Clone Information

BLAST Search Result

Clone Name	baet119e04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FILA_HUMAN (P20930) Filaggrin	36	0.025
2	T2_MOUSE (Q06666) Octapeptide-repeat protein T2	34	0.095
3	CAC1B_RAT (Q02294) Voltage-dependent N-type calcium channel alph...	33	0.16
4	CAC1B_MOUSE (O55017) Voltage-dependent N-type calcium channel al...	32	0.28
5	GLMM_SILPO (Q5LTP9) Phosphoglucosamine mutase (EC 5.4.2.10)	32	0.28
6	DP13A_MOUSE (Q8K3H0) DCC-interacting protein 13 alpha (Dip13 alp...	32	0.36
7	TRHY_RABIT (P37709) Trichohyalin	31	0.62
8	BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	31	0.62
9	LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-bind...	31	0.62
10	K0853_HUMAN (Q5T200) Protein KIAA0853	31	0.81
11	MYS_PODCA (Q05000) Myosin heavy chain (Fragment)	31	0.81
12	CHEB3_RHOSH (O33558) Chemotaxis response regulator protein-gluta...	31	0.81
13	CHEB1_RHOS4 (Q3J653) Chemotaxis response regulator protein-gluta...	31	0.81
14	NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA p...	30	1.1
15	DP13A_HUMAN (Q9UKG1) DCC-interacting protein 13 alpha (Dip13 alp...	30	1.4
16	SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130 (...	30	1.8
17	TCF20_HUMAN (Q9UGU0) Transcription factor 20 (Stromelysin 1 PDGF...	30	1.8
18	RFC1_YEAST (P38630) Activator 1 95 kDa subunit (Replication fact...	30	1.8
19	BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	29	2.3
20	TNNI_CHLNI (Q7M3Y3) Troponin I (TnI)	29	2.3
21	TF65_HUMAN (Q04206) Transcription factor p65 (Nuclear factor NF-...	29	3.1
22	GLB1_MAIZE (P15590) Globulin-1 S allele precursor (GLB1-S) (7S-l...	29	3.1
23	FILA_MOUSE (P11088) Filaggrin (Fragment)	29	3.1
24	RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro...	28	4.0
25	M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kina...	28	4.0
26	SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD...	28	4.0
27	GCP60_HUMAN (Q9H3P7) Golgi resident protein GCP60 (Acyl-CoA-bind...	28	4.0
28	SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro...	28	4.0
29	RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats pro...	28	4.0
30	RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats prote...	28	4.0
31	CAC1B_DISOM (P56698) Probable voltage-dependent N-type calcium c...	28	4.0
32	JMT_ARATH (Q9AR07) Jasmonate O-methyltransferase (EC 2.1.1.141) ...	28	5.2
33	IKBL_RAT (Q8R2H1) NF-kappa-B inhibitor-like protein 1 (Inhibitor...	28	5.2
34	HES5_MOUSE (P70120) Transcription factor HES-5 (Hairy and enhanc...	28	5.2
35	CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5...	28	5.2
36	NOLB_RHIFR (P33208) Nodulation protein nolB	28	5.2
37	PERQ1_MOUSE (Q99MR1) PERQ amino acid rich with GYF domain protein 1	28	6.8
38	ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in...	28	6.8
39	EFGL_SYNY3 (Q55421) Elongation factor G-like protein	28	6.8
40	PO6F1_HUMAN (Q14863) POU domain, class 6, transcription factor 1...	28	6.8
41	GPNMB_RAT (Q6P7C7) Transmembrane glycoprotein NMB precursor	28	6.8
42	RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-bindin...	28	6.8
43	TRHY_HUMAN (Q07283) Trichohyalin	28	6.8
44	SDC3_CAEEL (P34706) Zinc finger protein sdc-3	28	6.8
45	TLG2_YEAST (Q08144) T-SNARE affecting a late Golgi compartment p...	28	6.8
46	MYO1_SCHPO (Q9Y7Z8) Myosin-1	28	6.8
47	U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliar...	27	8.9
48	CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5...	27	8.9
49	FOXB1_MOUSE (Q64732) Forkhead box protein B1 (Transcription fact...	27	8.9
50	INCE_MOUSE (Q9WU62) Inner centromere protein	27	8.9
51	FOXB1_HUMAN (Q99853) Forkhead box protein B1 (Transcription fact...	27	8.9
52	HEM3_PROAC (Q6AB05) Porphobilinogen deaminase (EC 2.5.1.61) (PBG...	27	8.9
53	RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2	27	8.9
54	MOT6_HUMAN (O15375) Monocarboxylate transporter 6 (MCT 6) (MCT 5)	27	8.9
55	IF2_DECAR (Q47D94) Translation initiation factor IF-2	27	8.9
56	HORN_HUMAN (Q86YZ3) Hornerin	27	8.9
57	AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)	27	8.9
58	IE63_HHV7J (P52355) Transcriptional regulator IE63 homolog	27	8.9

