ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet119e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit... 466 e-128
2gb|AY103687.1| Zea mays PCO106710 mRNA sequence 276 3e-71
3ref|NM_184976.1| Oryza sativa (japonica cultivar-group), mRNA 262 5e-67
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 262 5e-67
5gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 geno... 262 5e-67
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 262 5e-67
7dbj|AK060493.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 5e-67
8dbj|AK059890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 5e-67
9gb|AF093634.1|AF093634 Oryza sativa photosystem-1 F subunit prec... 254 1e-64
10dbj|AK069791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 3e-37
11gb|AF139468.2|AF139468 Vigna radiata photosystem I reaction cent... 80 4e-12
12gb|DQ122913.1| Chlamydomonas incerta chloroplast photosystem I s... 48 0.013
13emb|AL611927.21| Mouse DNA sequence from clone RP23-445E20 on ch... 46 0.053
14gb|AC103360.9| Mus musculus chromosome 8, clone RP24-414A22, com... 44 0.21
15gb|AC146607.2| Mus musculus BAC clone RP23-209N19 from chromosom... 44 0.21
16gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome... 44 0.21
17gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, comple... 44 0.21
18gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, com... 44 0.21
19gb|AC020612.40| Homo sapiens 12 BAC RP11-133N21 (Roswell Park Ca... 44 0.21
20gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 0.83
21gb|AC147676.10| Canis Familiaris, clone XX-25H12, complete sequence 42 0.83
22gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 0.83
23emb|CR352233.9| Zebrafish DNA sequence from clone CH211-193J5 in... 42 0.83
24emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 0.83
25emb|BX663511.8| Zebrafish DNA sequence from clone RP71-20D11 in ... 42 0.83
26gb|AC087485.6| Homo sapiens chromosome 15, clone RP11-570N16, co... 42 0.83
27gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 0.83
28gb|AC136896.6| Homo sapiens chromosome 15, clone RP11-860O1, com... 42 0.83
29gb|AC135350.6| Homo sapiens chromosome 15, clone RP13-946E15, co... 42 0.83
30dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 0.83
31gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromoso... 42 0.83
32gb|BC043542.1| Homo sapiens patched homolog (Drosophila), mRNA (... 40 3.3
33ref|NM_185531.2| Oryza sativa (japonica cultivar-group), mRNA 40 3.3
34ref|XM_478588.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.3
35gb|AF175325.1| Homo sapiens eukaryotic initiation factor 4AI (EI... 40 3.3
36ref|XM_359774.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 3.3
37gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.3
38ref|XM_323604.1| Neurospora crassa OR74A related to beta-fructof... 40 3.3
39ref|XM_956163.1| Neurospora crassa OR74A related to beta-fructof... 40 3.3
40gb|AE009291.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 3.3
41gb|AE008321.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 3.3
42gb|BC006881.1| Mus musculus solute carrier family 35, member B3,... 40 3.3
43ref|XM_843923.1| PREDICTED: Canis familiaris similar to hairy an... 40 3.3
44gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 40 3.3
45ref|XM_542055.2| PREDICTED: Canis familiaris similar to zinc fin... 40 3.3
46ref|XM_848511.1| PREDICTED: Canis familiaris similar to zinc fin... 40 3.3
47gb|BC032613.1| Homo sapiens cDNA clone IMAGE:5555330, **** WARNI... 40 3.3
48gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, comple... 40 3.3
49emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chr... 40 3.3
50emb|X13495.1|CRPSAF C.reinhardtii mRNA for 17 kd P21 protein of ... 40 3.3
51gb|DQ123986.1| Coffea arabica x Coffea canephora clone HT-SSH4-E... 40 3.3
52emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genom... 40 3.3
53emb|AL513462.1|NCB8L3 Neurospora crassa DNA linkage group V BAC ... 40 3.3
54emb|CR388137.8| Zebrafish DNA sequence from clone DKEY-17M13 in ... 40 3.3
55gb|AC100748.2| Homo sapiens chromosome 17, clone CTD-2231E3, com... 40 3.3
56gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 3.3
57dbj|AK167051.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 40 3.3
58dbj|AK077208.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 3.3
59dbj|AK079504.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 3.3
60dbj|AK076592.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 3.3
61dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
62dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
63gb|AC024255.22|AC024255 Homo sapiens 12 BAC RP11-31A23 (Roswell ... 40 3.3
64dbj|AB198072.1| Bos taurus TPM3 mRNA for tropomyosin 3, complete... 40 3.3
65ref|NM_134060.2| Mus musculus solute carrier family 35, member B... 40 3.3
66dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
67dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
68dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 3.3
69dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
70dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
71dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
72dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.3
73emb|AJ338797.1|HSA338797 Homo sapiens genomic sequence surroundi... 40 3.3
74emb|AJ339124.1|HSA339124 Homo sapiens genomic sequence surroundi... 40 3.3
75emb|AJ340425.1|HSA340425 Homo sapiens genomic sequence surroundi... 40 3.3
76emb|AJ340397.1|HSA340397 Homo sapiens genomic sequence surroundi... 40 3.3
77emb|AJ338925.1|HSA338925 Homo sapiens genomic sequence surroundi... 40 3.3
78emb|AJ338981.1|HSA338981 Homo sapiens genomic sequence surroundi... 40 3.3
79dbj|AK100722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.3
80dbj|AK070656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.3
81gb|AF135791.1|AF135791 Chlamydomonas reinhardtii photosystem I s... 40 3.3
82ref|NM_001011674.1| Bos taurus tropomyosin 3 (TPM3), mRNA 40 3.3
83emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 3.3
84gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete seq... 40 3.3
85dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 3.3
86emb|AJ342453.1|HSA342453 Homo sapiens genomic sequence surroundi... 40 3.3
87emb|AJ342377.1|HSA342377 Homo sapiens genomic sequence surroundi... 40 3.3
88gb|M77812.1|RABMHCP Rabbit myosin heavy chain mRNA, complete cds 40 3.3
89gb|AC016876.10| Homo sapiens chromosome 17, clone RP11-186B7, co... 40 3.3
90dbj|AB023819.1| Oryza sativa (indica cultivar-group) osnas3 mRNA... 40 3.3 
>gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit precursor mRNA,
           complete cds
          Length = 990

