ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet116g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK120594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 505 e-140
2dbj|AK060416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 505 e-140
3ref|NM_190267.1| Oryza sativa (japonica cultivar-group), predic... 299 4e-78
4gb|AY105366.1| Zea mays PCO088639 mRNA sequence 147 4e-32
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
6dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
7dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
8gb|AC144815.3| Mus musculus BAC clone RP24-289M2 from 12, comple... 44 0.41
9ref|XM_852225.1| PREDICTED: Canis familiaris similar to SLIT-ROB... 42 1.6
10ref|XM_852190.1| PREDICTED: Canis familiaris similar to SLIT-ROB... 42 1.6
11ref|XM_852057.1| PREDICTED: Canis familiaris similar to SLIT-ROB... 42 1.6
12ref|XM_536107.2| PREDICTED: Canis familiaris similar to SLIT-ROB... 42 1.6
13gb|AC154372.1| Mus musculus BAC clone RP23-113F18 from 16, compl... 42 1.6
14gb|AC135633.3| Mus musculus BAC clone RP24-84O13 from chromosome... 40 6.4
15emb|AL390961.17| Human DNA sequence from clone RP13-16H11 on chr... 40 6.4
16emb|X77395.1|SCN201952 S.cerevisiae N2019, N2021, N2023, N2025, ... 40 6.4
17gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 40 6.4
18dbj|AK086513.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 6.4
19emb|Z17162.1|HS259ZG1 H. sapiens (D13S172) DNA segment containin... 40 6.4
20emb|Z71623.1|SCYNR008W S.cerevisiae chromosome XIV reading frame... 40 6.4
21gb|DQ333135.1| Synthetic construct Saccharomyces cerevisiae clon... 40 6.4
22gb|AC150901.2| Mus musculus BAC clone RP23-62N8 from 19, complet... 40 6.4
23emb|AL844898.5| Mouse DNA sequence from clone RP23-346M17 on chr... 40 6.4

>dbj|AK120594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147G23, full
            insert sequence
          Length = 2189

 Score =  505 bits (255), Expect = e-140
 Identities = 417/471 (88%)
 Strand = Plus / Plus

                                                                        
Query: 3    gaaaagaatgttggtttgaacccaagtgacccaattgttcaattggcagttttgcttgga 62
            |||||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||
Sbjct: 1019 gaaaagaatgttggtttggacccaagtgatcctattgttcaattggcagttctgcttgga 1078

                                                                        
Query: 63   ggttcaacaacaatagggatatcttactggctcttcgcgtatggcggctattctggagac 122
            |||||||| ||||| ||| || |||||||||||||||| || || |||||||| ||||||
Sbjct: 1079 ggttcaaccacaatcgggttaacttactggctcttcgcatacggtggctattccggagac 1138

                                                                        
Query: 123  ttgtcacctgaatcgacattggagctattgaaaagtgatggcaaagccgtacttattgat 182
            |||||||| ||||| ||| | ||||| |||| || ||||| |||||||||||||||||||
Sbjct: 1139 ttgtcacccgaatccacactagagctgttgagaaatgatgacaaagccgtacttattgat 1198

                                                                        
Query: 183  gttcggcctgaggacttgagggtgaaagatggaattcctgacctacgccgtgcagctaga 242
            |||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 1199 gttcggtctgaggacttgagagtgaaagatggaattccggatctacgccgtgcagctaga 1258

                                                                        
Query: 243  tctaaatatgcaagcgttgcttcgcctgagatcaaaggtccaacaaagaagctacttaaa 302
            |||||||||||||  | |||||| |||||||  |||||| ||  ||||| ||||||||||
Sbjct: 1259 tctaaatatgcaactgctgcttcacctgagagtaaaggttcagtaaagaggctacttaaa 1318

                                                                        
Query: 303  ggtggaaacgaaattgatgatgctttggttgcagttgtaatccgcaacttgaagttggtc 362
             ||||||  ||  |||||||||| ||| | |||||| | |||||||||||||||||||||
Sbjct: 1319 agtggaagagatgttgatgatgcgttgctcgcagttatcatccgcaacttgaagttggtc 1378