>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
 Frame = -2

Query: 384  ERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLE--- 214
            ER + SR +      + Q + E+    GSRH+  R  EA     +  H  VG GQ     
Sbjct: 1850 ERSDVSRGQSGSRSVSRQTRNEKQSGDGSRHSGSRHHEASSRADSSRHSQVGQGQSSGPR 1909

Query: 213  -VSNRLSALRQNQMLGDHG-DGRRWRARANQ 127
               N+ S++ Q+     H  D  RW   A++
Sbjct: 1910 TSRNQGSSVSQDSDSQGHSEDSERWSGSASR 1940



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
 Frame = -2

Query: 381  RDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSNR 202
            R + SR +      +   + E     GSRH+  R  EA  +     H   G GQ E S  
Sbjct: 879  RSDASRGQSGSRSASRTTRNEEQSRDGSRHSGSRHHEASSHADISRHSQAGQGQSEGSRT 938

Query: 201  -----LSALRQNQMLGDHGDGRRWRARANQ 127
                  S  + +   G   D  RW   A++
Sbjct: 939  SRRQGSSVSQDSDSEGHSEDSERWSGSASR 968



 Score = 31.2 bits (69), Expect = 0.62
 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
 Frame = -2

Query: 351  HXERAGQRQQERLDEA---GSRHARGREEEALLNVVAREHGHVGDGQLE----VSNRLSA 193
            H       +Q R DE    GSRH+  R  EA     +  H  VG GQ E      N  S+
Sbjct: 2507 HSGSRSASRQTRNDEQSGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSS 2566

Query: 192  LRQNQMLGDHG-DGRRWRARANQ 127
              Q+     H  D  RW   A++
Sbjct: 2567 FSQDSDSQGHSEDSERWSGSASR 2589



 Score = 31.2 bits (69), Expect = 0.62
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
 Frame = -2

Query: 381 RDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLE---- 214
           R + S  +      + Q + E     G+RH+  R  EA     +  H  VG GQ      
Sbjct: 554 RSDASHGQSGSRSASRQTRNEEQSGDGTRHSGSRHHEASSQADSSRHSQVGQGQSSGPRT 613

Query: 213 VSNRLSALRQNQMLGDHG-DGRRWRARANQ 127
             N+ S++ Q+     H  D  RW   A++
Sbjct: 614 SRNQGSSVSQDSDSQGHSEDSERWSGSASR 643



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
 Frame = -2

Query: 381  RDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQ----LE 214
            R + SR +      + Q + +     GSRH+     EA     +  H   G GQ      
Sbjct: 3472 RSDASRGQSGSRSASRQTRNDEQSGDGSRHSWSHHHEASTQADSSRHSQSGQGQSAGPRT 3531

Query: 213  VSNRLSALRQNQMLGDHG-DGRRWRARANQ 127
              N+ S++ Q+     H  D  RW   A++
Sbjct: 3532 SRNQGSSVSQDSDSQGHSEDSERWSGSASR 3561

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>T2_MOUSE (Q06666) Octapeptide-repeat protein T2|
          Length = 185

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
 Frame = -2

Query: 387 GERDEPSRERRKHXERAGQRQQERLDE----AGSRHARGREEEALLNVVA-REHGHVGDG 223
           G   E  R+R +  ER  +RQ+ER  E      +   RGRE E      A ++ G    G
Sbjct: 94  GREREAERQRGREAEREAERQRERQRERQRGREAERQRGREAERQRGREAEKQRGERQRG 153

Query: 222 ---QLEVSNRLSALRQNQMLGDHGDGRRWRAR 136
              + E   R   +RQ     + G G+R R R
Sbjct: 154 REVEAEAEGRGRGMRQEAEATEQGQGQRQRQR 185

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>CAC1B_RAT (Q02294) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2336

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -2

Query: 387  GERDEPSRERRKHXERA-GQRQQERLDEAGSRHARGREEEALLNVVAREHGH 235
            G R+E +R RR H + A G   Q R + +   H RG  EEA      R   H
Sbjct: 885  GAREERARPRRSHSKEAPGADTQVRCERSRRHHRRGSPEEATEREPRRHRAH 936

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>CAC1B_MOUSE (O55017) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2327

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 387  GERDEPSRERRKHX-ERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGH 235
            G R+E +R RR H  E  G   Q R + +   H RG  EEA      R   H
Sbjct: 879  GAREERARPRRSHSKETPGADTQVRCERSRRHHRRGSPEEATEREPRRHRAH 930

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>GLMM_SILPO (Q5LTP9) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 448

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 30/100 (30%), Positives = 45/100 (45%)
 Frame = -2

Query: 315 LDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSNRLSALRQNQMLGDHGDGRRWRAR 136
           +D+ G+  A G +  ALL       G +  G L V+  +S L   + LGD G G    A 
Sbjct: 250 IDQLGNV-ADGDQIMALLAARWAAEGRLQGGAL-VATVMSNLGLERFLGDRGIGLERTAV 307

