Clone Information

BLAST Search Result

Clone Name	baet116e05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	108	7e-24
2	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	105	4e-23
3	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	105	4e-23
4	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	48	1e-05
5	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	44	2e-04
6	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	42	6e-04
7	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	42	8e-04
8	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	42	8e-04
9	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	41	0.002
10	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	41	0.002
11	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	41	0.002
12	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	40	0.002
13	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	37	0.019
14	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	37	0.019
15	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	33	0.28
16	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	33	0.36
17	L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chlor...	33	0.47
18	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	32	0.62
19	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	32	0.62
20	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	32	0.81
21	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	32	1.1
22	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	32	1.1
23	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	32	1.1
24	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	32	1.1
25	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	32	1.1
26	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	31	1.4
27	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	31	1.4
28	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	31	1.4
29	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	31	1.4
30	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	31	1.4
31	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	31	1.4
32	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	31	1.4
33	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	31	1.4
34	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	31	1.4
35	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	31	1.4
36	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	31	1.4
37	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	31	1.4
38	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	31	1.4
39	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	31	1.4
40	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	31	1.8
41	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	31	1.8
42	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	30	2.3
43	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	30	2.3
44	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	30	2.3
45	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	30	2.3
46	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	30	2.3
47	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	30	2.3
48	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	30	2.3
49	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	30	3.1
50	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	30	3.1
51	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	30	3.1
52	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	30	3.1
53	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	30	3.1
54	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	30	3.1
55	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	30	3.1
56	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	30	3.1
57	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	30	3.1
58	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	30	3.1
59	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	30	3.1
60	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	30	3.1
61	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	30	3.1
62	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	30	3.1
63	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	30	3.1
64	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	30	3.1
65	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	30	3.1
66	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	30	4.0
67	PNKP_HUMAN (Q96T60) Bifunctional polynucleotide phosphatase/kina...	30	4.0
68	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	30	4.0
69	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	29	5.2
70	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	29	5.2
71	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	29	6.8
72	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	29	6.8
73	TIG_PROMM (Q7V991) Trigger factor (TF)	28	8.9
74	NORR1_RALEU (Q9K4V0) Nitric oxide reductase transcription regula...	28	8.9
75	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	28	8.9
76	AROA_THEMA (Q9WYI0) 3-phosphoshikimate 1-carboxyvinyltransferase...	28	8.9
77	POLN_HEVMY (Q04610) Non-structural polyprotein (EC 2.7.7.48) (RN...	28	8.9

>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score =  108 bits (270), Expect = 7e-24
 Identities = 49/77 (63%), Positives = 54/77 (70%)
 Frame = +2

Query: 236 KKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAAV 415
           KKSWIPA KS    ++P W                 KDPAFLKWYREAELIHGRWAMAAV
Sbjct: 52  KKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 111

Query: 416 LGIFIGQAYSGVPWFEA 466
           LGIF+GQA+SG+PWFEA
Sbjct: 112 LGIFVGQAWSGIPWFEA 128

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score =  105 bits (263), Expect = 4e-23
 Identities = 47/77 (61%), Positives = 53/77 (68%)
 Frame = +2

Query: 236 KKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAAV 415
           KKSWIPA +     ++P W                 KDPAFLKWYREAELIHGRWAMAAV
Sbjct: 52  KKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 111

Query: 416 LGIFIGQAYSGVPWFEA 466
           LGIF+GQA+SG+PWFEA
Sbjct: 112 LGIFVGQAWSGIPWFEA 128

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score =  105 bits (263), Expect = 4e-23
 Identities = 47/77 (61%), Positives = 53/77 (68%)
 Frame = +2

Query: 236 KKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAAV 415
           KKSWIPA K    F++P W                 KDPAFLKWYREAELIHGRWAM AV
Sbjct: 57  KKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAV 116

Query: 416 LGIFIGQAYSGVPWFEA 466
           LGIF+GQA++G+PWFEA
Sbjct: 117 LGIFVGQAWTGIPWFEA 133

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = +2

Query: 368 YREAELIHGRWAMAAVLGIFIGQAYSGVPWFEA 466
           +RE ELIHGRWAM A LG  + +A +GV W EA
Sbjct: 132 FRECELIHGRWAMLACLGALVAEATTGVSWVEA 164

