ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet119b03 |
|---|---|
| Clone Library Name | barley_pub |
>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:| Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin 2 low-kDa subunit] Length = 433 Score = 42.4 bits (98), Expect = 6e-04 Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 11/119 (9%) Frame = +1 Query: 151 VLAPITKDAATSLYTIPFHDGARLV-----LDIAGPLVWSTC--HGGQPPAEIP-CSSPT 306 ++ P+ DA+T L+ L+ +D+ G +W C H + P C S Sbjct: 41 LVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQHYSSKTYQAPFCHSTQ 100 Query: 307 CLLANAYPAPGCPA---PSCGSDRHHKPCTAFPSNPVTGACAAGSLFHARLVANTTDGN 474 C AN + CPA P C H C +NP+T G L L + T G+ Sbjct: 101 CSRANTHQCLSCPAASRPGC----HKNTCGLMSTNPITQQTGLGELGQDVLAIHATQGS 155
>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic| 7S globulin high-kDa subunit; Basic 7S globulin low-kDa subunit] Length = 427 Score = 39.3 bits (90), Expect = 0.005 Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 11/119 (9%) Frame = +1 Query: 151 VLAPITKDAATSLYTIPFHDGARLV-----LDIAGPLVWSTCHG--GQPPAEIP-CSSPT 306 V+ P+ D +T L+ L+ +D+ G +W C + P C S Sbjct: 34 VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQ 93 Query: 307 CLLANAYPAPGCPA---PSCGSDRHHKPCTAFPSNPVTGACAAGSLFHARLVANTTDGN 474 C AN + CPA P C H C +NP+T G L L + T G+ Sbjct: 94 CSRANTHQCLSCPAASRPGC----HKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGS 148
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 36.2 bits (82), Expect = 0.046 Identities = 18/41 (43%), Positives = 20/41 (48%) Frame = +3 Query: 258 VPRRPAAGGDPVQQPHLPARQRLPRPGMPCAQLRQRQAPQA 380 VP RP + G P P PA LPRP P LR+ P A Sbjct: 665 VPPRPPSSGPPPAPPLSPALSGLPRPASPYGSLRRHPPPWA 705
>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)| (Trinucleotide repeat-containing gene 13 protein) Length = 1312 Score = 33.9 bits (76), Expect = 0.23 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Frame = +1 Query: 202 FHDGARLVLDIAGP------LVWSTCHGGQPPAEIPCSSPTCLLAN--------AYPAPG 339 F G+R +L + GP ++ G PPA +SP A+ A PAPG Sbjct: 87 FRPGSRRLLGLGGPPRPFVVVLLPLASPGAPPAAPTRASPLGARASPPRSGVSLARPAPG 146 Query: 340 CPAPSC 357 CP P+C Sbjct: 147 CPRPAC 152
>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen) Length = 4544 Score = 32.7 bits (73), Expect = 0.51 Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 1/63 (1%) Frame = +1 Query: 250 WSTCHGGQPPAEIPCSSPTCLLANAYPAPGCPAPSC-GSDRHHKPCTAFPSNPVTGACAA 426 W C G A P PTC + P C C G ++ CT N C Sbjct: 4237 WEHCRNGGTCAASPSGMPTCRCPTGFTGPKCTQQVCAGYCANNSTCTVNQGNQPQCRCLP 4296 Query: 427 GSL 435 G L Sbjct: 4297 GFL 4299
>INSL3_CALJA (O97937) Insulin-like 3 precursor (Leydig insulin-like peptide)| (Ley-I-L) (Relaxin-like factor) [Contains: Insulin-like 3 B chain; Insulin-like 3 A chain] Length = 131 Score = 32.3 bits (72), Expect = 0.66 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = +1 Query: 310 LLANAYPAPGCPA--PSCGSDRHHKPCTAFPSNPVTGACAAG 429 L+AN+ PAPG P P + HH+ A SNP C +G Sbjct: 79 LVANSEPAPGGPGLQPMPQTSHHHRHRRAAASNPARYCCLSG 120