Query: 135 ANQLVXXXXXXXXRSLHHDVGGDQRSHLNWSGFCSLGDGV 16
            ++ V         +L    GG+Q  H+  S F + GDG+
Sbjct: 308 GDRYVVERMREGGFNL----GGEQSGHIVMSDFATTGDGL 343

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>DP13A_MOUSE (Q8K3H0) DCC-interacting protein 13 alpha (Dip13 alpha) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 1)
          Length = 707

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 23/86 (26%), Positives = 40/86 (46%)
 Frame = -2

Query: 396 AVVGERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQL 217
           A+  E D  + E++K  ER  ++QQ+ L +         E+  L+   +R +    +GQL
Sbjct: 625 ALHAELDRRASEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQL 684

Query: 216 EVSNRLSALRQNQMLGDHGDGRRWRA 139
            +S   S+  +   LG+ G  R   A
Sbjct: 685 VLS---SSQSEESDLGEEGKKRESEA 707

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>TRHY_RABIT (P37709) Trichohyalin|
          Length = 1407

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
 Frame = -2

Query: 384  ERDEPSRERRKHXERAGQRQQERLDEAGSRHARG---REEEALLNVVAREHGHVGDGQLE 214
            E  E  RER +      Q  QER +E   R  R    REEE LL    +E     D +  
Sbjct: 946  EEQELRRERARKLREEEQLLQEREEERLRRQERARKLREEEQLLRREEQELRQERDRKFR 1005

Query: 213  VSNRLSALRQNQMLGDHGDGRRWRARANQL 124
               +L   R+ + L      R++R    QL
Sbjct: 1006 EEEQLLQEREEERLRRQERDRKFREEERQL 1035



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = -2

Query: 384 ERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSN 205
           +R+E  + RR+  ER  +  +E   E   R  + REEE LL     E     + + ++  
Sbjct: 573 QREEDEKRRRQERERQYRELEELRQEEQLRDRKLREEEQLLQEREEERLRRQERERKLRE 632

Query: 204 RLSALRQNQ 178
               LRQ +
Sbjct: 633 EEQLLRQEE 641



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = -2

Query: 384 ERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEV-- 211
           E ++  RERR+  ERA Q ++E+L     R  R REE      + RE   + + +  +  
Sbjct: 220 EEEQQRRERREQHERALQEEEEQL----LRQRRWREEPREQQQLRRELEEIREREQRLEQ 275

Query: 210 -SNRLSALRQNQML 172
              R   LR+ Q L
Sbjct: 276 EERREQQLRREQRL 289

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>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 973

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = -2

Query: 402 DDAVVGERDEPSRER-RKHXERAGQRQQERLDEAGSRHARGREEEALLNVVA-REHGHVG 229
           +D V  +RDE  RER R+  ER  +R++E+  E      + +E E   + V  +E G   
Sbjct: 555 EDEVKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEKERDSVKDKEKGKHD 614

Query: 228 DGQLEVSNRLSALR 187
           DG+ + +  +  L+
Sbjct: 615 DGRKKEAEIIKQLK 628

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>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3|
            precursor (LTBP-3)
          Length = 1268

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 8/45 (17%)
 Frame = -1

Query: 205  PAERPPAEPDAWRPRRWSALARSRKPVGLAR--------PWTGPA 95
            PAE  PA+     P RWS   R  K  G +         PW GPA
Sbjct: 1060 PAEYSPAQAQCLIPERWSTPQRDVKCAGASEERTACVWGPWAGPA 1104

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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -2

Query: 399 DAVVGERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEE 271
           D V   RDE +RER +  ER  +R++ER  E      + RE E
Sbjct: 666 DRVDDRRDERARERDRERERDRERERERERERDREREKERELE 708



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 384 ERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEE 271
           ER+   RER +  ER  +R++ER  E      + RE +
Sbjct: 750 EREREERERERERERERERERERERERARERDKERERQ 787

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>MYS_PODCA (Q05000) Myosin heavy chain (Fragment)|
          Length = 692

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 24/75 (32%), Positives = 33/75 (44%)
 Frame = -2

Query: 399 DAVVGERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQ 220
           D  + E+DE     RK+     QRQ E L       +R + E+  L           + Q
Sbjct: 312 DRKLSEKDEELEGLRKNH----QRQMESLQNTIDSESRSKAEQQKLRKKYDADMMELESQ 367

Query: 219 LEVSNRLSALRQNQM 175
           LE SNR++A  Q QM
Sbjct: 368 LESSNRVAAESQKQM 382

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>CHEB3_RHOSH (O33558) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 3 operon (EC 3.1.1.61)
          Length = 369

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
 Frame = +1

Query: 10  LCDAIAERAEAT---------PVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPT-PTI 159
           +CDAI    E T         P+   P +TAD ++ A P   +     +VC  A T  T 
Sbjct: 129 ICDAIRAATETTRRRSQPEPRPLAPGPKLTADEILPARPPRPVPETMPVVCIGASTGGTE 188

