| Clone Name | baet116b08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464042.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1955 Score = 202 bits (102), Expect = 8e-49 Identities = 162/182 (89%) Strand = Plus / Plus Query: 294 cgccggcgtgcaccaagaaccactccgtccccgggttcgtgttctccaaccgcggcttct 353 ||||||||||||||| ||||||||| ||||| | ||||| ||||||||| ||||||||| Sbjct: 708 cgccggcgtgcaccaggaaccactcggtcccggccttcgtcttctccaacggcggcttct 767 Query: 354 ccggcaacctgtaccacgactacacggacgtgctggtgccgctcttcctcagcacccgca 413 ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| | Sbjct: 768 ccggcaacctgtaccacgactacaccgacgtgctcgtgccgctgttcctcagcacccacc 827 Query: 414 agttcaagggcgaggtgcagttcctgctcagcgacctcaagccgtggtgggtggccaagt 473 ||||||||||| ||||||||||| ||||||| | |||||||| ||||||||| ||||| Sbjct: 828 agttcaagggccaggtgcagttcttgctcagtgggctcaagccatggtgggtgaacaagt 887 Query: 474 tc 475 || Sbjct: 888 tc 889 Score = 141 bits (71), Expect = 2e-30 Identities = 146/171 (85%) Strand = Plus / Plus Query: 92 ccgacctgcttcatgacgagcaagcgttcggagcggtgcgaggcggcgggggacatccgg 151 ||||||||| ||||||||||||||| |||||||||||||||||| |||||||| || Sbjct: 512 ccgacctgccgcatgacgagcaagcggtcggagcggtgcgaggcgagaggggacattcgt 571 Query: 152 gtggtcggcaacgcctccaccatctacatcgactcgctggacagggaatggaggaccaag 211 |||| || ||||| |||||||||||||||| | | | |||| ||| |||| ||| ||| Sbjct: 572 gtggaggggaacgcgtccaccatctacatcggcgggatcgacaaggagtggaagacgaag 631 Query: 212 ccgtacgcgcggtaccacgaccccgtcgccatgacccacgtccgggagttc 262 ||||||||||||||||||||||||||||||||| || |||||| |||||| Sbjct: 632 ccgtacgcgcggtaccacgaccccgtcgccatggccgtcgtccgcgagttc 682
>ref|XM_464043.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1965 Score = 202 bits (102), Expect = 8e-49 Identities = 162/182 (89%) Strand = Plus / Plus Query: 294 cgccggcgtgcaccaagaaccactccgtccccgggttcgtgttctccaaccgcggcttct 353 ||||||||||||||| ||||||||| ||||| | ||||| ||||||||| ||||||||| Sbjct: 783 cgccggcgtgcaccaggaaccactcggtcccggccttcgtcttctccaacggcggcttct 842 Query: 354 ccggcaacctgtaccacgactacacggacgtgctggtgccgctcttcctcagcacccgca 413 ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| | Sbjct: 843 ccggcaacctgtaccacgactacaccgacgtgctcgtgccgctgttcctcagcacccacc 902 Query: 414 agttcaagggcgaggtgcagttcctgctcagcgacctcaagccgtggtgggtggccaagt 473 ||||||||||| ||||||||||| ||||||| | |||||||| ||||||||| ||||| Sbjct: 903 agttcaagggccaggtgcagttcttgctcagtgggctcaagccatggtgggtgaacaagt 962 Query: 474 tc 475 || Sbjct: 963 tc 964 Score = 141 bits (71), Expect = 2e-30 Identities = 146/171 (85%) Strand = Plus / Plus Query: 92 ccgacctgcttcatgacgagcaagcgttcggagcggtgcgaggcggcgggggacatccgg 151 ||||||||| ||||||||||||||| |||||||||||||||||| |||||||| || Sbjct: 587 ccgacctgccgcatgacgagcaagcggtcggagcggtgcgaggcgagaggggacattcgt 646 Query: 152 gtggtcggcaacgcctccaccatctacatcgactcgctggacagggaatggaggaccaag 211 |||| || ||||| |||||||||||||||| | | | |||| ||| |||| ||| ||| Sbjct: 647 gtggaggggaacgcgtccaccatctacatcggcgggatcgacaaggagtggaagacgaag 706 Query: 212 ccgtacgcgcggtaccacgaccccgtcgccatgacccacgtccgggagttc 262 ||||||||||||||||||||||||||||||||| || |||||| |||||| Sbjct: 707 ccgtacgcgcggtaccacgaccccgtcgccatggccgtcgtccgcgagttc 757
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 202 bits (102), Expect = 8e-49 Identities = 162/182 (89%) Strand = Plus / Plus Query: 294 cgccggcgtgcaccaagaaccactccgtccccgggttcgtgttctccaaccgcggcttct 353 ||||||||||||||| ||||||||| ||||| | ||||| ||||||||| ||||||||| Sbjct: 1873573 cgccggcgtgcaccaggaaccactcggtcccggccttcgtcttctccaacggcggcttct 1873632 Query: 354 ccggcaacctgtaccacgactacacggacgtgctggtgccgctcttcctcagcacccgca 413 ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| | Sbjct: 1873633 ccggcaacctgtaccacgactacaccgacgtgctcgtgccgctgttcctcagcacccacc 1873692 Query: 414 agttcaagggcgaggtgcagttcctgctcagcgacctcaagccgtggtgggtggccaagt 473 ||||||||||| ||||||||||| ||||||| | |||||||| ||||||||| ||||| Sbjct: 1873693 agttcaagggccaggtgcagttcttgctcagtgggctcaagccatggtgggtgaacaagt 1873752 Query: 474 tc 475 || Sbjct: 1873753 tc 1873754 Score = 141 bits (71), Expect = 2e-30 Identities = 146/171 (85%) Strand = Plus / Plus Query: 92 ccgacctgcttcatgacgagcaagcgttcggagcggtgcgaggcggcgggggacatccgg 151 ||||||||| ||||||||||||||| |||||||||||||||||| |||||||| || Sbjct: 1873377 ccgacctgccgcatgacgagcaagcggtcggagcggtgcgaggcgagaggggacattcgt 1873436 Query: 152 gtggtcggcaacgcctccaccatctacatcgactcgctggacagggaatggaggaccaag 211 |||| || ||||| |||||||||||||||| | | | |||| ||| |||| ||| ||| Sbjct: 1873437 gtggaggggaacgcgtccaccatctacatcggcgggatcgacaaggagtggaagacgaag 1873496 Query: 212 