>AIRE_HUMAN (O43918) Autoimmune regulator (Autoimmune polyendocrinopathy| candidiasis ectodermal dystrophy protein) (APECED protein) Length = 545 Score = 32.3 bits (72), Expect = 0.66 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%) Frame = -3 Query: 470 PSVVLATSLAWKRLPA--AQAPVTGLDGNAVHGLWCL 366 P + T+L +K LPA + AP+ GLD +A+H L C+ Sbjct: 384 PLAGMDTTLVYKHLPAPPSAAPLPGLDSSALHPLLCV 420
>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2| Length = 306 Score = 32.0 bits (71), Expect = 0.87 Identities = 24/90 (26%), Positives = 26/90 (28%) Frame = +3 Query: 108 GRLARCSGVVQTPSGARSDHQGXXXXXXXXXXXXXXXXXXXXXXXXXXVDVPRRPAAGGD 287 GR C PS ARS PRRP Sbjct: 175 GRWRTCCAAAAAPSAARS--ASARTGRSTSSCARAARAPSATEGALTRTPAPRRPLQRRR 232 Query: 288 PVQQPHLPARQRLPRPGMPCAQLRQRQAPQ 377 P P P RQR P Q RQR +P+ Sbjct: 233 PGTGPWRPGRQRGAGTAPPGTQPRQRPSPR 262
>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein 1| (PRAX-1) (Peripheral benzodiazepine receptor-interacting protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1) Length = 1857 Score = 32.0 bits (71), Expect = 0.87 Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 2/58 (3%) Frame = +1 Query: 238 GPLVWSTCHGGQPPAEIPCSSPTCLLANAYPAPGCP--APSCGSDRHHKPCTAFPSNP 405 GP V+ST H PP + S A P PG P PS H AF NP Sbjct: 1720 GPFVYSTAHTTGPPPKPRRSKKAESEGPAQPCPGPPKLVPSADLKAPHSMVAAFDYNP 1777
>IF2_SYNP6 (Q5N0A5) Translation initiation factor IF-2| Length = 1030 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Frame = +3 Query: 261 PRRPAAGGDPVQQPHLPARQR---------LPRPGMPCAQLRQRQAP 374 PRRPAA +P + P PAR PRP P A ++P Sbjct: 117 PRRPAAANEPAKAPIKPARPEKSAEKPEIVTPRPPAPAASAEPAKSP 163
>HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine kinase| substrate Length = 760 Score = 31.6 bits (70), Expect = 1.1 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +3 Query: 288 PVQQPH-LPARQRLPRPGMPCAQLRQRQAPQAVHGVPI 398 P QQP +P +Q P+P M L+Q QAP A P+ Sbjct: 682 PGQQPQQIPVQQPQPQPQMGHVMLQQHQAPPAAQAPPV 719
>CS016_HUMAN (Q8ND99) Protein C19orf16| Length = 567 Score = 31.2 bits (69), Expect = 1.5 Identities = 18/59 (30%), Positives = 24/59 (40%) Frame = +1 Query: 250 WSTCHGGQPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDRHHKPCTAFPSNPVTGACAA 426 W G PP + P +S A A PAP AP+ + P PS + A A+ Sbjct: 83 WKPPPGLAPPQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPAIPAPSRKASAASAS 141
>LRFN3_MOUSE (Q8BLY3) Leucine-rich repeat and fibronectin type-III| domain-containing protein 3 precursor Length = 626 Score = 31.2 bits (69), Expect = 1.5 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Frame = +1 Query: 262 HGGQPPAEIPCSSP---TCLLANAY--PAPGCPAPSCGSDRHH 375 HGGQPP + ++P C N P P PAP + R H Sbjct: 565 HGGQPPGKAKATAPVSSVCSQTNGALGPVPSAPAPEPAAPRAH 607
