>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)|
          Length = 427

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 25/91 (27%), Positives = 34/91 (37%)
 Frame = -1

Query: 331 YSPRNPKTLISHKVPAESYKQHPPIPGRHRLWLRLGRYLIVFEPPTFVLD**KHPWQMLS 152
           +SP  PK    +K P    K + P P  H        Y+    PP         P +  S
Sbjct: 331 HSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP---------PVKHYS 381

Query: 151 QLFVFHKSKNFTSDYEIRMPPTVPINHYSDP 59
              V+H        Y  + PP  P++HYS P
Sbjct: 382 PPPVYHSPPPPKEKYVYKSPPPPPVHHYSPP 412

>ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (Two pore|
           domain potassium channel Ork1)
          Length = 1001

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 277 RTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPP 378
           R PP P+E + SL SGG  +  +  +  DG  PP
Sbjct: 599 RGPPPPFESNGSLASGGGGLTNMGFQMEDGATPP 632

>APE1_AERPE (O73942) Homing endonuclease I-ApeI (EC 3.1.-.-) (rRNA|
           intron-encoded homing endonuclease 1)
          Length = 222

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +1

Query: 301 KSKSLGS--GGSMVARLKLKGIDGRAPPGVEPAA 396
           KSK L    G  +    KLKGI G AP GVEPAA
Sbjct: 189 KSKKLNELLGRPLPGPSKLKGIGGGAPQGVEPAA 222

>AKT6_ARATH (Q8GXE6) Potassium channel AKT6 (Shaker pollen inward rectifier|
           K(+) channel) (Potassium channel SPIK)
          Length = 888

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = +1

Query: 172 VFINQERKLGARRRSDTVLVSTINDADQGSADVAYRTPPAPYEKSKSLGSGGSMV 336
           V ++Q+RKL   R S   ++S  N AD G      R+P  P       G GGSM+
Sbjct: 773 VVVSQKRKLNNFRNSLFGIISAANSADDGGE--VPRSPAVP-------GGGGSMI 818

>NEU1_CATCO (P15210) Isoticin-neurophysin IT 1 precursor [Contains: Isotocin|
           (IT); Neurophysin IT 1]
          Length = 154

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 156 SICQGCFH*SRTKVGGSKTIRYRPSLNHKRCRPGIGGCC 272
           S+C  C+  S   +GG + I+  PS     C PG  G C
Sbjct: 16  SVCSACYI-SNCPIGGKRAIQDSPSRQCMSCGPGDRGRC 53

>SLBP2_XENLA (Q9YGP6) Oocyte-specific histone RNA stem-loop-binding protein 2|
          Length = 250

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -2

Query: 405 VKLSRR-LHAWWCPSVNSFKFQPCDHTPPGTQRL 307
           +KL RR LHAW  PS NSF+    DH+   TQRL
Sbjct: 160 IKLWRRDLHAWDPPSQNSFQE---DHSFKQTQRL 190

>PUR8_ECOLI (P0AB89) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)|
           (ASL)
          Length = 456

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 21/56 (37%), Positives = 25/56 (44%)
 Frame = +1

Query: 292 PYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA*FDPTRGNLPGPDIARIDRLR 459
           PYEK K L  G  + A    + IDG A P  E A     T  N  G  I  +D L+
Sbjct: 401 PYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAITMVDELK 456

>PUR8_ECOL6 (P0AB90) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)|
           (ASL)
          Length = 456

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 21/56 (37%), Positives = 25/56 (44%)
 Frame = +1

Query: 292 PYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA*FDPTRGNLPGPDIARIDRLR 459
           PYEK K L  G  + A    + IDG A P  E A     T  N  G  I  +D L+
Sbjct: 401 PYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAITMVDELK 456

>COHA1_MOUSE (Q07563) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2)
          Length = 1470

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 313 LGSGGSMVARLKLKGIDGRAPPGVEPAA*FDPTRGNLPGP 432
           L SG S+   L  +G+D R PPG  P     P   ++PGP
Sbjct: 871 LSSGSSISEVLSAQGVDLRGPPG--PPGPRGPPGPSIPGP 908

>MPD2_YEAST (Q99316) Protein disulfide isomerase MPD2 precursor (EC 5.3.4.1)|
          Length = 277