                                                                        
Query: 363  aagggtgattcaaaggtcatcattatggatgctaatggaaccagatcaaagtccattgct 422
            || |||||||||||||| || ||||||||||||||||| | | |||||||| ||||||||
Sbjct: 1379 aaaggtgattcaaaggttataattatggatgctaatgggagccgatcaaaggccattgct 1438

                                                               
Query: 423  aggctactgaagaagcttggtgtgcagcaaccttacctggttaaaggtggt 473
            ||| |||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 1439 aggttactgaagaagcttggtgtgcagcgaccttaccttgttaaaggtggt 1489



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>dbj|AK060416.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E12, full
           insert sequence
          Length = 1472

 Score =  505 bits (255), Expect = e-140
 Identities = 414/467 (88%)
 Strand = Plus / Plus

                                                                       
Query: 7   agaatgttggtttgaacccaagtgacccaattgttcaattggcagttttgcttggaggtt 66
           |||||||||||||| |||||||||| || |||||||||||||||||| ||||||||||||
Sbjct: 311 agaatgttggtttggacccaagtgatcctattgttcaattggcagttctgcttggaggtt 370

                                                                       
Query: 67  caacaacaatagggatatcttactggctcttcgcgtatggcggctattctggagacttgt 126
           |||| ||||| ||| || |||||||||||||||| || || |||||||| ||||||||||
Sbjct: 371 caaccacaatcgggttaacttactggctcttcgcatacggtggctattccggagacttgt 430

                                                                       
Query: 127 cacctgaatcgacattggagctattgaaaagtgatggcaaagccgtacttattgatgttc 186
           |||| ||||| ||| | ||||| |||| || ||||| |||||||||||||||||||||||
Sbjct: 431 cacccgaatccacactagagctgttgagaaatgatgacaaagccgtacttattgatgttc 490

                                                                       
Query: 187 ggcctgaggacttgagggtgaaagatggaattcctgacctacgccgtgcagctagatcta 246
           || ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 491 ggtctgaggacttgagagtgaaagatggaattccggatctacgccgtgcagctagatcta 550

                                                                       
Query: 247 aatatgcaagcgttgcttcgcctgagatcaaaggtccaacaaagaagctacttaaaggtg 306
           |||||||||  | |||||| |||||||| |||||| ||  ||||| |||||||||| |||
Sbjct: 551 aatatgcaactgctgcttcacctgagattaaaggttcagtaaagaggctacttaaaagtg 610

                                                                       
Query: 307 gaaacgaaattgatgatgctttggttgcagttgtaatccgcaacttgaagttggtcaagg 366
           |||  ||  |||||||||| ||| | |||||| | ||||||||||||||||||||||| |
Sbjct: 611 gaagagatgttgatgatgcgttgctcgcagttatcatccgcaacttgaagttggtcaaag 670

                                                                       
Query: 367 gtgattcaaaggtcatcattatggatgctaatggaaccagatcaaagtccattgctaggc 426
           ||||||||||||| || ||||||||||||||||| | | |||||||| ||||||||||| 
Sbjct: 671 gtgattcaaaggttataattatggatgctaatgggagccgatcaaaggccattgctaggt 730

                                                          
Query: 427 tactgaagaagcttggtgtgcagcaaccttacctggttaaaggtggt 473
           |||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 731 tactgaagaagcttggtgtgcagcgaccttaccttgttaaaggtggt 777



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>ref|NM_190267.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1785

 Score =  299 bits (151), Expect = 4e-78
 Identities = 247/279 (88%)
 Strand = Plus / Plus

                                                                        
Query: 195  gacttgagggtgaaagatggaattcctgacctacgccgtgcagctagatctaaatatgca 254
            |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1063 gacttgagagtgaaagatggaattccggatctacgccgtgcagctagatctaaatatgca 1122

                                                                        
Query: 255  agcgttgcttcgcctgagatcaaaggtccaacaaagaagctacttaaaggtggaaacgaa 314
            |  | |||||| |||||||| |||||| ||  ||||| |||||||||| ||||||  || 
Sbjct: 1123 actgctgcttcacctgagattaaaggttcagtaaagaggctacttaaaagtggaagagat 1182

                                                                        
Query: 315  attgatgatgctttggttgcagttgtaatccgcaacttgaagttggtcaagggtgattca 374
             |||||||||| ||| | |||||| | ||||||||||||||||||||||| |||||||||
Sbjct: 1183 gttgatgatgcgttgctcgcagttatcatccgcaacttgaagttggtcaaaggtgattca 1242

