Clone Name	baet119b07
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	203	2e-52
2	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	201	8e-52
3	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	196	2e-50
4	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	193	2e-49
5	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	188	5e-48
6	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	187	1e-47
7	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	172	4e-43
8	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	167	2e-41
9	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	164	1e-40
10	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	163	2e-40
11	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	162	4e-40
12	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	161	7e-40
13	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	161	9e-40
14	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	159	4e-39
15	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	157	2e-38
16	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	156	2e-38
17	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	154	8e-38
18	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	154	8e-38
19	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	149	3e-36
20	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	149	5e-36
21	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	149	5e-36
22	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	148	6e-36
23	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	148	6e-36
24	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	148	6e-36
25	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	148	8e-36
26	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	141	7e-34
27	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	141	7e-34
28	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	140	1e-33
29	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	139	3e-33
30	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	139	3e-33
31	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	139	4e-33
32	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	137	1e-32
33	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	136	3e-32
34	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	136	3e-32
35	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	136	3e-32
36	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	135	4e-32
37	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	132	6e-31
38	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	132	6e-31
39	FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2...	131	7e-31
40	FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2...	130	1e-30
41	FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2...	130	2e-30
42	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	128	6e-30
43	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	128	8e-30
44	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	128	8e-30
45	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	126	3e-29
46	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	125	4e-29
47	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	123	2e-28
48	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	123	3e-28
49	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	117	1e-26
50	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	115	7e-26
51	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	112	4e-25
52	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	107	2e-23
53	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	107	2e-23
54	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	105	6e-23
55	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	100	3e-21
56	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	99	4e-21
57	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	98	9e-21
58	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	97	2e-20
59	PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso...	97	2e-20
60	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	97	2e-20
61	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	97	2e-20
62	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	96	5e-20
63	PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso...	95	1e-19
64	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	92	5e-19
65	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	92	7e-19
66	CDCH_HALSA (Q9HPF0) Protein cdcH	91	1e-18
67	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	91	1e-18
68	SAV_SULAC (Q07590) SAV protein	91	2e-18
69	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	89	4e-18
70	PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote...	88	9e-18
71	PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote...	88	9e-18
72	CDC48_YEAST (P25694) Cell division control protein 48	88	1e-17
73	VAT_THEAC (O05209) VCP-like ATPase	87	2e-17
74	PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Prote...	87	2e-17
75	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	87	2e-17
76	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	87	2e-17
77	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	87	2e-17
78	PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog	86	4e-17
79	PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote...	86	5e-17
80	PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote...	86	5e-17
81	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	86	6e-17
82	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	84	2e-16
83	NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	84	2e-16
84	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	83	3e-16
85	PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-bin...	83	3e-16
86	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	83	3e-16
87	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	83	3e-16
88	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	83	3e-16
89	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	83	3e-16
90	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	83	3e-16
91	PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7	83	4e-16
92	PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 prot...	83	4e-16
93	PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-bindi...	83	4e-16
94	PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-bin...	83	4e-16
95	PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome ...	83	4e-16
96	PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome ...	83	4e-16
97	PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasom...	83	4e-16
98	PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasom...	83	4e-16
99	PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasom...	83	4e-16
100	PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo...	83	4e-16
101	PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)	82	5e-16
102	PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 prot...	82	5e-16
103	PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 prot...	82	5e-16
104	PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso...	82	7e-16
105	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	82	7e-16
106	PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog ...	82	9e-16
107	PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease sub...	82	9e-16
108	PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxi...	82	9e-16
109	PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ...	81	2e-15
110	PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro...	81	2e-15
111	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	81	2e-15
112	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	81	2e-15
113	NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	81	2e-15
114	PRS8_DROME (O18413) 26S protease regulatory subunit 8	81	2e-15
115	CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ...	80	2e-15
116	PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-b...	80	2e-15
117	PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ...	80	2e-15
118	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	80	2e-15
119	PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (S...	80	2e-15
120	PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (C...	80	2e-15
121	PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P...	80	3e-15
122	SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog	80	3e-15
123	AFG2_YEAST (P32794) Protein AFG2	80	3e-15
124	PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ...	80	3e-15
125	PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote...	79	4e-15
126	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	79	4e-15
127	PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin...	79	8e-15
128	PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-bindi...	78	1e-14
129	PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (T...	78	1e-14
130	PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxi...	77	2e-14
131	NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl...	77	2e-14
132	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	77	3e-14
133	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	77	3e-14
134	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	77	3e-14
135	PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A	77	3e-14
136	NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	76	4e-14
137	NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	76	4e-14
138	NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	76	4e-14
139	FTSH_CHLVU (P56369) Cell division protein ftsH homolog	76	4e-14
140	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	76	4e-14
141	PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (T...	76	5e-14
142	PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (...	76	5e-14
143	SEC18_YEAST (P18759) Vesicular-fusion protein SEC18	76	5e-14
144	SEC18_CANAL (P34732) Vesicular-fusion protein SEC18	75	1e-13
145	NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl...	75	1e-13
146	TBP7_CAEEL (P54816) TAT-binding homolog 7	74	1e-13
147	NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleim...	74	2e-13
148	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	74	2e-13
149	NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleim...	73	3e-13
150	PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-b...	72	5e-13
151	PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (T...	72	7e-13
152	PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro...	71	1e-12
153	PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P...	71	1e-12
154	PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P...	71	1e-12
155	PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-bindi...	71	2e-12
156	PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)...	71	2e-12
157	PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B	70	2e-12
158	PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P...	70	3e-12
159	PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)	70	3e-12
160	PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)...	69	5e-12
161	ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2	69	8e-12
162	PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	68	1e-11
163	ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2	68	1e-11
164	PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase ...	68	1e-11
165	RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7	68	1e-11
166	PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog ...	68	1e-11
167	PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog ...	68	1e-11
168	ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2	67	2e-11
169	PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog	67	2e-11
170	PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog ...	67	2e-11
171	PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4	67	3e-11
172	PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog	66	4e-11
173	PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog	66	4e-11
174	PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog	66	5e-11
175	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	65	9e-11
176	YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)	65	1e-10
177	TBP7_YEAST (P40340) TAT-binding homolog 7	64	1e-10
178	PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)	64	3e-10
179	Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c	64	3e-10
180	Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175	64	3e-10
181	PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)	63	3e-10
182	PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)	62	6e-10
183	PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)	62	7e-10
184	AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)	62	7e-10
185	Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316	62	1e-09
186	PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (P...	61	1e-09
187	PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)	60	2e-09
188	PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	60	4e-09
189	PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxiso...	60	4e-09
190	PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	60	4e-09
191	PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	60	4e-09
192	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	59	5e-09
193	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	59	5e-09
194	PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)	59	5e-09
195	PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)	59	6e-09
196	PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	59	6e-09
197	PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	59	8e-09
198	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	58	1e-08
199	PRS2_METJA (Q58889) Putative 26S protease regulatory subunit hom...	57	2e-08
200	PRS2_METTM (P42811) Putative 26S protease regulatory subunit hom...	56	5e-08
201	PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)	54	2e-07
202	ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein...	54	2e-07
203	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	52	6e-07
204	PRS2_METTH (O27092) Putative 26S protease regulatory subunit hom...	50	2e-06
205	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	50	2e-06
206	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	50	4e-06
207	MSP1_CAEEL (P54815) Protein MSP1 homolog	49	5e-06
208	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	49	5e-06
209	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	49	5e-06
210	VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a	49	8e-06
211	VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) ...	49	8e-06
212	VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)	47	2e-05
213	ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1	47	2e-05
214	ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1	47	2e-05
215	ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1	47	2e-05
216	MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)	47	2e-05
217	VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)	46	5e-05
218	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	45	7e-05
219	MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ...	45	9e-05
220	ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein...	43	3e-04
221	YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)	43	3e-04
222	YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46	43	5e-04
223	VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein ...	42	0.001
224	VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants	40	0.002
225	BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like prot...	38	0.015
226	BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like prot...	37	0.019
227	YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC ...	37	0.025
228	BCS1_YEAST (P32839) Mitochondrial chaperone BCS1	37	0.025
229	YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)	37	0.033
230	BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like prot...	37	0.033
231	YCF2_ANTFO (Q859W7) Protein ycf2	36	0.056
232	BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like prot...	35	0.12
233	BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-...	35	0.12
234	MUA1_XENLA (P10667) Integumentary mucin A.1 precursor (FIM-A.1) ...	33	0.36
235	CZF1_CANAL (P28875) Zinc finger protein 1	31	1.4
236	MDH_PYRAE (Q8ZVB2) Malate dehydrogenase (EC 1.1.1.37)	29	5.2
237	ZBT20_HUMAN (Q9HC78) Zinc finger and BTB domain-containing prote...	29	6.8
238	INT1_MOUSE (Q6P4S8) Integrator complex subunit 1 (Int1)	29	6.8
239	GATB_BORBU (O51316) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfe...	29	6.8
240	RPOC1_SINAL (P46819) DNA-directed RNA polymerase beta' chain (EC...	28	8.9
241	RPOC1_ARATH (P56763) DNA-directed RNA polymerase beta' chain (EC...	28	8.9

---

>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score =  203 bits (516), Expect = 2e-52
 Identities = 101/151 (66%), Positives = 116/151 (76%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLLTEMDGFEGNTG+IV+AATNRADILDSALLRPGRFDRQVSVDVPD RGR  IL+
Sbjct: 294 QTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILE 353

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NKK ++ VSLE IA RTPGFSG               RR ++ ++  EID SIDR+
Sbjct: 354 VHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRV 413

Query: 363 VAGMEGTVMTDGKSXSLVAYHEVGHAVCGTL 455
           VAG+EGT + D KS  L+AYHEVGHA+ G+L
Sbjct: 414 VAGLEGTPLIDSKSKRLIAYHEVGHAIIGSL 444

---

>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score =  201 bits (511), Expect = 8e-52
 Identities = 98/151 (64%), Positives = 114/151 (75%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLLTEMDGFEGNTGII++AATNR D+LD+ALLRPGRFDRQV+VDVPDV+GR EIL 
Sbjct: 294 QTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILN 353

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NKK D  +SLE+IA RTPGFSG               RR +  I+  EID SIDR+
Sbjct: 354 VHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDRV 413

Query: 363 VAGMEGTVMTDGKSXSLVAYHEVGHAVCGTL 455
           +AGMEG  + D K+  L+AYHEVGHA+ GTL
Sbjct: 414 IAGMEGKALVDSKTKRLIAYHEVGHAIIGTL 444

---

>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score =  196 bits (499), Expect = 2e-50
 Identities = 96/151 (63%), Positives = 113/151 (74%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLLTEMDGFEGNTGII++AATNR D+LDSAL+RPGRFDRQV VD PD  GR EIL+
Sbjct: 293 QTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILE 352

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NKK   +VS++ IA RTPGFSG               RR ++ I+  EIDD++DR+
Sbjct: 353 VHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRV 412

Query: 363 VAGMEGTVMTDGKSXSLVAYHEVGHAVCGTL 455
           VAGMEGT + D KS  L+AYHEVGHA+ GTL
Sbjct: 413 VAGMEGTPLVDSKSKRLIAYHEVGHAIVGTL 443

---

>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score =  193 bits (490), Expect = 2e-49
 Identities = 95/154 (61%), Positives = 112/154 (72%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLLTEMDGFEGN+GIIV+AATNR D+LD ALLRPGRFDRQV+VD PDV+GR  IL 
Sbjct: 332 QTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILA 391

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H  NKK   +V L  IA RTPGF+G               RR +  I+  E++D+IDR+
Sbjct: 392 IHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRV 451

Query: 363 VAGMEGTVMTDGKSXSLVAYHEVGHAVCGTLTPG 464
           VAGMEGT + D KS  L+AYHEVGHA+ GTL PG
Sbjct: 452 VAGMEGTPLVDSKSKRLIAYHEVGHALIGTLCPG 485

---

>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score =  188 bits (478), Expect = 5e-48
 Identities = 93/153 (60%), Positives = 110/153 (71%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLLTEMDGFEGNTG+IV+AATNR D+LD+ALLRPGRFDRQ+ V +PDV+ R  ILK
Sbjct: 275 QTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILK 334

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH + KK    VSLE +A RT GF+G               RRG   I+ KEIDD+IDR+
Sbjct: 335 VHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKEIDDAIDRV 394

Query: 363 VAGMEGTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           +AGMEGT + DGK   L+AYHE GHA+  TL P
Sbjct: 395 IAGMEGTPIMDGKIKRLIAYHETGHALTATLLP 427

---

>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score =  187 bits (474), Expect = 1e-47
 Identities = 92/153 (60%), Positives = 109/153 (71%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLLTEMDGF G+TG+IVVAATNR D+LDSALLRPGRFDRQ+ V +P++ GR  ILK
Sbjct: 292 QTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILK 351

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH   KK   DV LEVIA RTPGFSG               RRG+  I+ KEI+DSID+I
Sbjct: 352 VHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKI 411

Query: 363 VAGMEGTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           +AG+EG+ + D +   L+AYHE GHAV  T  P
Sbjct: 412 IAGLEGSPLADSRIKRLIAYHEAGHAVAATFLP 444

---

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score =  172 bits (436), Expect = 4e-43
 Identities = 92/155 (59%), Positives = 106/155 (68%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLLTEMDGFEGNTGII+VAATNR D+LDSAL+RPGRFDRQV VD PD  GR EIL 
Sbjct: 282 QTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILN 341

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH   K    DV L+ IA RTPGF+G               RR  T IS  E++D+IDR+
Sbjct: 342 VHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRV 401

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           +AG E    VM++ K  +LVAYHE GHA+ G L P
Sbjct: 402 LAGPEKKNRVMSE-KRKTLVAYHEAGHALVGALMP 435

---

>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score =  167 bits (422), Expect = 2e-41
 Identities = 84/151 (55%), Positives = 105/151 (69%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLLTEMDGF+ N G+IVV ATNRADILD+ALLRPGRFDRQV+V++PD  GR  ILK
Sbjct: 307 QTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILK 366

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NK    DVSL  +A RTPGFSG               R  ++ I+  E++++ DRI
Sbjct: 367 VHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNEAADRI 426

Query: 363 VAGMEGTVMTDGKSXSLVAYHEVGHAVCGTL 455
           + G+ G  M D K+  L+AYHEVGHA+ G++
Sbjct: 427 IGGIAGAPMEDTKNKRLIAYHEVGHAITGSV 457

---

>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  164 bits (415), Expect = 1e-40
 Identities = 87/155 (56%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDRQV+VD PDV GR +ILK
Sbjct: 371 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILK 430

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH   K    DV  E +A RTPGF+G               RR    IS  EI D+++RI
Sbjct: 431 VHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERI 490

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           +AG E    V+++ K   LVAYHE GHA+ G L P
Sbjct: 491 IAGPEKKNAVVSEEKK-RLVAYHEAGHALVGALMP 524

---

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  163 bits (413), Expect = 2e-40
 Identities = 87/155 (56%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDRQV+VD PDV GR +IL+
Sbjct: 374 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQ 433

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH   K    DV  E IA RTPG++G               RR    IS  EI D+++RI
Sbjct: 434 VHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERI 493

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           +AG E    V++D K   LVAYHE GHA+ G L P
Sbjct: 494 IAGPEKKNAVVSDEKK-KLVAYHEAGHALVGALMP 527

---

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score =  162 bits (410), Expect = 4e-40
 Identities = 86/155 (55%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPG+FDRQV+VD PDV GR  IL+
Sbjct: 351 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQ 410

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH   K    DV  + IA RTPGF+G               RR    IS  EI D+++RI
Sbjct: 411 VHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 470

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           +AG E    V++D K   LVAYHE GHA+ G L P
Sbjct: 471 IAGPEKKNAVVSDEKK-KLVAYHEAGHALVGALMP 504

---

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  161 bits (408), Expect = 7e-40
 Identities = 85/155 (54%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDRQV+VD PDV GR +IL+
Sbjct: 383 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQ 442