Query: 160 AVVSKHLVLPEGAQPV 207
           A+      LP  A P+
Sbjct: 189 ALRDVLTALPASAPPI 204

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>CHEB1_RHOS4 (Q3J653) Chemotaxis response regulator protein-glutamate|
           methylesterase 1 (EC 3.1.1.61)
          Length = 369

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
 Frame = +1

Query: 10  LCDAIAERAEAT---------PVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPT-PTI 159
           +CDAI    E T         P+   P +TAD ++ A P   +     +VC  A T  T 
Sbjct: 129 ICDAIRAATETTRRRSQPEPRPLAPGPKLTADEILPARPPRPVPETMPVVCIGASTGGTE 188

Query: 160 AVVSKHLVLPEGAQPV 207
           A+      LP  A P+
Sbjct: 189 ALRDVLTALPASAPPI 204

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>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H|
            antigen)
          Length = 2115

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = -2

Query: 387  GERDEP-SRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEV 211
            GE+ E  SRE  K   RAG RQ E L+E   R  +    +A L  + RE   +G+ +LE 
Sbjct: 927  GEQQETASRELVKEPARAGDRQPEWLEEQQGR--QFCSTQAALQAMEREAEQMGN-ELER 983

Query: 210  SNRLSALRQNQMLGDHGDGRRWRARANQ 127
                    Q Q   + G   R  AR  Q
Sbjct: 984  LRAALMESQGQQQEERGQQEREVARLTQ 1011

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>DP13A_HUMAN (Q9UKG1) DCC-interacting protein 13 alpha (Dip13 alpha) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 1)
          Length = 709

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/86 (25%), Positives = 40/86 (46%)
 Frame = -2

Query: 396 AVVGERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQL 217
           A+  E D  + E++K  ER  ++QQ+ L++         E+  L+   +R +    +GQ 
Sbjct: 626 ALHAELDRRASEKQKEIERVKEKQQKELNKQKQIEKDLEEQSRLIAASSRPNQASSEGQF 685

Query: 216 EVSNRLSALRQNQMLGDHGDGRRWRA 139
            V +  S+  +   LG+ G  R   A
Sbjct: 686 VVLS--SSQSEESDLGEGGKKRESEA 709

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>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130|
           (Serine-arginine-rich splicing regulatory protein 130)
           (SRrp130) (SR-rich protein) (SR-related protein)
          Length = 805

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -2

Query: 372 PSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQ 220
           PSRERR+   R+  R+  R   + SR  R + ++   N+    H H G+ +
Sbjct: 612 PSRERRRSRSRSRDRRTNRASRSRSRDRR-KIDDQRGNLSGNSHKHKGEAK 661

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>TCF20_HUMAN (Q9UGU0) Transcription factor 20 (Stromelysin 1 PDGF-responsive|
           element-binding protein) (SPRE-binding protein) (Nuclear
           factor SPBP) (AR1)
          Length = 1960

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +1

Query: 97  PAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEGAQPVGDLKLSVSDMPMLS 249
           P+P+ +V+    C+S P+P +    ++L   +G+ P+G     +  MP LS
Sbjct: 370 PSPAASVVQSPSCSSTPSP-LMQTGENLQCGQGSVPMGSRNRILQLMPQLS 419

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>RFC1_YEAST (P38630) Activator 1 95 kDa subunit (Replication factor C subunit|
           1) (Replication factor C1) (Cell division control
           protein 44)
          Length = 861

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
 Frame = -3

Query: 395 RSSGSXTSRPASAGNT-PSARDSDSKSDLTRR-------AVGMPAGVKKRPF*M*WHESM 240
           R + S T +PAS+  T PS++ SDS S++T +       ++ +     K      +  + 
Sbjct: 76  RKASSPTVKPASSKKTKPSSKSSDSASNITAQDVLDKIPSLDLSNVHVKENAKFDFKSAN 135

Query: 239 GMSETDSLRSPTG*APSGRTRCLETTAMVGVGAL 138
             ++ D + S  G  P G+  CL    +V  G L
Sbjct: 136 SNADPDEIVSEIGSFPEGKPNCLLGLTIVFTGVL 169

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>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 984

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -2

Query: 375 EPSRERRKHXERAGQRQQERLDEAGSRHARGREEEA 268
           E  RER K  ++  ++++E  ++   +H  GR++EA
Sbjct: 597 EKEREREKQKQKESEKERESKEKEKGKHEDGRKKEA 632



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 384 ERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEE 271
           ER+   RER +  E+  ++++ER  E      R RE++
Sbjct: 568 ERERERREREREREKEKEKEREREKEKEKEKEREREKQ 605

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>TNNI_CHLNI (Q7M3Y3) Troponin I (TnI)|
          Length = 292

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -2

Query: 384 ERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEA 268
           +R E  R+RR+  +R  Q ++ERL     R  + REEEA
Sbjct: 90  QRQEEERQRREEEQRRQQEEEERL--RLEREEQEREEEA 126