ccgtacgcgcggtaccacgaccccgtcgccatgacccacgtccgggagttc 262 ||||||||||||||||||||||||||||||||| || |||||| |||||| Sbjct: 1873497 ccgtacgcgcggtaccacgaccccgtcgccatggccgtcgtccgcgagttc 1873547 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 328 gttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 ||||||| |||||| | |||| ||| | ||||||| || ||||||||||||||||||||| Sbjct: 13495955 gttcgtgctctccaccggcgggttcacgggcaacccgttccacgactacacggacgtgct 13496014 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccgtcgtctccggcgccggcg 47 ||||||||||||||||||||| Sbjct: 34814312 ccgtcgtctccggcgccggcg 34814332 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gccgtcgtctccggcgccgg 45 |||||||||||||||||||| Sbjct: 32320523 gccgtcgtctccggcgccgg 32320542 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 12128223 cgtcgtctccggcgccggcg 12128204
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 202 bits (102), Expect = 8e-49 Identities = 162/182 (89%) Strand = Plus / Plus Query: 294 cgccggcgtgcaccaagaaccactccgtccccgggttcgtgttctccaaccgcggcttct 353 ||||||||||||||| ||||||||| ||||| | ||||| ||||||||| ||||||||| Sbjct: 13134 cgccggcgtgcaccaggaaccactcggtcccggccttcgtcttctccaacggcggcttct 13193 Query: 354 ccggcaacctgtaccacgactacacggacgtgctggtgccgctcttcctcagcacccgca 413 ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| | Sbjct: 13194 ccggcaacctgtaccacgactacaccgacgtgctcgtgccgctgttcctcagcacccacc 13253 Query: 414 agttcaagggcgaggtgcagttcctgctcagcgacctcaagccgtggtgggtggccaagt 473 ||||||||||| ||||||||||| ||||||| | |||||||| ||||||||| ||||| Sbjct: 13254 agttcaagggccaggtgcagttcttgctcagtgggctcaagccatggtgggtgaacaagt 13313 Query: 474 tc 475 || Sbjct: 13314 tc 13315 Score = 141 bits (71), Expect = 2e-30 Identities = 146/171 (85%) Strand = Plus / Plus Query: 92 ccgacctgcttcatgacgagcaagcgttcggagcggtgcgaggcggcgggggacatccgg 151 ||||||||| ||||||||||||||| |||||||||||||||||| |||||||| || Sbjct: 12938 ccgacctgccgcatgacgagcaagcggtcggagcggtgcgaggcgagaggggacattcgt 12997 Query: 152 gtggtcggcaacgcctccaccatctacatcgactcgctggacagggaatggaggaccaag 211 |||| || ||||| |||||||||||||||| | | | |||| ||| |||| ||| ||| Sbjct: 12998 gtggaggggaacgcgtccaccatctacatcggcgggatcgacaaggagtggaagacgaag 13057 Query: 212 ccgtacgcgcggtaccacgaccccgtcgccatgacccacgtccgggagttc 262 ||||||||||||||||||||||||||||||||| || |||||| |||||| Sbjct: 13058 ccgtacgcgcggtaccacgaccccgtcgccatggccgtcgtccgcgagttc 13108
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585B01 Length = 133231 Score = 202 bits (102), Expect = 8e-49 Identities = 162/182 (89%) Strand = Plus / Plus Query: 294 cgccggcgtgcaccaagaaccactccgtccccgggttcgtgttctccaaccgcggcttct 353 ||||||||||||||| ||||||||| ||||| | ||||| ||||||||| ||||||||| Sbjct: 110217 cgccggcgtgcaccaggaaccactcggtcccggccttcgtcttctccaacggcggcttct 110276 Query: 354 ccggcaacctgtaccacgactacacggacgtgctggtgccgctcttcctcagcacccgca 413 ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| | Sbjct: 110277 ccggcaacctgtaccacgactacaccgacgtgctcgtgccgctgttcctcagcacccacc 110336 Query: 414 agttcaagggcgaggtgcagttcctgctcagcgacctcaagccgtggtgggtggccaagt 473 ||||||||||| ||||||||||| ||||||| | |||||||| ||||||||| ||||| Sbjct: 110337 agttcaagggccaggtgcagttcttgctcagtgggctcaagccatggtgggtgaacaagt 110396 Query: 474 tc 475 || Sbjct: 110397 tc 110398 Score = 141 bits (71), Expect = 2e-30 Identities = 146/171 (85%) Strand = Plus / Plus Query: 92 ccgacctgcttcatgacgagcaagcgttcggagcggtgcgaggcggcgggggacatccgg 151 ||||||||| ||||||||||||||| |||||||||||||||||| |||||||| || Sbjct: 110021 ccgacctgccgcatgacgagcaagcggtcggagcggtgcgaggcgagaggggacattcgt 110080 Query: 152 gtggtcggcaacgcctccaccatctacatcgactcgctggacagggaatggaggaccaag 211 |||| || ||||| |||||||||||||||| | | | |||| ||| |||| ||| ||| Sbjct: 110081 gtggaggggaacgcgtccaccatctacatcggcgggatcgacaaggagtggaagacgaag 110140 Query: 212 ccgtacgcgcggtaccacgaccccgtcgccatgacccacgtccgggagttc 262 ||||||||||||||||||||||||||||||||| || |||||| |||||| Sbjct: 110141 ccgtacgcgcggtaccacgaccccgtcgccatggccgtcgtccgcgagttc 110191