 Score =  466 bits (235), Expect = e-128
 Identities = 244/247 (98%)
 Strand = Plus / Plus

                                                                       
Query: 7   catcaagaccttctaggccgcgctggcgctctcctccgagctcctctcctcggccgccac 66
           |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 199 catcaagaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccac 258

                                                                       
Query: 67  ctccccgccccccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggc 126
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 259 ctccccgccccccgcggccgccgacatcgccggcctgaccccctgcaaggagtccaaggc 318

                                                                       
Query: 127 cttcgccaagcgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgc 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttcgccaagcgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgc 378

                                                                       
Query: 187 gcccgactccgccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggtt 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcccgactccgccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggtt 438

                  
Query: 247 cgagaac 253
           |||||||
Sbjct: 439 cgagaac 445
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>gb|AY103687.1| Zea mays PCO106710 mRNA sequence
          Length = 1242

 Score =  276 bits (139), Expect = 3e-71
 Identities = 217/243 (89%)
 Strand = Plus / Plus

                                                                       
Query: 11  aagaccttctaggccgcgctggcgctctcctccgagctcctctcctcggccgccacctcc 70
           ||||| |||| |||||||||||| || || || | ||| |||||||||||||||||||||
Sbjct: 241 aagacgttctcggccgcgctggctctgtcgtcggtgcttctctcctcggccgccacctcc 300

                                                                       
Query: 71  ccgccccccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttc 130
           || |||||||||||||| |||||||| || |||||||||||||||||||||||||| |||
Sbjct: 301 cctccccccgcggccgctgacatcgcggggctgaccccgtgcaaggagtccaaggcgttc 360

                                                                       
Query: 131 gccaagcgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgccc 190
           |||||||| |||||| | ||| |||||||||||| | |||||||||||||||||||||||
Sbjct: 361 gccaagcgcgagaagaactcgatcaagaagctcaccgcgtcgctcaagaagtacgcgccc 420

                                                                       
Query: 191 gactccgccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgag 250
           |||  ||||||||| ||||||||| | ||||||||||| ||||||||||| |||||||||
Sbjct: 421 gacagcgccccggccctcgccatcaacgccaccatcgagaagaccaagcggcggttcgag 480

              
Query: 251 aac 253
           |||
Sbjct: 481 aac 483
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>ref|NM_184976.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score =  262 bits (132), Expect = 5e-67
 Identities = 204/228 (89%)
 Strand = Plus / Plus

                                                                       
Query: 26  gcgctggcgctctcctccgagctcctctcctcggccgccacctccccgccccccgcggcc 85
           ||||||||||| ||||| | ||| ||||||||||| || || || ||||||||||| |||
Sbjct: 241 gcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccccccgccgcc 300

                                                                       
Query: 86  gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
           |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 301 gccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaagcgggagaag 360

                                                                       
Query: 146 cagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactccgccccggcg 205
           |||||  ||||||||||| | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 361 cagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactccgcgccggcg 420

