone RP23-434P22 from chromosome 14, complete
             sequence
          Length = 201291

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    tgcacacacgcgtgcatacac 85
             |||||||||||||||||||||
Sbjct: 81729 tgcacacacgcgtgcatacac 81749
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>ref|XM_384577.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04401.1)
           partial mRNA
          Length = 1140

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 292 gccggcctggcgctgggcctg 312
           |||||||||||||||||||||
Sbjct: 48  gccggcctggcgctgggcctg 28
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>gb|AC084387.1| Mus musculus BAC clone RP23-93H2 from 7, complete sequence
          Length = 175948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     tgcacacacgcgtgcatacac 85
              |||||||||||||||||||||
Sbjct: 131077 tgcacacacgcgtgcatacac 131057
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>gb|AY386297.1| Chaoborus flavicans clone B1/c5 microsatellite sequence
          Length = 418

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 67  cacacacgcgtgcatacactc 87
           |||||||||||||||||||||
Sbjct: 248 cacacacgcgtgcatacactc 228
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 292    gccggcctggcgctgggcctg 312
              |||||||||||||||||||||
Sbjct: 447480 gccggcctggcgctgggcctg 447460
to top
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   gccggcctggcgctgggcctg 312
             |||||||||||||||||||||
Sbjct: 12238 gccggcctggcgctgggcctg 12258
to top
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 292    gccggcctggcgctgggcctg 312
              |||||||||||||||||||||
Sbjct: 223078 gccggcctggcgctgggcctg 223058
to top
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 292    gccggcctggcgctgggcctg 312
              |||||||||||||||||||||
Sbjct: 249833 gccggcctggcgctgggcctg 249813
to top
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 317    tgggaggcgggtcgtcgtcgg 337
              |||||||||||||||||||||
Sbjct: 148320 tgggaggcgggtcgtcgtcgg 148340
to top
>gb|AE014174.1| Mus musculus piebald deletion region section 2 of 11 of the complete
              sequence
          Length = 400029

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     tgcacacacgcgtgcatacac 85
              |||||||||||||||||||||
Sbjct: 224089 tgcacacacgcgtgcatacac 224109
to top
>gb|AY113444.1| Drosophila melanogaster RE29005 full insert cDNA
          Length = 3073

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 340  caccgcagcaacaacagcagc 360
            |||||||||||||||||||||
Sbjct: 1240 caccgcagcaacaacagcagc 1260
to top
>ref|NM_164639.1| Drosophila melanogaster vrille CG14029-RC, transcript variant C
            (vri), mRNA
          Length = 3430

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 340  caccgcagcaacaacagcagc 360
            |||||||||||||||||||||
Sbjct: 1240 caccgcagcaacaacagcagc 1260
to top
>ref|NM_057843.2| Drosophila melanogaster vrille CG14029-RA, transcript variant A
            (vri), mRNA
          Length = 3784

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 340  caccgcagcaacaacagcagc 360
            |||||||||||||||||||||
Sbjct: 1594 caccgcagcaacaacagcagc 1614
to top
>gb|AC131568.5| Homo sapiens chromosome 8, clone RP11-1146N6, complete sequence
          Length = 150697

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 308   gcctgtccctgggaggcgggt 328
             |||||||||||||||||||||
Sbjct: 70716 gcctgtccctgggaggcgggt 70696
to top
>ref|XM_564447.1| Anopheles gambiae str. PEST ENSANGP00000029470
           (ENSANGG00000021725), partial mRNA
          Length = 672

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 344 gcagcaacaacagcagccggc 364
           |||||||||||||||||||||
Sbjct: 224 gcagcaacaacagcagccggc 244
to top
>gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18 of 83 of the complete
              sequence
          Length = 319287

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 340    caccgcagcaacaacagcagc 360
              |||||||||||||||||||||
Sbjct: 192556 caccgcagcaacaacagcagc 192576
to top
>dbj|AP005715.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1181D6, complete
              sequence
          Length = 134425

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 308    gcctgtccctgggaggcgggt 328
              |||||||||||||||||||||
Sbjct: 123538 gcctgtccctgggaggcgggt 123518
to top
>emb|CT009530.5| Mouse DNA sequence from clone RP23-33O7 on chromosome 14, complete
             sequence
          Length = 188700