                                                                        
Query: 375  aaggtcatcattatggatgctaatggaaccagatcaaagtccattgctaggctactgaag 434
            ||||| || ||||||||||||||||| | | |||||||| ||||||||||| ||||||||
Sbjct: 1243 aaggttataattatggatgctaatgggagccgatcaaaggccattgctaggttactgaag 1302

                                                   
Query: 435  aagcttggtgtgcagcaaccttacctggttaaaggtggt 473
            |||||||||||||||| ||||||||| ||||||||||||
Sbjct: 1303 aagcttggtgtgcagcgaccttaccttgttaaaggtggt 1341



 Score =  176 bits (89), Expect = 4e-41
 Identities = 149/169 (88%)
 Strand = Plus / Plus

                                                                        
Query: 3    gaaaagaatgttggtttgaacccaagtgacccaattgttcaattggcagttttgcttgga 62
            |||||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||
Sbjct: 895  gaaaagaatgttggtttggacccaagtgatcctattgttcaattggcagttctgcttgga 954

                                                                        
Query: 63   ggttcaacaacaatagggatatcttactggctcttcgcgtatggcggctattctggagac 122
            |||||||| ||||| ||| || |||||||||||||||| || || |||||||| ||||||
Sbjct: 955  ggttcaaccacaatcgggttaacttactggctcttcgcatacggtggctattccggagac 1014

                                                             
Query: 123  ttgtcacctgaatcgacattggagctattgaaaagtgatggcaaagccg 171
            |||||||| ||||| ||| | ||||| |||| || ||||| ||||||||
Sbjct: 1015 ttgtcacccgaatccacactagagctgttgagaaatgatgacaaagccg 1063



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>gb|AY105366.1| Zea mays PCO088639 mRNA sequence
          Length = 793

 Score =  147 bits (74), Expect = 4e-32
 Identities = 137/158 (86%)
 Strand = Plus / Plus

                                                                       
Query: 316 ttgatgatgctttggttgcagttgtaatccgcaacttgaagttggtcaagggtgattcaa 375
           |||||||||||||  | |||||||| ||||| |||||||| ||||| ||||| |||||||
Sbjct: 53  ttgatgatgctttactggcagttgtcatccgaaacttgaaattggtgaagggcgattcaa 112

                                                                       
Query: 376 aggtcatcattatggatgctaatggaaccagatcaaagtccattgctaggctactgaaga 435
           | |||||  |||||||| |||||||| |  |||||||  ||||||||||| |||||||||
Sbjct: 113 aagtcatagttatggattctaatggagctcgatcaaaagccattgctaggttactgaaga 172

                                                 
Query: 436 agcttggtgtgcagcaaccttacctggttaaaggtggt 473
           |||| |||||||||| ||||||||| ||||||||||||
Sbjct: 173 agctcggtgtgcagcgaccttaccttgttaaaggtggt 210



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                            
Query: 85       cttactggctcttcgcgtatggcggctattctggagacttgtcacctgaatcgacattgg 144
                |||||||||||||||| || || |||||||| |||||||||||||| ||||| ||| | |
Sbjct: 38958023 cttactggctcttcgcatacggtggctattccggagacttgtcacccgaatccacactag 38957964

                                                                   
Query: 145      agctattgaaaagtgatggcaaagccgtacttattgatgttcggcctgagg 195
                |||| |||| || ||||| ||||||||||||||||||||||||| ||||||
Sbjct: 38957963 agctgttgagaaatgatgacaaagccgtacttattgatgttcggtctgagg 38957913



 Score =  115 bits (58), Expect = 1e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                            
Query: 364      agggtgattcaaaggtcatcattatggatgctaatggaaccagatcaaagtccattgcta 423
                |||||||||||||||| || ||||||||||||||||| | | |||||||| |||||||||
Sbjct: 38957024 agggtgattcaaaggttataattatggatgctaatgggagccgatcaaaggccattgcta 38956965

                                          
Query: 424      ggctactgaagaagcttggtgtgcag 449
                || |||||||||||||||||||||||
Sbjct: 38956964 ggttactgaagaagcttggtgtgcag 38956939