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 439 LCLDLVSFPVLGQIKPQAPRLVVP 368
           LC DL  FP++  +KP+   LV+P
Sbjct: 98  LCTDLPGFPIIELVKPRTKPLVLP 121

>ERF_HUMAN (P50548) ETS domain-containing transcription factor ERF (Ets2|
           repressor factor)
          Length = 548

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 13/85 (15%)
 Frame = +1

Query: 214 SDTVLVSTINDADQGSADV--AYRTPPAPYEKSKSLGSGGSMVARLKLK-----GIDGRA 372
           S+ V V+ I+D D+   +V    R PPAP +       G S    LKL+       D R 
Sbjct: 435 SEEVEVTDISDEDEEDGEVFKTPRAPPAPPKPEPGEAPGASQCMPLKLRFKRRWSEDCRL 494

Query: 373 PPGVEPAA*FD------PTRGNLPG 429
             G  PA  F+        RG  PG
Sbjct: 495 EGGGGPAGGFEDEGEDKKVRGEGPG 519

>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein|
           (Dystrophia myotonica-containing WD repeat motif
           protein) (DMR-N9 protein)
          Length = 650

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
 Frame = -3

Query: 440 AMSGPGKFPRVGSN*AAGSTPGGALPSIPLSFSLATILPP----EPKDFDFS*GAGG 282
           A SGPG      S   AG  PG ALP++ L  SL  +  P    EP       GAGG
Sbjct: 51  AASGPGAAGPASSPPPAGPGPGPALPAVRL--SLVRLGDPDGAGEPPSTPSGLGAGG 105

>TEGU_SHV21 (Q01056) Probable large tegument protein|
          Length = 2469

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = -1

Query: 415 PVLGQIKPQAPRLVVPFRQFL*VSALRPYSPRNPKTLISHKVPAESYKQHPPIP 254
           P   Q  P+ PR   P       +   P +PR PKT     +P +  K+ P IP
Sbjct: 253 PTSTQKPPKTPRTPKP------ATPKAPKTPRKPKTPKESTIPYDKSKKPPKIP 300

>BIN1_HUMAN (O00499) Myc box-dependent-interacting protein 1 (Bridging|
           integrator 1) (Amphiphysin-like protein) (Amphiphysin
           II) (Box-dependent myc-interacting protein 1)
          Length = 593

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 395 AAGSTPGGALPSIPLSFSLATILPPEPK 312
           A G+TPG  LP  P        +PP PK
Sbjct: 319 AGGATPGATLPKSPSQLRKGPPVPPPPK 346

>RGYR_SULSH (P74759) Reverse gyrase [Includes: Helicase (EC 3.6.1.-);|
           Topoisomerase (EC 5.99.1.3)]
          Length = 1166

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 101 YFIVRGEILGFMKDEQLRKHLPRMFSLIKNE 193
           + I++GE + + K EQLR+ L    SL+K++
Sbjct: 439 FSIIKGETINYQKLEQLRQELLYYISLVKDK 469

>NEU2_CATCO (P15211) Isoticin-neurophysin IT 2 precursor [Contains: Isotocin|
           (IT); Neurophysin IT 2]
          Length = 148

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 156 SICQGCFH*SRTKVGGSKTIRYRPSLNHKRCRPGIGGCC 272
           S+C  C+  S   +GG + ++  PS     C PG  G C
Sbjct: 16  SVCSACYI-SNCPIGGKRAVQDLPSRQCMSCGPGDRGRC 53

>AREA_ASPOR (O13415) Nitrogen regulatory protein areA|
          Length = 866

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 25/112 (22%), Positives = 44/112 (39%)
 Frame = +1

Query: 130  IYERRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAYRTPPAPYEKSK 309
            + ++R  + A +  V  ++  K  AR+ S      T   + +     ++ +PPA +  + 
Sbjct: 707  VIKKRNRSSANSLAVGTSRASKKTARKNSVQQASVTTPTSSRAQNGTSFESPPAGFSAAA 766

Query: 310  SLGSGGSMVARLKLKGIDGRAPPGVEPAA*FDPTRGNLPGPDIARIDRLRAL 465
               +G   +A          APP   P+A   P+ G    P  A   R R L
Sbjct: 767  GRSNGVVPIAA---------APPKAAPSAAASPSTGQTRNPIQAAPKRQRRL 809


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,314,095
Number of Sequences: 219361
Number of extensions: 1699463
Number of successful extensions: 3946
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3942
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)