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    tgcacacacgcgtgcatacac 85
             |||||||||||||||||||||
Sbjct: 32221 tgcacacacgcgtgcatacac 32201
to top
>gb|AC158570.5| Mus musculus chromosome 7, clone RP24-62O14, complete sequence
          Length = 184623

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     tgcacacacgcgtgcatacac 85
              |||||||||||||||||||||
Sbjct: 121805 tgcacacacgcgtgcatacac 121825
to top
>emb|Y11837.1|DMVRILLE Drosophila melanogaster mRNA for bZIP transcription factor (vrille
            gene)
          Length = 3807

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 340  caccgcagcaacaacagcagc 360
            |||||||||||||||||||||
Sbjct: 1594 caccgcagcaacaacagcagc 1614
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    ggcgctgggcctgtccctgg 319
              ||||||||||||||||||||
Sbjct: 545658 ggcgctgggcctgtccctgg 545677
to top
>ref|XM_483615.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1454

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gcagcaacaacagcagccgg 363
            ||||||||||||||||||||
Sbjct: 1069 gcagcaacaacagcagccgg 1088
to top
>ref|XM_507603.1| PREDICTED Oryza sativa (japonica cultivar-group), P0623F08.31 mRNA
          Length = 1577

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gcagcaacaacagcagccgg 363
            ||||||||||||||||||||
Sbjct: 1068 gcagcaacaacagcagccgg 1087
to top
>ref|XM_507317.2| PREDICTED Oryza sativa (japonica cultivar-group), P0623F08.31 mRNA
          Length = 1616

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gcagcaacaacagcagccgg 363
            ||||||||||||||||||||
Sbjct: 1070 gcagcaacaacagcagccgg 1089
to top
>ref|XM_463939.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1693

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 cgccgtcggcggagccgtcg 399
           ||||||||||||||||||||
Sbjct: 264 cgccgtcggcggagccgtcg 245
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    acgccggcctggcgctgggc 309
              ||||||||||||||||||||
Sbjct: 651901 acgccggcctggcgctgggc 651920
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 439     cgcaccgcgtccggcggcgt 458
               ||||||||||||||||||||
Sbjct: 2499899 cgcaccgcgtccggcggcgt 2499918
to top
>gb|AY530756.1| Myxococcus xanthus strain DK1622 ORFA, HthA (hthA), HthB (hthB),
           and ORFB genes, complete cds
          Length = 5924

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 ccgcagcaacaacagcagcc 361
           ||||||||||||||||||||
Sbjct: 870 ccgcagcaacaacagcagcc 851
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     acgccggcctggcgctgggc 309
               ||||||||||||||||||||
Sbjct: 4629735 acgccggcctggcgctgggc 4629754
to top
>gb|AC125065.3| Mus musculus BAC clone RP23-430G6 from chromosome 5, complete sequence
          Length = 205734

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 211   cttgggtcaagctagctagctaga 234
             |||||| |||||||||||||||||
Sbjct: 55775 cttggggcaagctagctagctaga 55798
to top
>emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H10 on chromosome 10 Contains a
              vomeronasal receptor (V1R) pseudogene, a cubilin (intrinsic
              factor-cobalamin receptor) (CUBN) pseudogene, gene
              KIAA0187, two novel genes, the gene for a novel protein
              similar to Ras suppressor protein 1 (RSU1) and four CpG
              islands, complete sequence
          Length = 197864

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    accgcagcaacaacagcagc 360
              ||||||||||||||||||||
Sbjct: 119276 accgcagcaacaacagcagc 119257
to top
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 291    cgccggcctggcgctgggcctgtc 314
              ||||||||||| ||||||||||||
Sbjct: 239792 cgccggcctggtgctgggcctgtc 239769
to top
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 291   cgccggcctggcgctgggcctgtc 314
             ||||||||||| ||||||||||||
Sbjct: 38680 cgccggcctggtgctgggcctgtc 38657
to top
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 291    cgccggcctggcgctgggcctgtc 314
              ||||||||||| ||||||||||||
Sbjct: 116777 cgccggcctggtgctgggcctgtc 116754
to top
>emb|AJ632203.2| Streptomyces antibioticus oviedomycin biosynthetic gene cluster, strain
             ATCC 11891
          Length = 24720

