>EVPL_MOUSE (Q9D952) Envoplakin (p210) (210 kDa cornified envelope precursor|
            protein)
          Length = 2035

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 439  EDVAVLHPAHHRRGRRQLGGARHAHAGQTEVLRVGQQDEDGQRREVDRHRPEQ 281
            ED+  +H A     R+  G   HA   ++EVL+   ++E  +  EV R   EQ
Sbjct: 892  EDIQAIHSA-----RQGSGSPAHARTAESEVLKTQLEEERKRVAEVQRDLEEQ 939

>HDAC4_CHICK (P83038) Histone deacetylase 4 (HD4)|
          Length = 1080

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 409 HRRGRRQLGGARHAHAGQTEVLRVGQQDEDGQ-RREVDRHRPEQDLHQE 266
           H +  RQ     H H  Q E+L +  Q E  + +R++++HR EQ+L ++
Sbjct: 97  HEQLSRQHEAQLHEHIKQQEMLAMKHQQELLEHQRKLEQHRQEQELEKQ 145

>PARC_MOUSE (Q80TT8) p53-associated parkin-like cytoplasmic protein|
          Length = 1865

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -2

Query: 447 SPRKMSQYFIPLTTGADDASLVARGTLTPVRPKYCALVSRMRMASAEK*TGTGPNRTFT 271
           S R ++Q ++ +  G     L A    +   P+YC+L  R++ A +E     GP   FT
Sbjct: 807 SLRNLTQCWLSVVQGQVSRFLAAAWRASDFVPRYCSLYQRLQSAGSEL---FGPRAAFT 862

>RNC_CAEEL (O01326) Ribonuclease III (EC 3.1.26.3) (RNase III)|
          Length = 1086

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
 Frame = -1

Query: 448 LAAEDVAVLHPAHHRRGR---RQLGGARHAHAGQTEVLRVGQQDEDGQRREVDRHRPEQD 278
           L A+   ++HP H  +GR   +Q GG     A          QDE       +R  PE D
Sbjct: 147 LQADVPYIIHPCHSMKGRKTPKQKGGDESFTASDVSDDSNDSQDEASTSEPTNRQAPEAD 206

Query: 277 LHQEME 260
              E++
Sbjct: 207 KTGEVK 212

>RPC1_TRYBB (P08968) DNA-directed RNA polymerase III largest subunit (EC|
           2.7.7.6)
          Length = 1530

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -1

Query: 415 AHHRRGRRQLGGARHAHAGQTEVLRVGQQDEDGQRREVDRHR 290
           A+H   RR +    H H G T V    +  +   + E DRHR
Sbjct: 402 ANHELMRRLVRNGPHVHPGATTVYLAQEGSKKSLKNERDRHR 443


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,419,674
Number of Sequences: 219361
Number of extensions: 782607
Number of successful extensions: 2813
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2812
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)