                                                           
Query: 206 ctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaac 253
           ||||||||| | ||||||||||| ||||| |||||||| |||||||||
Sbjct: 421 ctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaac 468
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  262 bits (132), Expect = 5e-67
 Identities = 204/228 (89%)
 Strand = Plus / Minus

                                                                            
Query: 26       gcgctggcgctctcctccgagctcctctcctcggccgccacctccccgccccccgcggcc 85
                ||||||||||| ||||| | ||| ||||||||||| || || || ||||||||||| |||
Sbjct: 31970011 gcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccccccgccgcc 31969952

                                                                            
Query: 86       gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
                |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 31969951 gccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaagcgggagaag 31969892

                                                                            
Query: 146      cagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactccgccccggcg 205
                |||||  ||||||||||| | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 31969891 cagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactccgcgccggcg 31969832

                                                                
Query: 206      ctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaac 253
                ||||||||| | ||||||||||| ||||| |||||||| |||||||||
Sbjct: 31969831 ctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaac 31969784
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>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete
             sequence
          Length = 144306

 Score =  262 bits (132), Expect = 5e-67
 Identities = 204/228 (89%)
 Strand = Plus / Minus

                                                                         
Query: 26    gcgctggcgctctcctccgagctcctctcctcggccgccacctccccgccccccgcggcc 85
             ||||||||||| ||||| | ||| ||||||||||| || || || ||||||||||| |||
Sbjct: 61963 gcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccccccgccgcc 61904

                                                                         
Query: 86    gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
             |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 61903 gccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaagcgggagaag 61844

                                                                         
Query: 146   cagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactccgccccggcg 205
             |||||  ||||||||||| | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 61843 cagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactccgcgccggcg 61784

                                                             
Query: 206   ctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaac 253
             ||||||||| | ||||||||||| ||||| |||||||| |||||||||
Sbjct: 61783 ctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaac 61736
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  262 bits (132), Expect = 5e-67
 Identities = 204/228 (89%)
 Strand = Plus / Minus

                                                                            
Query: 26       gcgctggcgctctcctccgagctcctctcctcggccgccacctccccgccccccgcggcc 85
                ||||||||||| ||||| | ||| ||||||||||| || || || ||||||||||| |||
Sbjct: 32060523 gcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccccccgccgcc 32060464

                                                                            
Query: 86       gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
                |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 32060463 gccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaagcgggagaag 32060404

                                                                            
Query: 146      cagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactccgccccggcg 205
                |||||  ||||||||||| | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 32060403 cagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactccgcgccggcg 32060344

                                                                
Query: 206      ctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaac 253
                ||||||||| | ||||||||||| ||||| |||||||| |||||||||
Sbjct: 32060343 ctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaac 32060296
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>dbj|AK060493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-D02, full
           insert sequence
          Length = 997

 Score =  262 bits (132), Expect = 5e-67
 Identities = 204/228 (89%)
 Strand = Plus / Plus

                                                                       
Query: 26  gcgctggcgctctcctccgagctcctctcctcggccgccacctccccgccccccgcggcc 85
           ||||||||||| ||||| | ||| ||||||||||| || || || ||||||||||| |||
Sbjct: 240 gcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccccccgccgcc 299

                                                                       
Query: 86  gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
           |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 300 gccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaagcgggagaag 359

                                                                       
Query: 146 cagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactccgccccggcg 205
           |||||  ||||||||||| | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 360 cagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactccgcgccggcg 419

                                                           
Query: 206 ctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaac 253
           ||||||||| | ||||||||||| ||||| |||||||| |||||||||
Sbjct: 420 ctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaac 467
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>dbj|AK059890.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C12, full
           insert sequence
          Length = 990

 Score =  262 bits (132), Expect = 5e-67
 Identities = 204/228 (89%)
 Strand = Plus / Plus

                                                                       
Query: 26  gcgctggcgctctcctccgagctcctctcctcggccgccacctccccgccccccgcggcc 85
           ||||||||||| ||||| | ||| ||||||||||| || || || ||||||||||| |||
Sbjct: 228 gcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccccccgccgcc 287

                                                                       
Query: 86  gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
           |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 288 gccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaagcgggagaag 347

                                                                       
Query: 146 cagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactccgccccggcg 205
           |||||  ||||||||||| | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 348 cagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactccgcgccggcg 407

                                                           
Query: 206 ctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaac 253
           ||||||||| | ||||||||||| ||||| |||||||| |||||||||
Sbjct: 408 ctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaac 455
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>gb|AF093634.1|AF093634 Oryza sativa photosystem-1 F subunit precursor (PSI-F) mRNA,
           complete cds
          Length = 996