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>TF65_HUMAN (Q04206) Transcription factor p65 (Nuclear factor NF-kappa-B p65|
           subunit)
          Length = 551

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 94  APAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEGAQP 204
           APAP+ A+++ L  A AP P +A      V P   +P
Sbjct: 392 APAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKP 428

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>GLB1_MAIZE (P15590) Globulin-1 S allele precursor (GLB1-S) (7S-like)|
          Length = 573

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = -2

Query: 384 ERDEPSRERRK----HXERAGQRQQERLDEAGS-RHARGREEE 271
           E++E  RE R       ER G+ ++E+ +E    RH RGR EE
Sbjct: 518 EQEEEEREERHGGRGERERHGREEREKEEEEREGRHGRGRREE 560

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>FILA_MOUSE (P11088) Filaggrin (Fragment)|
          Length = 336

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/73 (28%), Positives = 28/73 (38%)
 Frame = -2

Query: 387 GERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVS 208
           G+R E    R +H       Q+   +E+ S+H  G + E       R H H    Q E  
Sbjct: 135 GQRHEQRSSRGQHGSGYYYEQEHSEEESDSQHQHGHQHEQ-----QRGHQHQHQHQHEHE 189

Query: 207 NRLSALRQNQMLG 169
              S  RQ Q  G
Sbjct: 190 QPESGHRQQQSSG 202

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>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -2

Query: 381  RDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHV 232
            R+E  RE+ K  ER  +R++ER  E  ++ +    E  L +      GH+
Sbjct: 1179 REEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHM 1228

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>M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kinase kinase 4|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK
           kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK)
           (Nck-interacting kinase)
          Length = 1233

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
 Frame = -2

Query: 381 RDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSNR 202
           R++  + R +  ER  + ++ER      +    RE+E +   +  E  H     LE+  +
Sbjct: 429 REQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRH-----LEILQQ 483

Query: 201 LSALRQNQMLGDHGDGRRWRARANQLVXXXXXXXXRSLH------HDVGGDQRSHLNWSG 40
                Q  +L DH   RR  A+              S H      H    D+   + WS 
Sbjct: 484 QLLQEQAMLLHDH---RRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVQWSH 540

Query: 39  FCSLGDGVT 13
             SL + V+
Sbjct: 541 LASLKNNVS 549

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>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding|
            SR-like protein RA4) (Fragment)
          Length = 1048

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 384  ERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREE 274
            ERD  +RERR+   R+ +R + R  E  SR + G  +
Sbjct: 924  ERDNSNRERREWGRRSPERDRHRDLEERSRRSSGHRD 960

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>GCP60_HUMAN (Q9H3P7) Golgi resident protein GCP60 (Acyl-CoA-binding|
           domain-containing protein 3) (Golgi phosphoprotein 1)
           (GOLPH1) (Golgi complex-associated protein 1) (GOCAP1)
           (PBR- and PKA-associated protein 7) (Peripherial
           benzodiazepine receptor-asso
          Length = 527

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = -2

Query: 384 ERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSN 205
           E++E  ++R++  ER  + ++ER         R REEE  L     E   + + +L +  
Sbjct: 181 EKEEQEKKRKEEEERRRREEEERERLQKEEEKRRREEEERLRREEEERRRIEEERLRLEQ 240

Query: 204 R 202
           +
Sbjct: 241 Q 241

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>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3223

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
 Frame = -2

Query: 387  GERDEPSRERRKHXERAGQRQQERLDEAGSRH-ARGREEEALLNVVARE----------H 241
            G+        R+   R G   +  L  AG R   RG  + A + +  R            
Sbjct: 1996 GQEPAAGASPRRGELRRGSSAESALPRAGPRELGRGLHKAASVELPQRRSPGPGATRLAR 2055

Query: 240  GHVGDGQLEVSNRLSALRQNQMLGDHGDGR 151
            G +G+G  E + RL ALRQ  + G   DG+
Sbjct: 2056 GGLGEG--EYAQRLQALRQRLLRGGPEDGK 2083



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 202 AERPPAEPDAWRPRRWSALARSRKPVGLARPWTGPAQ 92
           A +PP+   A +P       RSR P G   P  GP Q
Sbjct: 552 AAQPPSPSSAEKPGDEPGRPRSRGPAGRTEPGEGPQQ 588

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>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-2)
          Length = 1558

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -2

Query: 381  RDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHV 232
            R+E  RE+ K  ER  +R++ER  E  ++ +    E  L +      GH+
Sbjct: 1171 REEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHM 1220

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>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-related protein)
          Length = 1559

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 381  RDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLN 259
            R+E  RE+ K  ER  +R++ER  E  ++ A     E  L+
Sbjct: 1171 REEREREKEKEKEREREREREREAERAAQKASSSAHEGRLS 1211