>dbj|AK065605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033I23, full insert sequence Length = 1955 Score = 202 bits (102), Expect = 8e-49 Identities = 162/182 (89%) Strand = Plus / Plus Query: 294 cgccggcgtgcaccaagaaccactccgtccccgggttcgtgttctccaaccgcggcttct 353 ||||||||||||||| ||||||||| ||||| | ||||| ||||||||| ||||||||| Sbjct: 708 cgccggcgtgcaccaggaaccactcggtcccggccttcgtcttctccaacggcggcttct 767 Query: 354 ccggcaacctgtaccacgactacacggacgtgctggtgccgctcttcctcagcacccgca 413 ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| | Sbjct: 768 ccggcaacctgtaccacgactacaccgacgtgctcgtgccgctgttcctcagcacccacc 827 Query: 414 agttcaagggcgaggtgcagttcctgctcagcgacctcaagccgtggtgggtggccaagt 473 ||||||||||| ||||||||||| ||||||| | |||||||| ||||||||| ||||| Sbjct: 828 agttcaagggccaggtgcagttcttgctcagtgggctcaagccatggtgggtgaacaagt 887 Query: 474 tc 475 || Sbjct: 888 tc 889 Score = 141 bits (71), Expect = 2e-30 Identities = 146/171 (85%) Strand = Plus / Plus Query: 92 ccgacctgcttcatgacgagcaagcgttcggagcggtgcgaggcggcgggggacatccgg 151 ||||||||| ||||||||||||||| |||||||||||||||||| |||||||| || Sbjct: 512 ccgacctgccgcatgacgagcaagcggtcggagcggtgcgaggcgagaggggacattcgt 571 Query: 152 gtggtcggcaacgcctccaccatctacatcgactcgctggacagggaatggaggaccaag 211 |||| || ||||| |||||||||||||||| | | | |||| ||| |||| ||| ||| Sbjct: 572 gtggaggggaacgcgtccaccatctacatcggcgggatcgacaaggagtggaagacgaag 631 Query: 212 ccgtacgcgcggtaccacgaccccgtcgccatgacccacgtccgggagttc 262 ||||||||||||||||||||||||||||||||| || |||||| |||||| Sbjct: 632 ccgtacgcgcggtaccacgaccccgtcgccatggccgtcgtccgcgagttc 682
>dbj|AK119583.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-C05, full insert sequence Length = 1965 Score = 194 bits (98), Expect = 2e-46 Identities = 161/182 (88%) Strand = Plus / Plus Query: 294 cgccggcgtgcaccaagaaccactccgtccccgggttcgtgttctccaaccgcggcttct 353 |||||||||| |||| ||||||||| ||||| | ||||| ||||||||| ||||||||| Sbjct: 783 cgccggcgtgtaccaggaaccactcggtcccggccttcgtcttctccaacggcggcttct 842 Query: 354 ccggcaacctgtaccacgactacacggacgtgctggtgccgctcttcctcagcacccgca 413 ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| | Sbjct: 843 ccggcaacctgtaccacgactacaccgacgtgctcgtgccgctgttcctcagcacccacc 902 Query: 414 agttcaagggcgaggtgcagttcctgctcagcgacctcaagccgtggtgggtggccaagt 473 ||||||||||| ||||||||||| ||||||| | |||||||| ||||||||| ||||| Sbjct: 903 agttcaagggccaggtgcagttcttgctcagtgggctcaagccatggtgggtgaacaagt 962 Query: 474 tc 475 || Sbjct: 963 tc 964 Score = 141 bits (71), Expect = 2e-30 Identities = 146/171 (85%) Strand = Plus / Plus Query: 92 ccgacctgcttcatgacgagcaagcgttcggagcggtgcgaggcggcgggggacatccgg 151 ||||||||| ||||||||||||||| |||||||||||||||||| |||||||| || Sbjct: 587 ccgacctgccgcatgacgagcaagcggtcggagcggtgcgaggcgagaggggacattcgt 646 Query: 152 gtggtcggcaacgcctccaccatctacatcgactcgctggacagggaatggaggaccaag 211 |||| || ||||| |||||||||||||||| | | | |||| ||| |||| ||| ||| Sbjct: 647 gtggaggggaacgcgtccaccatctacatcggcgggatcgacaaggagtggaagacgaag 706 Query: 212 ccgtacgcgcggtaccacgaccccgtcgccatgacccacgtccgggagttc 262 ||||||||||||||||||||||||||||||||| || |||||| |||||| Sbjct: 707 ccgtacgcgcggtaccacgaccccgtcgccatggccgtcgtccgcgagttc 757
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 103 bits (52), Expect = 5e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 311 aaccactccgtccccgggttcgtgttctccaaccgcggcttctccggcaacctgtaccac 370 |||||||||||||| | |||| | ||||||| | |||||||| |||||||||||||||| Sbjct: 29369729 aaccactccgtcccggcgttcctcttctccagcggcggcttcgccggcaacctgtaccat 29369670 Query: 371 gactacacggacgtgctggtgccgctcttcctcagcacccgcaagttcaagggcgaggtg 430 |||||||| |||||||| || ||||||||| ||||||| | | ||| ||||||||| Sbjct: 29369669 gactacaccgacgtgctcgtcccgctcttcaccagcaccaaccacttcggcggcgaggtg 29369610 Query: 431 cagttcctgctcagcg 446 |||||| ||||||||| Sbjct: 29369609 cagttcttgctcagcg 29369594 Score = 95.6 bits (48), Expect = 1e-16 Identities = 129/156 (82%) Strand = Plus / Minus Query: 107 acgagcaagcgttcggagcggtgcgaggcggcgggggacatccgggtggtcggcaacgcc 166 ||||||||||| ||||||||||||| || | ||| |||||||| || | ||||||| | Sbjct: 29369942 acgagcaagcggtcggagcggtgcgccgccgtgggcgacatccgcgtcgacggcaaccac 29369883 Query: 167 tccaccatctacatcgactcgctggacagggaatggaggaccaagccgtacgcgcggtac 226 |||| ||||||||| || |||| |||| ||| ||||| ||||||||||||||||| | Sbjct: 29369882 tccaagatctacatcaacccgctcgacaaggagtggagaaccaagccgtacgcgcgcctc 29369823 Query: 227 cacgaccccgtcgccatgacccacgtccgggagttc 262 |||||| ||||||||||| | |||| ||||||||| Sbjct: 29369822 cacgacgccgtcgccatggacgacgtgcgggagttc 29369787 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 422 ggcgaggtgcagttcctgctcagcgacctcaagccgtggtgggtggccaagttc 475 ||||||||||||||||| ||| | || ||||||||||||||||| ||||||| Sbjct: 15384721 ggcgaggtgcagttcctcatcaccaacttcaagccgtggtgggtgcacaagttc 15384774