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH   K    DV  + +A RTPGF+G               RR    IS  EI D+++RI
Sbjct: 443 VHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERI 502

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           +AG E    V+++ K   LVAYHE GHA+ G L P
Sbjct: 503 IAGPEKKNAVVSEEKK-RLVAYHEAGHALVGALMP 536

---

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  161 bits (407), Expect = 9e-40
 Identities = 86/155 (55%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDRQV+VD PDV GR +IL+
Sbjct: 374 QTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQ 433

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH   K    DV  + IA RTPGF+G               RR    IS  EI D+++RI
Sbjct: 434 VHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERI 493

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           +AG E    V+++ K   LVAYHE GHA+ G L P
Sbjct: 494 IAGPEKKNAVVSEEKK-KLVAYHEAGHALVGALMP 527

---

>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  159 bits (401), Expect = 4e-39
 Identities = 81/150 (54%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGF  N GII++AATNRADILD ALLRPGRFDRQ++VD PDV GR  +LK
Sbjct: 282 QTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLK 341

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NK  D  V+L+ IAMRTPGFSG               R+ +  I +++ID++ DR+
Sbjct: 342 VHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRV 401

Query: 363 VAG-MEGTVMTDGKSXSLVAYHEVGHAVCG 449
           +AG  + + +   K  ++VAYHE GH V G
Sbjct: 402 IAGPAKKSRVISKKERNIVAYHEGGHTVIG 431

---

>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score =  157 bits (396), Expect = 2e-38
 Identities = 81/150 (54%), Positives = 99/150 (66%), Gaps = 1/150 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGF  N GII++AATNRADILD ALLRPGRFDRQ+ V+ PDV GR E+LK
Sbjct: 287 QTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLK 346

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NK  + DV+L+ IA RTPGFSG               R   T IS   I+++IDR+
Sbjct: 347 VHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRV 406

Query: 363 VAG-MEGTVMTDGKSXSLVAYHEVGHAVCG 449
           +AG  + + +   K   +VA+HE GH V G
Sbjct: 407 IAGPAKKSRVISPKEKKIVAWHEAGHTVVG 436

---

>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score =  156 bits (395), Expect = 2e-38
 Identities = 81/153 (52%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGF+ + GIIV+AATNR DILD ALLRPGRFDRQ+ +  PDVRGR EILK
Sbjct: 277 QTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILK 336

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NKK   DV LE +A  TPGF+G               R+G+  I+ +EI++++DRI
Sbjct: 337 VHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRI 396

Query: 363 VAGMEGTVMT-DGKSXSLVAYHEVGHAVCGTLT 458
             G+E   MT   K    +A HE GHA+ G ++
Sbjct: 397 TMGLERKGMTISPKEKEKIAIHEAGHALMGLVS 429

---

>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  154 bits (390), Expect = 8e-38
 Identities = 80/150 (53%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGFEGN GIIV+AATNR+D+LD ALLRPGRFDR+V V  PDV+GR  ILK
Sbjct: 308 QTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILK 367

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NK    DV L+++A +TPGF G               RR ++ I + +ID++ DR+
Sbjct: 368 VHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRV 427

Query: 363 VAGMEGTVMT-DGKSXSLVAYHEVGHAVCG 449
           +AG      T   K   LVAYHE GH + G
Sbjct: 428 IAGPSKKDKTVSQKERELVAYHEAGHTIVG 457

---

>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  154 bits (390), Expect = 8e-38
 Identities = 80/150 (53%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGFEGN GIIV+AATNR+D+LD ALLRPGRFDR+V V  PDV+GR  ILK
Sbjct: 308 QTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILK 367

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NK    DV L+++A +TPGF G               RR ++ I + +ID++ DR+
Sbjct: 368 VHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRV 427

Query: 363 VAGMEGTVMT-DGKSXSLVAYHEVGHAVCG 449
           +AG      T   K   LVAYHE GH + G
Sbjct: 428 IAGPSKKDKTVSQKERELVAYHEAGHTIVG 457

---

>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score =  149 bits (377), Expect = 3e-36
 Identities = 76/151 (50%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGF   TG++V+AATNR D+LD ALLRPGRFDR + +++PD++ R  ILK
Sbjct: 352 QTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILK 411

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NK   + +SL  +A RTPGFSG               R  RT I+  +ID++IDR+
Sbjct: 412 VHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRV 471

Query: 363 VAG--MEGTVMTDGKSXSLVAYHEVGHAVCG 449
           +AG   +  V++D +   LVAYHE GHA+ G
Sbjct: 472 IAGPAKKSRVISD-EDRKLVAYHEAGHALVG 501

---

>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  149 bits (375), Expect = 5e-36
 Identities = 80/155 (51%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDRQV V +PDVRGR +ILK
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH        D+   +IA  TPGFSG               R  +  +S  E + + D+I
Sbjct: 333 VHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI 392

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G E    VMT+ +  S  AYHE GHA+ G L P
Sbjct: 393 MMGAERRSMVMTEAQKES-TAYHEAGHAIIGRLVP 426

---

>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  149 bits (375), Expect = 5e-36
 Identities = 80/155 (51%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDRQV V +PDVRGR +ILK
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH        D+   +IA  TPGFSG               R  +  +S  E + + D+I
Sbjct: 333 VHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI 392

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G E    VMT+ +  S  AYHE GHA+ G L P
Sbjct: 393 MMGAERRSMVMTEAQKES-TAYHEAGHAIIGRLVP 426

---

>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  148 bits (374), Expect = 6e-36
 Identities = 80/155 (51%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDRQV V +PDVRGR +ILK
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH        D+   +IA  TPGFSG               R  +  +S  E + + D+I
Sbjct: 333 VHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI 392

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G E    VMT+ +  S  AYHE GHA+ G L P
Sbjct: 393 MMGAERRSMVMTEAQKES-TAYHEAGHAIIGRLVP 426

---

>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  148 bits (374), Expect = 6e-36
 Identities = 80/155 (51%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDRQV V +PDVRGR +ILK
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH        D+   +IA  TPGFSG               R  +  +S  E + + D+I
Sbjct: 333 VHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI 392

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G E    VMT+ +  S  AYHE GHA+ G L P
Sbjct: 393 MMGAERRSMVMTEAQKES-TAYHEAGHAIIGRLVP 426

---

>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  148 bits (374), Expect = 6e-36
 Identities = 80/155 (51%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDRQV V +PDVRGR +ILK
Sbjct: 273 QTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILK 332

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH        D+   +IA  TPGFSG               R  +  +S  E + + D+I
Sbjct: 333 VHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKI 392

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G E    VMT+ +  S  AYHE GHA+ G L P
Sbjct: 393 MMGAERRSMVMTEAQKES-TAYHEAGHAIIGRLVP 426

---

>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score =  148 bits (373), Expect = 8e-36
 Identities = 75/151 (49%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGF   TG++V+AATNR D+LD ALLRPGRFDR + +++PD++ R  IL+
Sbjct: 349 QTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQ 408

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH  NK   + +SL  +A RTPGFSG               R  RT I+  +ID++IDR+
Sbjct: 409 VHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRV 468

Query: 363 VAG--MEGTVMTDGKSXSLVAYHEVGHAVCG 449
           +AG   +  V++D     LVAYHE GHA+ G
Sbjct: 469 IAGPAKKSRVVSDA-DRKLVAYHEAGHALVG 498

---

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score =  141 bits (356), Expect = 7e-34
 Identities = 69/155 (44%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGF+  TG+I++AATNR D+LD ALLRPGRFDRQV VD PD++GR  IL+
Sbjct: 261 QTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILR 320

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H  N K   +V L+ +A  T G+SG               R GR  +   ++D+++++ 
Sbjct: 321 IHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAVEKT 380

Query: 363 VAGME-GTVMTDGKSXSLVAYHEVGHAVCGTLTPG 464
           + G++  + +   +   ++AYHE GHA+ GT T G
Sbjct: 381 MIGLQKKSRVIREEERRIIAYHETGHALAGTFTKG 415

---

>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score =  141 bits (356), Expect = 7e-34
 Identities = 76/157 (48%), Positives = 101/157 (64%), Gaps = 3/157 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEG-NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 179
           QTLNQLLTEMDGF      +IV+AATNR + LD ALLRPGRFDRQV VD PD+ GR +IL
Sbjct: 296 QTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKIL 355

Query: 180 KVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDR 359
           +++    K D +V L+ IA RTPGF+G               R  +  ++  +  ++I+R
Sbjct: 356 EIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFREAIER 415

Query: 360 IVAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTPG 464
           +VAG+E    V++D K   +VAYHEVGHA+ G + PG
Sbjct: 416 VVAGLEKKSRVLSD-KEKKIVAYHEVGHALVGAVMPG 451

---

>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score =  140 bits (354), Expect = 1e-33
 Identities = 76/155 (49%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGF+GN GII++AATNR D+LD ALLRPGRFDRQV V +PD+RGR +ILK
Sbjct: 273 QTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILK 332

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH        DV   +IA  TPGFSG               R  +  +S  E + + D++
Sbjct: 333 VHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKM 392

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G E    VM+D +  S  AYHE GH + G L P
Sbjct: 393 MMGSERRSMVMSDFQKES-TAYHEAGHVIIGRLVP 426

---

>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  139 bits (351), Expect = 3e-33
 Identities = 68/154 (44%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGFE N G++++AATNR D+LD ALLRPGRFDRQ++V  PD+ GR +ILK
Sbjct: 276 QTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILK 335

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH    K+++ V   +IA  TPGFSG               R G+  +   +++++ D++
Sbjct: 336 VHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKV 395

Query: 363 VAG-MEGTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G +  ++    K   L AYHE GHA+ G   P
Sbjct: 396 LMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCP 429

---

>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score =  139 bits (351), Expect = 3e-33
 Identities = 68/154 (44%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGFE N G++++AATNR D+LD ALLRPGRFDRQ++V  PD+ GR +ILK
Sbjct: 276 QTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILK 335

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH    K+++ V   +IA  TPGFSG               R G+  +   +++++ D++
Sbjct: 336 VHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKV 395

Query: 363 VAGM-EGTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G+   ++    K   L AYHE GHA+ G   P
Sbjct: 396 LMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCP 429

---

>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score =  139 bits (350), Expect = 4e-33
 Identities = 76/155 (49%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGF+GN G+I++AATNR D+LD ALLRPGRFDRQV V +PDVRGR +ILK
Sbjct: 273 QTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILK 332

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH        DV   +IA  TPGFSG               R     +S    + + D+I
Sbjct: 333 VHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKI 392

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G E    VM+D +  S  AYHE GH + G L P
Sbjct: 393 MMGSERRSMVMSDFQKES-TAYHEAGHVIIGRLVP 426

---

>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score =  137 bits (345), Expect = 1e-32
 Identities = 72/155 (46%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGF+GN GII++AATNR D+LD ALLRPGRFDRQ+ V +PD+RGR +I++
Sbjct: 273 QTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQ 332

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH        +V   +IA  TPGFSG               R  R  +   + + + D+I
Sbjct: 333 VHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFESAKDKI 392

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
             G E    VMT+ K     AYHE GH + G L P
Sbjct: 393 TMGSERRSMVMTE-KQKESTAYHEAGHVIVGRLVP 426

---

>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score =  136 bits (342), Expect = 3e-32
 Identities = 74/155 (47%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGF GN G+IV+AATNR D+LD AL RPGRFDRQV V +PDV+GR +ILK
Sbjct: 272 QTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILK 331

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH        DV    +A  TPG+SG               R  +  ++  E + + D+I
Sbjct: 332 VHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKI 391

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
             G E    +MTD K     AYHE GHA+ G L P
Sbjct: 392 NMGPERRTMIMTD-KQKESTAYHEAGHAIVGYLVP 425

---

>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score =  136 bits (342), Expect = 3e-32
 Identities = 74/155 (47%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDGF GN G+IV+AATNR D+LD AL RPGRFDRQV V +PDV+GR +ILK
Sbjct: 18  QTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILK 77

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH        DV    +A  TPG+SG               R  +  ++  E + + D+I
Sbjct: 78  VHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKI 137

Query: 363 VAGME--GTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
             G E    +MTD K     AYHE GHA+ G L P
Sbjct: 138 NMGPERRTMIMTD-KQKESTAYHEAGHAIVGYLVP 171

---

>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score =  136 bits (342), Expect = 3e-32
 Identities = 70/151 (46%), Positives = 96/151 (63%), Gaps = 2/151 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 179
           QTLNQLL EMDGF+ +   +IV+AATNR+D+LD ALLRPGRFDR+V V  PDV+GR  +L
Sbjct: 314 QTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVL 373

Query: 180 KVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDR 359
           KVH  NK   +DV L  +A +TPG+ G               R+ +  I++ +ID+ +DR
Sbjct: 374 KVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEGMDR 433

Query: 360 IVAG-MEGTVMTDGKSXSLVAYHEVGHAVCG 449
            +AG  +   +   +   +VAYHE GHA+ G
Sbjct: 434 AMAGPAKKDRIQSMREREIVAYHEAGHAIVG 464

---

>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score =  135 bits (341), Expect = 4e-32
 Identities = 69/155 (44%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQ+L EMDG   N GI+++ ATNR D+LD ALLRPGRFDR ++V +PD++ R EILK
Sbjct: 333 QTLNQILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILK 392

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H   K+   ++  + IA RTPG+SG               R     I S +ID++IDR+
Sbjct: 393 LHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAIDRV 452

Query: 363 VAG-MEGTVMTDGKSXSLVAYHEVGHAVCGTLTPG 464
           +AG  + + +   +    VAYHE GHAV G    G
Sbjct: 453 MAGPAKKSRVISQEELKAVAYHEAGHAVVGLKVKG 487

---

>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score =  132 bits (331), Expect = 6e-31
 Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QT+NQLL EMDGF+ N G+I++ ATN  + LD+AL+RPGRFD QV+V  PDV+GRTEILK
Sbjct: 458 QTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILK 517

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
            + +  KFD  V  E+IA  T GFSG                 G+  ++ KE++ S D+I
Sbjct: 518 WYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKI 577

Query: 363 VAGME-GTVMTDGKSXSLVAYHEVGHAVCGTLT 458
           + G E  +V  D K+ ++ AYHE GHA+    T
Sbjct: 578 LMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 610

---

>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score =  132 bits (331), Expect = 6e-31
 Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QT+NQLL EMDGF+ N G+I++ ATN  + LD+AL+RPGRFD QV+V  PDV+GRTEILK
Sbjct: 400 QTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILK 459

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
            + +  KFD  V  E+IA  T GFSG                 G+  ++ KE++ S D+I
Sbjct: 460 WYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKI 519

Query: 363 VAGME-GTVMTDGKSXSLVAYHEVGHAVCGTLT 458
           + G E  +V  D K+ ++ AYHE GHA+    T
Sbjct: 520 LMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 552

---

>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score =  131 bits (330), Expect = 7e-31
 Identities = 74/156 (47%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEG-NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 179
           QTLNQLL EMDGF   N  +IV+AATNR +ILD ALLRPGRFDRQV VD PD +GR EIL
Sbjct: 298 QTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKGRVEIL 357

Query: 180 KVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDR 359
           KVH    K   DV L+ IA  T G +G              GR  +  +  + + ++++R
Sbjct: 358 KVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVER 417

Query: 360 IVAGME-GTVMTDGKSXSLVAYHEVGHAVCGTLTPG 464
            +AG+E  +     K   +VAYHE GHAV   +T G
Sbjct: 418 GIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKG 453

---

>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score =  130 bits (328), Expect = 1e-30
 Identities = 72/156 (46%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEG-NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 179
           QTLNQLL EMDGF   N  +IV+AATNR +ILD AL+RPGRFDRQV VD PD  GR EIL
Sbjct: 292 QTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEIL 351

Query: 180 KVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDR 359
           KVH    K   DV+L+ +A  T G +G              GR  +  +  + + ++++R
Sbjct: 352 KVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVER 411