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 30.8 bits (68), Expect = 1.9 Identities = 34/136 (25%), Positives = 47/136 (34%), Gaps = 26/136 (19%) Frame = +1 Query: 151 VLAPITKDAATSLYTIPFHDGARLVLDI----AGPLVWSTCHGGQPPAEI---------- 288 + AP+ AAT+ I RL I GP + GQ P + Sbjct: 775 IQAPLQAAAATTSVAIALTHHPRLPAAIFRPPPGPTTLGSLGAGQTPRHLRRLQSLAPSA 834 Query: 289 -----PCSSPT------CLLANAYPAPGCPAPS-CGSDRHHKPCTAFPSNPVTGACAAGS 432 P SSP+ + P PGC P+ GS P+ P T A S Sbjct: 835 PSPASPASSPSQPDTPSSASLHVQPLPGCSTPAGLGSLLPTAGSPPAPTPPTTAGAAGFS 894 Query: 433 LFHARLVANTTDGNNP 480 FH L + + ++P Sbjct: 895 HFHRALGGSLSSSDSP 910
>ZCH14_MOUSE (Q8VIG0) Zinc finger CCHC domain-containing protein 14 (BDG-29)| Length = 956 Score = 30.8 bits (68), Expect = 1.9 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 1/93 (1%) Frame = +1 Query: 160 PITKDAATSLYTIPFHDGARLVLDI-AGPLVWSTCHGGQPPAEIPCSSPTCLLANAYPAP 336 P + T+LYT V + GPL S C + P S P+ A+ P Sbjct: 674 PAIMNPRTALYTANTKVAFSAVSSVPVGPLQGSFCANSNTAS--PSSHPSTSFASMASLP 731 Query: 337 GCPAPSCGSDRHHKPCTAFPSNPVTGACAAGSL 435 CPAPS P ++F S G+ + G++ Sbjct: 732 SCPAPSSSPALSSVPESSFYSGG-AGSSSPGNI 763
>MEF2B_HUMAN (Q02080) Myocyte-specific enhancer factor 2B (Serum response| factor-like protein 2) (XMEF2) (RSRFR2) Length = 365 Score = 30.8 bits (68), Expect = 1.9 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Frame = +1 Query: 277 PAEIPCSSP---TCLLANAYPAPGCPAPSCGSDRHHKPCTAFPSNPVT 411 P+ IPCSSP L P GCP P+ G R T+ +P T Sbjct: 299 PSPIPCSSPGPWQSLCGLGPPCAGCPWPTAGPGRRSPGGTSPERSPGT 346
>PGK_MYCAV (O32848) Phosphoglycerate kinase (EC 2.7.2.3) (Fragment)| Length = 388 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +3 Query: 252 VDVPRRPAAGGDPVQQP-HLPARQRLPRPGMPCAQL 356 VD RRPAAG PV++P ++ R+R R G A+L Sbjct: 113 VDRRRRPAAGKHPVRRPRNVQGRRRAARAGRQMAEL 148
>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)| Length = 867 Score = 30.8 bits (68), Expect = 1.9 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = +3 Query: 258 VPRRPAAGGDPV-QQPHLPARQRLPRPGMPCAQLRQRQAPQAVH 386 VP RP A DP P +P+R PG+P + +PQ H Sbjct: 815 VPSRPGASPDPFGPPPQVPSRPNRAPPGVPSLGAWRLNSPQGKH 858
>AGRN_HUMAN (O00468) Agrin precursor| Length = 2045 Score = 30.8 bits (68), Expect = 1.9 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 1/81 (1%) Frame = +1 Query: 163 ITKDAATSLYTIPFHDGARLVLDIAGPLVWSTCHGGQPP-AEIPCSSPTCLLANAYPAPG 339 +T L TI G ++ + GP + P A + ++P LL+ A PAP Sbjct: 942 VTYGNECQLKTIACRQGLQISIQSLGPCQEAVAPSTHPTSASVTVTTPGLLLSQALPAPP 1001 Query: 340 CPAPSCGSDRHHKPCTAFPSN 402 P S H T PS+ Sbjct: 1002 GALPLAPSSTAHSQTTPPPSS 1022
>EGR2_XENLA (Q08427) Early growth response protein 2 (EGR-2) (Krox-20 protein)| Length = 421 Score = 30.4 bits (67), Expect = 2.5 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +1 Query: 232 IAGPLVWSTCHG-GQPPAEIPCSSPTCLLANAYPAPGCPAPSCGSD 366 I P +S+C+ Q P PC SPT A+ P P P+P SD Sbjct: 156 IYSPPPYSSCNEIYQDPLRFPCGSPTA--ASLPPPPSYPSPKGASD 199
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 30.4 bits (67), Expect = 2.5 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +1 Query: 298 SPTCLLANAYPAPGCPAPSCGSDRHHKPCTAFPSNPVTGACAAGS 432 SP L A + P PS GS H P P++P + AAG+ Sbjct: 265 SPATLPATSSSLPSPATPSHGSPSSHGPPATHPTSPTPPSTAAGT 309