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 103 bits (52), Expect = 5e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 311 aaccactccgtccccgggttcgtgttctccaaccgcggcttctccggcaacctgtaccac 370 |||||||||||||| | |||| | ||||||| | |||||||| |||||||||||||||| Sbjct: 80610 aaccactccgtcccggcgttcctcttctccagcggcggcttcgccggcaacctgtaccat 80551 Query: 371 gactacacggacgtgctggtgccgctcttcctcagcacccgcaagttcaagggcgaggtg 430 |||||||| |||||||| || ||||||||| ||||||| | | ||| ||||||||| Sbjct: 80550 gactacaccgacgtgctcgtcccgctcttcaccagcaccaaccacttcggcggcgaggtg 80491 Query: 431 cagttcctgctcagcg 446 |||||| ||||||||| Sbjct: 80490 cagttcttgctcagcg 80475 Score = 95.6 bits (48), Expect = 1e-16 Identities = 129/156 (82%) Strand = Plus / Minus Query: 107 acgagcaagcgttcggagcggtgcgaggcggcgggggacatccgggtggtcggcaacgcc 166 ||||||||||| ||||||||||||| || | ||| |||||||| || | ||||||| | Sbjct: 80823 acgagcaagcggtcggagcggtgcgccgccgtgggcgacatccgcgtcgacggcaaccac 80764 Query: 167 tccaccatctacatcgactcgctggacagggaatggaggaccaagccgtacgcgcggtac 226 |||| ||||||||| || |||| |||| ||| ||||| ||||||||||||||||| | Sbjct: 80763 tccaagatctacatcaacccgctcgacaaggagtggagaaccaagccgtacgcgcgcctc 80704 Query: 227 cacgaccccgtcgccatgacccacgtccgggagttc 262 |||||| ||||||||||| | |||| ||||||||| Sbjct: 80703 cacgacgccgtcgccatggacgacgtgcgggagttc 80668
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 103 bits (52), Expect = 5e-19 Identities = 115/136 (84%) Strand = Plus / Minus Query: 311 aaccactccgtccccgggttcgtgttctccaaccgcggcttctccggcaacctgtaccac 370 |||||||||||||| | |||| | ||||||| | |||||||| |||||||||||||||| Sbjct: 132527 aaccactccgtcccggcgttcctcttctccagcggcggcttcgccggcaacctgtaccat 132468 Query: 371 gactacacggacgtgctggtgccgctcttcctcagcacccgcaagttcaagggcgaggtg 430 |||||||| |||||||| || ||||||||| ||||||| | | ||| ||||||||| Sbjct: 132467 gactacaccgacgtgctcgtcccgctcttcaccagcaccaaccacttcggcggcgaggtg 132408 Query: 431 cagttcctgctcagcg 446 |||||| ||||||||| Sbjct: 132407 cagttcttgctcagcg 132392 Score = 95.6 bits (48), Expect = 1e-16 Identities = 129/156 (82%) Strand = Plus / Minus Query: 107 acgagcaagcgttcggagcggtgcgaggcggcgggggacatccgggtggtcggcaacgcc 166 ||||||||||| ||||||||||||| || | ||| |||||||| || | ||||||| | Sbjct: 132740 acgagcaagcggtcggagcggtgcgccgccgtgggcgacatccgcgtcgacggcaaccac 132681 Query: 167 tccaccatctacatcgactcgctggacagggaatggaggaccaagccgtacgcgcggtac 226 |||| ||||||||| || |||| |||| ||| ||||| ||||||||||||||||| | Sbjct: 132680 tccaagatctacatcaacccgctcgacaaggagtggagaaccaagccgtacgcgcgcctc 132621 Query: 227 cacgaccccgtcgccatgacccacgtccgggagttc 262 |||||| ||||||||||| | |||| ||||||||| Sbjct: 132620 cacgacgccgtcgccatggacgacgtgcgggagttc 132585
>dbj|AK071568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103D13, full insert sequence Length = 1696 Score = 103 bits (52), Expect = 5e-19 Identities = 115/136 (84%) Strand = Plus / Plus Query: 311 aaccactccgtccccgggttcgtgttctccaaccgcggcttctccggcaacctgtaccac 370 |||||||||||||| | |||| | ||||||| | |||||||| |||||||||||||||| Sbjct: 544 aaccactccgtcccggcgttcctcttctccagcggcggcttcgccggcaacctgtaccat 603 Query: 371 gactacacggacgtgctggtgccgctcttcctcagcacccgcaagttcaagggcgaggtg 430 |||||||| |||||||| || ||||||||| ||||||| | | ||| ||||||||| Sbjct: 604 gactacaccgacgtgctcgtcccgctcttcaccagcaccaaccacttcggcggcgaggtg 663 Query: 431 cagttcctgctcagcg 446 |||||| ||||||||| Sbjct: 664 cagttcttgctcagcg 679 Score = 95.6 bits (48), Expect = 1e-16 Identities = 129/156 (82%) Strand = Plus / Plus Query: 107 acgagcaagcgttcggagcggtgcgaggcggcgggggacatccgggtggtcggcaacgcc 166 ||||||||||| ||||||||||||| || | ||| |||||||| || | ||||||| | Sbjct: 331 acgagcaagcggtcggagcggtgcgccgccgtgggcgacatccgcgtcgacggcaaccac 390 Query: 167 tccaccatctacatcgactcgctggacagggaatggaggaccaagccgtacgcgcggtac 226 |||| ||||||||| || |||| |||| ||| ||||| ||||||||||||||||| | Sbjct: 391 tccaagatctacatcaacccgctcgacaaggagtggagaaccaagccgtacgcgcgcctc 450 Query: 227 cacgaccccgtcgccatgacccacgtccgggagttc 262 |||||| ||||||||||| | |||| ||||||||| Sbjct: 451 cacgacgccgtcgccatggacgacgtgcgggagttc 486
>dbj|AK059411.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C09, full insert sequence Length = 1619 Score = 103 bits (52), Expect = 5e-19 Identities = 115/136 (84%) Strand = Plus / Plus Query: 311 aaccactccgtccccgggttcgtgttctccaaccgcggcttctccggcaacctgtaccac 370 |||||||||||||| | |||| | ||||||| | |||||||| |||||||||||||||| Sbjct: 553 aaccactccgtcccggcgttcctcttctccagcggcggcttcgccggcaacctgtaccat 612 Query: 371 gactacacggacgtgctggtgccgctcttcctcagcacccgcaagttcaagggcgaggtg 430 |||||||| |||||||| || ||||||||| ||||||| | | ||| ||||||||| Sbjct: 613 gactacaccgacgtgctcgtcccgctcttcaccagcaccaaccacttcggcggcgaggtg 672 Query: 431 cagttcctgctcagcg 446 |||||| ||||||||| Sbjct: 673 cagttcttgctcagcg 688 Score = 95.6 bits (48), Expect = 1e-16 Identities = 129/156 (82%) Strand = Plus / Plus Query: 107 acgagcaagcgttcggagcggtgcgaggcggcgggggacatccgggtggtcggcaacgcc 166 ||||||||||| ||||||||||||| || | ||| |||||||| || | ||||||| | Sbjct: 340 acgagcaagcggtcggagcggtgcgccgccgtgggcgacatccgcgtcgacggcaaccac 399 Query: 167 tccaccatctacatcgactcgctggacagggaatggaggaccaagccgtacgcgcggtac 226 |||| ||||||||| || |||| |||| ||| ||||| ||||||||||||||||| | Sbjct: 400 tccaagatctacatcaacccgctcgacaaggagtggagaaccaagccgtacgcgcgcctc 459 Query: 227 cacgaccccgtcgccatgacccacgtccgggagttc 262 |||||| ||||||||||| | |||| ||||||||| Sbjct: 460 cacgacgccgtcgccatggacgacgtgcgggagttc 495