Query: 360 IVAGME-GTVMTDGKSXSLVAYHEVGHAVCGTLTPG 464
            +AG+E  +     K   +VAYHE GHAV   +T G
Sbjct: 412 GIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKG 447

---

>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score =  130 bits (327), Expect = 2e-30
 Identities = 72/156 (46%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEG-NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 179
           QTLNQLL EMDGF   N  +IV+AATNR +ILD AL+RPGRFDRQV VD PD  GR EIL
Sbjct: 292 QTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEIL 351

Query: 180 KVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDR 359
           KVH    K   DV+L+ +A  T G +G              GR  +  +  + + ++++R
Sbjct: 352 KVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVER 411

Query: 360 IVAGME-GTVMTDGKSXSLVAYHEVGHAVCGTLTPG 464
            +AG+E  +     K   +VAYHE GHAV   +T G
Sbjct: 412 GIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKG 447

---

>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score =  128 bits (322), Expect = 6e-30
 Identities = 70/153 (45%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QT+ QLL EMDGF+ N G+I++ ATN  + LD+AL+RPGRFD QV+V  PDV+GRTEILK
Sbjct: 400 QTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILK 459

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
            + +  KFD  V  E+IA  T GFSG                 G+  ++ KE++ S D+I
Sbjct: 460 WYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKI 519

Query: 363 VAGME-GTVMTDGKSXSLVAYHEVGHAVCGTLT 458
           + G E  +V  D K+ ++ AYHE GHA+    T
Sbjct: 520 LMGPERRSVEIDNKNKTITAYHESGHAIIAYYT 552

---

>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  128 bits (321), Expect = 8e-30
 Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGF    G+I++AATNR DILD ALLRPGRFDRQ+ V  PD+ GR  +L+
Sbjct: 284 QTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLR 343

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH   K   AD  L+ +A RT G +G               R   T I+   +++++DR+
Sbjct: 344 VHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRV 403

Query: 363 VAG--MEGTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G   +G ++++ +   + AYHE GH +     P
Sbjct: 404 IGGPRRKGRIISE-QEKKITAYHEGGHTLAAWAMP 437

---

>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  128 bits (321), Expect = 8e-30
 Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGF    G+I++AATNR DILD ALLRPGRFDRQ+ V  PD+ GR  +L+
Sbjct: 284 QTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLR 343

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH   K   AD  L+ +A RT G +G               R   T I+   +++++DR+
Sbjct: 344 VHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRV 403

Query: 363 VAG--MEGTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G   +G ++++ +   + AYHE GH +     P
Sbjct: 404 IGGPRRKGRIISE-QEKKITAYHEGGHTLAAWAMP 437

---

>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score =  126 bits (316), Expect = 3e-29
 Identities = 66/153 (43%), Positives = 88/153 (57%), Gaps = 5/153 (3%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKV 185
           TLNQLL EMDGF   T ++++A TNR DILD ALLRPGRFDRQ+ +  PD++GR  I KV
Sbjct: 430 TLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKV 489

Query: 186 HGSNKKFDADVSLEVIAMR----TPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSI 353
           H    K D+ +  + +A +    TPGFSG               R     I+ K  + +I
Sbjct: 490 HLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAI 549

Query: 354 DRIVAGME-GTVMTDGKSXSLVAYHEVGHAVCG 449
           +R++ G+E  T +   +    VAYHE GHAV G
Sbjct: 550 ERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAG 582

---

>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score =  125 bits (315), Expect = 4e-29
 Identities = 66/153 (43%), Positives = 88/153 (57%), Gaps = 5/153 (3%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKV 185
           TLNQLL EMDGF   T ++++A TNR DILD ALLRPGRFDRQ+ +  PD++GR  I KV
Sbjct: 429 TLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKV 488

Query: 186 HGSNKKFDADVSLEVIAMR----TPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSI 353
           H    K D+ +  + +A +    TPGFSG               R     I+ K  + +I
Sbjct: 489 HLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAI 548

Query: 354 DRIVAGME-GTVMTDGKSXSLVAYHEVGHAVCG 449
           +R++ G+E  T +   +    VAYHE GHAV G
Sbjct: 549 ERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAG 581

---

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score =  123 bits (309), Expect = 2e-28
 Identities = 63/155 (40%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDGF    G+I++AATNR DILD ALLRPGRFDRQ+ V  PD+ GR  +L+
Sbjct: 284 QTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLR 343

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH   K    D  L+ +A RT G +G               R     I+   +++++DR+
Sbjct: 344 VHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVITGPALEEAVDRV 403

Query: 363 VAG--MEGTVMTDGKSXSLVAYHEVGHAVCGTLTP 461
           + G   +G ++++ +   + AYHE GH +     P
Sbjct: 404 IGGPRRKGRIISE-QEKKITAYHEGGHTLAAWAMP 437

---

>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score =  123 bits (308), Expect = 3e-28
 Identities = 62/153 (40%), Positives = 88/153 (57%), Gaps = 5/153 (3%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKV 185
           TLNQ+L EMDGF  +T ++V+A TNR DILD AL RPGRFDRQ+ +  PD++GR+ I KV
Sbjct: 296 TLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKV 355

Query: 186 HGSNKKFDADVSLEVIAMR----TPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSI 353
           H    K D  +S + ++ +    TPGF+G               R     +  +  + +I
Sbjct: 356 HLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAI 415

Query: 354 DRIVAGME-GTVMTDGKSXSLVAYHEVGHAVCG 449
           +R++ G+E  T +      + VAYHE GHAV G
Sbjct: 416 ERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVG 448

---

>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score =  117 bits (293), Expect = 1e-26
 Identities = 63/155 (40%), Positives = 88/155 (56%), Gaps = 7/155 (4%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKV 185
           TLNQLL EMDGF  +  ++V+A TNR D+LD+AL+RPGRFDR + +D PDV GR +I  V
Sbjct: 412 TLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLV 471

Query: 186 HGSNKKFDADVSLEV------IAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDD 347
           H      D  ++ ++      +A  TPGF+G               R     I+    + 
Sbjct: 472 HLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQ 531

Query: 348 SIDRIVAGME-GTVMTDGKSXSLVAYHEVGHAVCG 449
           +I+R++AG+E  T +   +    VAYHE GHAVCG
Sbjct: 532 AIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCG 566

---

>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score =  115 bits (287), Expect = 7e-26
 Identities = 60/151 (39%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKV 185
           TLNQ+L EMDGF     ++V+A TNR DILD ALLRPGRFDR +++D P++ GR  I  V
Sbjct: 471 TLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAV 530

Query: 186 HGSNKKFDADV--SLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDR 359
           H  + K   ++      +A  TPGFSG               R     +     + +I+R
Sbjct: 531 HLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIER 590

Query: 360 IVAGME-GTVMTDGKSXSLVAYHEVGHAVCG 449
           ++ G+E  + +   +   +VAYHE GHAVCG
Sbjct: 591 VIGGVERKSKLLSPEEKKVVAYHEAGHAVCG 621

---

>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score =  112 bits (281), Expect = 4e-25
 Identities = 61/155 (39%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL E+DGF   +GII++ ATN  + LD AL RPGRFD+ V+VD+PDVRGR +ILK
Sbjct: 399 QTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILK 458

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
            H        +V   +IA  TPG SG               ++    +     + + D+I
Sbjct: 459 HHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKI 518

Query: 363 VAGME-GTVMTDGKSXSLVAYHEVGHAVCGTLTPG 464
           + G E  T++    +    A+HE GHA+    T G
Sbjct: 519 LMGAERKTMVLTDAARKATAFHEAGHAIMAKYTNG 553

---

>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score =  107 bits (267), Expect = 2e-23
 Identities = 56/152 (36%), Positives = 83/152 (54%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QT+NQLL EMDGF+   GIIV+ ATN+A++LD ALLRPGRFD Q+ V  P   GR  +L 
Sbjct: 285 QTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLN 344

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           ++    K  +++ +E +A  T G++G                R    +    + D+ DR+
Sbjct: 345 LYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHHLWDARDRL 404

Query: 363 VAGMEGTVMTDGKSXSLVAYHEVGHAVCGTLT 458
           + G       D ++  + A+HE GHA+   LT
Sbjct: 405 IMGPAKRRPLDDQTNRVSAFHEAGHALVALLT 436

---

>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score =  107 bits (267), Expect = 2e-23
 Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 3/152 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QTLNQLL EMDG      +IV+A+TNRADILD AL+RPGR DR V +D+P ++ R EI +
Sbjct: 431 QTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFE 490

Query: 183 VHGSNKKFDADVSL--EVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSID 356
            H  + K     +   + +A  TPGFSG               R G T + +   + +++
Sbjct: 491 QHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVE 550

Query: 357 RIVAG-MEGTVMTDGKSXSLVAYHEVGHAVCG 449
           R++AG  + + +   +   +VA+HE GHA+ G
Sbjct: 551 RVLAGTAKKSKILSKEEQKVVAFHESGHALVG 582

---

>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score =  105 bits (262), Expect = 6e-23
 Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QT+NQLL+EMDGF  N GIIV+AATNR D LD ALLRPGRFD +V+V  PD+ GR +I  
Sbjct: 320 QTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFN 379

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
            + S       +  +V+A  + GF+G                     ++   +D++ DR+
Sbjct: 380 FYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRV 439

Query: 363 VAG--MEGTVMTDGKSXSLVAYHEVGHAVCGTLT 458
           + G    G  + D ++    AYHE GH +    T
Sbjct: 440 LMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYT 473

---

>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 49/120 (40%), Positives = 75/120 (62%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL E+DGF+    + ++AATNR DILD ALLRPGRFDR + V +PD +GRTEI  
Sbjct: 256 RTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFN 315

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           ++    K + +++LE+++  T GFSG               R GR  ++  ++ ++I++I
Sbjct: 316 IYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKI 375

---

>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 51/125 (40%), Positives = 74/125 (59%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ QLL E+DGF+    + V+AATNR D++D A+LRPGRFDR + V +P +RGR EIL 
Sbjct: 261 RTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILG 320

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H    K   DV LE IA  T GFSG               RRG   I+  ++  +++++
Sbjct: 321 IHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKV 380

Query: 363 VAGME 377
            A ++
Sbjct: 381 KAALD 385

---

>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 98.2 bits (243), Expect = 9e-21
 Identities = 55/121 (45%), Positives = 71/121 (58%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL EMDGF+    + V+AATNR DILD ALLRPGRFDR + V +PD  GR EILK
Sbjct: 262 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILK 321

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH    K   +V L VIA  T G SG               R  RT ++ ++   ++D++
Sbjct: 322 VHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKV 380

Query: 363 V 365
           +
Sbjct: 381 L 381

---

>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 59/143 (41%), Positives = 79/143 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL EMDGF+    + V+AATNR DILD ALLRPGRFDR + V +PD +GR EILK
Sbjct: 260 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILK 319

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH + K     V L VIA  T G SG               R  RT ++  +   ++D++
Sbjct: 320 VH-TRKMNLKGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKV 378

Query: 363 VAGMEGTVMTDGKSXSLVAYHEV 431
           +        ++ +    +A HEV
Sbjct: 379 IG-------SEKRLAQQIAMHEV 394

---

>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 55/121 (45%), Positives = 70/121 (57%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL EMDGF+    + V+AATNR DILD ALLRPGRFDR + V +PD  GR EILK
Sbjct: 259 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILK 318

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH    K    V L +IA  T G SG               R  RT ++ ++   +ID++
Sbjct: 319 VHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKV 377

Query: 363 V 365
           +
Sbjct: 378 L 378

---

>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 52/121 (42%), Positives = 71/121 (58%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL E+DGFE    + +VAATNR DILD ALLRPGRFDR + V +P+  GR EILK
Sbjct: 273 RTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILK 332

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H S      +V +E++A  T G SG               R  R  ++  +  D++D+I
Sbjct: 333 IHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKI 392

Query: 363 V 365
           +
Sbjct: 393 M 393

---

>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 54/121 (44%), Positives = 69/121 (57%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL EMDGF+    + V+AATNR DILD ALLRPGRFDR + V +PD  GR EILK
Sbjct: 262 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILK 321

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           VH    K    V L  IA  T G SG               R  RT ++ ++   ++D++
Sbjct: 322 VHTRRMKLKG-VDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKV 380

Query: 363 V 365
           +
Sbjct: 381 L 381

---

>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 95.9 bits (237), Expect = 5e-20
 Identities = 52/125 (41%), Positives = 69/125 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL EMDGF+    I V+AATNR DILD ALLRPGRFDR + + +PD  GR EI K
Sbjct: 301 RTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFK 360

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H  +     DV L+ +A  T G SG               R  R  ++  +   ++DR+
Sbjct: 361 IHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRV 420

Query: 363 VAGME 377
           +   E
Sbjct: 421 MGKKE 425

---

>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 50/131 (38%), Positives = 74/131 (56%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL E+DGF+    + ++AATNR DILD ALLRPGRFDR + V +P+  GR EI +
Sbjct: 256 RTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFR 315

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           ++    K D ++  +++A  T GFSG               R GR  ++  ++  +I++I
Sbjct: 316 IYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKI 375

Query: 363 VAGMEGTVMTD 395
            A       TD
Sbjct: 376 KAKNNKAKNTD 386

---

>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score = 92.4 bits (228), Expect = 5e-19
 Identities = 49/121 (40%), Positives = 67/121 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL EMDGF+    + ++ ATNR DILD A+LRPGRFDR + V  PD +GR EILK
Sbjct: 292 RTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILK 351

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H        DV+LE IA  T G  G               R  R  ++  +   ++++I
Sbjct: 352 IHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKI 411

Query: 363 V 365
           +
Sbjct: 412 M 412

---

>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score = 92.0 bits (227), Expect = 7e-19
 Identities = 43/86 (50%), Positives = 60/86 (69%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQLLTE+DG E    ++V+AATNR DI+D ALLRPGR DR + V VPD + R +I K
Sbjct: 572 KVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFK 631

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
           +H  +     DV+LE +A +T G++G
Sbjct: 632 IHTRSMNLAEDVNLEELAKKTEGYTG 657



 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 42/82 (51%), Positives = 54/82 (65%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGS 194
           QLLT MDG +G   ++V+ ATNR + LD AL RPGRFDR++ + VPD  GR EIL++H  
Sbjct: 302 QLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTR 361

Query: 195 NKKFDADVSLEVIAMRTPGFSG 260
           N     DV L+ +A  T GF G
Sbjct: 362 NMPLAEDVDLDYLADVTHGFVG 383

---

>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 54/124 (43%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGS 194
           QLLT MDG EG   +IV+AATNR D +D AL RPGRFDR++ + VPD  GR EILK+H  
Sbjct: 312 QLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTR 371

Query: 195 NKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEID---DSIDRIV 365
                 DV+L  +A  T GF G               RR    I   E D     IDR++
Sbjct: 372 GMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMI 431

Query: 366 AGME 377
              E
Sbjct: 432 VKRE 435



 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 44/86 (51%), Positives = 58/86 (67%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQLLTE+DG E    ++V+AATNR DI+D AL+R GRFDR V V  P + GR +ILK
Sbjct: 582 RVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILK 641

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
           +H  +    ADVSL  +A R  G+ G
Sbjct: 642 IHTQDTPLAADVSLRELAERADGYVG 667

---

>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 45/120 (37%), Positives = 67/120 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL EMDGF+    I ++AATNR D+LD A+LRPGRFDR V V +P +  R +ILK
Sbjct: 281 RTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILK 340

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H        D+  + +A  T G SG               RR +  +  +E  ++++++
Sbjct: 341 IHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKV 400

---

>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 47/84 (55%), Positives = 56/84 (66%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLL EMDG      ++++AATNR DILD ALLRPGRFDR + V  PD   R EILKVH
Sbjct: 609 VNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVH 668

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N     DVSLE IA +  G++G
Sbjct: 669 TKNVPLAEDVSLEDIAEKAEGYTG 692