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                            
Query: 3        gaaaagaatgttggtttgaacccaagtgacccaattgttcaattggcagttttgcttgga 62
                |||||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||
Sbjct: 38958184 gaaaagaatgttggtttggacccaagtgatcctattgttcaattggcagttctgcttgga 38958125

                              
Query: 63       ggttcaacaacaat 76
                |||||||| |||||
Sbjct: 38958124 ggttcaaccacaat 38958111



 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                            
Query: 193      aggacttgagggtgaaagatggaattcctgacctacgccgtgcagctagatctaaatatg 252
                |||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 38957584 aggacttgagagtgaaagatggaattccggatctacgccgtgcagctagatctaaatatg 38957525

                                    
Query: 253      caagcgttgcttcgcctgag 272
                |||  | |||||| ||||||
Sbjct: 38957524 caactgctgcttcacctgag 38957505



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                            
Query: 287      aaagaagctacttaaaggtggaaacgaaattgatgatgctttggttgcagttgtaatccg 346
                ||||| |||||||||| ||||||  ||  |||||||||| ||| | |||||| | |||||
Sbjct: 38957190 aaagaggctacttaaaagtggaagagatgttgatgatgcgttgctcgcagttatcatccg 38957131

                                  
Query: 347      caacttgaagttggtcaa 364
                ||||||||||||||||||
Sbjct: 38957130 caacttgaagttggtcaa 38957113



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 446      gcagcaaccttacctggttaaaggtggt 473
                ||||| ||||||||| ||||||||||||
Sbjct: 38956859 gcagcgaccttaccttgttaaaggtggt 38956832



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>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                         
Query: 85    cttactggctcttcgcgtatggcggctattctggagacttgtcacctgaatcgacattgg 144
             |||||||||||||||| || || |||||||| |||||||||||||| ||||| ||| | |
Sbjct: 31656 cttactggctcttcgcatacggtggctattccggagacttgtcacccgaatccacactag 31597

                                                                
Query: 145   agctattgaaaagtgatggcaaagccgtacttattgatgttcggcctgagg 195
             |||| |||| || ||||| ||||||||||||||||||||||||| ||||||
Sbjct: 31596 agctgttgagaaatgatgacaaagccgtacttattgatgttcggtctgagg 31546



 Score =  115 bits (58), Expect = 1e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                         
Query: 364   agggtgattcaaaggtcatcattatggatgctaatggaaccagatcaaagtccattgcta 423
             |||||||||||||||| || ||||||||||||||||| | | |||||||| |||||||||
Sbjct: 30657 agggtgattcaaaggttataattatggatgctaatgggagccgatcaaaggccattgcta 30598

                                       
Query: 424   ggctactgaagaagcttggtgtgcag 449
             || |||||||||||||||||||||||
Sbjct: 30597 ggttactgaagaagcttggtgtgcag 30572



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                         
Query: 3     gaaaagaatgttggtttgaacccaagtgacccaattgttcaattggcagttttgcttgga 62
             |||||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||
Sbjct: 31817 gaaaagaatgttggtttggacccaagtgatcctattgttcaattggcagttctgcttgga 31758

                           
Query: 63    ggttcaacaacaat 76
             |||||||| |||||
Sbjct: 31757 ggttcaaccacaat 31744



 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                         
Query: 193   aggacttgagggtgaaagatggaattcctgacctacgccgtgcagctagatctaaatatg 252
             |||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 31217 aggacttgagagtgaaagatggaattccggatctacgccgtgcagctagatctaaatatg 31158

                                 
Query: 253   caagcgttgcttcgcctgag 272
             |||  | |||||| ||||||
Sbjct: 31157 caactgctgcttcacctgag 31138



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                         
Query: 287   aaagaagctacttaaaggtggaaacgaaattgatgatgctttggttgcagttgtaatccg 346
             ||||| |||||||||| ||||||  ||  |||||||||| ||| | |||||| | |||||
Sbjct: 30823 aaagaggctacttaaaagtggaagagatgttgatgatgcgttgctcgcagttatcatccg 30764

                               
Query: 347   caacttgaagttggtcaa 364
             ||||||||||||||||||
Sbjct: 30763 caacttgaagttggtcaa 30746