>emb|AJ867401.1| Sorghum bicolor mRNA for glycosyltransferase (a4 gene) Length = 1476 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 328 gttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 ||||||| |||||| |||||||| | ||||||| || ||||||||||||||||||||| Sbjct: 555 gttcgtgctctccacgggcggcttcacgggcaacccgttccacgactacacggacgtgct 614 Query: 388 g 388 | Sbjct: 615 g 615 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 180 tcgactcgctggacagggaatggaggaccaagccgtac 217 |||||||||||||| |||| |||| ||||||||||||| Sbjct: 410 tcgactcgctggaccgggagtggaagaccaagccgtac 447
>ref|XM_465334.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2105 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 328 gttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 ||||||| |||||| | |||| ||| | ||||||| || ||||||||||||||||||||| Sbjct: 644 gttcgtgctctccaccggcgggttcacgggcaacccgttccacgactacacggacgtgct 703
>ref|XM_506798.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1116_E03.25-2 mRNA Length = 2752 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 328 gttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 ||||||| |||||| | |||| ||| | ||||||| || ||||||||||||||||||||| Sbjct: 888 gttcgtgctctccaccggcgggttcacgggcaacccgttccacgactacacggacgtgct 947
>ref|XM_465333.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2103 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 328 gttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 ||||||| |||||| | |||| ||| | ||||||| || ||||||||||||||||||||| Sbjct: 894 gttcgtgctctccaccggcgggttcacgggcaacccgttccacgactacacggacgtgct 953
>dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0037J12 Length = 118553 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 328 gttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 ||||||| |||||| | |||| ||| | ||||||| || ||||||||||||||||||||| Sbjct: 11260 gttcgtgctctccaccggcgggttcacgggcaacccgttccacgactacacggacgtgct 11319
>dbj|AP004177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E03 Length = 126845 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 328 gttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 ||||||| |||||| | |||| ||| | ||||||| || ||||||||||||||||||||| Sbjct: 81884 gttcgtgctctccaccggcgggttcacgggcaacccgttccacgactacacggacgtgct 81943
>dbj|AK103231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123E06, full insert sequence Length = 2101 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 328 gttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 ||||||| |||||| | |||| ||| | ||||||| || ||||||||||||||||||||| Sbjct: 892 gttcgtgctctccaccggcgggttcacgggcaacccgttccacgactacacggacgtgct 951
>dbj|AK100151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015H06, full insert sequence Length = 2751 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 328 gttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 ||||||| |||||| | |||| ||| | ||||||| || ||||||||||||||||||||| Sbjct: 887 gttcgtgctctccaccggcgggttcacgggcaacccgttccacgactacacggacgtgct 946
>dbj|AK063938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-D12, full insert sequence Length = 2105 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 328 gttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 ||||||| |||||| | |||| ||| | ||||||| || ||||||||||||||||||||| Sbjct: 644 gttcgtgctctccaccggcgggttcacgggcaacccgttccacgactacacggacgtgct 703
>gb|AY596544.1| Saccharum officinarum clone SCCCCL3140E04, complete sequence Length = 1525 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 345 gcggcttctccggcaacctgtaccacgactacacggacgtgct 387 |||||||| | ||||||| || ||||||||||||||||||||| Sbjct: 700 gcggcttcacgggcaacccgttccacgactacacggacgtgct 742 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 180 tcgactcgctggacagggaatggaggaccaagccgtac 217 |||||| ||||||| |||| |||| ||||||||||||| Sbjct: 538 tcgacttgctggaccgggagtggaagaccaagccgtac 575
>emb|AJ867404.1| Triticum aestivum partial mRNA for glycosyltransferase (a4 gene) Length = 1425 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 329 ttcgtgttctccaaccgcggcttctccggcaacctgtaccacgactacacggacgtgct 387 |||||| |||||| | |||| ||| ||||||||| | ||||||||||||||||||||| Sbjct: 399 ttcgtgatctccaccggcgggttcaccggcaaccccttccacgactacacggacgtgct 457