 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 41/82 (50%), Positives = 55/82 (67%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGS 194
           QLLT MDG +G   +IV+ ATNR D +D AL RPGRFDR++ +  PD +GR +IL+VH  
Sbjct: 335 QLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTR 394

Query: 195 NKKFDADVSLEVIAMRTPGFSG 260
           N     DV L+ +A  T G++G
Sbjct: 395 NMPITDDVDLDKLAEMTYGYTG 416

---

>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 45/132 (34%), Positives = 70/132 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL EMDGF+    I ++AATNR D+LD A+LRPGRFDR V V +P +  R +ILK
Sbjct: 281 RTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILK 340

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H        D+  + +A  T G SG               R+ +  +  ++  ++++++
Sbjct: 341 IHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKV 400

Query: 363 VAGMEGTVMTDG 398
               +   M  G
Sbjct: 401 SMAADTQKMMPG 412

---

>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 88.2 bits (217), Expect = 9e-18
 Identities = 41/125 (32%), Positives = 70/125 (56%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +++ ++DGF+    I V+ ATNR D LD ALLRPGR DR+V   +PD+ GRT+I K
Sbjct: 290 RTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFK 349

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H      + D+  E++A   P  +G               R  R  ++ K+  D+++++
Sbjct: 350 IHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409

Query: 363 VAGME 377
           + G +
Sbjct: 410 IKGYQ 414

---

>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 88.2 bits (217), Expect = 9e-18
 Identities = 41/125 (32%), Positives = 70/125 (56%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +++ ++DGF+    I V+ ATNR D LD ALLRPGR DR+V   +PD+ GRT+I K
Sbjct: 290 RTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFK 349

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H      + D+  E++A   P  +G               R  R  ++ K+  D+++++
Sbjct: 350 IHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409

Query: 363 VAGME 377
           + G +
Sbjct: 410 IKGYQ 414

---

>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 40/86 (46%), Positives = 58/86 (67%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + ++QLLT MDG +  + ++V+AATNR + +D AL R GRFDR+V + +PD  GR E+L+
Sbjct: 333 RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLR 392

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
           +H  N K   DV LE +A  T G+ G
Sbjct: 393 IHTKNMKLADDVDLEALAAETHGYVG 418



 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 37/86 (43%), Positives = 48/86 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQLLTEMDG      + V+ ATNR D +D A+LRPGR D+ + V +PD   R  IL 
Sbjct: 609 RVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILN 668

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
                   +  + L  IA  T GFSG
Sbjct: 669 AQLRKTPLEPGLELTAIAKATQGFSG 694

---

>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLLT +DG E   G++V+ ATNR DI+D ALLR GRFD+ + +  PD   R  ILKVH
Sbjct: 589 VNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVH 648

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRG--RTGISSKEIDDSIDRI 362
             N     DV L  IA RT G+ G               R     T +S K   D++  I
Sbjct: 649 TKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTI 708

Query: 363 VAGMEGTVM 389
              ++  V+
Sbjct: 709 RPSVDEEVI 717



 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGS 194
           QLLT MDG +    +IV+ ATNR D +D AL RPGRFDR++ + VPD  GR EIL +H  
Sbjct: 313 QLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTR 372

Query: 195 N-----KKFDADVSLEVIAMRTPGFSG 260
           N      + + +  LE +A  T GF G
Sbjct: 373 NMPLGMSEEEKNKFLEEMADYTYGFVG 399

---

>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome|
           regulatory subunit 1)
          Length = 411

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 49/132 (37%), Positives = 70/132 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ QLL+EMDGF+    I ++AATNR D+LDSA+LRPGRFDR + V  P+   R  IL+
Sbjct: 274 RTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILE 333

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         V    +A  T  FSG               R  R  +  ++ DD+ +++
Sbjct: 334 IHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKL 393

Query: 363 VAGMEGTVMTDG 398
           VA  EG   + G
Sbjct: 394 VA--EGDTESSG 403

---

>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 40/86 (46%), Positives = 59/86 (68%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + ++QLLTE+DG E    ++V+AATNR D++D ALLRPGR +R + +  PD + R EI K
Sbjct: 575 RVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFK 634

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
           +H   K    DV++E +A +T G+SG
Sbjct: 635 IHLRGKPLADDVNIEELAEKTEGYSG 660



 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 43/82 (52%), Positives = 52/82 (63%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGS 194
           QLL  MDG E    +IV+AATNR D +D AL RPGRFDR++ + VPD  GR EIL++H  
Sbjct: 305 QLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTR 364

Query: 195 NKKFDADVSLEVIAMRTPGFSG 260
                 DV LE +A  T GF G
Sbjct: 365 KMPLAEDVDLEELAELTNGFVG 386

---

>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
           (p97/CDC48 homolog 1)
          Length = 809

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 42/84 (50%), Positives = 57/84 (67%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +G + ++V+AATNR + +D AL R GRFDR++ + +PD  GR EIL++H
Sbjct: 331 VSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIH 390

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N K   DV LE IA    GF G
Sbjct: 391 TKNMKLADDVDLEQIANECHGFVG 414



 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 36/86 (41%), Positives = 51/86 (59%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQ+LTEMDG      + ++ ATNR DI+D A+LRPGR D+ + + +PD   R +ILK
Sbjct: 606 RVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILK 665

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
                     D+ L  +A  T GFSG
Sbjct: 666 ASLRKTPLSKDLDLTFLAKNTVGFSG 691

---

>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 43/86 (50%), Positives = 58/86 (67%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + ++QLLT MDG +  + ++V+AATNR + +D AL R GRFDR+V V +PD  GR EIL+
Sbjct: 343 RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILR 402

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
           +H  N K   DV LE IA  T G+ G
Sbjct: 403 IHTKNMKLADDVDLEQIAAETHGYVG 428



 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 38/86 (44%), Positives = 50/86 (58%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQLLTEMDG      + V+ ATNR D +D AL+RPGR D+ + V +PD   R  IL+
Sbjct: 618 RVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQ 677

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
               +     DV L  +A  T GFSG
Sbjct: 678 TQLRHTPVAEDVDLRAVAKATHGFSG 703

---

>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog|
          Length = 438

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 43/123 (34%), Positives = 68/123 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +L+T++DGF+    I V+ ATNR + LD AL+RPGR DR+V   +PD+ GR  IL+
Sbjct: 301 RTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILR 360

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H  +   D D+  E+IA   P  +G               R  R   + K+  D++ ++
Sbjct: 361 IHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKV 420

Query: 363 VAG 371
           V G
Sbjct: 421 VKG 423

---

>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 40/125 (32%), Positives = 69/125 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +++ ++DGF+    I V+ ATNR D LD ALLRPGR DR+V   +PD+  RT+I K
Sbjct: 290 RTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFK 349

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H      + D+  E++A   P  +G               R  R  ++ K+  D+++++
Sbjct: 350 IHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409

Query: 363 VAGME 377
           + G +
Sbjct: 410 IKGYQ 414

---

>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 40/125 (32%), Positives = 69/125 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +++ ++DGF+    I V+ ATNR D LD ALLRPGR DR+V   +PD+  RT+I K
Sbjct: 289 RTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFK 348

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H      + D+  E++A   P  +G               R  R  ++ K+  D+++++
Sbjct: 349 IHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 408

Query: 363 VAGME 377
           + G +
Sbjct: 409 IKGYQ 413

---

>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score = 85.5 bits (210), Expect = 6e-17
 Identities = 44/121 (36%), Positives = 65/121 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ QLL E+DGF+    + V+ ATNR DILD A+LRPGRFDR + V +P   GR +I K
Sbjct: 263 RTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFK 322

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H    K   DV  + +A  T G SG               R  R  ++  +   +I+++
Sbjct: 323 IHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKV 382

Query: 363 V 365
           +
Sbjct: 383 L 383

---

>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
           (p97/CDC48 homolog 2)
          Length = 810

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 40/84 (47%), Positives = 55/84 (65%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    ++V+AATNR + +D AL R GRFDR++ + +PD  GR EIL++H
Sbjct: 330 VSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIH 389

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N K   DV LE +A    GF G
Sbjct: 390 TKNMKLGEDVDLEQVANECHGFVG 413



 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 36/86 (41%), Positives = 51/86 (59%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQ+LTEMDG      + ++ ATNR DI+D A+LRPGR D+ + + +PD   R +I K
Sbjct: 604 RVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFK 663

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
                    AD+ L  +A  T GFSG
Sbjct: 664 ASLRKTPLSADLDLNFLAKNTVGFSG 689

---

>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 824

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLL++MDG E    I+V+  TNR D++D ALLRPGR + Q+ V +PD  GR +ILK+H
Sbjct: 428 VNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIH 487

Query: 189 GSN----KKFDADVSLEVIAMRTPGFSG 260
            +      K D +V LE I+ RT  FSG
Sbjct: 488 TARMREYNKMDPNVDLEDISKRTKNFSG 515

---

>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
           protein homolog) (VCP)
          Length = 807

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 41/84 (48%), Positives = 55/84 (65%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    +IV+ ATNR + +D AL R GRFDR++ + VPD  GR E+L++H
Sbjct: 329 VSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIH 388

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N K   DV LE IA  T G+ G
Sbjct: 389 TKNMKLSDDVDLERIAKDTHGYVG 412



 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 38/86 (44%), Positives = 50/86 (58%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + LNQLLTEMDG      + ++ ATNR DI+D ALLRPGR D+ + + +PD   R +I K
Sbjct: 603 RVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFK 662

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
                     +V L  +A  T GFSG
Sbjct: 663 ACLRKSPIAKNVDLRALARHTQGFSG 688

---

>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1)
          Length = 442

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 46/141 (32%), Positives = 72/141 (51%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++   +P+   R  I++
Sbjct: 311 RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQ 370

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H        DV+ E +A  T  F+G               RRG T ++ ++        
Sbjct: 371 IHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHED-------- 422

Query: 363 VAGMEGTVMTDGKSXSLVAYH 425
              MEG +    K  + + Y+
Sbjct: 423 --HMEGILEVQAKKKANLQYY 441

---

>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 50/129 (38%), Positives = 67/129 (51%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    +IV+AATNR + +D AL R GRFDR+V + +PD  GR EIL++H
Sbjct: 325 VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIH 384

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVA 368
             N K   DV LE +A  T G  G               R+    I  +  D++ID  V 
Sbjct: 385 TKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE--DETIDAEVM 442

Query: 369 GMEGTVMTD 395
                 M D
Sbjct: 443 NSLAVTMDD 451



 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 36/86 (41%), Positives = 53/86 (61%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQ+LTEMDG      + ++ ATNR DI+D A+LRPGR D+ + + +PD + R  ILK
Sbjct: 599 RVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILK 658

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
            +        DV ++ +A  T GFSG
Sbjct: 659 ANLRKSPVAKDVDVDFLAKMTNGFSG 684

---

>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 50/129 (38%), Positives = 67/129 (51%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    +IV+AATNR + +D AL R GRFDR+V + +PD  GR EIL++H
Sbjct: 324 VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIH 383

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVA 368
             N K   DV LE +A  T G  G               R+    I  +  D++ID  V 
Sbjct: 384 TKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE--DETIDAEVM 441

Query: 369 GMEGTVMTD 395
                 M D
Sbjct: 442 NSLAVTMDD 450



 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 38/86 (44%), Positives = 53/86 (61%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQ+LTEMDG      + ++ ATNR DI+D A+LRPGR D+ + + +PD + R  ILK
Sbjct: 598 RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK 657

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
            +        DV LE +A  T GFSG
Sbjct: 658 ANLRKSPVAKDVDLEFLAKMTNGFSG 683

---

>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 50/129 (38%), Positives = 67/129 (51%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    +IV+AATNR + +D AL R GRFDR+V + +PD  GR EIL++H
Sbjct: 324 VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIH 383

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVA 368
             N K   DV LE +A  T G  G               R+    I  +  D++ID  V 
Sbjct: 384 TKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE--DETIDAEVM 441

Query: 369 GMEGTVMTD 395
                 M D
Sbjct: 442 NSLAVTMDD 450



 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 38/86 (44%), Positives = 53/86 (61%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQ+LTEMDG      + ++ ATNR DI+D A+LRPGR D+ + + +PD + R  ILK
Sbjct: 598 RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK 657

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
            +        DV LE +A  T GFSG
Sbjct: 658 ANLRKSPVAKDVDLEFLAKMTNGFSG 683

---

>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 50/129 (38%), Positives = 67/129 (51%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    +IV+AATNR + +D AL R GRFDR+V + +PD  GR EIL++H
Sbjct: 324 VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIH 383

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVA 368
             N K   DV LE +A  T G  G               R+    I  +  D++ID  V 
Sbjct: 384 TKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE--DETIDAEVM 441

Query: 369 GMEGTVMTD 395
                 M D
Sbjct: 442 NSLAVTMDD 450



 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 38/86 (44%), Positives = 53/86 (61%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQ+LTEMDG      + ++ ATNR DI+D A+LRPGR D+ + + +PD + R  ILK
Sbjct: 598 RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK 657

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
            +        DV LE +A  T GFSG
Sbjct: 658 ANLRKSPVAKDVDLEFLAKMTNGFSG 683

---

>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 50/129 (38%), Positives = 67/129 (51%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    +IV+AATNR + +D AL R GRFDR+V + +PD  GR EIL++H
Sbjct: 324 VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIH 383

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIVA 368
             N K   DV LE +A  T G  G               R+    I  +  D++ID  V 
Sbjct: 384 TKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE--DETIDAEVM 441

Query: 369 GMEGTVMTD 395
                 M D
Sbjct: 442 NSLAVTMDD 450



 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 38/86 (44%), Positives = 53/86 (61%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQ+LTEMDG      + ++ ATNR DI+D A+LRPGR D+ + + +PD + R  ILK
Sbjct: 598 RVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK 657

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
            +        DV LE +A  T GFSG
Sbjct: 658 ANLRKSPVAKDVDLEFLAKMTNGFSG 683

---

>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7|
          Length = 435

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 41/123 (33%), Positives = 67/123 (54%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +L+ ++DGF+    I V+ ATNR D LD AL+RPGR DR+V   +PD+ GR  ILK
Sbjct: 299 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILK 358

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H      + D+  +++A   P  +G               R  R   + K+  ++I+++
Sbjct: 359 IHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKV 418

Query: 363 VAG 371
           V G
Sbjct: 419 VKG 421

---

>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 433

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 38/121 (31%), Positives = 67/121 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +L+ ++DGF+    I V+ ATNR D LD AL+RPGR DR++   +PD+ GRT I K
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H  +   + D+  E++A   P  +G               R  R   + K+  ++++++
Sbjct: 357 IHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKV 416

Query: 363 V 365
           +
Sbjct: 417 I 417

---

>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding
           protein homolog SATA)
          Length = 439

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 43/122 (35%), Positives = 67/122 (54%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++   +P+   R  I++
Sbjct: 308 RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQ 367

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H        DV+ E +A  T  F+G               RRG T ++ ++  + I  +
Sbjct: 368 IHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 427

Query: 363 VA 368
            A
Sbjct: 428 QA 429

---

>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Proteasome subunit P50)
          Length = 439

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 43/122 (35%), Positives = 67/122 (54%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++   +P+   R  I++
Sbjct: 308 RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQ 367

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H        DV+ E +A  T  F+G               RRG T ++ ++  + I  +
Sbjct: 368 IHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEV 427

Query: 363 VA 368
            A
Sbjct: 428 QA 429

---

>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 42/121 (34%), Positives = 65/121 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I V+ ATNR DILDSALLRPGR DR++    P+   R +ILK
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L  IA   PG SG               R  R  ++ ++ + ++ ++
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390

Query: 363 V 365
           +
Sbjct: 391 M 391

---

>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding
           protein homolog 10) (TBP10)
          Length = 406

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 42/121 (34%), Positives = 65/121 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I V+ ATNR DILDSALLRPGR DR++    P+   R +ILK
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L  IA   PG SG               R  R  ++ ++ + ++ ++
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390