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>CAC1B_DISOM (P56698) Probable voltage-dependent N-type calcium channel alpha-1B|
            subunit (Voltage-gated calcium channel alpha subunit
            Cav2.2) (DOE-4)
          Length = 2326

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
 Frame = -2

Query: 378  DEPSRERRKH-XERAGQRQQERLDEA--GSRHAR--------GREEEALLNVVAREH 241
            D P RE R+H   R G  QQ R      G RH+R        GRE EA    V+R H
Sbjct: 921  DAPEREHRRHRSHRHGTEQQHREANGTKGERHSRAKDGSRSGGREGEA----VSRSH 973

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>JMT_ARATH (Q9AR07) Jasmonate O-methyltransferase (EC 2.1.1.141)|
           (S-adenosyl-L-methionine:jasmonic acid carboxyl
           methyltransferase)
          Length = 389

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
 Frame = +1

Query: 127 LVCASAPTPTIAVVSK----HLVLPEGAQPVGDLKLSVSDMPMLSCHYI 261
           L C+S P   +++ +     H + P+  +PV +L++S++D+P    +YI
Sbjct: 58  LGCSSGPNSLLSISNIVDTIHNLCPDLDRPVPELRVSLNDLPSNDFNYI 106

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>IKBL_RAT (Q8R2H1) NF-kappa-B inhibitor-like protein 1 (Inhibitor of kappa|
           B-like) (I-kappa-B-like) (IkappaBL) (Nuclear factor of
           kappa light polypeptide gene enhancer in B-cells
           inhibitor-like 1)
          Length = 381

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = -2

Query: 381 RDEPSRERRKHXERAGQRQQERLDEAGSRHA-RGREEEALLNVVAREHGHVGDGQLEVSN 205
           R+   ++RR+  E  G R+  R +  GS H+ R +EEE  L    RE   V + +L  S 
Sbjct: 207 REHAQKQRRQQLEAEGSRRPPRAE--GSSHSWRQQEEEQRL---FRERARVKEKELCESR 261

Query: 204 RLSALRQNQMLGDHG 160
              A R  +  GD G
Sbjct: 262 ---ARRAQEAQGDRG 273

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>HES5_MOUSE (P70120) Transcription factor HES-5 (Hairy and enhancer of split 5)|
          Length = 167

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 7/40 (17%)
 Frame = -1

Query: 205 PAERPPAEPDAWRPRRWS------ALARSRKPV-GLARPW 107
           PA+ PPA   A +P R S      A++ SR+P  GL RPW
Sbjct: 128 PAKEPPAPGAAPQPARSSAKAAAAAVSTSRQPACGLWRPW 167

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>CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5) (Cholinesterase-related
           cell division controller)
          Length = 1512

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 369 SRER-RKHXERAGQRQQERLDEAGSRHARGREEEA 268
           S+ER R+H  R GQR      ++ SRH+   EE A
Sbjct: 209 SKERHREHRRRDGQRGGSEASKSRSRHSHSGEERA 243

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>NOLB_RHIFR (P33208) Nodulation protein nolB|
          Length = 164

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = +1

Query: 16  DAIAERAEATPVKMAPLITADVVVEAAP-APSMAVLNQLVCASAPTPTIAVVSKH--LVL 186
           D++     +TPV+ AP+     V  AAP +P    + Q + A  P   +A  + +    L
Sbjct: 35  DSMKNDTASTPVRTAPISPPMDVHRAAPTSPLKDRVLQTISAICPDSIVAAAAPNHKAAL 94

Query: 187 PEGAQPVGDLKLSVSD 234
             GA P    KL V D
Sbjct: 95  ISGAPPGPSQKLPVED 110

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>PERQ1_MOUSE (Q99MR1) PERQ amino acid rich with GYF domain protein 1|
          Length = 1011

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
 Frame = -2

Query: 384 ERDEPSRERRKHXERAGQRQQE-----RLDEAGSRHARGREEEALLNVVARE 244
           +R+E  R+RR+   R  Q+QQE     + +E   R  + R++E LL ++ ++
Sbjct: 662 KREEEERKRREEKRRQQQQQQEEQKRRQEEEELFRRKQVRQQELLLKLLQQQ 713

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>ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in the nucleus|
            (Acinus)
          Length = 1338

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 384  ERDEPSRERRKHXERAGQRQQERLDEAGSRHARGR 280
            ERD   RER +  +R   R+++R D    RH+R R
Sbjct: 1293 ERDRGDRERERERDRDRGRERDRRDT--KRHSRSR 1325

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>EFGL_SYNY3 (Q55421) Elongation factor G-like protein|
          Length = 669

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 76  DVVVEAAPAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEG 195
           DV+++ AP PS+    + +      P IA V K    P+G
Sbjct: 269 DVLIKEAPDPSVTAARRSLSTDGSGPVIAQVLKTYFTPQG 308

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>PO6F1_HUMAN (Q14863) POU domain, class 6, transcription factor 1 (mPOU homeobox|
           protein) (Brain-specific homeobox/POU domain protein 5)
           (Brain-5) (Brn-5 protein)
          Length = 301