 Score =  254 bits (128), Expect = 1e-64
 Identities = 203/228 (89%)
 Strand = Plus / Plus

                                                                       
Query: 26  gcgctggcgctctcctccgagctcctctcctcggccgccacctccccgccccccgcggcc 85
           ||||||||||| ||||| | ||| ||||||||||| || || || ||| ||||||| |||
Sbjct: 221 gcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgtcccccgccgcc 280

                                                                       
Query: 86  gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
           |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 281 gccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaagcgggagaag 340

                                                                       
Query: 146 cagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactccgccccggcg 205
           |||||  ||||||||||| | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 341 cagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactccgcgccggcg 400

                                                           
Query: 206 ctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaac 253
           ||||||||| | ||||||||||| ||||| |||||||| |||||||||
Sbjct: 401 ctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaac 448
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>dbj|AK069791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031N02, full
           insert sequence
          Length = 967

 Score =  163 bits (82), Expect = 3e-37
 Identities = 133/150 (88%)
 Strand = Plus / Plus

                                                                       
Query: 26  gcgctggcgctctcctccgagctcctctcctcggccgccacctccccgccccccgcggcc 85
           ||||||||||| ||||| | ||| ||||||||||| || || || ||||||||||| |||
Sbjct: 238 gcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccccccgccgcc 297

                                                                       
Query: 86  gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
           |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 298 gccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaagcgggagaag 357

                                         
Query: 146 cagtcggtcaagaagctcaactcgtcgctc 175
           |||||  ||||||||||| | |||||||||
Sbjct: 358 cagtccatcaagaagctccagtcgtcgctc 387



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 204 cgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaac 253
           ||||||||||| | ||||||||||| ||||| |||||||| |||||||||
Sbjct: 383 cgctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaac 432
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>gb|AF139468.2|AF139468 Vigna radiata photosystem I reaction center subunit III (CipPsaF)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 885

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 71  ccgccccccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttc 130
           |||| |||||| | ||| |||||| |||| ||||||||||||||||||||||||   |||
Sbjct: 266 ccgctccccgccgtcgcggacatctccggtctgaccccgtgcaaggagtccaagcagttc 325

                                           
Query: 131 gccaagcgggagaagcagtcggtcaagaagct 162
           || ||||| |||||||||||| | ||||||||
Sbjct: 326 gcaaagcgcgagaagcagtcgataaagaagct 357
to top
>gb|DQ122913.1| Chlamydomonas incerta chloroplast photosystem I subunit F (PsaF)
           mRNA, partial cds; nuclear gene for chloroplast product
          Length = 1200

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
           ||||||||||| ||||||||||| |||   |||  |||||||| |||||||| |||||||
Sbjct: 148 gccgacatcgcgggcctgaccccctgctccgagagcaaggcctacgccaagctggagaag 207
to top
>emb|AL611927.21| Mouse DNA sequence from clone RP23-445E20 on chromosome 4, complete
             sequence
          Length = 111802

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 58    ggccgccacctccccgccccccgcggccgcc 88
             |||||||  ||||||||||||||||||||||
Sbjct: 88236 ggccgccggctccccgccccccgcggccgcc 88266
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>gb|AC103360.9| Mus musculus chromosome 8, clone RP24-414A22, complete sequence
          Length = 172618

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 66     cctccccgccccccgcggccgc 87
              ||||||||||||||||||||||
Sbjct: 162773 cctccccgccccccgcggccgc 162752
to top
>gb|AC146607.2| Mus musculus BAC clone RP23-209N19 from chromosome 3, complete sequence
          Length = 173758

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 66     cctccccgccccccgcggccgc 87
              ||||||||||||||||||||||
Sbjct: 148672 cctccccgccccccgcggccgc 148693
to top
>gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome 3, complete sequence
          Length = 186277

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 66     cctccccgccccccgcggccgc 87
              ||||||||||||||||||||||
Sbjct: 183091 cctccccgccccccgcggccgc 183070
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>gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, complete sequence
          Length = 178030

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 60    ccgccacctccccgccccccgcggcc 85
             ||||| ||||||||||||||||||||
Sbjct: 24193 ccgccgcctccccgccccccgcggcc 24218
to top
>gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, complete sequence
          Length = 168864

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 66    cctccccgccccccgcggccgc 87
             ||||||||||||||||||||||
Sbjct: 12841 cctccccgccccccgcggccgc 12820
to top
>gb|AC020612.40| Homo sapiens 12 BAC RP11-133N21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 188928