Query: 363 V 365
           +
Sbjct: 391 M 391

---

>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1)
          Length = 406

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 42/121 (34%), Positives = 65/121 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I V+ ATNR DILDSALLRPGR DR++    P+   R +ILK
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L  IA   PG SG               R  R  ++ ++ + ++ ++
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390

Query: 363 V 365
           +
Sbjct: 391 M 391

---

>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 42/121 (34%), Positives = 65/121 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I V+ ATNR DILDSALLRPGR DR++    P+   R +ILK
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L  IA   PG SG               R  R  ++ ++ + ++ ++
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390

Query: 363 V 365
           +
Sbjct: 391 M 391

---

>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5)
          Length = 406

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 42/121 (34%), Positives = 65/121 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I V+ ATNR DILDSALLRPGR DR++    P+   R +ILK
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L  IA   PG SG               R  R  ++ ++ + ++ ++
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 390

Query: 363 V 365
           +
Sbjct: 391 M 391

---

>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)|
          Length = 461

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 42/121 (34%), Positives = 65/121 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I V+ ATNR DILDSALLRPGR DR++    P+   R +ILK
Sbjct: 265 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 324

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L  IA   PG SG               R  R  ++ ++ + ++ ++
Sbjct: 325 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 384

Query: 363 V 365
           +
Sbjct: 385 M 385

---

>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 82.4 bits (202), Expect = 5e-16
 Identities = 38/121 (31%), Positives = 67/121 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +L+ ++DGF+    I V+ ATNR D LD AL+RPGR DR++   +PD+ GRT I K
Sbjct: 296 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 355

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H  +   + D+  E++A   P  +G               R  R   + K+  ++++++
Sbjct: 356 IHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 415

Query: 363 V 365
           +
Sbjct: 416 I 416

---

>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 82.4 bits (202), Expect = 5e-16
 Identities = 38/121 (31%), Positives = 67/121 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +L+ ++DGF+    I V+ ATNR D LD AL+RPGR DR++   +PD+ GRT I K
Sbjct: 296 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 355

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H  +   + D+  E++A   P  +G               R  R   + K+  ++++++
Sbjct: 356 IHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 415

Query: 363 V 365
           +
Sbjct: 416 I 416

---

>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 82.4 bits (202), Expect = 5e-16
 Identities = 38/121 (31%), Positives = 67/121 (55%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +L+ ++DGF+    I V+ ATNR D LD AL+RPGR DR++   +PD+ GRT I K
Sbjct: 296 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 355

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H  +   + D+  E++A   P  +G               R  R   + K+  ++++++
Sbjct: 356 IHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 415

Query: 363 V 365
           +
Sbjct: 416 I 416

---

>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score = 82.0 bits (201), Expect = 7e-16
 Identities = 48/125 (38%), Positives = 64/125 (51%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL QLL EMDGF+    + ++AATNR DILD A+LRPGRFDR + + +PD  GR EILK
Sbjct: 270 RTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILK 329

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H + K     V L  +A       G               R  R  I   +  ++I +I
Sbjct: 330 IH-TEKMNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKI 388

Query: 363 VAGME 377
               E
Sbjct: 389 TGKKE 393

---

>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score = 82.0 bits (201), Expect = 7e-16
 Identities = 39/86 (45%), Positives = 54/86 (62%)
 Frame = +3

Query: 3    QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
            + +NQ+LTE+DG      I ++AATNR DILD AL RPGR D+ + + +PD++ R  I K
Sbjct: 1054 RVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFK 1113

Query: 183  VHGSNKKFDADVSLEVIAMRTPGFSG 260
                N   + DV +  +A RT GFSG
Sbjct: 1114 AILKNTPLNEDVDIHDMAKRTEGFSG 1139



 Score = 79.0 bits (193), Expect = 6e-15
 Identities = 40/86 (46%), Positives = 55/86 (63%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + ++QLLT MDG + N  ++V+AATNR + +D AL R GRFDR++ + VPD +GR EIL 
Sbjct: 646 RVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILL 705

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
                 K D DV+L  IA    G+ G
Sbjct: 706 TKTKKMKLDPDVNLRKIAKECHGYVG 731

---

>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 419

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 43/122 (35%), Positives = 67/122 (54%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF  +  I V+AATNRADILD AL+R GR DR++    P    R  IL+
Sbjct: 288 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQ 347

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H      +ADV+ E +A  T  F+G               RR  T ++ ++ ++ I ++
Sbjct: 348 IHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 407

Query: 363 VA 368
            A
Sbjct: 408 QA 409

---

>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)|
           (Proteasomal cap subunit)
          Length = 437

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL +LLT+MDGF+      ++ ATNR D LD ALLRPGR DR+V + +P+  GR EI K
Sbjct: 303 RTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFK 362

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H +  K   +   E     + GF+G               R  R  I+  ++  ++ ++
Sbjct: 363 IHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKV 422

Query: 363 --VAGMEGTV 386
             V  +EGT+
Sbjct: 423 AEVKKLEGTI 432

---

>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1157

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 41/86 (47%), Positives = 56/86 (65%)
 Frame = +3

Query: 3    QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
            + +NQ+LT+MDG EG  G+ V+AAT+R D++DSALLRPGR D+ V  D+PD   R +IL+
Sbjct: 918  RVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQ 977

Query: 183  VHGSNKKFDADVSLEVIAMRTPGFSG 260
                N      V+L  +A    GFSG
Sbjct: 978  SVTRNMNVSKSVNLSSVAGECSGFSG 1003

---

>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 429

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 42/122 (34%), Positives = 66/122 (54%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF  +  I V+AATNRADILD AL+R GR DR++    P    R  IL+
Sbjct: 298 RTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQ 357

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H      + DV+ E +A  T  F+G               RR  T ++ ++ ++ I ++
Sbjct: 358 IHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQV 417

Query: 363 VA 368
            A
Sbjct: 418 QA 419

---

>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)|
          Length = 402

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 41/121 (33%), Positives = 64/121 (52%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I V+ ATNR DILD ALLRPGR DR++    P+   R +ILK
Sbjct: 267 RTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILK 326

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L  IA   PG SG               R  R  ++ ++ + ++ ++
Sbjct: 327 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 386

Query: 363 V 365
           +
Sbjct: 387 M 387

---

>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 40/84 (47%), Positives = 55/84 (65%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    +IV+ ATNR + +D AL R GRFDR++ + VPD  GR E+L++H
Sbjct: 328 VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIH 387

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N K   DV LE I+  T G+ G
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVG 411



 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 39/86 (45%), Positives = 50/86 (58%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + LNQLLTEMDG      + ++ ATNR DI+DSALLRPGR D+ + + +PD   R  I K
Sbjct: 602 RVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFK 661

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
                     DV +  +A  T GFSG
Sbjct: 662 ACLRKSPVAKDVDVTALAKYTQGFSG 687

---

>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 40/84 (47%), Positives = 55/84 (65%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    +IV+ ATNR + +D AL R GRFDR++ + VPD  GR E+L++H
Sbjct: 328 VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIH 387

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N K   DV LE I+  T G+ G
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVG 411



 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 39/86 (45%), Positives = 50/86 (58%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + LNQLLTEMDG      + ++ ATNR DI+DSALLRPGR D+ + + +PD   R  I K
Sbjct: 603 RVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFK 662

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
                     DV +  +A  T GFSG
Sbjct: 663 AALRKSPIAKDVDIGALAKYTQGFSG 688

---

>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
          Length = 742

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLLT++DG E    ++++  TNR D+LD ALLRPGR + QV + +PD  GR +IL++H
Sbjct: 348 VNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIH 407

Query: 189 GSNKK----FDADVSLEVIAMRTPGFSG 260
            +  K       D++L+ +A RT  +SG
Sbjct: 408 TNKMKENSFLGTDINLQELAARTKNYSG 435

---

>PRS8_DROME (O18413) 26S protease regulatory subunit 8|
          Length = 405

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 41/121 (33%), Positives = 64/121 (52%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I V+ ATNR DILD ALLRPGR DR++    P+   R +ILK
Sbjct: 270 RTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILK 329

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L  IA   PG SG               R  R  ++ ++ + ++ ++
Sbjct: 330 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 389

Query: 363 V 365
           +
Sbjct: 390 M 390

---

>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 44/84 (52%), Positives = 54/84 (64%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L+ LLTEMDG E   GI+V+AATNR   +D+AL+RPGRFD  + V  PD+  R EIL+VH
Sbjct: 411 LSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVH 470

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N     DV L  IA  T  F+G
Sbjct: 471 TRNMTLGDDVDLRKIAEETDLFTG 494



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
 Frame = +3

Query: 12  NQLLTEMDGFEGNTG---IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +QL T MD  + ++    ++VVA+TNR D +D AL R GRFD  V V  P+   R +IL+
Sbjct: 147 SQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQ 206

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           ++      D  V L+ IA+   G+ G               +R    +     D  I + 
Sbjct: 207 LYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDFKIAKS 266

Query: 363 VAG 371
           V G
Sbjct: 267 VVG 269

---

>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein|
           10) (TBP-10)
          Length = 404

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 42/122 (34%), Positives = 66/122 (54%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+  T + V+AATNR DILD ALLR GR DR++   +P+   R  I++
Sbjct: 273 RTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQ 332

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H        DV+ E +A  T  F+G               RRG T ++ ++  + I  +
Sbjct: 333 IHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYMEGILEV 392

Query: 363 VA 368
            A
Sbjct: 393 QA 394

---

>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 42/122 (34%), Positives = 66/122 (54%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF  +  I V+AATNRADILD AL+R GR DR++    P    R  IL+
Sbjct: 292 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQ 351

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H      + DV+ E +A  T  F+G               RR  T ++ ++ ++ I ++
Sbjct: 352 IHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQV 411

Query: 363 VA 368
            A
Sbjct: 412 QA 413

---

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
           (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 39/84 (46%), Positives = 55/84 (65%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    +IV+ ATNR + +D AL R GRFDR++ + VPD  GR E+L++H
Sbjct: 329 VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIH 388

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N K   DV LE ++  T G+ G
Sbjct: 389 TKNMKLAEDVDLERVSKDTHGYVG 412



 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 39/86 (45%), Positives = 50/86 (58%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + LNQLLTEMDG      + ++ ATNR DI+D ALLRPGR D+ + + +PD   R +I K
Sbjct: 603 RVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFK 662

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
                     DV L  +A  T GFSG
Sbjct: 663 SCLRKSPVAKDVDLRALAKYTQGFSG 688

---

>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)|
           (CIM3 protein) (TAT-binding protein TBY1)
          Length = 405

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 41/133 (30%), Positives = 70/133 (52%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE +  I ++ ATNR DILD ALLRPGR DR++    P V  R EIL+
Sbjct: 270 RTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILR 329

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L  +A +  G SG               R  R  ++ ++ + ++ ++
Sbjct: 330 IHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKV 389

Query: 363 VAGMEGTVMTDGK 401
           +   + T ++  K
Sbjct: 390 MNKNQETAISVAK 402

---

>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)|
           (TAT-binding homolog 3)
          Length = 467

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 39/123 (31%), Positives = 67/123 (54%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +L+T++DGF+    I V+ ATNR + LD ALLRPGR DR+V   +PD+ GR  I +
Sbjct: 331 RTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFR 390

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H  +   +  +  E+I+   P  +G               R  R   + K+   ++D++
Sbjct: 391 IHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKV 450

Query: 363 VAG 371
           ++G
Sbjct: 451 ISG 453

---

>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 40/121 (33%), Positives = 64/121 (52%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I V+ ATNR DILD ALLRPGR DR++    P    R EIL+
Sbjct: 268 RTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILR 327

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H  +      + L+ IA +  G SG               R  R  ++ ++ + ++ ++
Sbjct: 328 IHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKV 387

Query: 363 V 365
           +
Sbjct: 388 L 388

---

>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           Q +NQLL +MDG +    I+V+  TNR D++D ALLRPGR +  + + +PD  GR +ILK
Sbjct: 400 QVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILK 459

Query: 183 VH----GSNKKFDADVSLEVIAMRTPGFSG 260
           +H     SN   + DV +E +A  T  FSG
Sbjct: 460 IHTSRMASNGILENDVDMEELASLTKNFSG 489

---

>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L  LL E+DG E   G+++VAATNR D +D+ALLRPGR DR + V  PDV  R EILK  
Sbjct: 637 LTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILK-- 694

Query: 189 GSNKKFDAD---VSLEVIAMRTPGFSG 260
              KKF+ +   V L  +A RT G+SG
Sbjct: 695 KCTKKFNTEESGVDLHELADRTEGYSG 721



 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
 Frame = +3

Query: 18  LLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSN 197
           LLT MDG      ++V+AATNR + +D AL RPGRFD++V + +PDV  R +IL    S 
Sbjct: 370 LLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSR 429

Query: 198 KKFDADV----SLEVIAMRTPGFSG 260
              D  V    +++ IA +T G+ G
Sbjct: 430 MSSDRHVLDSEAIKYIASKTHGYVG 454

---

>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 424

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 42/122 (34%), Positives = 65/122 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF  +  I V+AATNRADILD AL+R GR DR++    P    R  IL+
Sbjct: 293 RTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQ 352

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H        DV+ E +A  T  F+G               RR  T ++ ++ ++ I ++
Sbjct: 353 IHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 412

Query: 363 VA 368
            A
Sbjct: 413 QA 414

---

>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 45/131 (34%), Positives = 66/131 (50%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ QLL+EMDGF+    I ++AATNR D+LD A+LRPGRFDR + V  P+V GR +I +
Sbjct: 271 RTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFR 330

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         V    +A  T   SG               R  RT +  ++   + +++
Sbjct: 331 IHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDFQSAREKL 390

Query: 363 VAGMEGTVMTD 395
               E    TD
Sbjct: 391 DQDSEPAAATD 401

---

>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 38/86 (44%), Positives = 50/86 (58%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + LNQLLTEMDG      + ++ ATNR DI+D ALLRPGR D+ + + +PD   R +I K
Sbjct: 603 RVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFK 662

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
                     D+ L  +A  T GFSG
Sbjct: 663 ACLRKSPLSKDIDLRALAKHTQGFSG 688



 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 39/84 (46%), Positives = 54/84 (64%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++QLLT MDG +    +IV+ ATNR + +D AL R GRFDR++ + VPD  GR E+L +H
Sbjct: 329 VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLGIH 388

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N K   +V LE I+  T G+ G
Sbjct: 389 TKNMKLAEEVDLERISKDTHGYVG 412

---

>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein|
           homolog 1) (TBP-1)
          Length = 434

 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 38/122 (31%), Positives = 65/122 (53%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF  +  + V+AATNR D+LD ALLR GR DR++   +P    R +IL+
Sbjct: 303 RTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQ 362

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H      D D++ + +A  T  F+G               R G++ +  ++  + I  +
Sbjct: 363 IHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEV 422

Query: 363 VA 368
            A
Sbjct: 423 QA 424

---

>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein|
           homolog 10) (Fragment)
          Length = 389

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 40/121 (33%), Positives = 64/121 (52%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I V+  TNR DILD ALLRPGR DR++    P   GR +ILK
Sbjct: 254 RTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILK 313

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L+ I+ +  G SG               R  R  +S ++ + ++ ++
Sbjct: 314 IHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKV 373

Query: 363 V 365
           +
Sbjct: 374 M 374

---

>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding|
           protein homolog)
          Length = 414

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 39/121 (32%), Positives = 64/121 (52%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGFE    I ++ ATNR DILD ALLRPGR DR++    P+   R +ILK
Sbjct: 279 RTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILK 338

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H         ++L  IA    G SG               R  R  ++ ++++ ++ ++
Sbjct: 339 IHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKV 398

Query: 363 V 365
           +
Sbjct: 399 M 399

---

>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1043

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 9/95 (9%)
 Frame = +3

Query: 3    QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
            + +NQLLT+MDG EG  G+ ++AAT+R D++DSALLRPGR D+ V  ++P    R +IL+
Sbjct: 816  RVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQ 875