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
 Frame = +2

Query: 236 KKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAAV 415
           K  W+P   S      P +                 +DP  LKW+ +AEL++GRWAM  V
Sbjct: 54  KGEWLPGLAS------PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGV 107

Query: 416 LGIFIGQAYSGV------PWFEA 466
            G+ + + ++ +       W++A
Sbjct: 108 AGMLLPEVFTKIGIINVPEWYDA 130

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 22/66 (33%), Positives = 25/66 (37%)
 Frame = +2

Query: 233 DKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAA 412
           D+  W P          P W                  DP  LKW  +AEL+H RWAM  
Sbjct: 64  DRPLWFPGSTP------PEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLG 117

Query: 413 VLGIFI 430
             GIFI
Sbjct: 118 AAGIFI 123



 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 350 PAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 448
           PA +K  R  E+ +GR AM AV+G +    Y+G
Sbjct: 212 PAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +2

Query: 368 YREAELIHGRWAMAAVLGIFIGQAYSGVPWFEA 466
           +RE ELIHGRWAM   LG    +A +G+ W +A
Sbjct: 137 FRECELIHGRWAMLGTLGAIAVEALTGIAWQDA 169

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 19/36 (52%), Positives = 24/36 (66%)
 Frame = +2

Query: 359 LKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFEA 466
           L+ +RE ELIHGRWAM A LG    +  +GV W +A
Sbjct: 130 LQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDA 165

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = +2

Query: 350 PAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFEA 466
           PA L+ Y+E+ELIH RWAM AV GI + +A     W +A
Sbjct: 78  PANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKA 116

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +2

Query: 368 YREAELIHGRWAMAAVLGIFIGQAYSGVPWFEA 466
           +RE ELIHGRWAM A LG    +  +GV W +A
Sbjct: 136 FRECELIHGRWAMLATLGALSVEWLTGVTWQDA 168

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 21/66 (31%), Positives = 26/66 (39%)
 Frame = +2

Query: 233 DKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAA 412
           D+  W P          P W                  DP  L+W ++AEL+H RWAM  
Sbjct: 64  DRPLWFPGSTP------PPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLG 117

Query: 413 VLGIFI 430
             GIFI
Sbjct: 118 AAGIFI 123



 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 350 PAFLKWYREAELIHGRWAMAAVLGIFIGQAYSG 448
           PA +K  R  E+ +GR AM AV+G +    Y+G
Sbjct: 212 PAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTG 244

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
 Frame = +2

Query: 233 DKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAA 412
           D+  W+  F ++     P++                  DP   K YRE E+IH RWA+  
Sbjct: 43  DRAKWLGPFSTNT----PAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98

Query: 413 VLGIFIGQ---AYSGVP-----WFEA 466
            LGI   +    Y+GV      WF+A
Sbjct: 99  ALGILTPELLSTYAGVKFGEPVWFKA 124

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ---AYSGVP-----WFEA 466
           DP     YRE ELIH RWA+   LGI   +    Y+GV      WF+A
Sbjct: 72  DPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKA 119

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP   K YRE ELIH RWAM   LG          G  +    WF+A
Sbjct: 75  DPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKA 121

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IHGRWAM   LG    +  A +GV + EA
Sbjct: 86  DPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEA 127

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = +2

Query: 284 PSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFE 463
           PSW                  DP   +  R AE+ HGR AM AV+G  +        W+E
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGKGIWYE 71

Query: 464 A 466
           A
Sbjct: 72  A 72



 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPWFEA 466
           DP      R AE+ HGR AM   +G  + +      WFEA
Sbjct: 218 DPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGKGAWFEA 257

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>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast|
           precursor
          Length = 270

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 368 YREAELIHGRWAMAAVLGIFIGQAYSGVPWF 460
           +RE+E+ HGR AM A LG  +G+     P F
Sbjct: 91  WRESEITHGRVAMLAALGFVVGEQLEDFPAF 121