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 57    cggccgccacctccccgccccc 78
             ||||||||||||||||||||||
Sbjct: 13070 cggccgccacctccccgccccc 13091
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 22      ggccgcgctggcgctctcctc 42
               |||||||||||||||||||||
Sbjct: 1294489 ggccgcgctggcgctctcctc 1294469
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>gb|AC147676.10| Canis Familiaris, clone XX-25H12, complete sequence
          Length = 203436

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 57    cggccgccacctccccgccccccgcggcc 85
             |||||||| ||||||||||||||| ||||
Sbjct: 18509 cggccgccccctccccgccccccggggcc 18537
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 78      ccgcggccgccgacatcgccg 98
               |||||||||||||||||||||
Sbjct: 1764494 ccgcggccgccgacatcgccg 1764514
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>emb|CR352233.9| Zebrafish DNA sequence from clone CH211-193J5 in linkage group 13,
             complete sequence
          Length = 149899

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    gctctcctccgagctcctctc 54
             |||||||||||||||||||||
Sbjct: 88511 gctctcctccgagctcctctc 88531
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 78      ccgcggccgccgacatcgccg 98
               |||||||||||||||||||||
Sbjct: 3099606 ccgcggccgccgacatcgccg 3099626
to top
>emb|BX663511.8| Zebrafish DNA sequence from clone RP71-20D11 in linkage group 8,
             complete sequence
          Length = 78433

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    gctctcctccgagctcctctc 54
             |||||||||||||||||||||
Sbjct: 62605 gctctcctccgagctcctctc 62625
to top
>gb|AC087485.6| Homo sapiens chromosome 15, clone RP11-570N16, complete sequence
          Length = 169771

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    gccgccacctccccgcccccc 79
             |||||||||||||||||||||
Sbjct: 92885 gccgccacctccccgcccccc 92905
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 78      ccgcggccgccgacatcgccg 98
               |||||||||||||||||||||
Sbjct: 2247505 ccgcggccgccgacatcgccg 2247525
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>gb|AC136896.6| Homo sapiens chromosome 15, clone RP11-860O1, complete sequence
          Length = 214946

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 59     gccgccacctccccgcccccc 79
              |||||||||||||||||||||
Sbjct: 112315 gccgccacctccccgcccccc 112335
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>gb|AC135350.6| Homo sapiens chromosome 15, clone RP13-946E15, complete sequence
          Length = 158316

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 59    gccgccacctccccgcccccc 79
             |||||||||||||||||||||
Sbjct: 18614 gccgccacctccccgcccccc 18594
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 78      ccgcggccgccgacatcgccg 98
               |||||||||||||||||||||
Sbjct: 4899183 ccgcggccgccgacatcgccg 4899203
to top
>gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromosome unknown, complete
              sequence
          Length = 207441

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 66     cctccccgccccccgcggccgccga 90
              |||||||||||||| ||||||||||
Sbjct: 182073 cctccccgcccccctcggccgccga 182097
to top
>gb|BC043542.1| Homo sapiens patched homolog (Drosophila), mRNA (cDNA clone
          IMAGE:5170834), complete cds
          Length = 1403

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 67 ctccccgccccccgcggccg 86
          ||||||||||||||||||||
Sbjct: 20 ctccccgccccccgcggccg 1
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>ref|NM_185531.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1514

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 52  ctcctcggccgccacctccccgcc 75
           ||||||| ||||||||||||||||
Sbjct: 476 ctcctcgcccgccacctccccgcc 499
to top
>ref|XM_478588.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2356

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   ccgccgacatcgccggcctg 103
            ||||||||||||||||||||
Sbjct: 1979 ccgccgacatcgccggcctg 1960
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>gb|AF175325.1| Homo sapiens eukaryotic initiation factor 4AI (EIF4A1) gene, partial
            cds
          Length = 6732

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  gcgcccgactccgccccggc 204
            ||||||||||||||||||||
Sbjct: 5215 gcgcccgactccgccccggc 5196
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>ref|XM_359774.1| Magnaporthe grisea 70-15 hypothetical protein (MG05003.4) partial
           mRNA
          Length = 1698

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 221 accatcgacaagaccaagcgccggttcg 248
           |||||||||||| || ||||||||||||
Sbjct: 628 accatcgacaaggccgagcgccggttcg 655
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>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0028C22, complete sequence
          Length = 154228

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     ctcctcggccgccacctccccgcc 75
              |||||||||||||||||| |||||
Sbjct: 153786 ctcctcggccgccacctcgccgcc 153763
to top
>ref|XM_323604.1| Neurospora crassa OR74A related to beta-fructofuranosidase [MIPS]
            (NCU04265.1) partial mRNA
          Length = 2088