Query: 183  V-------HGSNKKF--DADVSLEVIAMRTPGFSG 260
                        KKF  + +  L++IA +T GFSG
Sbjct: 876  AIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSG 910

---

>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 856

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQLLTEMDG E    + ++AATNR DI+D A+LRPGR D+ + V +P    R  ILK
Sbjct: 700 RVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILK 759

Query: 183 V---HGSNKKFDADVSLEVIA 236
               +G+    DADV+LE IA
Sbjct: 760 TITKNGTKPPLDADVNLEAIA 780



 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
 Frame = +3

Query: 15  QLLTEMDGFEG---NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKV 185
           QLLT MD          ++V+ ATNR D LD AL R GRFDR++ + +PD   R  IL+ 
Sbjct: 387 QLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQT 446

Query: 186 HGSNKKFDADVSLEVIAMRTPGFSG 260
                +         +A  TPGF G
Sbjct: 447 LCRKLRLPQAFDFCHLAHLTPGFVG 471

---

>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 36/86 (41%), Positives = 55/86 (63%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL +LL +MDGF+    + ++ ATNR D LD ALLRPGR DR++ +D+P+ + R +ILK
Sbjct: 255 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
           +H        ++  E I   + GF+G
Sbjct: 315 IHAGPITKHGEIDYEAIVKLSDGFNG 340

---

>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 36/86 (41%), Positives = 55/86 (63%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL +LL +MDGF+    + ++ ATNR D LD ALLRPGR DR++ +D+P+ + R +ILK
Sbjct: 255 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
           +H        ++  E I   + GF+G
Sbjct: 315 IHAGPITKHGEIDYEAIVKLSDGFNG 340

---

>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 36/86 (41%), Positives = 55/86 (63%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL +LL +MDGF+    + ++ ATNR D LD ALLRPGR DR++ +D+P+ + R +ILK
Sbjct: 255 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILK 314

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
           +H        ++  E I   + GF+G
Sbjct: 315 IHAGPITKHGEIDYEAIVKLSDGFNG 340

---

>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A|
          Length = 438

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 40/117 (34%), Positives = 62/117 (52%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF  +  + V+AATNR D LD ALLR GR DR++   +P+   R  IL+
Sbjct: 307 RTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILR 366

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSI 353
           +H      D D++ E +A  T  ++G               R+G T I+ +   D I
Sbjct: 367 IHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGI 423

---

>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein) (SKD2 protein)
          Length = 744

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLL+++DG E    I+V+  TNR D++D ALLRPGR + ++ + +PD +GR +IL +H
Sbjct: 351 VNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIH 410

Query: 189 GSNKK----FDADVSLEVIAMRTPGFSG 260
            +  +      ADV ++ +A+ T  FSG
Sbjct: 411 TARMRGHQLLSADVDIKELAVETKNFSG 438

---

>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLL+++DG E    I+V+  TNR D++D ALLRPGR + ++ + +PD +GR +IL +H
Sbjct: 351 VNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIH 410

Query: 189 GSNKK----FDADVSLEVIAMRTPGFSG 260
            +  +      ADV ++ +A+ T  FSG
Sbjct: 411 TARMRGHQLLSADVDIKELAVETKNFSG 438

---

>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLL+++DG E    I+V+  TNR D++D ALLRPGR + ++ + +PD +GR +IL +H
Sbjct: 351 VNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIH 410

Query: 189 GSNKK----FDADVSLEVIAMRTPGFSG 260
            +  +      ADV ++ +A+ T  FSG
Sbjct: 411 TARMRGHQLLSADVDIKELAVETKNFSG 438

---

>FTSH_CHLVU (P56369) Cell division protein ftsH homolog|
          Length = 1720

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 36/83 (43%), Positives = 52/83 (62%)
 Frame = +3

Query: 9    LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
            L+QLL E+DG +G  G+++  ATNR ++LD ALLRPGRFD+ V V +P  + R EIL+ +
Sbjct: 1155 LSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFY 1214

Query: 189  GSNKKFDADVSLEVIAMRTPGFS 257
            G    +   +       RT GF+
Sbjct: 1215 GQTLGYQKTMPWAYFGERTVGFT 1237

---

>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 35/85 (41%), Positives = 54/85 (63%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +TL +LL ++DGF+    + V+ ATNR D LD ALLRPGR DR++ + +P+ + R EILK
Sbjct: 272 RTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILK 331

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFS 257
           +H +      ++  E +   + GFS
Sbjct: 332 IHSNKITKHGEIDFEAVVKLSDGFS 356

---

>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding|
           protein homolog 2)
          Length = 448

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 36/86 (41%), Positives = 53/86 (61%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+    + V+ ATNR + LD ALLRPGR DR++   +PD++ R  I +
Sbjct: 315 RTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQ 374

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
           +H S      DV+LE   M    FSG
Sbjct: 375 IHTSKMTLADDVNLEEFVMTKDEFSG 400

---

>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome|
            biogenesis disorder protein 1)
          Length = 1283

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 40/86 (46%), Positives = 54/86 (62%)
 Frame = +3

Query: 3    QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
            + +NQLLT++DG EG  G+ V+AAT+R D++D ALLRPGR D+ V    PD   R EIL 
Sbjct: 959  RVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILN 1018

Query: 183  VHGSNKKFDADVSLEVIAMRTPGFSG 260
            V   +     DV L+ +A  T  F+G
Sbjct: 1019 VLSDSLPLADDVDLQHVASVTDSFTG 1044

---

>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18|
          Length = 758

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLL +MDG +    I+V+  TNR D++DSALLRPGRF+ QV + +PD +GR +I  + 
Sbjct: 372 VNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQ 431

Query: 189 ----GSNKKFDADVSLEVIAMRTPGFSG 260
                 N     DV+L  +A  T  FSG
Sbjct: 432 TKKMRENNMMSDDVNLAELAALTKNFSG 459

---

>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLL++MDG +    I+V+  TNR D++D+ALLRPGRF+ Q+ + +PD +GR +I  +H
Sbjct: 409 VNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIH 468

Query: 189 ----GSNKKFDADVSLEVIAMRTPGFSG 260
                 N    +DV+ + ++  T  F+G
Sbjct: 469 TKKLTENGILSSDVNFDELSTLTKNFTG 496

---

>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 855

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +NQLLTEMDG E    + ++AATNR DI+D A+LRPGR D+ + V +P    R  ILK
Sbjct: 699 RVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILK 758

Query: 183 V---HGSNKKFDADVSLEVIA 236
               +G+    D DV+LE IA
Sbjct: 759 TITKNGTKPPLDEDVNLETIA 779



 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
 Frame = +3

Query: 15  QLLTEMDGFEG---NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKV 185
           QLLT MD          ++V+ ATNR D LD AL R GRFDR+V + +PD   R  IL+ 
Sbjct: 386 QLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQT 445

Query: 186 HGSNKKFDADVSLEVIAMRTPGFSG 260
                +     +   +A  TPGF G
Sbjct: 446 LCRKLRLPETFNFCHLAHLTPGFVG 470

---

>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++ LL  MDG +G   ++V+ ATNR D LD AL RPGRFDR++   +PD+  R +IL +H
Sbjct: 517 VSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDIH 576

Query: 189 GSNKKFDADV--SLEVIAMRTPGFSG 260
            S  + +  +  +L+ IA RT G+ G
Sbjct: 577 TSKWEENKPIPETLDAIAERTSGYCG 602

---

>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive|
           fusion protein 2) (NEM-sensitive fusion protein 2)
           (dNsf-2)
          Length = 752

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLL ++DG E    I+V+  TNR D++D ALLRPGR + Q+ + +P+ +GR +IL +H
Sbjct: 356 VNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIH 415

Query: 189 GSN----KKFDADVSLEVIAMRTPGFSG 260
                   K  +DV    IA +T  FSG
Sbjct: 416 TKRMRDFNKIASDVDNNEIAAKTKNFSG 443

---

>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEI 176
           +TL +LL +MDGF+  G T II+  ATNR D LD ALLRPGR DR++ + +P+  GR EI
Sbjct: 254 RTLMELLNQMDGFDYLGQTKIIM--ATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEI 311

Query: 177 LKVHGSNKKFDADVSLEVIAMRTPGFSG 260
           LK+H        ++  E +   T G +G
Sbjct: 312 LKIHLEKVSKQGEIDYEALVKLTDGTNG 339

---

>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive|
           fusion protein 1) (NEM-sensitive fusion protein 1)
           (dNsf-1) (Protein comatose)
          Length = 745

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           +NQLLT++DG +    I+V+  TNR D++D ALLRPGR + Q+ + +P+ +GR +IL +H
Sbjct: 351 VNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIH 410

Query: 189 GSN----KKFDADVSLEVIAMRTPGFSG 260
                   K + DV  + IA  T  FSG
Sbjct: 411 TKRMREFNKINDDVDNKEIAALTKNFSG 438

---

>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein|
           6) (TBP-6)
          Length = 405

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 36/85 (42%), Positives = 53/85 (62%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+ N  + V+AATNR DILD ALLR GR DR++   +P+   R  I++
Sbjct: 292 RTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQ 351

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFS 257
           +H        DV+ E +A R P  S
Sbjct: 352 IHSRKMNVSPDVNYEELA-RCPTIS 375

---

>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding|
           homolog 5)
          Length = 437

 Score = 72.0 bits (175), Expect = 7e-13
 Identities = 35/121 (28%), Positives = 64/121 (52%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+    + V+ ATN+ + LD AL+RPGR DR++  + PD+  + +IL 
Sbjct: 304 RTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILG 363

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H S      DV+LE +       SG               R  R  +++++   + +R+
Sbjct: 364 IHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERV 423

Query: 363 V 365
           +
Sbjct: 424 M 424

---

>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+    + V+ ATNR + LD AL+RPGR DR++   +PD + +  I +
Sbjct: 307 RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQ 366

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H S      DV+L+ + M     SG               R  R  +++++   S + +
Sbjct: 367 IHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENV 426

Query: 363 V-AGMEGT 383
           +    EGT
Sbjct: 427 LYKKQEGT 434

---

>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+    + V+ ATNR + LD AL+RPGR DR++   +PD + +  I +
Sbjct: 307 RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQ 366

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H S      DV+L+ + M     SG               R  R  +++++   S + +
Sbjct: 367 IHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENV 426

Query: 363 V-AGMEGT 383
           +    EGT
Sbjct: 427 LYKKQEGT 434

---

>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+    + V+ ATNR + LD AL+RPGR DR++   +PD + +  I +
Sbjct: 307 RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQ 366

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H S      DV+L+ + M     SG               R  R  +++++   S + +
Sbjct: 367 IHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENV 426

Query: 363 V-AGMEGT 383
           +    EGT
Sbjct: 427 LYKKQEGT 434

---

>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)|
           (TBP-7)
          Length = 418

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 40/119 (33%), Positives = 57/119 (47%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L +LL +MDGF+ N  + V+ ATNRAD LD ALLRPGR DR++   +PD R +  I    
Sbjct: 289 LLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTI 348

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIV 365
            S      +V LE    R    SG               R  R  + +K+ + +   ++
Sbjct: 349 TSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVI 407

---

>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7)
          Length = 418

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 40/119 (33%), Positives = 57/119 (47%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L +LL +MDGF+ N  + V+ ATNRAD LD ALLRPGR DR++   +PD R +  I    
Sbjct: 289 LLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTI 348

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIV 365
            S      +V LE    R    SG               R  R  + +K+ + +   ++
Sbjct: 349 TSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVI 407

---

>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B|
          Length = 414

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 40/119 (33%), Positives = 58/119 (48%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L +LL +MDGF+ +T + V+ ATNR D LD ALLRPGR DR++   +PD R +  +    
Sbjct: 285 LLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTV 344

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIV 365
            S      DV LE    R    SG               R  R  + +K+++ +   +V
Sbjct: 345 CSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVV 403

---

>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 35/116 (30%), Positives = 60/116 (51%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+    + V+ ATNR + LD AL+RPGR DR++   +PD + +  I +
Sbjct: 307 RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQ 366

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDS 350
           +H S      DV+L+ + M     SG               R  R  +++++   S
Sbjct: 367 IHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 422

---

>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 35/121 (28%), Positives = 61/121 (50%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+    + V+ ATNR + LD AL+RPGR DR++   +PD + +  I  
Sbjct: 306 RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFT 365

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H S      DV+L  + M     SG               R  R  +++++   S + +
Sbjct: 366 IHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESV 425

Query: 363 V 365
           +
Sbjct: 426 L 426

---

>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7) (CIP21)
          Length = 418

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 37/84 (44%), Positives = 47/84 (55%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L +LL +MDGF+ N  + V+ ATNRAD LD ALLRPGR DR++   +PD R +  I    
Sbjct: 289 LLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTI 348

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
            S      +V LE    R    SG
Sbjct: 349 TSKMNLSEEVDLEDYVARPDKISG 372

---

>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2|
          Length = 1091

 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++ LL  MDG +    I+V+ ATNR D +D AL RPGRFDR+    +PD   R EILK+H
Sbjct: 383 VSTLLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILKIH 442

Query: 189 GSN-KKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRR----------------GR 317
             +      D  LE +A    G+ G               RR                  
Sbjct: 443 TRDWNPKPLDTFLEELAENCVGYRGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSS 502

Query: 318 TGISSKEIDDSIDRIVAGMEGTVMTDGKSXSLV 416
             IS+K+ + ++ +++   +  V + G++ S V
Sbjct: 503 INISAKDFEVAMQKMIPASQRAVTSPGQALSTV 535

---

>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAY4)
          Length = 1024

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
 Frame = +3

Query: 9    LNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE-IL 179
            ++QLL E+DG    G  G+ VV ATNR D+LD ALLRPGRFD+ + + + D   + + I+
Sbjct: 841  VSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIM 900

Query: 180  KVHGSNKKFDADVSLEVIAMRTP 248
            +      +  ADVSLE I+ R P
Sbjct: 901  EALTRKFRLAADVSLEAISKRCP 923

---

>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
 Frame = +3

Query: 9    LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
            ++ LL  MDG +    I+V+ ATNR D +D AL RPGRFDR+    +PD   R EILK+H
Sbjct: 552  VSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIH 611

Query: 189  GSN-KKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRR----------------GR 317
              +      D  LE +A    G+ G               RR                  
Sbjct: 612  TRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSS 671

Query: 318  TGISSKEIDDSIDRIVAGMEGTVMTDGKSXSLV 416
              IS+K+ + ++ +++   +  V + G++ S V
Sbjct: 672  INISAKDFEVAMQKMIPASQRAVTSPGQALSTV 704

---

>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)|
          Length = 415

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 36/84 (42%), Positives = 47/84 (55%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L +LL +MDGF+  T + V+ ATNRAD LD ALLRPGR DR++   +PD R +  I    
Sbjct: 286 LLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTI 345

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
            +      +V LE    R    SG
Sbjct: 346 TAKMNLSEEVDLEEFVARPDRVSG 369

---

>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7|
          Length = 837

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
 Frame = +3

Query: 15  QLLTEMDGF--EGNTG--IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           QLLT MD    E   G  +I++ ATNR D LD+AL R GRFDR++ ++VP+   R  ILK
Sbjct: 329 QLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILK 388

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
               N K D  +    +A  TPGF G
Sbjct: 389 KMSDNLKIDGAIDFAKLAKLTPGFVG 414



 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +N LLTE+DG     GI V+ ATNR D++D A+LRPGR D+ + +++P+   + +I+K
Sbjct: 652 RVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIK 711

Query: 183 V----HGSNKKFDADVSLEVIAMRTPGFSG 260
                HG+    D D    +   +   FSG
Sbjct: 712 TLTKSHGTPLSSDVDFEEIIRNEKCNNFSG 741

---

>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome|
           AAA-ATPase subunit RPT3) (Regulatory particle triple-A
           ATPase subunit 3)
          Length = 408