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 446   gcagcaaccttacctggttaaaggtggt 473
             ||||| ||||||||| ||||||||||||
Sbjct: 30492 gcagcgaccttaccttgttaaaggtggt 30465



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>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696G06
          Length = 142571

 Score =  117 bits (59), Expect = 3e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                          
Query: 85     cttactggctcttcgcgtatggcggctattctggagacttgtcacctgaatcgacattgg 144
              |||||||||||||||| || || |||||||| |||||||||||||| ||||| ||| | |
Sbjct: 122809 cttactggctcttcgcatacggtggctattccggagacttgtcacccgaatccacactag 122750

                                                                 
Query: 145    agctattgaaaagtgatggcaaagccgtacttattgatgttcggcctgagg 195
              |||| |||| || ||||| ||||||||||||||||||||||||| ||||||
Sbjct: 122749 agctgttgagaaatgatgacaaagccgtacttattgatgttcggtctgagg 122699



 Score =  115 bits (58), Expect = 1e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                          
Query: 364    agggtgattcaaaggtcatcattatggatgctaatggaaccagatcaaagtccattgcta 423
              |||||||||||||||| || ||||||||||||||||| | | |||||||| |||||||||
Sbjct: 121810 agggtgattcaaaggttataattatggatgctaatgggagccgatcaaaggccattgcta 121751

                                        
Query: 424    ggctactgaagaagcttggtgtgcag 449
              || |||||||||||||||||||||||
Sbjct: 121750 ggttactgaagaagcttggtgtgcag 121725



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                          
Query: 3      gaaaagaatgttggtttgaacccaagtgacccaattgttcaattggcagttttgcttgga 62
              |||||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||
Sbjct: 122970 gaaaagaatgttggtttggacccaagtgatcctattgttcaattggcagttctgcttgga 122911

                            
Query: 63     ggttcaacaacaat 76
              |||||||| |||||
Sbjct: 122910 ggttcaaccacaat 122897



 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                          
Query: 193    aggacttgagggtgaaagatggaattcctgacctacgccgtgcagctagatctaaatatg 252
              |||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 122370 aggacttgagagtgaaagatggaattccggatctacgccgtgcagctagatctaaatatg 122311

                                  
Query: 253    caagcgttgcttcgcctgag 272
              |||  | |||||| ||||||
Sbjct: 122310 caactgctgcttcacctgag 122291



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                          
Query: 287    aaagaagctacttaaaggtggaaacgaaattgatgatgctttggttgcagttgtaatccg 346
              ||||| |||||||||| ||||||  ||  |||||||||| ||| | |||||| | |||||
Sbjct: 121976 aaagaggctacttaaaagtggaagagatgttgatgatgcgttgctcgcagttatcatccg 121917

                                
Query: 347    caacttgaagttggtcaa 364
              ||||||||||||||||||
Sbjct: 121916 caacttgaagttggtcaa 121899



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 446    gcagcaaccttacctggttaaaggtggt 473
              ||||| ||||||||| ||||||||||||
Sbjct: 121645 gcagcgaccttaccttgttaaaggtggt 121618



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>gb|AC144815.3| Mus musculus BAC clone RP24-289M2 from 12, complete sequence
          Length = 144707

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 189   cctgaggacttgagggtgaaagatggaattcctg 222
             |||||||||||||||||||  |||| ||||||||
Sbjct: 82771 cctgaggacttgagggtgagggatgaaattcctg 82738



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>ref|XM_852225.1| PREDICTED: Canis familiaris similar to SLIT-ROBO Rho GTPase
            activating protein 2 (srGAP2) (Formin-binding protein 2),
            transcript variant 14 (LOC478949), mRNA
          Length = 3711

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 196  acttgagggtgaaagatggaa 216
            |||||||||||||||||||||
Sbjct: 3661 acttgagggtgaaagatggaa 3641



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>ref|XM_852190.1| PREDICTED: Canis familiaris similar to SLIT-ROBO Rho GTPase
            activating protein 2 (srGAP2) (Formin-binding protein 2),
            transcript variant 13 (LOC478949), mRNA
          Length = 3699

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 196  acttgagggtgaaagatggaa 216
            |||||||||||||||||||||
Sbjct: 3649 acttgagggtgaaagatggaa 3629