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 433   accggccgcaccgcgtccggcggc 456
             ||||||||| ||||||||||||||
Sbjct: 20072 accggccgccccgcgtccggcggc 20095
to top
>gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, complete sequence
          Length = 160452

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  cctgtccctgggaggcgggt 328
            ||||||||||||||||||||
Sbjct: 9917 cctgtccctgggaggcgggt 9936
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 297     cctggcgctgggcctgtccctggg 320
               |||||||||||||||| |||||||
Sbjct: 6894013 cctggcgctgggcctggccctggg 6894036
to top
>gb|DQ397836.1| Cenarchaeum symbiosum clone C02H06, complete sequence
          Length = 39848

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   cggcggagccgtcgctgacc 405
             ||||||||||||||||||||
Sbjct: 19844 cggcggagccgtcgctgacc 19863
to top
>gb|DQ397834.1| Cenarchaeum symbiosum clone C02E12, complete sequence
          Length = 39848

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   cggcggagccgtcgctgacc 405
             ||||||||||||||||||||
Sbjct: 20005 cggcggagccgtcgctgacc 19986
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    acgccggcctggcgctgggc 309
              ||||||||||||||||||||
Sbjct: 497239 acgccggcctggcgctgggc 497220
to top
>gb|AC010025.6| Drosophila melanogaster 3L BAC RPCI98-20B1 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 175679

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   gcagcaacaacagcagccgg 363
             ||||||||||||||||||||
Sbjct: 57760 gcagcaacaacagcagccgg 57779
to top
>gb|AC125391.10| Pan troglodytes clone rp43-115b1, complete sequence
          Length = 155629

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   accgcagcaacaacagcagc 360
             ||||||||||||||||||||
Sbjct: 44828 accgcagcaacaacagcagc 44847
to top
>gb|AE012041.1| Xanthomonas axonopodis pv. citri str. 306,  section 419 of 469 of the
            complete genome
          Length = 12145

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  acgccggcctggcgctgggc 309
            ||||||||||||||||||||
Sbjct: 4424 acgccggcctggcgctgggc 4443
to top
>gb|AE012507.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 415
            of 460 of the complete genome
          Length = 12726

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  acgccggcctggcgctgggc 309
            ||||||||||||||||||||
Sbjct: 4278 acgccggcctggcgctgggc 4297
to top
>ref|NM_140350.2| Drosophila melanogaster CG11009-RA (CG11009), mRNA
          Length = 1743

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gcagcaacaacagcagccgg 363
           ||||||||||||||||||||
Sbjct: 801 gcagcaacaacagcagccgg 820
to top
>ref|XM_695106.1| PREDICTED: Danio rerio similar to Protein KIAA1093 (LOC571509), mRNA
          Length = 6804

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 341  accgcagcaacaacagcagc 360
            ||||||||||||||||||||
Sbjct: 4077 accgcagcaacaacagcagc 4096
to top
>gb|AY060828.1| Drosophila melanogaster GM01318 full length cDNA
          Length = 1747

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 gcagcaacaacagcagccgg 363
           ||||||||||||||||||||
Sbjct: 768 gcagcaacaacagcagccgg 787
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 430     atgaccggccgcaccgcgtccggc 453
               |||||||||||||||||| |||||
Sbjct: 1818307 atgaccggccgcaccgcgaccggc 1818330
to top
>emb|BX323878.10| Zebrafish DNA sequence from clone CH211-57E23 in linkage group 12,
              complete sequence
          Length = 190541

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    accgcagcaacaacagcagc 360
              ||||||||||||||||||||
Sbjct: 160041 accgcagcaacaacagcagc 160060
to top
>gb|S72345.1| RI beta =cAMP-dependent protein kinase RI beta subunit {exons I and
            II, promoter} [mice, Genomic, 3511 nt]
          Length = 3511

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 211  cttgggtcaagctagctagctaga 234
            |||||| |||||||||||||||||
Sbjct: 2895 cttggggcaagctagctagctaga 2872
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     acgccggcctggcgctgggc 309
               ||||||||||||||||||||
Sbjct: 4661251 acgccggcctggcgctgggc 4661270
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 344      gcagcaacaacagcagccgg 363
                ||||||||||||||||||||
Sbjct: 27289523 gcagcaacaacagcagccgg 27289504
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 290     acgccggcctggcgctgggcctgtccct 317
               |||||||||||| ||||||||| |||||
Sbjct: 9200475 acgccggcctggtgctgggcctatccct 9200448
to top
>ref|XM_394501.2| PREDICTED: Apis mellifera similar to GA10742-PA (LOC411028), mRNA
          Length = 2802