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 39/112 (34%), Positives = 54/112 (48%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L +LL +MDGF+    + V+ ATNRAD LD ALLRPGR DR++   +PD R +  + +V 
Sbjct: 279 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC 338

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEID 344
            S      +V LE    R    S                R+ R  I  K+ +
Sbjct: 339 TSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 390

---

>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding|
           protein homolog 2)
          Length = 403

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 40/112 (35%), Positives = 55/112 (49%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L +LL +MDGF+ +  + V+ ATNR D LD ALLRPGR DR++   +PD R +  I +V 
Sbjct: 274 LMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVI 333

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEID 344
            S      +V LE    R    SG               R+ R  I  K+ +
Sbjct: 334 TSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFE 385

---

>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2|
          Length = 1040

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++ LL  MDG +    I+V+ ATNR D +D AL RPGRFDR+    +PD   R EILK+H
Sbjct: 207 VSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIH 266

Query: 189 GSN-KKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRR----------------GR 317
             +      D+ LE +A    G+ G               RR                  
Sbjct: 267 TRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSS 326

Query: 318 TGISSKEIDDSIDRIVAGMEGTVMTDGKSXSLV 416
             IS+K+ + ++ +I    +  V + G++ S +
Sbjct: 327 ITISAKDFEAALQKIRPASQRAVTSPGQALSAI 359

---

>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog|
          Length = 389

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV-DVPDVRGRTEILKV 185
           L +LLT+MDGF+    + V+ ATNRAD LD ALLRPGR DR++      D R R  + + 
Sbjct: 258 LIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQT 317

Query: 186 HGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIV 365
             +      +V L+   MR    SG               R+ R  I   +I+++  R V
Sbjct: 318 ITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAV 377

---

>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)|
           (TAT-binding homolog 2)
          Length = 428

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L +LLT+MDGF+ +T + V+ ATNRAD LD ALLRPGR DR+  ++ P +R R E   + 
Sbjct: 296 LIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRK--IEFPYLRDRRERRLIF 353

Query: 189 G---SNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDS 350
           G   S      +  L+ + +R    SG               R+ R  I   +++++
Sbjct: 354 GTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEA 410

---

>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4|
          Length = 443

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 34/121 (28%), Positives = 60/121 (49%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           +T+ +LL ++DGF+    + V+ ATNR + LD AL+RPGR DR++   +PD + +  I +
Sbjct: 310 RTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQ 369

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
           +H S      +V+LE         SG               R  R  ++ ++   S + +
Sbjct: 370 IHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENV 429

Query: 363 V 365
           +
Sbjct: 430 L 430

---

>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog|
          Length = 413

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 38/112 (33%), Positives = 54/112 (48%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L +LL +MDGF+    + V+ ATNRAD LD ALLRPGR DR++   +PD R +  + +V 
Sbjct: 284 LMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVC 343

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEID 344
            +      +V LE    R    S                R+ R  I  K+ +
Sbjct: 344 TAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFE 395

---

>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog|
          Length = 387

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 35/121 (28%), Positives = 59/121 (48%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + L +LL +MDGF+    + V+ ATNRAD +D ALLRPGR DR++   +PD R +  +  
Sbjct: 256 RVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFN 315

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRI 362
              S    +  V +E +  R    S                R  R  ++ ++ +++  ++
Sbjct: 316 AITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKV 375

Query: 363 V 365
           V
Sbjct: 376 V 376

---

>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog|
          Length = 423

 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE---IL 179
           L +LL +MDGFE ++ + V+ ATNRAD LD ALLRPGR DR+  ++ P +R R E   I 
Sbjct: 290 LLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRK--IEFPSLRDRRERRLIF 347

Query: 180 KVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGI 326
               S      +V L+ + +R    SG               R+ R  I
Sbjct: 348 STIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNI 396

---

>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           LNQ L E+DG E    + V+ ATNR D++D A LRPGRF   + V +P+   R  ILK  
Sbjct: 649 LNQFLVELDGGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAI 707

Query: 189 GSNKKFDADVSLEVIAMRT-PGFSG 260
              K  D  V L+ IA     GFSG
Sbjct: 708 ARKKPIDPSVDLDGIAKNNCEGFSG 732



 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTG-----------IIVVAATNRADILDSALLRPGRFDRQVSVDVPD 155
           + QLLT MDG  GN G           ++V+ ATNR D LD AL R GRF+ ++++  PD
Sbjct: 354 VTQLLTCMDG-PGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPD 412

Query: 156 VRGRTEILKVHGSNKKFDADVSLEVIAMRTPGFSG 260
              R EIL V     + +     + IA  TPGF G
Sbjct: 413 EDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVG 447

---

>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)|
          Length = 890

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           L Q L  MDG++    +I++ ATNR + LD A++RPGRFDRQ+    P    R +IL++ 
Sbjct: 486 LMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIF 545

Query: 189 GSN-KKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI--DDSIDR 359
             N K    D +  ++A R+ G +G                  R    +  +  +D+ DR
Sbjct: 546 LRNTKALVDDTTKTMMAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDR 605

Query: 360 ----------IVAGMEGTVMTDGK-SXSLVAYHEVGHAVCGTLTP 461
                     I++  E   +  GK      AYHE G A+  TL P
Sbjct: 606 ALERVSRIRHIISNYE---LAFGKYDFYRTAYHEAGIALIHTLLP 647

---

>TBP7_YEAST (P40340) TAT-binding homolog 7|
          Length = 1379

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
 Frame = +3

Query: 9   LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           ++ LL  MDG +    +IV+ ATNR D +D AL RPGRFDR+    +PDV+ R +IL++ 
Sbjct: 539 VSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQI- 597

Query: 189 GSNKKFDADVS---LEVIAMRTPGFSG 260
              +K+ + +S   ++ +A  T G+ G
Sbjct: 598 -QTRKWSSPLSTNFIDKLAFLTKGYGG 623

---

>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1021

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = +3

Query: 9    LNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR-TEILK 182
            ++QLL E+DG   G  G+ V+ ATNR D+LD ALLRPGRFD+ + + + D   +   IL+
Sbjct: 845  VSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILR 904

Query: 183  VHGSNKKFDADVSLEVIAMRTP 248
                    D DVSL+ +A   P
Sbjct: 905  ALTRKFTLDPDVSLDDLAASCP 926

---

>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c|
          Length = 609

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR--------T 170
           QLL+E+DG EG   +IV+ A+NR D++D A+LRPGR D ++ ++ PD            T
Sbjct: 395 QLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLT 454

Query: 171 EILKVHGSN-KKFDADVSLEVIAM 239
           E L VH  +  +FD D S  + AM
Sbjct: 455 EFLPVHADDLAEFDGDRSACIKAM 478

---

>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175|
          Length = 609

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR--------T 170
           QLL+E+DG EG   +IV+ A+NR D++D A+LRPGR D ++ ++ PD            T
Sbjct: 395 QLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLT 454

Query: 171 EILKVHGSN-KKFDADVSLEVIAM 239
           E L VH  +  +FD D S  + AM
Sbjct: 455 EFLPVHADDLAEFDGDRSACIKAM 478

---

>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1459

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
 Frame = +3

Query: 9    LNQLLTEMDGFEGNT----GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV-RGRTE 173
            ++QLL E+DG  G      G+ V+ ATNR D+LD+ALLRPGRFD+ + + V D  R +  
Sbjct: 1152 VSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQAT 1211

Query: 174  ILKVHGSNKKFDADVSLEVIAMRTP 248
            IL+          DVSL+ +A + P
Sbjct: 1212 ILEALTRKFALHPDVSLDRVAEQLP 1236

---

>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1135

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
 Frame = +3

Query: 9    LNQLLTEMDGF---EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 179
            ++QLL E+DG    EG  G+ VV ATNR D+LD ALLRPGRFD+ + + + D   +   +
Sbjct: 935  VSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKI 994

Query: 180  KVHGSNKKFDADVSLEV 230
             +    +KF  D S+++
Sbjct: 995  -IQALTRKFQLDPSVDL 1010

---

>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1017

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
 Frame = +3

Query: 9    LNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR-TEILK 182
            ++QLL E+DG   +  G+ ++ ATNR D+LD ALLRPGRFD+ + + + D R +   I++
Sbjct: 840  VSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMR 899

Query: 183  VHGSNKKFDADVSLEVIAMRTP-GFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDR 359
                  K  +D++ + +    P  ++G                R      SKEID+ +D+
Sbjct: 900  ALTRKFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAMTR-----ISKEIDEKVDK 954

---

>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)|
          Length = 69

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
 Frame = +3

Query: 57  IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIA 236
           ++V+A TNR D+LD AL+RPGRF RQ+    P ++GR+ I KVH    K D  ++ + +A
Sbjct: 1   VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60

Query: 237 MR----TPG 251
            +    TPG
Sbjct: 61  RKLAVLTPG 69

---

>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316|
          Length = 609

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR--------T 170
           QLL+E+DG EG   +IV+ A+NR D++D A+LRPGR D ++ ++ PD            T
Sbjct: 395 QLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLT 454

Query: 171 EILKVHGSN-KKFDADVSLEVIAM 239
           E L VH  +  +FD D +  + AM
Sbjct: 455 ESLPVHADDLTEFDGDRAACIKAM 478

---

>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)|
          Length = 448

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEIL 179
           +T+ +LL ++DGF+     I V+ ATNR   LD AL+RPGR DR++  + PD   + +I 
Sbjct: 313 RTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIF 372

Query: 180 KVHGSNKKFDADVSLEVIAMRTPGFSG 260
            +H S      DV+LE +       SG
Sbjct: 373 TIHTSKMNLGEDVNLEELIQCKDDLSG 399

---

>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1381

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
 Frame = +3

Query: 9    LNQLLTEMDGFEGNTG----IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEI 176
            ++QLL E+DG  G  G    + V+ ATNR D+LD ALLRPGRFD+ + + V D   + ++
Sbjct: 1113 VSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDK-QV 1171

Query: 177  LKVHGSNKKF--DADVSLEVIAMRTP 248
              +    +KF     VSL  +A R P
Sbjct: 1172 TIMEALTRKFTLHPTVSLRSVAERLP 1197

---

>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
 Frame = +3

Query: 9    LNQLLTEMDGFEGNT----GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR-TE 173
            ++QLL E+DG  G      G+ V+ ATNR D+LD ALLRPGRFD+ + + V D   +  +
Sbjct: 1116 VSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLK 1175

Query: 174  ILKVHGSNKKFDADVSLEVIAMRTP 248
            IL+           VSL  +A + P
Sbjct: 1176 ILEALTRKFTLHPSVSLHSVAQQLP 1200

---

>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 978

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3    QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR-GRTEIL 179
            + ++QLL E+DG      + V+ ATNR D+LD ALLRPGRFD+ V V   + R  +  +L
Sbjct: 822  RVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVL 881

Query: 180  KVHGSNKKFDADVSL 224
                   K +A VSL
Sbjct: 882  SAITRKFKLEASVSL 896

---

>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS5)
          Length = 1165

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
 Frame = +3

Query: 9    LNQLLTEMDGF---EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR-TEI 176
            ++QLL E+DG    +G  G+ VV ATNR D+LD ALLRPGRFD+ + + V D   + ++I
Sbjct: 941  VSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKI 1000

Query: 177  LKVHGSNKKFDADVSLEVIAMRTP 248
            ++           V L+ +A   P
Sbjct: 1001 MEALSRKFHLHPSVDLDKVAESCP 1024

---

>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 981

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3    QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR-GRTEIL 179
            + ++QLL E+DG      + V+ ATNR D+LD ALLRPGRFD+ V V   + R  +  +L
Sbjct: 825  RVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVL 884

Query: 180  KVHGSNKKFDADVSL 224
                   K +A VSL
Sbjct: 885  SAITRKFKLEASVSL 899

---

>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
 Frame = +3

Query: 12  NQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 170
           ++LL +MDG  G       +  ++V+AATN    +D AL R  R ++++ + +P  +GR 
Sbjct: 328 SELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRA 385

Query: 171 EILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 341
           E+LK+     + D D+ LE IA +T G+SG               RR   G+S +EI
Sbjct: 386 ELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRINGLSPEEI 442

---

>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
 Frame = +3

Query: 12  NQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 170
           ++LL +MDG  G       +  ++V+AATN    +D AL R  R ++++ + +P  +GR 
Sbjct: 328 SELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRA 385

Query: 171 EILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 341
           E+LK+     + D DV LE IA +T G+SG               RR   G+S +EI
Sbjct: 386 ELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRINGLSPEEI 442

---

>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1000

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = +3

Query: 9    LNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV-RGRTEILK 182
            ++QLL E+DG   G  G+ V+ ATNR D+LD ALLRPGRFD+ + + + D  + +  I+K
Sbjct: 824  VSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDKKQANIIK 883

Query: 183  VHGSNKKFDADVSLEVIAMRTP 248
                    ++ + +  IA + P
Sbjct: 884  ALTRKFTLESGIDILDIAKKCP 905

---

>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1198

 Score = 58.9 bits (141), Expect = 6e-09
 Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
 Frame = +3

Query: 9    LNQLLTEMDGFEGNT-----GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV-RGRT 170
            ++QLL E+DG  G       G+ VV ATNR D+LD ALLRPGRFD+ + + + D    ++
Sbjct: 961  VSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQS 1020

Query: 171  EILKVHGSNKKFDADVSLEVIAMR 242
            +IL+      K   +V L  IA R
Sbjct: 1021 KILEALTRKFKLADNVDLYEIAKR 1044

---

>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS8)
          Length = 1030

 Score = 58.9 bits (141), Expect = 6e-09
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
 Frame = +3

Query: 9    LNQLLTEMDGFEGNT-GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV-RGRTEILK 182
            ++QLL E+DG   +  G+ V+ ATNR D+LD ALLRPGRFD+ + + +PD    +  IL+
Sbjct: 854  VSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILE 913

Query: 183  VHGSNKKFDADVSLEVIAMRTP 248
                    D DV L  +A   P
Sbjct: 914  ALTRKFVLDNDVKLIELAKLCP 935

---

>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 980

 Score = 58.5 bits (140), Expect = 8e-09
 Identities = 29/77 (37%), Positives = 47/77 (61%)
 Frame = +3

Query: 3    QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
            + ++QLL E+DG      + V+ ATNR D+LD ALLRPGRFD+ V V   + R  +++  
Sbjct: 824  RVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRA-SQLRV 882

Query: 183  VHGSNKKFDADVSLEVI 233
            +    +KF  + S+ ++
Sbjct: 883  LSAITRKFKLEPSVSLV 899

---

>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
 Frame = +3

Query: 12  NQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 170
           ++LL +MDG  G       +  ++V+AATN    +D AL R  R ++++ + +P  +GR 
Sbjct: 330 SELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRA 387

Query: 171 EILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 341
           E+LK++    + D D+ LE IA +  G+SG               RR   G+S +EI
Sbjct: 388 ELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEI 444

---

>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494|
          Length = 371

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 27/86 (31%), Positives = 49/86 (56%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +N LLTE+DG + N G++ +AATN   +LD A+    RF+ ++   +P+   R +I++
Sbjct: 240 EVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPNDEERLKIME 297

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
           ++          +L+    +T GFSG
Sbjct: 298 LYAKKMPLPVKANLKEFVEKTKGFSG 323

---

>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 28/86 (32%), Positives = 47/86 (54%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +N LLTEMDG   N G++ + ATN  ++LD+A+    RF+ ++   +P    R  +L+
Sbjct: 243 EVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPGDDERRMMLE 300

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
            +      D D S++ +   T G SG
Sbjct: 301 KYIETMPLDVDFSVDKLVKLTKGMSG 326

---

>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 948

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
 Frame = +3

Query: 3    QTLNQLLTEMDGF--EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV-PDVRGRTE 173
            + ++QLL E+D    + N  + V+ ATNR D+LD +LLRPGRFD+ V + +      +  
Sbjct: 775  RVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKAS 834

