ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet116d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ANX4_FRAAN (P51074) Annexin-like protein RJ4 47 3e-05
2ANX13_MOUSE (Q99JG3) Annexin A13 (Annexin XIII) 33 0.29
3ANX13_CANFA (Q29471) Annexin A13 (Annexin XIII) (Annexin, intest... 32 0.64
4SYFA_CLOTE (Q891T7) Phenylalanyl-tRNA synthetase alpha chain (EC... 30 4.1
5PDXA_RHILO (Q984S6) 4-hydroxythreonine-4-phosphate dehydrogenase... 30 4.1
6BEM3_ASHGO (Q74ZH7) GTPase-activating protein BEM3 29 5.4
7TACC2_HUMAN (O95359) Transforming acidic coiled-coil-containing ... 29 7.1
8SYFA_MOOTA (Q2RHN7) Phenylalanyl-tRNA synthetase alpha chain (EC... 29 7.1
9XERC_NEIMB (Q9JXV6) Tyrosine recombinase xerC 28 9.2
10ANXA7_HUMAN (P20073) Annexin A7 (Annexin VII) (Synexin) 28 9.2

>ANX4_FRAAN (P51074) Annexin-like protein RJ4|
          Length = 314

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
 Frame = +1

Query: 94  DEVQALTKAFSGLGGLGVDERTMVAALANWRKQPEKRSGFRKSFPGLFKEHGGVMERCED 273
           ++ +AL K+  G G    +E+ +++ L +  +   +R   R ++  L++E          
Sbjct: 14  EDAEALRKSVKGWG---TNEKAIISILGH--RNAGQRKEIRAAYEQLYQE---------- 58

Query: 274 EYMLHLAAEFSR-FKNLMVLWAMHPWERDARLAHHVLHQAHPSA-IVVEIACTRSAEELL 447
           + +  L +E S  F+  +  W + P +RDA LA+  + ++     +++EI+C  S EELL
Sbjct: 59  DLLKPLESELSGDFEKAVYRWTLDPADRDAVLANVAIKKSTDVYNVIIEISCIHSPEELL 118

Query: 448 GARRAY 465
             RRAY
Sbjct: 119 AVRRAY 124



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>ANX13_MOUSE (Q99JG3) Annexin A13 (Annexin XIII)|
          Length = 316

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
 Frame = +1

Query: 115 KAFSGLGGLGVDERTMVAALANWRKQPEKRSGFRKSFPGLFKEHGGVMERCEDEYMLHLA 294
           K +    G+G DE  ++  L++  +  E+R   ++ +    +++G  +E         L 
Sbjct: 22  KLYKACKGMGTDEAAIIEVLSS--RTSEERQQIKQKYK---EKYGKDLEEV-------LN 69

Query: 295 AEFS-RFKNLMVLWAMHPWERDARLAHHVLHQAHPS-AIVVEIACTRSAEELLGARRAYM 468
           +E S  FK   +     P E  AR     +       A+++EI CTRS +E++  + AY 
Sbjct: 70  SELSGNFKKTALALLDRPNEYAARQLQKAMKGVGTDEAMLIEILCTRSNKEIVAIKEAYQ 129

Query: 469 AL 474
            L
Sbjct: 130 RL 131



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>ANX13_CANFA (Q29471) Annexin A13 (Annexin XIII) (Annexin, intestine-specific)|
           (ISA)
          Length = 315

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
 Frame = +1

Query: 136 GLGVDERTMVAALANWRKQPEKRSGFRKSFPGLFKEHGGVMERCEDEYMLHLAAEFSRFK 315
           G+G DE  ++  L++  +  ++R   ++ +   + +        E+ +   L+  F +  
Sbjct: 28  GMGTDEAAIIEILSS--RTSDERQQIKQKYKATYGKD------LEEVFKSDLSGNFEKTA 79

Query: 316 NLMVLWAMHPWERDARLAHHVLHQ-AHPSAIVVEIACTRSAEELLGARRAYMAL 474
             ++     P E DAR     +       A+++EI CTR+ +E++  + AY  L
Sbjct: 80  LALL---DRPSEYDARQLQKAMKGLGTDEAVLIEILCTRTNKEIMAIKEAYQRL 130



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>SYFA_CLOTE (Q891T7) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 339

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 109 LTKAFSGLGGLGVDERTMVAALAN 180
           LTK   G+GGL  +ER +V  LAN
Sbjct: 39  LTKILRGMGGLSAEERPIVGKLAN 62