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   ctcctccgagctcctctcct 56
            ||||||||||||||||||||
Sbjct: 1221 ctcctccgagctcctctcct 1240
to top
>ref|XM_956163.1| Neurospora crassa OR74A related to beta-fructofuranosidase [MIPS]
            (NCU04265.1) partial mRNA
          Length = 2088

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   ctcctccgagctcctctcct 56
            ||||||||||||||||||||
Sbjct: 1221 ctcctccgagctcctctcct 1240
to top
>gb|AE009291.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 61 of
            187 of the complete sequence
          Length = 12142

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  acaagaccaagcgccggttc 247
            ||||||||||||||||||||
Sbjct: 1178 acaagaccaagcgccggttc 1197
to top
>gb|AE008321.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 125 of
             187 of the complete sequence
          Length = 14335

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   acaagaccaagcgccggttc 247
             ||||||||||||||||||||
Sbjct: 14061 acaagaccaagcgccggttc 14042
to top
>gb|BC006881.1| Mus musculus solute carrier family 35, member B3, mRNA (cDNA
          clone MGC:11822 IMAGE:3596363), complete cds
          Length = 1800

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 cctcggccgccacctccccg 73
          ||||||||||||||||||||
Sbjct: 51 cctcggccgccacctccccg 32
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>ref|XM_843923.1| PREDICTED: Canis familiaris similar to hairy and enhancer of
          split 6 (LOC607298), mRNA
          Length = 705

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 69 ccccgccccccgcggccgcc 88
          ||||||||||||||||||||
Sbjct: 23 ccccgccccccgcggccgcc 4
to top
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   cctcggccgccacctccccg 73
            ||||||||||||||||||||
Sbjct: 6185 cctcggccgccacctccccg 6204
to top
>ref|XM_542055.2| PREDICTED: Canis familiaris similar to zinc finger protein 653,
           transcript variant 1 (LOC484939), mRNA
          Length = 1914

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 52  ctcctcggccgccacctccccgcc 75
           ||||||||||||| ||||||||||
Sbjct: 209 ctcctcggccgccgcctccccgcc 186
to top
>ref|XM_848511.1| PREDICTED: Canis familiaris similar to zinc finger protein 653,
           transcript variant 2 (LOC484939), mRNA
          Length = 2233

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 52  ctcctcggccgccacctccccgcc 75
           ||||||||||||| ||||||||||
Sbjct: 209 ctcctcggccgccgcctccccgcc 186
to top
>gb|BC032613.1| Homo sapiens cDNA clone IMAGE:5555330, **** WARNING: chimeric clone
            ****
          Length = 3530

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  gcgcccgactccgccccggc 204
            ||||||||||||||||||||
Sbjct: 2032 gcgcccgactccgccccggc 2013
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>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence
          Length = 221903

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    cctcggccgccacctccccg 73
             ||||||||||||||||||||
Sbjct: 56462 cctcggccgccacctccccg 56443
to top
>emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chromosome 9q22.1-22.33
             Contains the PTCH gene for patched homolog, a novel gene,
             the gene for a novel protein similar to a metallothionein
             protein (MT1) and three CpG islands, complete sequence
          Length = 189643

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    ctccccgccccccgcggccg 86
             ||||||||||||||||||||
Sbjct: 43814 ctccccgccccccgcggccg 43795
to top
>emb|X13495.1|CRPSAF C.reinhardtii mRNA for 17 kd P21 protein of photosystem I
          Length = 1227

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
           ||||||||||| ||||||||||| |||   |||  |||||| | |||||||| |||||||
Sbjct: 202 gccgacatcgcgggcctgaccccctgctccgagagcaaggcttacgccaagctggagaag 261
to top
>gb|DQ123986.1| Coffea arabica x Coffea canephora clone HT-SSH4-E10 mRNA sequence
          Length = 714

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 51/62 (82%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
           ||||||||||| ||||| || || |||||||||  ||||   || |||||||| ||||||
Sbjct: 283 gccgacatcgctggcctcacaccatgcaaggagnncaagcaatttgccaagcgcgagaag 342

             
Query: 146 ca 147
           ||
Sbjct: 343 ca 344
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>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16
          Length = 349315

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    tcaagaagtacgcgcccgac 193
              ||||||||||||||||||||
Sbjct: 215456 tcaagaagtacgcgcccgac 215437
to top
>emb|AL513462.1|NCB8L3 Neurospora crassa DNA linkage group V BAC contig B8L3
          Length = 112716

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    ctcctccgagctcctctcct 56
             ||||||||||||||||||||
Sbjct: 80978 ctcctccgagctcctctcct 80997
to top
>emb|CR388137.8| Zebrafish DNA sequence from clone DKEY-17M13 in linkage group 5,
             complete sequence
          Length = 181599