Query: 174  ILKVHGSNKKFDADVSLEVIAMRT-PGFSG 260
            +L+      K D  + L  IA    P F+G
Sbjct: 835  MLRALTKTFKLDETIDLNEIAKNCHPNFTG 864

---

>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  QLLTEMDGFEG--NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           Q ++  DG +   N  +I++ ATNR   LDSA+LR  R   +  ++ P+VR R +ILK+ 
Sbjct: 219 QFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLI 276

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N+  ++ V L  IA +T GFSG
Sbjct: 277 LENENVESAVELSEIAKQTDGFSG 300

---

>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 173
           +LL +MDG  G +        ++V+AATN    +D AL R  R ++++ + +P  +GR E
Sbjct: 329 ELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREE 386

Query: 174 ILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 341
           +L+++    +   DV++E IA    G+SG               RR   G++ +EI
Sbjct: 387 LLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEI 442

---

>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 26/86 (30%), Positives = 44/86 (51%)
 Frame = +3

Query: 3   QTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           + +N LLTEMDG   N G++ + ATN  ++LD A+    RF+ ++   +PD   R  +L+
Sbjct: 243 EVVNALLTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPDDEERKLMLE 300

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
            +        D  ++ +   T   SG
Sbjct: 301 KYIETMPLKVDFPVDKLVKLTREMSG 326

---

>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
 Frame = +3

Query: 12  NQLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 170
           ++LL +MDG  G +        ++V+AATN    +D AL R  R ++++ + +P++ GR 
Sbjct: 356 SELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPEIDGRE 413

Query: 171 EILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 341
           ++L+++        D+ L+ IA +  G+SG               RR   G+  +EI
Sbjct: 414 QLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMRRRIQGLRPEEI 470

---

>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 173
           +LL +MDG  G +        ++V+AATN    +D AL R  R ++++ + +P  +GR E
Sbjct: 332 ELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREE 389

Query: 174 ILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 341
           +L++     +   DV L  IA    G+SG               RR   G++ +EI
Sbjct: 390 LLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445

---

>MSP1_CAEEL (P54815) Protein MSP1 homolog|
          Length = 342

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTG-IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHG 191
           Q +T  DGF  +   IIV+ ATNR   +D+A+LR  R   +  V VP+ + R++IL V  
Sbjct: 206 QFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVPVPNAKQRSQILNVIL 263

Query: 192 SNKKFDADVSLEVIAMRTPGFSG 260
            N+K +  V+L  IA    G SG
Sbjct: 264 RNEKINNTVNLGEIAQAAEGLSG 286

---

>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 173
           +LL +MDG  G +        ++V+AATN    +D AL R  R ++++ + +P  +GR E
Sbjct: 332 ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREE 389

Query: 174 ILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 341
           +L++     +   DV+L  IA    G+SG               RR   G++ +EI
Sbjct: 390 LLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445

---

>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 173
           +LL +MDG  G +        ++V+AATN    +D AL R  R ++++ + +P  +GR E
Sbjct: 332 ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREE 389

Query: 174 ILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 341
           +L++     +   DV+L  IA    G+SG               RR   G++ +EI
Sbjct: 390 LLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI 445

---

>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a|
          Length = 437

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  QLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH- 188
           + L +M G    N G +V+ ATN   +LDSA+ R  RF++++ + +P+   R ++ ++H 
Sbjct: 250 EFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHL 307

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
           GS      D ++  +A +T G+SG
Sbjct: 308 GSTPHNLTDANIHELARKTEGYSG 331

---

>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)|
           (VPS4-1)
          Length = 437

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  QLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH- 188
           + L +M G    N G +V+ ATN   +LDSA+ R  RF++++ + +P+   R ++ ++H 
Sbjct: 250 EFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHL 307

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
           GS      D ++  +A +T G+SG
Sbjct: 308 GSTPHNLTDANIHELARKTEGYSG 331

---

>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  QLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH- 188
           + L +M G    N GI+V+ ATN   +LDSA+ R  RF++++ + +P+   R  + ++H 
Sbjct: 257 EFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHL 314

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
           GS +    +   + +  +T G+SG
Sbjct: 315 GSTQNSLTEADFQELGRKTDGYSG 338

---

>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           Q ++  DG + +    +IV+ ATNR   LDSA++R  R   +  ++ P ++ R  ILK+ 
Sbjct: 215 QFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLI 272

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N+  D  V L  +A  T GFSG
Sbjct: 273 LKNENVDRHVDLLEVAQETDGFSG 296

---

>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           Q ++  DG + +    +IV+ ATNR   LDSA++R  R   +  ++ P ++ R  ILK+ 
Sbjct: 215 QFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLI 272

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N+  D  V L  +A  T GFSG
Sbjct: 273 LKNENVDRHVDLLEVAQETDGFSG 296

---

>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           Q ++  DG + +    +IV+ ATNR   LDSA++R  R   +  ++ P ++ R  ILK+ 
Sbjct: 215 QFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLI 272

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
             N+  D  V L  +A  T GFSG
Sbjct: 273 LKNENVDRHVDLLEVAQETDGFSG 296

---

>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +3

Query: 15  QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGS 194
           + +T  DG   N  ++++ ATNR + +D A LR  R  ++  V +P    R +IL V   
Sbjct: 215 EFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLK 272

Query: 195 NKKFDAD-VSLEVIAMRTPGFSG 260
           + K D D   L++IA  T GFSG
Sbjct: 273 DTKLDEDEFDLQLIADNTKGFSG 295

---

>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  QLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH- 188
           + L +M G    N GI+V+ ATN   +LDSA+ R  RF++++ + +P+   R  + K+H 
Sbjct: 257 EFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHL 314

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
           G+ +    +     +  +T G+SG
Sbjct: 315 GTTQNSLTEADFRELGRKTDGYSG 338

---

>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
 Frame = +3

Query: 12  NQLLTEMDGFEGNTG--------IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 167
           ++LL ++DG              ++V+AATN    +D AL R  R ++++ + +PD   R
Sbjct: 361 SELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESR 418

Query: 168 TEILKVHGSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEI 341
             ++ ++    +  +DV++E +A RT G+SG               RR   G +  EI
Sbjct: 419 KALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEI 476

---

>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
 Frame = +3

Query: 12  NQLLTEMDGFEG---NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 182
           ++ L +MDG +    +  + V+AATN    LD AL R  RF++++ + +PD+  R ++++
Sbjct: 315 SEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIE 372

Query: 183 VHGSNKKFDADVSLEVIAMRTPGFSG 260
                     +++ + +A RT GFSG
Sbjct: 373 KSMEGTPKSDEINYDDLAARTEGFSG 398

---

>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A|
          Length = 380

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  QLLTEMDGFEG--NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           Q ++  DG +   N+ ++V+ ATNR   +D+A+LR  R      V +P+   R EIL++ 
Sbjct: 218 QFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLI 275

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
            S +     ++L+ IA ++ G+SG
Sbjct: 276 LSGENLSNAINLKEIASQSEGYSG 299

---

>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)|
          Length = 497

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +3

Query: 57  IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH------GSNKKFDADV 218
           + VVA  N  D+L   ++R GRFD    +D+P++  R EI K+H       S K FD   
Sbjct: 361 VFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFD--- 417

Query: 219 SLEVIAMRTPGFSG 260
             + +A  +  FSG
Sbjct: 418 -YKKLAQLSESFSG 430

---

>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46|
          Length = 506

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
 Frame = +3

Query: 42  EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH--GSNKKFDAD 215
           E  + + VVA  N  D L   LLR GRFD    + +PD++ R  I KVH      K  + 
Sbjct: 372 EKKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWST 431

Query: 216 VSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDSIDRIV 365
              E+++ ++  FSG                  R   ++ +I +S+ R+V
Sbjct: 432 YDTEILSAQSNRFSGAEIEESIYEAMHIAFNENRE-FTTSDILNSLKRVV 480

---

>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13|
           protein) (DOA4-independent degradation protein 6)
          Length = 437

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
 Frame = +3

Query: 15  QLLTEMDGFEGNT-GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH- 188
           +LL +M+G   ++ G++V+ ATN    LDSA+ R  RF+R++ + +PD+  RT + +++ 
Sbjct: 255 ELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINV 312

Query: 189 GSNKKFDADVSLEVIAMRTPGFSG 260
           G             +   T G+SG
Sbjct: 313 GDTPCVLTKEDYRTLGAMTEGYSG 336

---

>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
 Frame = +3

Query: 15  QLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH- 188
           + L +M+G  +  +G++V+ ATN    LDSA+ R  RF++++ + +P+   R  + +++ 
Sbjct: 251 EFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNV 308

Query: 189 GSNKKFDADVSLEVIAMRTPGFSGXXXXXXXXXXXXXXGRRGRTGISSKEIDDS 350
           G           + +A  T G+SG               RR  T    KE+ D+
Sbjct: 309 GKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRRIHTATHFKEVYDN 362

---

>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)|
          Length = 419

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 128
           T + LL  +DG       IV   TN  D LD AL+RPGR D
Sbjct: 308 TFSGLLNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVD 348

---

>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 419

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 128
           T + LL  +DG       IV   TN  D LD AL+RPGR D
Sbjct: 308 TFSGLLNALDGVASTEARIVFMTTNHIDRLDPALIRPGRVD 348

---

>YCX9_CHLRE (Q32065) Hypothetical 341.7 kDa protein in psbD-psbC intergenic|
            region (ORF2971) (ORFB)
          Length = 2971

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +3

Query: 9    LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQV 137
            +  LL  +D    N G +V A T+   +LD AL RPGR D  +
Sbjct: 2296 ITDLLVIIDSVRSNKGFVVFATTDIPHVLDPALRRPGRLDETI 2338

---

>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1|
          Length = 456

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 143
           T + LL  +DG   +   I    TN  + LD+A++RPGR D +V V
Sbjct: 341 TFSGLLNALDGVTSSEETITFMTTNHPEKLDAAIMRPGRIDYKVFV 386

---

>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)|
          Length = 491

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = +3

Query: 42  EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 188
           E  T + VVA  N    L S +LR GRFD    +D+P+   R  I ++H
Sbjct: 356 EKTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNNEERELIFQIH 404

---

>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 418

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 128
           T + LL  +DG       IV   TN  D LD AL+RPGR D
Sbjct: 308 TFSGLLNALDGVASTEARIVFMTTNYIDRLDPALIRPGRVD 348

---

>YCF2_ANTFO (Q859W7) Protein ycf2|
          Length = 2392

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
 Frame = +3

Query: 54   GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKF---DADVSL 224
            GII++ +T+    +D AL+ P R D+ +++ + D+  R E   +   +K+F   +  +  
Sbjct: 1768 GIIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRFYFKNKLLHF 1827

Query: 225  EVIAMRTPGFSG 260
               A RT G++G
Sbjct: 1828 NEFAYRTMGYNG 1839

---

>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 420

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 128
           T + LL  +DG   +   IV   TN  + LD AL+RPGR D
Sbjct: 309 TFSGLLNALDGVASSEARIVFMTTNFIERLDPALVRPGRVD 349

---

>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)|
          Length = 449

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 6   TLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 128
           T + LL  +DG   +   I+   TN  + LD AL+RPGR D
Sbjct: 323 TFSGLLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVD 363

---

>MUA1_XENLA (P10667) Integumentary mucin A.1 precursor (FIM-A.1)|
           (Preprospasmolysin)
          Length = 400

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 29/133 (21%), Positives = 45/133 (33%)
 Frame = -1

Query: 442 TACPTSW*ATRLXLFPSVMTVPSIPATXXXXXXXXXXXXIPVLPRRPANMAASFRRFAKS 263
           T  PT+   T +   P   TVP+ P T               +P  P            +
Sbjct: 134 TTVPTTPETTTVPTTPETTTVPTTPETT-------------TVPTTPETTTVPTTPETTT 180

Query: 262 APLNPGVLIAMTSRETSASNFLLLPCTLRISVLPRTSGTSTLTCLSKRPGLSKAESKMSA 83
            P  P      T+ ET+      +P T   + +P T  T+T+    +   +       +A
Sbjct: 181 VPTTPETTTVPTTPETTT-----VPTTPETTTVPTTPETTTVPTTPETTTVPTTPETTTA 235

Query: 82  LLVAATTMIPVFP 44
              A TT +P  P
Sbjct: 236 STTAETTTVPTTP 248

---

>CZF1_CANAL (P28875) Zinc finger protein 1|
          Length = 388

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -3

Query: 326 NSGPP-TSAC*YGCLV--QKIRQVCSTEPRCSHCNDFKRN 216
           NSG P T     GCL   Q+ ++ C T PRC+ C   + N
Sbjct: 305 NSGKPITKRSRMGCLTCRQRKKRCCETRPRCTECTRLRLN 344

---

>MDH_PYRAE (Q8ZVB2) Malate dehydrogenase (EC 1.1.1.37)|
          Length = 309

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
 Frame = +3

Query: 21  LTEMDGFEGN----TGIIVVAATNRAD----ILDSALLRPGRFDRQVSVDVPDVRGRTEI 176
           +TE+ GF  N     G+ ++A   + D    ++ S +L+     R V V+VP + GR+ +
Sbjct: 214 ITELRGFSSNWGPGAGLAIMAEAVKRDAKRALIASVVLQGEYGVRDVPVEVPIILGRSGV 273

Query: 177 LKV 185
           +KV
Sbjct: 274 VKV 276

---

>ZBT20_HUMAN (Q9HC78) Zinc finger and BTB domain-containing protein 20 (Zinc|
           finger protein 288) (Dendritic-derived BTB/POZ zinc
           finger protein)
          Length = 741

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 281 QKIRQVCSTEPRCSHCNDFKRNIGIKLLVATVHLE 177
           Q++ +  ST P  +HC    R + I+ LV  +H++
Sbjct: 296 QQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIK 330

---

>INT1_MOUSE (Q6P4S8) Integrator complex subunit 1 (Int1)|
          Length = 2126

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 15/113 (13%)
 Frame = -1

Query: 322 PVLPRRPANMAASFRRFAKSAPLNPGVLIAMTSR----ETSASNFLL------LPCTLRI 173
           P   RRP+  A        S    PG  IA+ S+    E+  ++ LL      LP   + 
Sbjct: 6   PTTVRRPSAAAKP------SGHPPPGDFIALGSKGQASESKTTSTLLKPAPSGLPSERKR 59

Query: 172 SVLPRTSGTSTLTCLSKRPGLS-----KAESKMSALLVAATTMIPVFPSKPSI 29
                 SGTS LT L+KRP LS      A  +++   VA    I     +PS+
Sbjct: 60  DASASLSGTSALTGLTKRPKLSSTPPLSALGRLAEAAVAEKRAISPSIKEPSV 112

---

>GATB_BORBU (O51316) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 485

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -3

Query: 242 SHCN----DFKRNIGIKLLVATVHLENLCPSTHIRNINTHLSVKAS 117
           S CN     F+ ++ + L+V    +E+  P   I+N+N+  S+KA+
Sbjct: 183 SECNMENGSFRCDVNVNLIVKENGVEHKTPIAEIKNLNSFKSIKAA 228

---

>RPOC1_SINAL (P46819) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 688

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 239 ENTWVQWSRLGESSERGSHISRPTWEDRNFLK 334
           EN+ V+W +LGE    G+      WEDR  ++
Sbjct: 221 ENSLVEWKQLGEEGPTGNE-----WEDRKIVR 247

---

>RPOC1_ARATH (P56763) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 680

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 239 ENTWVQWSRLGESSERGSHISRPTWEDRNFLK 334
           EN+ V+W +LGE    G+      WEDR  ++
Sbjct: 213 ENSLVEWKQLGEEGPTGNE-----WEDRKIVR 239


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,078,046
Number of Sequences: 219361
Number of extensions: 1213907
Number of successful extensions: 3550
Number of sequences better than 10.0: 241
Number of HSP's better than 10.0 without gapping: 3377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3477
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---