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A SGV + EA
Sbjct: 90  DPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEA 131

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGVPW 457
           DP   +  +E EL HGR AM A  G    +A SG  W
Sbjct: 163 DPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSGDTW 199

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 8/48 (16%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGI--------FIGQAYSGVPWFEA 466
           DP      R  E+IHGRWAM   LG         ++G  +    WF+A
Sbjct: 88  DPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKA 135

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 91  DPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 137

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = +2

Query: 233 DKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAA 412
           D+  ++  F  +A    PS+                  DP      RE E+IH RWAM  
Sbjct: 52  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 107

Query: 413 VLGIFIGQ--AYSGVPWFEA 466
            LG    +  A +GV + EA
Sbjct: 108 ALGCVFPELLARNGVKFGEA 127

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 86  DPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKA 132

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 67  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKA 113

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 90  DPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 136

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 84  DPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 130

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 83  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 124

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 77  DPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 123

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 85  DPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 131

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 85  DPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 131

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 100 DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 141

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 100 DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 141

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 78  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 119

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
 Frame = +2

Query: 191 KPVTRRXXXXXXXXDKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWY 370
           KP T +        D+  ++  F  ++    PS+                  DP      
Sbjct: 41  KPKTVQSSSPWYGPDRVKYLGPFSGES----PSYLTGEFPGDYGWDTAGLSADPETFAKN 96

Query: 371 REAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 97  RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 88  DPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 129

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 88  DPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 129

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 87  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 50  DPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 96

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 87  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 87  DPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEA 128

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 87  DPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKA 133

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = +2

Query: 233 DKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAA 412
           D+  ++  F  +A    PS+                  DP      RE E+IH RWAM  
Sbjct: 54  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 109

Query: 413 VLGIFIGQ--AYSGVPWFEA 466
            LG    +  A +GV + EA
Sbjct: 110 ALGCVFPELFARNGVKFGEA 129

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = +2

Query: 233 DKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAA 412
           D+  ++  F  +A    PS+                  DP      RE E+IH RWAM  
Sbjct: 55  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 110

Query: 413 VLGIFIGQ--AYSGVPWFEA 466
            LG    +  A +GV + EA
Sbjct: 111 ALGCVFPELLARNGVKFGEA 130

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = +2

Query: 233 DKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAA 412
           D+  ++  F  +A    PS+                  DP      RE E+IH RWAM  
Sbjct: 55  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLG 110

Query: 413 VLGIFIGQ--AYSGVPWFEA 466
            LG    +  A +GV + EA
Sbjct: 111 ALGCVFPELLARNGVKFGEA 130

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = +2

Query: 233 DKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAA 412
           D+  ++  F  +A    PS+                  DP      RE E+IH RWAM  
Sbjct: 55  DRVKYLGPFSGEA----PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 110

Query: 413 VLGIFIGQ--AYSGVPWFEA 466
            LG    +  A +G+ + EA
Sbjct: 111 ALGCVFPELFARNGIKFGEA 130

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = +2

Query: 233 DKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAA 412
           D+  ++  F  +A    PS+                  DP      RE E+IH RWAM  
Sbjct: 55  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 110

Query: 413 VLGIFIGQ--AYSGVPWFEA 466
            LG    +  A +GV + EA
Sbjct: 111 ALGCVFPELFARNGVKFGEA 130

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 87  DPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKA 133

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 59  DPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKA 105

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 88  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 129

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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 88  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 129

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 88  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 129

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 87  DPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 88  DPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKA 134

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 344 KDPAFLKWYREAELIHGRWAMAAVLGIFIGQA 439
           K P     Y+  ELIH RWAM    G  I +A
Sbjct: 102 KKPENFAKYQAFELIHARWAMLGAAGFIIPEA 133

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 86  DPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEA 127

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 130

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 87  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 87  DPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 87  DPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 87  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 87  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 128

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH RWAM   LG          G  +    WF+A
Sbjct: 87  DPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVPWFEA 466
           DP      RE E+IH RWAM   LG    +  A +GV + EA
Sbjct: 96  DPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 137