>emb|AJ867403.1| Zea mays mRNA for glycosyltransferase (a4 gene) Length = 1514 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 345 gcggcttctccggcaacctgtaccacgactacacggacgtgct 387 |||| ||| ||||||||| || ||||||||||||||||||||| Sbjct: 596 gcgggttcaccggcaacccgttccacgactacacggacgtgct 638 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 182 gactcgctggacagggaatggaggaccaagccgtac 217 |||||||||||| |||| |||| ||||||||||||| Sbjct: 436 gactcgctggaccgggagtggaagaccaagccgtac 471
>emb|AJ867402.1| Saccharum officinarum mRNA for glycosyltransferase (a4 gene) Length = 1580 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 345 gcggcttctccggcaacctgtaccacgactacacggacgtgct 387 |||||||| | ||||||| || ||||||||||||||||||||| Sbjct: 679 gcggcttcacgggcaacccgttccacgactacacggacgtgct 721 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 180 tcgactcgctggacagggaatggaggaccaagccgtac 217 |||||| ||||||| |||| |||| ||||||||||||| Sbjct: 517 tcgacttgctggaccgggagtggaagaccaagccgtac 554
>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06 Length = 184289 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 422 ggcgaggtgcagttcctgctcagcgacctcaagccgtggtgggtggccaagttc 475 ||||||||||||||||| ||| | || ||||||||||||||||| ||||||| Sbjct: 52236 ggcgaggtgcagttcctcatcaccaacttcaagccgtggtgggtgcacaagttc 52289
>emb|AJ867400.1| Sorghum bicolor mRNA for glycosyltransferase (a3 gene) Length = 2019 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 418 caagggcgaggtgcagttcctgctcagcgacctcaagccgtggtgggtggccaagt 473 |||||||||||| | ||||||| ||||| || || ||||||||||| ||| ||||| Sbjct: 987 caagggcgaggtcctgttcctggtcagcaacatccagccgtggtggctgggcaagt 1042
>dbj|AK108605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G10, full insert sequence Length = 1615 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 gccgtcgtctccggcgccggcg 47 |||||||||||||||||||||| Sbjct: 351 gccgtcgtctccggcgccggcg 330
>ref|NM_185037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2175 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcgc 48 ||||||||||||||||||||| Sbjct: 1073 cgtcgtctccggcgccggcgc 1093
>ref|XM_468354.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1522 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccgtcgtctccggcgccggcg 47 ||||||||||||||||||||| Sbjct: 706 ccgtcgtctccggcgccggcg 726
>ref|XM_472638.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 ctgccgtcgtctccggcgccggcgc 48 |||||||||||||||| |||||||| Sbjct: 329 ctgccgtcgtctccggtgccggcgc 353
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcgc 48 ||||||||||||||||||||| Sbjct: 33057220 cgtcgtctccggcgccggcgc 33057240
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgtcgtctccggcgccggc 46 ||||||||||||||||||||| Sbjct: 117162 gccgtcgtctccggcgccggc 117142
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgtcgtctccggcgccggc 46 ||||||||||||||||||||| Sbjct: 92936 gccgtcgtctccggcgccggc 92956
>emb|AL731606.2|OSJN00249 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058G03, complete sequence Length = 46422 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 ctgccgtcgtctccggcgccggcgc 48 |||||||||||||||| |||||||| Sbjct: 39824 ctgccgtcgtctccggtgccggcgc 39800
>emb|AJ867393.1| Triticum aestivum mRNA for glycosyltransferase (a2a gene) Length = 2129 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 356 ggcaacctgtaccacgactacacggacgtgctggtgccgctcttc 400 |||||||| | |||||||| ||| |||||| | |||||||||||| Sbjct: 1040 ggcaacctcttccacgacttcaccgacgtgatcgtgccgctcttc 1084
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 ctgccgtcgtctccggcgccggcgc 48 |||||||||||||||| |||||||| Sbjct: 22141343 ctgccgtcgtctccggtgccggcgc 22141319 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcgc 48 ||||||||||||||||||||| Sbjct: 16747251 cgtcgtctccggcgccggcgc 16747271 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 ccgccgacgccccgccgccg 298 |||||||||||||||||||| Sbjct: 23832099 ccgccgacgccccgccgccg 23832080
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgtcgtctccggcgccggc 46 ||||||||||||||||||||| Sbjct: 24316053 gccgtcgtctccggcgccggc 24316033 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 24586010 cgtcgtctccggcgccggcg 24586029
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcgc 48 ||||||||||||||||||||| Sbjct: 33147730 cgtcgtctccggcgccggcgc 33147750
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 28 cgtcgtctccggcgccggcgc 48 ||||||||||||||||||||| Sbjct: 66088 cgtcgtctccggcgccggcgc 66068