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   ccggcgctcgccatccaggc 219
             ||||||||||||||||||||
Sbjct: 67707 ccggcgctcgccatccaggc 67726
to top
>gb|AC100748.2| Homo sapiens chromosome 17, clone CTD-2231E3, complete sequence
          Length = 133544

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    cccgccccccgcggccgccg 89
             ||||||||||||||||||||
Sbjct: 78415 cccgccccccgcggccgccg 78396
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 228     acaagaccaagcgccggttc 247
               ||||||||||||||||||||
Sbjct: 4040519 acaagaccaagcgccggttc 4040538
to top
>dbj|AK167051.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length
          enriched library, clone:I1C0028O13 product:solute
          carrier family 35, member B3, full insert sequence
          Length = 1322

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 cctcggccgccacctccccg 73
          ||||||||||||||||||||
Sbjct: 55 cctcggccgccacctccccg 36
to top
>dbj|AK077208.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
          library, clone:4933431G15 product:CGI-19 PROTEIN
          homolog [Homo sapiens], full insert sequence
          Length = 1326

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 cctcggccgccacctccccg 73
          ||||||||||||||||||||
Sbjct: 35 cctcggccgccacctccccg 16
to top
>dbj|AK079504.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
          enriched library, clone:A130081B15
          product:unclassifiable, full insert sequence
          Length = 1077

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 cctcggccgccacctccccg 73
          ||||||||||||||||||||
Sbjct: 36 cctcggccgccacctccccg 17
to top
>dbj|AK076592.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
          library, clone:4921526O06 product:CGI-19 PROTEIN
          homolog [Homo sapiens], full insert sequence
          Length = 1924

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 cctcggccgccacctccccg 73
          ||||||||||||||||||||
Sbjct: 54 cctcggccgccacctccccg 35
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 52       ctcctcggccgccacctccccgcc 75
                |||||||||||||||||| |||||
Sbjct: 19826519 ctcctcggccgccacctcgccgcc 19826496
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 52       ctcctcggccgccacctccccgcc 75
                ||||||| ||||||||||||||||
Sbjct: 29269991 ctcctcgcccgccacctccccgcc 29270014



 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 84       ccgccgacatcgccggcctg 103
                ||||||||||||||||||||
Sbjct: 21312599 ccgccgacatcgccggcctg 21312580
to top
>gb|AC024255.22|AC024255 Homo sapiens 12 BAC RP11-31A23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165236

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    gccacctccccgccccccgc 81
             ||||||||||||||||||||
Sbjct: 67832 gccacctccccgccccccgc 67851
to top
>dbj|AB198072.1| Bos taurus TPM3 mRNA for tropomyosin 3, complete cds
          Length = 1106

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   gccacctccccgccccccgc 81
            ||||||||||||||||||||
Sbjct: 1046 gccacctccccgccccccgc 1027
to top
>ref|NM_134060.2| Mus musculus solute carrier family 35, member B3 (Slc35b3), mRNA
          Length = 1924

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 54 cctcggccgccacctccccg 73
          ||||||||||||||||||||
Sbjct: 54 cctcggccgccacctccccg 35
to top
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0597G07
          Length = 152928

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    ctcctcggccgccacctccccgcc 75
             ||||||| ||||||||||||||||
Sbjct: 58680 ctcctcgcccgccacctccccgcc 58703
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>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1165_F02
          Length = 125993

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 52     ctcctcggccgccacctccccgcc 75
              ||||||| ||||||||||||||||
Sbjct: 110065 ctcctcgcccgccacctccccgcc 110088
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      gccgccgacatcgccggcct 102
               ||||||||||||||||||||
Sbjct: 7116623 gccgccgacatcgccggcct 7116604
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>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    ctcctcggccgccacctccccgcc 75
             |||||||||||||||||| |||||
Sbjct: 50959 ctcctcggccgccacctcgccgcc 50936
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>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0450E05
          Length = 176553

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     ctcctcggccgccacctccccgcc 75
              |||||||||||||||||| |||||
Sbjct: 172205 ctcctcggccgccacctcgccgcc 172182
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>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1008_E09
          Length = 101964

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    ccgccgacatcgccggcctg 103
             ||||||||||||||||||||
Sbjct: 32767 ccgccgacatcgccggcctg 32748
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>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0458H05
          Length = 136299

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    ccgccgacatcgccggcctg 103
             ||||||||||||||||||||
Sbjct: 98884 ccgccgacatcgccggcctg 98865
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>emb|AJ338797.1|HSA338797 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-TJ14R
          Length = 728