>ZF106_MOUSE (O88466) Zinc finger protein 106 (Zfp-106) (Zinc finger protein| 474) (H3a minor histocompatibility antigen) (Son of insulin receptor mutant) Length = 1888 Score = 30.0 bits (66), Expect = 3.3 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -3 Query: 293 HGISAGGWPPWHVDQTSGPAMSRTRRAPSW 204 H GG+P WH++ ++G S R SW Sbjct: 228 HSEGTGGFPSWHMNNSNGNWKSSVRGTNSW 257
>OC90_HUMAN (Q02509) Otoconin 90 precursor (Oc90) (Phospholipase A2 homolog)| Length = 493 Score = 30.0 bits (66), Expect = 3.3 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +3 Query: 270 PAAGGDPVQQPHLPARQRLPRPGMP 344 P AGG P+ PHLP Q LP PG+P Sbjct: 13 PHAGGHPLDTPHLP--QELP-PGLP 34
>CHEB1_PSESM (Q884V3) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 390 Score = 29.6 bits (65), Expect = 4.3 Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = +1 Query: 322 AYPAPGCPAPSCGSDRHHKPCTAFPSNPV---TGACAAGSLFHA 444 A PAP PAPS S R P A P+ V T A AA HA Sbjct: 145 ASPAPAAPAPSTLSSRAPAPSAAAPARAVPSRTVAPAAAPAAHA 188
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 29.6 bits (65), Expect = 4.3 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +3 Query: 261 PRRPAAGGDPVQQPHL--PARQRLPRPGMPCAQLRQRQAPQAVHGVPIQP 404 P++P + P QQP P+ Q+ P P P AQ + Q G P+QP Sbjct: 467 PQQPGSTKPPSQQPGSAKPSAQQ-PSPAKPSAQQFTKPVSQTGFGKPLQP 515
>CCKAR_XENLA (P70031) Cholecystokinin receptor (CCK-XLR)| Length = 453 Score = 29.3 bits (64), Expect = 5.6 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = -3 Query: 293 HGISAGGWPPWHVDQTSGPAMSRTRRAPS----WKGIV*REVAASLVIGAST 150 H ++ WPPW+++ T P + R + +PS W IV V L + +T Sbjct: 38 HNLTTANWPPWNLNCT--PILDRKKPSPSDLNLWVRIVMYSVIFLLSVFGNT 87
>SUR2_CAEEL (Q10669) Protein sur-2| Length = 1587 Score = 29.3 bits (64), Expect = 5.6 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +3 Query: 258 VPRRPAAGGDPVQQPHLPARQRLPRPGMPCAQLRQRQAPQ 377 VP + G Q PHLP Q++P P + Q PQ Sbjct: 1514 VPMQYGMGHHMQQHPHLPHHQQMPAPMHTMNPMMQNMTPQ 1553
>ZCH14_HUMAN (Q8WYQ9) Zinc finger CCHC domain-containing protein 14 (BDG-29)| Length = 949 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/55 (32%), Positives = 23/55 (41%) Frame = +1 Query: 238 GPLVWSTCHGGQPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDRHHKPCTAFPSN 402 GPL C + P S P+ AN P CPAPS P ++F S+ Sbjct: 694 GPLQGGFCANSNTAS--PSSHPSTSFANMATLPSCPAPSSSPALSSVPESSFYSS 746
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2158 Score = 29.3 bits (64), Expect = 5.6 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +1 Query: 265 GGQPPAEIPCSSPTCLLANAYPAPGCPAP 351 G PPA +P S P + A PAP P P Sbjct: 670 GTAPPAPVPPSPPQPVTLGAVPAPQAPPP 698
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2161 Score = 29.3 bits (64), Expect = 5.6 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +1 Query: 265 GGQPPAEIPCSSPTCLLANAYPAPGCPAP 351 G PPA +P S P + A PAP P P Sbjct: 671 GTAPPAPVPPSPPQPVTLGAVPAPQAPPP 699