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccgtcgtctccggcgccggcg 47 ||||||||||||||||||||| Sbjct: 132160 ccgtcgtctccggcgccggcg 132180
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 gccgtcgtctccggcgccggc 46 ||||||||||||||||||||| Sbjct: 1444608 gccgtcgtctccggcgccggc 1444628
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccgtcgtctccggcgccggcg 47 ||||||||||||||||||||| Sbjct: 35907 ccgtcgtctccggcgccggcg 35927
>dbj|AK106918.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B02, full insert sequence Length = 1522 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ccgtcgtctccggcgccggcg 47 ||||||||||||||||||||| Sbjct: 706 ccgtcgtctccggcgccggcg 726
>dbj|AK068267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149D11, full insert sequence Length = 1363 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcgc 48 ||||||||||||||||||||| Sbjct: 357 cgtcgtctccggcgccggcgc 377
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 gggcgaggtgcagttcctgct 441 ||||||||||||||||||||| Sbjct: 3821532 gggcgaggtgcagttcctgct 3821552
>dbj|AK064790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C06, full insert sequence Length = 2309 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcgc 48 ||||||||||||||||||||| Sbjct: 1083 cgtcgtctccggcgccggcgc 1103
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 ctgccgtcgtctccggcgccggcgc 48 |||||||||||||||| |||||||| Sbjct: 65849 ctgccgtcgtctccggtgccggcgc 65825
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gccgtcgtctccggcgccggc 46 ||||||||||||||||||||| Sbjct: 24627722 gccgtcgtctccggcgccggc 24627702 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 24897680 cgtcgtctccggcgccggcg 24897699
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 ctgccgtcgtctccggcgccggcgc 48 |||||||||||||||| |||||||| Sbjct: 11204 ctgccgtcgtctccggtgccggcgc 11180
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccccgccgccggcgtgcacc 307 |||||||||||||||||||| Sbjct: 628862 ccccgccgccggcgtgcacc 628843
>ref|XM_467967.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1781 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gccgtcgtctccggcgccgg 45 |||||||||||||||||||| Sbjct: 905 gccgtcgtctccggcgccgg 886
>ref|XM_507474.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.23 mRNA Length = 1080 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 107 cgtcgtctccggcgccggcg 126
>ref|XM_506786.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.23 mRNA Length = 1080 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 107 cgtcgtctccggcgccggcg 126
>ref|XM_465181.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1079 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 104 cgtcgtctccggcgccggcg 123
>ref|XM_465180.1| Oryza sativa (japonica cultivar-group), mRNA Length = 726 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 105 cgtcgtctccggcgccggcg 124
>ref|XM_463688.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 897 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gccgtcgtctccggcgccgg 45 |||||||||||||||||||| Sbjct: 286 gccgtcgtctccggcgccgg 305
>ref|XM_472871.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 ccgccgacgccccgccgccg 298 |||||||||||||||||||| Sbjct: 151 ccgccgacgccccgccgccg 132
>ref|XM_359722.1| Magnaporthe grisea 70-15 hypothetical protein (MG05055.4) partial mRNA Length = 1878 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ggacagggaatggaggacca 209 |||||||||||||||||||| Sbjct: 1069 ggacagggaatggaggacca 1088
>ref|XM_419807.1| PREDICTED: Gallus gallus similar to glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 (LOC421781), mRNA Length = 1998 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 agcggtgcgaggcggcgggg 142 |||||||||||||||||||| Sbjct: 159 agcggtgcgaggcggcgggg 178
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 62912 cgtcgtctccggcgccggcg 62931
>ref|XM_546740.2| PREDICTED: Canis familiaris tumor protein (P73), mRNA Length = 3629 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 gcaacgcctccaccatctacatcg 182 |||||||||||||||||| ||||| Sbjct: 3035 gcaacgcctccaccatctccatcg 3058
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 ccgccgacgccccgccgccg 298 |||||||||||||||||||| Sbjct: 153011 ccgccgacgccccgccgccg 152992
>emb|AL583922.1|MLEPRTN6 Mycobacterium leprae strain TN complete genome; segment 6/10 Length = 318200 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ccgacgccccgccgccggcg 301 |||||||||||||||||||| Sbjct: 92554 ccgacgccccgccgccggcg 92535