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>PNKP_HUMAN (Q96T60) Bifunctional polynucleotide phosphatase/kinase|
           (Polynucleotide kinase-3'-phosphatase) (DNA
           5'-kinase/3'-phosphatase) [Includes: Polynucleotide
           3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase);
           Polynucleotide 5'-hydroxyl-kinase (
          Length = 521

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -1

Query: 385 QLGLPVPLEERRVLAKPRGVEAEVTGERAIEPGRVDELGIAFERGDPRLLVGG 227
           Q+ L    E R V  K  GV    TG + ++PG    LG+    GD   LV G
Sbjct: 50  QVELVADPETRTVAVKQLGVNPSTTGTQELKPGLEGSLGV----GDTLYLVNG 98

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLG 421
           DP      R  E+IHGRWAM   LG
Sbjct: 85  DPEAFAKNRALEVIHGRWAMLGALG 109

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = +2

Query: 233 DKKSWIPAFKSDAEFINPSWXXXXXXXXXXXXXXXXXKDPAFLKWYREAELIHGRWAMAA 412
           D+  ++  F  +A    PS+                  DPA     R+ E+IH RW M  
Sbjct: 54  DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLG 109

Query: 413 VLGIFIGQ--AYSGVPWFEA 466
            LG    +  A +GV + EA
Sbjct: 110 ALGCVFPELFARNGVKFGEA 129

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGI 424
           DP   K YRE ELIH R  +   LG+
Sbjct: 94  DPETFKRYRELELIHARCGLLGALGM 119

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFIGQ--AYSGVP-----WFEA 466
           DP      RE E+IH RWA+A  LG    +  A +GV      WF+A
Sbjct: 86  DPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKA 132

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
 Frame = +2

Query: 347 DPAFLKWYREAELIHGRWAMAAVLGIFI-------GQAYSGVPWFEA 466
           DP      RE E+IH  WAM   LG          G  +    WF+A
Sbjct: 28  DPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKA 74

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>TIG_PROMM (Q7V991) Trigger factor (TF)|
          Length = 479

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 364 LEERRVLAKPRGVEAEVTGERAIEPGRV 281
           +EE  + AK + V  E++GER I+P R+
Sbjct: 384 IEESEISAKVKEVSRELSGERDIDPARL 411

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>NORR1_RALEU (Q9K4V0) Nitric oxide reductase transcription regulator norR1|
          Length = 514

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -1

Query: 421 AQHRGHRPAPVDQLGLPVPLEERRVLAKPRGVEAEVTGERAIEPGRVD 278
           ++ RGH    V+   LP  L E  +    RG  +  TGER   PGR +
Sbjct: 232 SRRRGHPLVHVNCAALPESLAESELFGHARGAFSGATGER---PGRFE 276

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +2

Query: 344 KDPAFLKWYREAELIHGRWAMAAVLGIFIGQAYSGV 451
           KD   +K  +  E+ +GR AM A+LG FI    +GV
Sbjct: 213 KDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGV 248

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>AROA_THEMA (Q9WYI0) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 410

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -1

Query: 427 EDAQHRGHRPAPVDQLGLPVPLEERRVLAKP---RGVEAEVTGE 305
           E A+ R H    +  LG+PV +E  RV+ +P   RG   +V G+
Sbjct: 171 EPAKSRDHTERMLKNLGVPVEVEGTRVVLEPATFRGFTMKVPGD 214

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>POLN_HEVMY (Q04610) Non-structural polyprotein (EC 2.7.7.48) (RNA-directed RNA|
            polymerase/Helicase)
          Length = 1693

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 421  AQHRGHRPAPVDQLGLPVPLEERRVLAKPRGVEA 320
            A+  GHRP PV  +  P P  E+ +L  P+G+ A
Sbjct: 1246 AEELGHRPVPVAAVLPPCPELEQGLLYLPQGLTA 1279


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,629,883
Number of Sequences: 219361
Number of extensions: 546435
Number of successful extensions: 1933
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1930
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result