>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)| Length = 1285 Score = 29.3 bits (64), Expect = 5.6 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 17/92 (18%) Frame = +1 Query: 211 GARLVLDIAGP------LVWSTCHGGQP----PAEIPCSSPTC-LLANAYPAPGCPAPSC 357 G+R +L + GP ++ + P P + S P + ++A PAPGCP P+C Sbjct: 83 GSRRLLGVCGPPRPFVVVLLALAPAATPARACPPGVRASPPRSGVSSSARPAPGCPRPAC 142 Query: 358 GSDRHHKPCTAF------PSNPVTGACAAGSL 435 + + P T P P TG G L Sbjct: 143 --EPVYGPLTMSLKPQPQPPAPATGRKPGGGL 172
>BARH2_DROME (Q24256) Homeobox protein B-H2 (Homeobox protein BarH2)| Length = 645 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Frame = +3 Query: 252 VDVPRRPAAGGDPVQQPHLPARQRLPRPGMPCA-QLRQRQAPQAVHGVPIQPGHXXXXXX 428 +D+ R AA +Q+P LPA R+ + +P L AP P+ G+ Sbjct: 488 IDIYYRQAAAAAAMQKPSLPASYRMYQSSIPPGMSLPGMPAPPPPGAAPMLSGYYAAAAA 547 Query: 429 XXXXXXARSQHHR 467 A+ Q + Sbjct: 548 AAASAGAQQQQQQ 560
>GSLG1_MOUSE (Q61543) Golgi apparatus protein 1 precursor (Golgi| sialoglycoprotein MG-160) (E-selectin ligand 1) (ESL-1) (Selel) Length = 1175 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = +3 Query: 276 AGGDPVQQPHLPARQRLPRPGMPCAQLRQRQAPQAVHGVPIQPG 407 AG P QQP L +Q+ P P Q +Q+Q+ A G+P + G Sbjct: 54 AGQQPPQQPQLSQQQQQPPPQQ--QQQQQQQSLFAAGGLPARRG 95
>PQQE_RHOPA (Q6N8F3) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 377 Score = 28.9 bits (63), Expect = 7.3 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 7/26 (26%) Frame = -1 Query: 403 GWMGTPCTAC-------GACRCRSWA 347 GWM PC +C G CRC+++A Sbjct: 303 GWMQQPCASCAFKEIDFGGCRCQAFA 328
>CN032_PONPY (Q5R623) Protein C14orf32 homolog| Length = 245 Score = 28.9 bits (63), Expect = 7.3 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Frame = +1 Query: 274 PPAEIPCSSPTC-LLANAYPAPGCPAPSCGSDRHHKPCTAFPSNP-----VTGACAAGSL 435 PPA P S P+C YPAP P P + + P FP P T AAG L Sbjct: 84 PPAPFPPSGPSCPPPGGPYPAPTVPGPG-PTGPYPTPNMPFPELPRPYGAPTDPAAAGPL 142
>CN032_MACFA (Q4R837) Protein C14orf32 homolog| Length = 245 Score = 28.9 bits (63), Expect = 7.3 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Frame = +1 Query: 274 PPAEIPCSSPTC-LLANAYPAPGCPAPSCGSDRHHKPCTAFPSNP-----VTGACAAGSL 435 PPA P S P+C YPAP P P + + P FP P T AAG L Sbjct: 84 PPAPFPPSGPSCPPPGGPYPAPTVPGPG-PTGPYPTPNMPFPELPRPYGAPTDPAAAGPL 142
>CN032_HUMAN (Q8NDC0) Protein C14orf32| Length = 245 Score = 28.9 bits (63), Expect = 7.3 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Frame = +1 Query: 274 PPAEIPCSSPTC-LLANAYPAPGCPAPSCGSDRHHKPCTAFPSNP-----VTGACAAGSL 435 PPA P S P+C YPAP P P + + P FP P T AAG L Sbjct: 84 PPAPFPPSGPSCPPPGGPYPAPTVPGPG-PTGPYPTPNMPFPELPRPYGAPTDPAAAGPL 142
>UBP21_HUMAN (Q9UK80) Ubiquitin carboxyl-terminal hydrolase 21 (EC 3.1.2.15)| (Ubiquitin thioesterase 21) (Ubiquitin-specific-processing protease 21) (Deubiquitinating enzyme 21) (NEDD8-specific protease) Length = 565 Score = 28.9 bits (63), Expect = 7.3 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 13/61 (21%) Frame = +3 Query: 264 RRPAAGGDPVQQPHLPARQRLPRPGMPCAQL-------------RQRQAPQAVHGVPIQP 404 R PA+G +P+ +P LP PRPG+P +L R R +A HGVP+ P Sbjct: 39 RNPASGPNPMLRP-LP-----PRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVPL-P 91 Query: 405 G 407 G Sbjct: 92 G 92