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = +1

Query: 31  RAEATPVKMAPLITADVVVEAAPA----PSMAVLNQLVCASAPTPTIAVVSKH 177
           ++E  P++  P +    VV A+PA    PS +    + C+  PT +  V   H
Sbjct: 81  KSEVQPIQPTPTVPQPAVVIASPAPAAKPSASAPIPITCSETPTVSQLVSKPH 133

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>GPNMB_RAT (Q6P7C7) Transmembrane glycoprotein NMB precursor|
          Length = 572

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = +1

Query: 94  APAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEGAQPVGDLKLSVSDMPMLSCHYIQKGL 273
           +P PS +       AS+P+PT++  S  L+      P G   + +SD+   +C   + G 
Sbjct: 325 SPTPSPSSSTSPSPASSPSPTLSTPSPSLM------PTGHKSMELSDISNENCRINRYGY 378

Query: 274 F 276
           F
Sbjct: 379 F 379

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>RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-binding motif protein|
           25) (RNA-binding region-containing protein 7) (Protein
           S164)
          Length = 784

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 375 EPSRERRKHXERAGQRQQERLDEAGSRHARGREEE 271
           E  RER +  ER  +R++ER  E      R REE+
Sbjct: 343 EREREREREREREREREREREREREKDKKRDREED 377



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 375 EPSRERRKHXERAGQRQQERLDEAGSRHARGREEE 271
           E  RER +  ER  +R++ER  E   +  R  +EE
Sbjct: 345 EREREREREREREREREREREREKDKKRDREEDEE 379

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>TRHY_HUMAN (Q07283) Trichohyalin|
          Length = 1898

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 381  RDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALL 262
            R+E  + RR+  ER    ++++L +   RH + REEE LL
Sbjct: 1389 REEEQQVRRQERERKFLEEEQQLRQ--ERHRKFREEEQLL 1426



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 11/59 (18%)
 Frame = -2

Query: 384 ERDEPSRERR-----------KHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREH 241
           +R+EP  ERR           +  E+  + QQER ++   R  R  EEE L   + REH
Sbjct: 640 KREEPEEERRHELLKSEEQEERRHEQLRREQQERREQ---RLKREEEEERLEQRLKREH 695

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>SDC3_CAEEL (P34706) Zinc finger protein sdc-3|
          Length = 2150

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 384  ERDEPSRERRKHXERAGQR-QQERLDEAGSRHARGRE--EEALLNVVARE 244
            +RD+  RE+  H  RA QR Q+E+ +E   R   G E  +E+LL  +  E
Sbjct: 867  KRDKEKREKEWHEMRAAQRAQKEKEEEDQRRMDMGIEHGQESLLKSITPE 916

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>TLG2_YEAST (Q08144) T-SNARE affecting a late Golgi compartment protein 2|
           (Syntaxin TLG2)
          Length = 397

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
 Frame = -2

Query: 384 ERDEPSRERRK------HXERAGQRQQERLDEAGSRHARGREEE 271
           E +E +RE+R+      + +R  QRQQ+  D +   + R R+EE
Sbjct: 210 EEEEAAREKREGLDIEDYSKRTLQRQQQLHDTSAEAYLRERDEE 253

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>MYO1_SCHPO (Q9Y7Z8) Myosin-1|
          Length = 1217

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
 Frame = +1

Query: 34   AEATPVKMA-PLITADVVVEAAPAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEGAQPVG 210
            A++ P  MA P+ TA       PAP+M        A+AP  +     K       ++P  
Sbjct: 1005 AKSKPAPMANPVSTAQQTQNRPPAPAMQARPNTTQAAAPVTSTTTTIKQATTVSASKPAP 1064

Query: 211  DLKLSVSDMP 240
                S +  P
Sbjct: 1065 STVTSAASSP 1074

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>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2) (NY-REN-20 antigen)
          Length = 482

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
 Frame = -2

Query: 384 ERDEPSRERRKHXERA------GQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDG 223
           E++E +++R++  ER        Q+++ER +E   R  +  +EEAL  ++ +    + +G
Sbjct: 91  EKEEAAKKRQEEQERKLKEQWEEQQRKEREEEEQKRQEKKEKEEALQKMLDQAENELENG 150

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>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5)
          Length = 1511

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -2

Query: 369 SRER-RKHXERAGQRQQERLDEAGSRHARGREEEA 268
           S+ER R+H  R G R      +A SRH    EE A
Sbjct: 209 SKERHREHRRRDGTRSGSEASKARSRHGHSGEERA 243

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>FOXB1_MOUSE (Q64732) Forkhead box protein B1 (Transcription factor FKH-5)|
          Length = 325

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +1

Query: 10  LCDAIAERAEATPVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPTPTIAVVSK 174
           LC A  +   A PV + P   A   + A PAP   +L+    + +PT +    S+
Sbjct: 248 LCHAAGQTLPAIPVPIKPTPAAVPALPALPAPIPTLLSNSPPSLSPTSSQTATSQ 302

