| Clone Name | baet116b08 |
|---|---|
| Clone Library Name | barley_pub |
>SUSY_LYCES (P49037) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 34.7 bits (78), Expect = 0.14 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = +2 Query: 251 VREFVLKPFPADAPPPACTKNHSVPGFVFSNRGFSGNLYHDYTDVLVPL--FLSTRKFKG 424 V E +PF A P P TK+ G F NR S ++HD + + PL FL +KG Sbjct: 132 VLELDFEPFTASFPKPTLTKSIG-NGVEFLNRHLSAKMFHD-KESMAPLLEFLRAHHYKG 189 Query: 425 EVQFL 439 + L Sbjct: 190 KTMML 194
>SUS2_SOLTU (P49039) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (SS65) Length = 805 Score = 34.7 bits (78), Expect = 0.14 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = +2 Query: 251 VREFVLKPFPADAPPPACTKNHSVPGFVFSNRGFSGNLYHDYTDVLVPL--FLSTRKFKG 424 V E +PF A P P TK+ G F NR S ++HD + + PL FL +KG Sbjct: 132 VLELDFEPFTASFPKPTLTKSIG-NGVEFLNRHLSAKMFHD-KESMTPLLEFLRVHHYKG 189 Query: 425 EVQFL 439 + L Sbjct: 190 KTMML 194
>SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (SS16) Length = 805 Score = 34.7 bits (78), Expect = 0.14 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = +2 Query: 251 VREFVLKPFPADAPPPACTKNHSVPGFVFSNRGFSGNLYHDYTDVLVPL--FLSTRKFKG 424 V E +PF A P P TK+ G F NR S ++HD + + PL FL +KG Sbjct: 132 VLELDFEPFTASFPKPTLTKSIG-NGVEFLNRHLSAKMFHD-KESMTPLLEFLRAHHYKG 189 Query: 425 EVQFL 439 + L Sbjct: 190 KTMML 194
>SUOX_HUMAN (P51687) Sulfite oxidase, mitochondrial precursor (EC 1.8.3.1)| Length = 488 Score = 32.3 bits (72), Expect = 0.70 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 5/61 (8%) Frame = +2 Query: 179 IDSLDREWRTKPYARYHDPVAMTHVREFVLK-----PFPADAPPPACTKNHSVPGFVFSN 343 I L+ E + P DP A VR LK PF A+ PP T+N+ P +F Sbjct: 100 IGELNPEDKVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELLTENYITPNPIFFT 159 Query: 344 R 346 R Sbjct: 160 R 160
>SUOX_MACFA (Q60HD0) Sulfite oxidase, mitochondrial precursor (EC 1.8.3.1)| Length = 488 Score = 32.0 bits (71), Expect = 0.91 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%) Frame = +2 Query: 179 IDSLDREWRTKPYARYHDPVAMTHVREFVLK-----PFPADAPPPACTKNHSVPGFVFSN 343 + L+ E + P DP A VR LK PF A+ PP T+N+ P +F Sbjct: 100 VGELNPEDKVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELLTENYITPNPIFFT 159 Query: 344 R 346 R Sbjct: 160 R 160
>TPSN_CANFA (Q5TJE4) Tapasin precursor (TPSN) (TPN) (TAP-binding protein)| Length = 449 Score = 30.8 bits (68), Expect = 2.0 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +2 Query: 215 YARYHDPVAMTHVREFVLKPFPADAPPPACTKNHSVP 325 Y + HDP ++ +P+DAPPP C + +P Sbjct: 65 YLKVHDPAGTLQA---AVRRYPSDAPPPHCELSRFIP 98
>NRAM_IARUE (P31510) Neuraminidase (EC 3.2.1.18)| Length = 470 Score = 30.8 bits (68), Expect = 2.0 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Frame = +2 Query: 230 DPVAMTHVREFVLKPFPADAP----PPACTKNHSVPGFVFSNRGFSGNLYHDYTDVLVPL 397 DPVAMTH +++ P D P P N PG +N G G Y D + + Sbjct: 308 DPVAMTHTSQYICSPVLTDNPRPNDPTVGKCNDPYPG--NNNNGVKGFSYLDGGNTWLGR 365 Query: 398 FLSTRKFKG 424 +ST G Sbjct: 366 TISTASRSG 374
>PME3_PHAVU (Q43111) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 581 Score = 30.0 bits (66), Expect = 3.5 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = -1 Query: 213 GLVLHSLSSESM*MVEALPTTRMSPAAS 130 G+V+H+ +SES +++P T +SPAAS Sbjct: 49 GVVIHNRNSESSPSSDSVPQTELSPAAS 76
>NRAM_IAWHM (P05803) Neuraminidase (EC 3.2.1.18)| Length = 470 Score = 30.0 bits (66), Expect = 3.5 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Frame = +2 Query: 230 DPVAMTHVREFVLKPFPADAP----PPACTKNHSVPGFVFSNRGFSGNLYHD 373 DPVAMTH +++ P D P P N PG +N G G Y D Sbjct: 308 DPVAMTHTSQYICSPVLTDNPRPNDPTVGKCNDPYPG--NNNNGVKGFSYLD 357
>NRAM_IATRA (P03472) Neuraminidase (EC 3.2.1.18)| Length = 470 Score = 30.0 bits (66), Expect = 3.5 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Frame = +2 Query: 230 DPVAMTHVREFVLKPFPADAP----PPACTKNHSVPGFVFSNRGFSGNLYHD 373 DPVAMTH +++ P D P P N PG +N G G Y D Sbjct: 308 DPVAMTHTSQYICSPVLTDNPRPNDPTVGKCNDPYPG--NNNNGVKGFSYLD 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,931,990 Number of Sequences: 219361 Number of extensions: 660754 Number of successful extensions: 2305 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2215 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2305 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)