>TBX2_CANFA (Q863A2) T-box transcription factor TBX2 (T-box protein 2)|
          Length = 702

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 219 AGEGKEPGFLPTIQNSNSIDAVGDG 145
           AGEGKEPG  P +  ++S   +G G
Sbjct: 428 AGEGKEPGLAPLVVQTDSASPLGAG 452

>PALH_EMENI (Q9P904) pH-response regulator protein palH/RIM21|
          Length = 760

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 17/63 (26%), Positives = 23/63 (36%)
 Frame = -3

Query: 222 RAGEGKEPGFLPTIQNSNSIDAVGDGEERPDSGGGDASPTTTTSIARRAMQHGLGWDGTW 43
           R G+ + P + P  +   S   + DG  R  SG     P T     RR       W   W
Sbjct: 578 RQGDEENPHYTPRHRGLFSFHPMSDGASRRQSGADQPLPVTVIPARRRGQD---TWSPQW 634

Query: 42  STS 34
            T+
Sbjct: 635 FTN 637

>ITB4_RAT (Q64632) Integrin beta-4 precursor (GP150) (CD104 antigen)|
          Length = 1807

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 100  DDVHRSPSNAARPGLGRDVEH 38
            DDV RSP+++ RP +  D EH
Sbjct: 1353 DDVLRSPASSQRPSVSDDTEH 1373

>HAPIP_HUMAN (O60229) Huntingtin-associated protein-interacting protein (Protein|
            Duo)
          Length = 1663

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = -3

Query: 216  GEGKEPGFLPTIQNSNSIDAVGDGEERPDSGGGDASPTTTTSIARRAMQHGLGWD 52
            G  KEP  LP        ++  DG E  DS G  +S   T SIA R  Q+ +  D
Sbjct: 1588 GALKEPLQLPKTPAKQRNNSKRDGVEDIDSQGDGSSQPDTISIASRTSQNTVDSD 1642

>DLGP4_RAT (P97839) Disks large-associated protein 4 (DAP-4)|
           (SAP90/PSD-95-associated protein 4) (SAPAP4)
           (PSD-95/SAP90-binding protein 4)
          Length = 992

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -3

Query: 183 IQNSNSIDAVGDGEERPDSGGGDASPTTTTSIAR----RAMQHGLG 58
           +++ + I A+GD E+  +SGGG   P+  T+  R    RA Q  LG
Sbjct: 363 MRSGSYIKAMGD-EDSDESGGGSPKPSPKTAARRQSYLRATQQSLG 407

>PUR2_PSESM (Q87VR8) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)|
           (Glycinamide ribonucleotide synthetase)
           (Phosphoribosylglycinamide synthetase)
          Length = 431

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
 Frame = -3

Query: 213 EGKEPGFLPTIQNSNSIDA--------VGDGEERPDSGGGDA---SPTTTTSIARRAM 73
           +G+E  F+  +   N +          VGDG+  P++GG  A   +P  T  + +R M
Sbjct: 190 DGEEASFIVMVDGKNVLPMATSQDHKRVGDGDSGPNTGGMGAYSPAPVVTADVHQRVM 247

>XKR4_RAT (Q5GH59) XK-related protein 4|
          Length = 647

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -3

Query: 234 SAVSRAGEGKEPGF-LPTIQNSNSIDAVGDGEERPDSGGGDASPTTTTSIARRAMQHGLG 58
           SA + A   ++PG    T+ +S S  A G+GE RP +    AS  + ++IA  A   G  
Sbjct: 174 SATTTASTCQQPGADCKTVVSSGS--AAGEGEARPSTPQRQASNASKSNIA--ATNSGSN 229

Query: 57  WDGTWSTSKQAR 22
            +G   TS + R
Sbjct: 230 SNGATRTSGKHR 241

>RCOR_DROME (Q59E36) REST corepressor (CoREST)|
          Length = 657

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 222 RAGEGKEPGFLPTIQNSNSIDAVGDGEERPDSGGGDASPTTTTSI 88
           R   G  P    T   +NS   VG G     SG  +A+  TTT++
Sbjct: 16  RRSRGPSPNTHTTGGVTNSASLVGSGNNSGHSGNANANEKTTTAV 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,973,189
Number of Sequences: 219361
Number of extensions: 335551
Number of successful extensions: 1214
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 80,573,946
effective HSP length: 54
effective length of database: 68,728,452
effective search space used: 1649482848
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)