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>PDXA_RHILO (Q984S6) 4-hydroxythreonine-4-phosphate dehydrogenase (EC|
           1.1.1.262) (4-(phosphohydroxy)-L-threonine
           dehydrogenase)
          Length = 342

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 31/112 (27%), Positives = 45/112 (40%)
 Frame = +1

Query: 82  ATMADEVQALTKAFSGLGGLGVDERTMVAALANWRKQPEKRSGFRKSFPGLFKEHGGVME 261
           A  A  V+A+ +A +    L  D   MV       K+P   +GFR  FPG          
Sbjct: 95  ANAAGTVEAIDRAVAAC--LAGDAAAMVTCPI--AKKPLYDAGFR--FPG---------- 138

Query: 262 RCEDEYMLHLAAEFSRFKNLMVLWAMHPWERDARLAHHVLHQAHPSAIVVEI 417
               EY+ HLAA  S  + + V+    P  R   +  H+     P A+  E+
Sbjct: 139 --HTEYLAHLAARHSGVEAMPVMMLAGPDLRTVPVTIHIALAEVPKALTTEL 188



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>BEM3_ASHGO (Q74ZH7) GTPase-activating protein BEM3|
          Length = 1013

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 338 IAHSTIRFLNRENSAARCSMYSSSHRSITPPCSLNSPGK 222
           I+ S+  + N   S A   +Y +S  SIT PC  NS  K
Sbjct: 182 ISRSSSSYSNTLGSPATSVLYKNSRISITSPCKSNSTSK 220



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>TACC2_HUMAN (O95359) Transforming acidic coiled-coil-containing protein 2 (Anti|
            Zuai-1) (AZU-1)
          Length = 1026

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = +1

Query: 103  QALTKAFSGLGGLGVDERTMVAALANWRKQPEKRSGFRKSFPGLFKEHGGVMERCEDEYM 282
            Q + +    L  L   E+++      + K  E   GFRK+          V++RC  EY+
Sbjct: 891  QLVLEKEQALADLNSVEKSLADLFRRYEKMKEVLEGFRKNEE--------VLKRCAQEYL 942

Query: 283  LHLAAEFSRFKNLMV 327
              +  E  R++ L V
Sbjct: 943  SRVKKEEQRYQALKV 957



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>SYFA_MOOTA (Q2RHN7) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 340

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
 Frame = +1

Query: 61  SLAILVRATMADEVQAL-----------TKAFSGLGGLGVDERTMVAALANWRKQPEKRS 207
           +LA +  AT ++E++AL           T+   G+G L  +ER  V  +AN         
Sbjct: 12  ALARVAAATSSEELEALRVRYLGKKGELTRVLRGMGKLPPEERPRVGQMAN--------- 62

Query: 208 GFRKSFPGLFKEHGGVMERCEDEYMLHLAA 297
             R+   G  KEH   + R E    L   A
Sbjct: 63  KVREELEGALKEHRENLSRREQAERLRAEA 92



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>XERC_NEIMB (Q9JXV6) Tyrosine recombinase xerC|
          Length = 301

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 85  TMADEVQALTKAFSGLGGLGVDERTMVAALANWRK 189
           T  D VQAL +    L G G+ ERT+   L++WR+
Sbjct: 53  TRGDFVQALRR----LSGRGLGERTLARKLSSWRQ 83



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>ANXA7_HUMAN (P20073) Annexin A7 (Annexin VII) (Synexin)|
          Length = 488

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
 Frame = +1

Query: 97  EVQALTKAFSGLGGLGVDERTMVAALANWRKQPEKRSGFRKSFPGLFKEHGGVMERCEDE 276
           + + L KA  G G    DE+ +V  +AN      + +  R+     FK   G       +
Sbjct: 190 DAEILRKAMKGFG---TDEQAIVDVVAN------RSNDQRQKIKAAFKTSYG------KD 234

Query: 277 YMLHLAAEFS-RFKNLMVLWAMHPWERDARLAHHVLHQAHPSA-IVVEIACTRSAEELLG 450
            +  L +E S   + L++   M P   DA      +  A     +++EI CTR+ +E+  
Sbjct: 235 LIKDLKSELSGNMEELILALFMPPTYYDAWSLRKAMQGAGTQERVLIEILCTRTNQEIRE 294

Query: 451 ARRAYMA 471
             R Y +
Sbjct: 295 IVRCYQS 301


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,557,189
Number of Sequences: 219361
Number of extensions: 672113
Number of successful extensions: 2478
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2477
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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