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>ref|XM_852057.1| PREDICTED: Canis familiaris similar to SLIT-ROBO Rho GTPase
            activating protein 2 (srGAP2) (Formin-binding protein 2),
            transcript variant 10 (LOC478949), mRNA
          Length = 3777

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 196  acttgagggtgaaagatggaa 216
            |||||||||||||||||||||
Sbjct: 3727 acttgagggtgaaagatggaa 3707



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>ref|XM_536107.2| PREDICTED: Canis familiaris similar to SLIT-ROBO Rho GTPase
            activating protein 2 (srGAP2) (Formin-binding protein 2),
            transcript variant 1 (LOC478949), mRNA
          Length = 3510

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 196  acttgagggtgaaagatggaa 216
            |||||||||||||||||||||
Sbjct: 3460 acttgagggtgaaagatggaa 3440



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>gb|AC154372.1| Mus musculus BAC clone RP23-113F18 from 16, complete sequence
          Length = 183227

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 30    gacccaattgttcaattggcagttt 54
             |||| ||||||||||||||||||||
Sbjct: 99590 gacctaattgttcaattggcagttt 99566



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>gb|AC135633.3| Mus musculus BAC clone RP24-84O13 from chromosome 19, complete sequence
          Length = 185138

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      agaatgttggtttgaaccca 26
              ||||||||||||||||||||
Sbjct: 175009 agaatgttggtttgaaccca 175028



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>emb|AL390961.17| Human DNA sequence from clone RP13-16H11 on chromosome 10 Contains three
              novel genes, the gene for trans-prenyltransferase (TPT),
              the 3' end of the SSH3BP gene for spectrin SH3 domain
              binding protein 1, a heat shock protein pseudogene and a
              CpG island, complete sequence
          Length = 173950

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    aaaggtcatcattatggatg 393
              ||||||||||||||||||||
Sbjct: 169191 aaaggtcatcattatggatg 169172



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>emb|X77395.1|SCN201952 S.cerevisiae N2019, N2021, N2023, N2025, N2027, N2031, N2048 and N2050
             genes
          Length = 23901

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   ctagatctaaatatgcaagc 257
             ||||||||||||||||||||
Sbjct: 12634 ctagatctaaatatgcaagc 12615



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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    aattgatgatgctttggttg 333
              ||||||||||||||||||||
Sbjct: 633866 aattgatgatgctttggttg 633885



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>dbj|AK086513.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:D930033H10 product:unclassifiable, full
            insert sequence
          Length = 2591

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    agaatgttggtttgaaccca 26
            ||||||||||||||||||||
Sbjct: 2354 agaatgttggtttgaaccca 2373



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>emb|Z17162.1|HS259ZG1 H. sapiens (D13S172) DNA segment containing (CA) repeat; clone
           AFM259zg1; single read
          Length = 314

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 tgaaaagtgatggcaaagcc 170
           ||||||||||||||||||||
Sbjct: 176 tgaaaagtgatggcaaagcc 157



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>emb|Z71623.1|SCYNR008W S.cerevisiae chromosome XIV reading frame ORF YNR008w
          Length = 2575

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  ctagatctaaatatgcaagc 257
            ||||||||||||||||||||
Sbjct: 1161 ctagatctaaatatgcaagc 1142



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>gb|DQ333135.1| Synthetic construct Saccharomyces cerevisiae clone FLH112588.01X
           LRO1 gene, complete sequence
          Length = 1986

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 ctagatctaaatatgcaagc 257
           ||||||||||||||||||||
Sbjct: 880 ctagatctaaatatgcaagc 861



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>gb|AC150901.2| Mus musculus BAC clone RP23-62N8 from 19, complete sequence
          Length = 220883

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      agaatgttggtttgaaccca 26
              ||||||||||||||||||||
Sbjct: 189894 agaatgttggtttgaaccca 189875



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>emb|AL844898.5| Mouse DNA sequence from clone RP23-346M17 on chromosome 2, complete
             sequence
          Length = 164288

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   gaggacttgagggtgaaaga 211
             ||||||||||||||||||||
Sbjct: 34369 gaggacttgagggtgaaaga 34388


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,867,834
Number of Sequences: 3902068
Number of extensions: 3867834
Number of successful extensions: 65871
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65791
Number of HSP's gapped (non-prelim): 80
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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