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcgcccgactccgccccggc 204
           ||||||||||||||||||||
Sbjct: 401 gcgcccgactccgccccggc 420
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>emb|AJ339124.1|HSA339124 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-BN20C
          Length = 680

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcgcccgactccgccccggc 204
           ||||||||||||||||||||
Sbjct: 401 gcgcccgactccgccccggc 420
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>emb|AJ340425.1|HSA340425 Homo sapiens genomic sequence surrounding NotI site, clone NL1-UO9R
          Length = 846

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcgcccgactccgccccggc 204
           ||||||||||||||||||||
Sbjct: 401 gcgcccgactccgccccggc 420
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>emb|AJ340397.1|HSA340397 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-SH13C
          Length = 621

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcgcccgactccgccccggc 204
           ||||||||||||||||||||
Sbjct: 401 gcgcccgactccgccccggc 420
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>emb|AJ338925.1|HSA338925 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-VJ19C
          Length = 577

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcgcccgactccgccccggc 204
           ||||||||||||||||||||
Sbjct: 401 gcgcccgactccgccccggc 420
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>emb|AJ338981.1|HSA338981 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-XM14C
          Length = 649

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcgcccgactccgccccggc 204
           ||||||||||||||||||||
Sbjct: 401 gcgcccgactccgccccggc 420
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>dbj|AK100722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116H24, full
            insert sequence
          Length = 2354

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   ccgccgacatcgccggcctg 103
            ||||||||||||||||||||
Sbjct: 1977 ccgccgacatcgccggcctg 1958
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>dbj|AK070656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055E24, full
           insert sequence
          Length = 1513

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 52  ctcctcggccgccacctccccgcc 75
           ||||||| ||||||||||||||||
Sbjct: 475 ctcctcgcccgccacctccccgcc 498
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>gb|AF135791.1|AF135791 Chlamydomonas reinhardtii photosystem I subunit F precursor (psaF)
           gene, complete cds
          Length = 2332

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 145
           ||||||||||| ||||||||||| |||   |||  |||||| | |||||||| |||||||
Sbjct: 748 gccgacatcgcgggcctgaccccctgctccgagagcaaggcttacgccaagctggagaag 807
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>ref|NM_001011674.1| Bos taurus tropomyosin 3 (TPM3), mRNA
          Length = 1106

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 62   gccacctccccgccccccgc 81
            ||||||||||||||||||||
Sbjct: 1046 gccacctccccgccccccgc 1027
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    agtacgcgcccgactccgcc 199
              ||||||||||||||||||||
Sbjct: 424692 agtacgcgcccgactccgcc 424673
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>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence
          Length = 536165

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 80     gcggccgccgacatcgccggcctg 103
              ||||||| ||||||||||||||||
Sbjct: 369847 gcggccgacgacatcgccggcctg 369870
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 62      gccacctccccgccccccgc 81
               ||||||||||||||||||||
Sbjct: 2961080 gccacctccccgccccccgc 2961099
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>emb|AJ342453.1|HSA342453 Homo sapiens genomic sequence surrounding NotI site, clone NR1-QJ1C
          Length = 598

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcgcccgactccgccccggc 204
           ||||||||||||||||||||
Sbjct: 401 gcgcccgactccgccccggc 420
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>emb|AJ342377.1|HSA342377 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-QD10R
          Length = 672

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gcgcccgactccgccccggc 204
           ||||||||||||||||||||
Sbjct: 401 gcgcccgactccgccccggc 420
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>gb|M77812.1|RABMHCP Rabbit myosin heavy chain mRNA, complete cds
          Length = 6644

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 121  caaggccttcgccaagcgggagaagcag 148
            ||||||||||||||||||| || |||||
Sbjct: 2505 caaggccttcgccaagcggcagcagcag 2532
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>gb|AC016876.10| Homo sapiens chromosome 17, clone RP11-186B7, complete sequence
          Length = 60268

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   gcgcccgactccgccccggc 204
             ||||||||||||||||||||
Sbjct: 21580 gcgcccgactccgccccggc 21599
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>dbj|AB023819.1| Oryza sativa (indica cultivar-group) osnas3 mRNA for nicotianamine
           synthase 3, complete cds
          Length = 1482

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 52  ctcctcggccgccacctccccgcc 75
           ||||||| ||||||||||||||||
Sbjct: 455 ctcctcgcccgccacctccccgcc 478


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,702,957
Number of Sequences: 3902068
Number of extensions: 1702957
Number of successful extensions: 45086
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 44142
Number of HSP's gapped (non-prelim): 947
length of query: 253
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 231
effective length of database: 17,147,199,772
effective search space: 3961003147332
effective search space used: 3961003147332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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