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 cccgccgacgccccgccgccggcg 301 ||||||| |||||||||||||||| Sbjct: 26458406 cccgccgccgccccgccgccggcg 26458383 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ctgccgtcgtctccggcgccggcg 47 ||||||||||| |||||||||||| Sbjct: 2779721 ctgccgtcgtcgccggcgccggcg 2779698
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gccgtcgtctccggcgccgg 45 |||||||||||||||||||| Sbjct: 40657734 gccgtcgtctccggcgccgg 40657753
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gccgtcgtctccggcgccgg 45 |||||||||||||||||||| Sbjct: 99712 gccgtcgtctccggcgccgg 99731
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ttcgtactcaagcccttccc 279 |||||||||||||||||||| Sbjct: 1128056 ttcgtactcaagcccttccc 1128075
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gccgtcgtctccggcgccgg 45 |||||||||||||||||||| Sbjct: 96355 gccgtcgtctccggcgccgg 96374
>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026D20 Length = 130634 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 76528 cgtcgtctccggcgccggcg 76509
>dbj|AK104533.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D08, full insert sequence Length = 1080 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 107 cgtcgtctccggcgccggcg 126
>dbj|AK104098.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-D11, full insert sequence Length = 1079 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 104 cgtcgtctccggcgccggcg 123
>dbj|AK103250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123M10, full insert sequence Length = 1112 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gccgtcgtctccggcgccgg 45 |||||||||||||||||||| Sbjct: 238 gccgtcgtctccggcgccgg 219
>dbj|AK099278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125D09, full insert sequence Length = 1546 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ctgccgtcgtctccggcgccggcg 47 ||||||||||| |||||||||||| Sbjct: 100 ctgccgtcgtcgccggcgccggcg 77
>dbj|AK072086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116L20, full insert sequence Length = 1485 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ctgccgtcgtctccggcgccggcg 47 ||||||||||| |||||||||||| Sbjct: 109 ctgccgtcgtcgccggcgccggcg 86
>dbj|AK064819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E21, full insert sequence Length = 725 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 105 cgtcgtctccggcgccggcg 124
>dbj|AK064404.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-H07, full insert sequence Length = 1781 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gccgtcgtctccggcgccgg 45 |||||||||||||||||||| Sbjct: 905 gccgtcgtctccggcgccgg 886
>dbj|AK060903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E01, full insert sequence Length = 1080 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgtcgtctccggcgccggcg 47 |||||||||||||||||||| Sbjct: 107 cgtcgtctccggcgccggcg 126
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 cccgccgacgccccgccgccggcg 301 ||||||| |||||||||||||||| Sbjct: 26386575 cccgccgccgccccgccgccggcg 26386552 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ctgccgtcgtctccggcgccggcg 47 ||||||||||| |||||||||||| Sbjct: 2779665 ctgccgtcgtcgccggcgccggcg 2779642
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 cccgccgacgccccgccgcc 297 |||||||||||||||||||| Sbjct: 87627 cccgccgacgccccgccgcc 87608
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 cccgccgacgccccgccgccggcg 301 ||||||| |||||||||||||||| Sbjct: 83670 cccgccgccgccccgccgccggcg 83693
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 ctgccgtcgtctccggcgccggcg 47 ||||||||||| |||||||||||| Sbjct: 90726 ctgccgtcgtcgccggcgccggcg 90749
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ctgccgtcgtctccggcgccggcg 47 ||||||||||| |||||||||||| Sbjct: 148647 ctgccgtcgtcgccggcgccggcg 148624
>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482D04 Length = 144583 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gccgtcgtctccggcgccgg 45 |||||||||||||||||||| Sbjct: 137749 gccgtcgtctccggcgccgg 137768 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,421,571 Number of Sequences: 3902068 Number of extensions: 2421571 Number of successful extensions: 50238 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49155 Number of HSP's gapped (non-prelim): 1075 length of query: 489 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 467 effective length of database: 17,147,199,772 effective search space: 8007742293524 effective search space used: 8007742293524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)