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 341 accgcagcaacaacagcagc 360
           ||||||||||||||||||||
Sbjct: 531 accgcagcaacaacagcagc 550
to top
>gb|AE004903.1| Pseudomonas aeruginosa PAO1, section 464 of 529 of the complete genome
          Length = 12460

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   acgccggcctggcgctgggc 309
             ||||||||||||||||||||
Sbjct: 11999 acgccggcctggcgctgggc 11980
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 273     gcaggaggaggtccacgacgccggcctg 300
               |||||||||||||| || ||||||||||
Sbjct: 2649953 gcaggaggaggtccgcgccgccggcctg 2649926



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    cgacgccggcctggcgctgg 307
              ||||||||||||||||||||
Sbjct: 820480 cgacgccggcctggcgctgg 820461
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 446     cgtccggcggcgtgtcgtcc 465
               ||||||||||||||||||||
Sbjct: 2599430 cgtccggcggcgtgtcgtcc 2599411
to top
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0662B01
          Length = 155913

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 290   acgccggcctggcgctgggcctgtccct 317
             |||||||||||| ||||||||| |||||
Sbjct: 94497 acgccggcctggtgctgggcctatccct 94470
to top
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0575F10
          Length = 150462

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   cgccgtcggcggagccgtcg 399
             ||||||||||||||||||||
Sbjct: 68453 cgccgtcggcggagccgtcg 68434
to top
>emb|AL954707.18| Mouse DNA sequence from clone RP23-359C15 on chromosome 2, complete
              sequence
          Length = 205927

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     tgcacacacgcgtgcatacactcc 88
              ||||||||| ||||||||||||||
Sbjct: 103098 tgcacacacacgtgcatacactcc 103121
to top
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0018H03, complete sequence
          Length = 94450

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   cgccgtcggcggagccgtcg 399
             ||||||||||||||||||||
Sbjct: 11391 cgccgtcggcggagccgtcg 11372
to top
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0623F08
          Length = 154540

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    gcagcaacaacagcagccgg 363
              ||||||||||||||||||||
Sbjct: 112726 gcagcaacaacagcagccgg 112707
to top
>emb|AJ277755.1|LPN277755 Legionella pneumophila serogroup 1, 30 kb instable genetic element
          Length = 29223

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  gccatggcgcaggaggaggt 284
            ||||||||||||||||||||
Sbjct: 6890 gccatggcgcaggaggaggt 6871
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>dbj|AK119660.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H12, full
            insert sequence
          Length = 1616

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gcagcaacaacagcagccgg 363
            ||||||||||||||||||||
Sbjct: 1070 gcagcaacaacagcagccgg 1089
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>dbj|AK106726.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H03, full
           insert sequence
          Length = 1693

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 cgccgtcggcggagccgtcg 399
           ||||||||||||||||||||
Sbjct: 264 cgccgtcggcggagccgtcg 245
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 287     acgacgccggcctggcgctg 306
               ||||||||||||||||||||
Sbjct: 2371994 acgacgccggcctggcgctg 2371975
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>dbj|AK060536.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-D02, full
            insert sequence
          Length = 1454

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gcagcaacaacagcagccgg 363
            ||||||||||||||||||||
Sbjct: 1069 gcagcaacaacagcagccgg 1088
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>gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45 of 83 of the complete
              sequence
          Length = 297381

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    gcagcaacaacagcagccgg 363
              ||||||||||||||||||||
Sbjct: 274845 gcagcaacaacagcagccgg 274864
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    acgccggcctggcgctgggc 309
              ||||||||||||||||||||
Sbjct: 509382 acgccggcctggcgctgggc 509363
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>dbj|D87261.1| Oryza sativa (japonica cultivar-group) mRNA for PCF2, complete cds
          Length = 1520

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  gcagcaacaacagcagccgg 363
            ||||||||||||||||||||
Sbjct: 1021 gcagcaacaacagcagccgg 1040


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,696,692
Number of Sequences: 3902068
Number of extensions: 2696692
Number of successful extensions: 83642
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81344
Number of HSP's gapped (non-prelim): 2298
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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