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 28.9 bits (63), Expect = 7.3 Identities = 20/69 (28%), Positives = 29/69 (42%) Frame = +1 Query: 274 PPAEIPCSSPTCLLANAYPAPGCPAPSCGSDRHHKPCTAFPSNPVTGACAAGSLFHARLV 453 PP +P +P P P PAP + T+ + P+TG AA + R V Sbjct: 584 PPPPLPNQAPP-------PPPPPPAPPLPASGIFSGSTSEDNRPLTGLAAAIAGAKLRKV 636 Query: 454 ANTTDGNNP 480 + DG+ P Sbjct: 637 SRVEDGSFP 645
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2157 Score = 28.5 bits (62), Expect = 9.6 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +1 Query: 265 GGQPPAEIPCSSPTCLLANAYPAPGCPAP 351 G PP +P S P + A PAP P P Sbjct: 670 GSAPPTPVPPSPPQPVTLGAVPAPQAPPP 698
>RL4_SPIKU (P61069) 50S ribosomal protein L4| Length = 208 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 287 ISAGGWPPWHVDQTSGPAMSRTRRAPSWKG 198 +S GG PW T G A + RAP WKG Sbjct: 56 VSGGGRKPWRQKGT-GRARQGSIRAPQWKG 84
>SODM_NEUCR (Q9Y783) Superoxide dismutase [Mn], mitochondrial precursor (EC| 1.15.1.1) Length = 245 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%) Frame = -3 Query: 440 WKRLPAAQAPVTGLDGNA--VHGLWCLSLPQ 354 W+ L A+QAP+ + GNA + GL SLPQ Sbjct: 8 WQNLLASQAPLQSMTGNATTMAGLATYSLPQ 38
>PQQE_BRAJA (Q89FG1) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 380 Score = 28.5 bits (62), Expect = 9.6 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 7/26 (26%) Frame = -1 Query: 403 GWMGTPCTAC-------GACRCRSWA 347 GWM PC +C G CRC+++A Sbjct: 303 GWMKEPCKSCEFREIDFGGCRCQAFA 328
>CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog| Length = 240 Score = 28.5 bits (62), Expect = 9.6 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 6/60 (10%) Frame = +1 Query: 274 PPAEIPCSSPTCLLANAYPAPGCPAPSCG-SDRHHKPCTAFPSNP-----VTGACAAGSL 435 PPA P S P+C P PG P P G + + P FP P T AAG L Sbjct: 84 PPAPFPPSGPSC------PPPGGPYPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAAGPL 137
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/40 (45%), Positives = 24/40 (60%) Frame = +3 Query: 288 PVQQPHLPARQRLPRPGMPCAQLRQRQAPQAVHGVPIQPG 407 P+ QP +P + +P+PGMP L Q PQ G+P QPG Sbjct: 221 PMPQPGMP-QPGMPQPGMPQPGLSQPGLPQP--GMP-QPG 256
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2160 Score = 28.5 bits (62), Expect = 9.6 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +1 Query: 265 GGQPPAEIPCSSPTCLLANAYPAPGCPAP 351 G PP +P S P + A PAP P P Sbjct: 670 GSAPPTPVPPSPPQPVTLGAVPAPQAPPP 698
>HXD4_CHICK (P17278) Homeobox protein Hox-D4 (Chox-A)| Length = 235 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 3/44 (6%) Frame = +1 Query: 238 GPLVWSTCHGGQ---PPAEIPCSSPTCLLANAYPAPGCPAPSCG 360 G V HG + PP+ P + C P P CP PSCG Sbjct: 67 GSAVQPRGHGQEQSAPPSHFPGQAEHC------PPPPCPIPSCG 104
>DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)| dopamine receptor) Length = 467 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +1 Query: 289 PCSSPTCLLANAYPAPGCPAPSCGSDRHHKPCTAFPSNPVTGACA 423 PC P C A PAPG P CG D P P +P CA Sbjct: 321 PCG-PDC----APPAPGLPQDPCGPD-CAPPAPGLPPDPCGSNCA 359 Score = 28.5 bits (62), Expect = 9.6 Identities = 21/52 (40%), Positives = 21/52 (40%) Frame = +1 Query: 268 GQPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDRHHKPCTAFPSNPVTGACA 423 G PP PC P C A PAPG P CG D P P P CA Sbjct: 284 GLPPD--PCG-PDC----APPAPGLPQDPCGPD-CAPPAPGLPRGPCGPDCA 327
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 7/56 (12%) Frame = +3 Query: 261 PRRPAAGGDPVQQPHLPARQRLPRPGMPCAQ-------LRQRQAPQAVHGVPIQPG 407 P P G+P + P P + P P PC Q L Q + G P QPG Sbjct: 123 PGAPGFPGNPGKAPQKPCEEITPPPCKPCPQGPPGAPGLPGDQGDKGEAGQPGQPG 178
>RL4_STAAW (P61060) 50S ribosomal protein L4| Length = 207 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 287 ISAGGWPPWHVDQTSGPAMSRTRRAPSWKG 198 +S GG PW T G A T RAP W+G Sbjct: 57 VSGGGRKPWKQKGT-GRARQGTIRAPQWRG 85
>RL4_STAAS (Q6G772) 50S ribosomal protein L4| Length = 207 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 287 ISAGGWPPWHVDQTSGPAMSRTRRAPSWKG 198 +S GG PW T G A T RAP W+G Sbjct: 57 VSGGGRKPWKQKGT-GRARQGTIRAPQWRG 85
>RL4_STAAR (Q6GEI4) 50S ribosomal protein L4| Length = 207 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 287 ISAGGWPPWHVDQTSGPAMSRTRRAPSWKG 198 +S GG PW T G A T RAP W+G Sbjct: 57 VSGGGRKPWKQKGT-GRARQGTIRAPQWRG 85
>RL4_STAAN (P61059) 50S ribosomal protein L4| Length = 207 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 287 ISAGGWPPWHVDQTSGPAMSRTRRAPSWKG 198 +S GG PW T G A T RAP W+G Sbjct: 57 VSGGGRKPWKQKGT-GRARQGTIRAPQWRG 85
>RL4_STAAM (P61058) 50S ribosomal protein L4| Length = 207 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 287 ISAGGWPPWHVDQTSGPAMSRTRRAPSWKG 198 +S GG PW T G A T RAP W+G Sbjct: 57 VSGGGRKPWKQKGT-GRARQGTIRAPQWRG 85
>RL4_STAAC (Q5HDV9) 50S ribosomal protein L4| Length = 207 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 287 ISAGGWPPWHVDQTSGPAMSRTRRAPSWKG 198 +S GG PW T G A T RAP W+G Sbjct: 57 VSGGGRKPWKQKGT-GRARQGTIRAPQWRG 85
>AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) Length = 1217 Score = 28.5 bits (62), Expect = 9.6 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = +1 Query: 271 QPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDRHHKPCTA---FPSNPVTGACAAG--SL 435 +P E+P +P A P P P P+ R HK TA PS P +AG + Sbjct: 644 EPKPEVPAPTPQA----AVPRPKPPVPTPSEKRKHKSSTAPSKAPSAPQPPKDSAGDRNP 699 Query: 436 FHARLVANT 462 H+ LV+ T Sbjct: 700 EHSALVSLT 708 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,067,234 Number of Sequences: 219361 Number of extensions: 1281396 Number of successful extensions: 5247 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 4802 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5219 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