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>INCE_MOUSE (Q9WU62) Inner centromere protein|
          Length = 880

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -2

Query: 381 RDEPSRERRKHXER---AGQRQQERLDEAGSRHARGREEE 271
           + E  +ERRK  E    A QR+QER  E   R    RE+E
Sbjct: 641 KKEEEQERRKAAEARRLAEQREQERRREQERREQERREQE 680

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>FOXB1_HUMAN (Q99853) Forkhead box protein B1 (Transcription factor FKH-5)|
          Length = 324

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +1

Query: 10  LCDAIAERAEATPVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPTPTIAVVSK 174
           LC A  +   A PV + P   A   + A PAP   +L+    + +PT +    S+
Sbjct: 247 LCHAAGQTLPAIPVPIKPTPAAVPALPALPAPIPTLLSNSPPSLSPTSSQTATSQ 301

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>HEM3_PROAC (Q6AB05) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 334

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
 Frame = +1

Query: 22  IAERAEATPV--KMAPLITADVVVEAAPAP-------SMAVLNQLVCASAPTPTIAVVSK 174
           I   A+  PV  K   ++T DVVV A           S+ +  ++  A A   T+ V + 
Sbjct: 254 IGALAQLKPVSGKSLQVLTLDVVVAAVDGSRTVREQVSVELPAEVEPALAAAHTLGVTAA 313

Query: 175 HLVLPEGAQPVGDLKLSVS 231
             +L +GA  V DLK S S
Sbjct: 314 EELLDDGAADVADLKASGS 332

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>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 19/107 (17%)
 Frame = -2

Query: 396 AVVGERDEPSRERRKHXERAGQRQQERL------------DEAGSRHARGREEEALLNVV 253
           A V E+ +  R  RKH  +  +R Q+              D   S HAR  + E      
Sbjct: 190 ATVKEKKD-ERASRKHSSKTSERAQKSEHRESKKSHSGSPDGRSSYHARAEDPECKARKE 248

Query: 252 AREHGHVGDGQLEVSNRLSALRQNQMLG-------DHGDGRRWRARA 133
             +H H    + E   +     + +  G        H DGR  R+R+
Sbjct: 249 KPKHEHKSASRREAEEKSRERERGRSSGTHSGRHRGHSDGRSHRSRS 295

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>MOT6_HUMAN (O15375) Monocarboxylate transporter 6 (MCT 6) (MCT 5)|
          Length = 505

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +1

Query: 19  AIAERAEATPVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPTPTIAVVSKHL 180
           A+ ++ +      A  +  D+ +EA   P      +++C S+  P  A V+KHL
Sbjct: 418 ALQKKEQGKQAVAADALERDLFLEAKDGPGKQRSPEIMCQSSRQPRPAGVNKHL 471

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>IF2_DECAR (Q47D94) Translation initiation factor IF-2|
          Length = 904

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +1

Query: 58  APLITADVVVEAAPAPSMAVLNQLVCASAPTPTIAV---VSKHLVLPEGAQPVGDLKLSV 228
           AP +  + VVE  P P + V+ + V    P P +     V    V+ E A PV   + S+
Sbjct: 120 APEVIPEPVVEVVPEPVIEVVPEPVVEIVPEPVVEAPVEVPVEEVVLEKAAPVAPTRASI 179

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>HORN_HUMAN (Q86YZ3) Hornerin|
          Length = 2850

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 29/128 (22%), Positives = 35/128 (27%)
 Frame = -2

Query: 387  GERDEPSRERRKHXERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVS 208
            G     S    +H   +GQ       E+ S HA GR      +  +  HG  G G     
Sbjct: 845  GSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGS---- 900

Query: 207  NRLSALRQNQMLGDHGDGRRWRARANQLVXXXXXXXXRSLHHDVGGDQRSHLNWSGFCSL 28
                   Q+   G HG G                    S  H  G  Q S          
Sbjct: 901  ------GQSPSYGRHGSG--------------SGRSSSSGRHGSGSGQSSGFGHKSSSGQ 940

Query: 27   GDGVTQDG 4
              G TQ G
Sbjct: 941  SSGYTQHG 948

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>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)|
          Length = 926

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 25  AERAEATPVKMAPLITADVVVEAA-PAPSMAVLNQLVCASAPTPTIA 162
           A  A  T +++AP  +A V   A+ PAP+ A       ASAPTPT A
Sbjct: 805 AAAAATTAIQVAPATSAPVPSPASIPAPATAQ------ASAPTPTQA 845

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>IE63_HHV7J (P52355) Transcriptional regulator IE63 homolog|
          Length = 526

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 146 QRRPSPWSPSIWFC 187
           QR  SPW PS++FC
Sbjct: 356 QRMMSPWKPSLYFC 369


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,036,580
Number of Sequences: 219361
Number of extensions: 880904
Number of successful extensions: 3966
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 3598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3922
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result