Clone Information

BLAST Search Result

Clone Name	baet116a01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UBP3_ARATH (O24454) Ubiquitin carboxyl-terminal hydrolase 3 (EC ...	75	5e-16
2	UBP4_ARATH (Q8LAM0) Ubiquitin carboxyl-terminal hydrolase 4 (EC ...	75	5e-16
3	UBP12_HUMAN (O75317) Ubiquitin carboxyl-terminal hydrolase 12 (E...	53	2e-09
4	UBP46_MOUSE (P62069) Ubiquitin carboxyl-terminal hydrolase 46 (E...	51	7e-09
5	UBP46_HUMAN (P62068) Ubiquitin carboxyl-terminal hydrolase 46 (E...	51	7e-09
6	UBPX_CAEEL (P34547) Probable ubiquitin carboxyl-terminal hydrola...	38	2e-04
7	UBP13_YEAST (P38187) Ubiquitin carboxyl-terminal hydrolase 13 (E...	36	0.060
8	UBP9_YEAST (P39967) Ubiquitin carboxyl-terminal hydrolase 9 (EC ...	34	0.23
9	SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protei...	33	0.39
10	IF2_SYNEL (Q8DK04) Translation initiation factor IF-2	33	0.39
11	EBNA4_EBV (P03203) Epstein-Barr nuclear antigen 4 (EBV nuclear a...	33	0.51
12	VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-)...	32	0.66
13	HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)	32	0.66
14	WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protei...	32	1.1
15	CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9	31	1.9
16	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	31	1.9
17	FBRL_SCHPO (P35551) Fibrillarin	31	1.9
18	WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protei...	31	1.9
19	UBP9_SCHPO (Q9P7V9) Probable ubiquitin carboxyl-terminal hydrola...	31	1.9
20	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	30	2.5
21	FBRL_YEAST (P15646) Fibrillarin (Nucleolar protein 1)	30	3.3
22	UBP13_HUMAN (Q92995) Ubiquitin carboxyl-terminal hydrolase 13 (E...	30	3.3
23	FETUA_CAVPO (O70159) Alpha-2-HS-glycoprotein precursor (Fetuin-A)	30	3.3
24	CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog	30	3.3
25	FBRL_ASHGO (Q756P0) Fibrillarin	30	3.3
26	UBP1_HUMAN (O94782) Ubiquitin carboxyl-terminal hydrolase 1 (EC ...	24	4.2
27	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	30	4.3
28	AGO1_ARATH (O04379) Argonaute protein	30	4.3
29	YMH7_CAEEL (P34474) Hypothetical protein F58A4.7 in chromosome III	30	4.3
30	ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrop...	30	4.3
31	CPXM2_HUMAN (Q8N436) Carboxypeptidase-like protein X2 precursor	30	4.3
32	ALR_RAT (Q63042) Augmenter of liver regeneration	30	4.3
33	PROP_PONPY (Q5RBP8) Properdin precursor (Factor P)	29	5.6
34	PROP_HUMAN (P27918) Properdin precursor (Factor P)	29	5.6
35	HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated...	29	5.6
36	EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)	29	5.6
37	CDC25_CANAL (P43069) Cell division control protein 25	29	5.6
38	TULP1_HUMAN (O00294) Tubby-related protein 1 (Tubby-like protein 1)	29	5.6
39	HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated c...	29	5.6
40	WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interactin...	29	7.3
41	NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)	29	7.3
42	EXTN_DAUCA (P06599) Extensin precursor	29	7.3
43	CN004_HUMAN (Q9H1B7) Protein C14orf4	29	7.3
44	TPS1_MOUSE (O70281) Protein-tyrosine sulfotransferase 1 (EC 2.8....	29	7.3
45	TPS1_HUMAN (O60507) Protein-tyrosine sulfotransferase 1 (EC 2.8....	29	7.3
46	ALR_HUMAN (P55789) Augmenter of liver regeneration (hERV1 protein)	29	7.3
47	AB1IP_XENLA (Q6DCV1) Amyloid beta A4 precursor protein-binding f...	29	7.3
48	ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)	28	9.6
49	Y101_NPVAC (P25695) Hypothetical 41.5 kDa protein in P6.9-VP48 i...	28	9.6
50	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	28	9.6
51	Y369_TREPA (O83384) Hypothetical protein TP0369 precursor	28	9.6
52	WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family mem...	28	9.6
53	NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 pr...	28	9.6
54	CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell ...	28	9.6
55	3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)	28	9.6
56	RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology doma...	28	9.6
57	KCNK4_HUMAN (Q9NYG8) Potassium channel subfamily K member 4 (TWI...	28	9.6
58	SMN_HUMAN (Q16637) Survival motor neuron protein (Component of g...	28	9.6
59	PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B me...	28	9.6
60	CN108_HUMAN (Q9H0R1) Protein C14orf108 (Putative HIV-1 infection...	28	9.6

>UBP3_ARATH (O24454) Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 3)
           (Ubiquitin-specific-processing protease 3)
           (Deubiquitinating enzyme 3) (AtUBP3)
          Length = 371

 Score = 74.7 bits (182), Expect(2) = 5e-16
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +2

Query: 341 MGASGSKLEKALGDQFPEGERYFGLENFGNTCYC 442
           MGA+GSKLEKALGDQFPEGERYFG ENFGNTCYC
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYC 34



 Score = 28.1 bits (61), Expect(2) = 5e-16
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 442 HSVLQALYFCTPF 480
           +SVLQALYFC PF
Sbjct: 35  NSVLQALYFCVPF 47

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>UBP4_ARATH (Q8LAM0) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 4)
           (Ubiquitin-specific-processing protease 4)
           (Deubiquitinating enzyme 4) (AtUBP4)
          Length = 365

 Score = 74.7 bits (182), Expect(2) = 5e-16
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +2

Query: 341 MGASGSKLEKALGDQFPEGERYFGLENFGNTCYC 442
           MGA+GSKLEKALGDQFPEGERYFG ENFGNTCYC
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYC 34



 Score = 28.1 bits (61), Expect(2) = 5e-16
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 442 HSVLQALYFCTPF 480
           +SVLQALYFC PF
Sbjct: 35  NSVLQALYFCAPF 47

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>UBP12_HUMAN (O75317) Ubiquitin carboxyl-terminal hydrolase 12 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 12)
           (Ubiquitin-specific-processing protease 12)
           (Deubiquitinating enzyme 12) (Ubiquitin hydrolyzing
           enzyme 1)
          Length = 355

 Score = 53.1 bits (126), Expect(2) = 2e-09
 Identities = 24/35 (68%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
 Frame = +2

Query: 341 MGASGSKLEKALG-DQFPEGERYFGLENFGNTCYC 442
           MGA+ S LEK +G +QFP  E YFGL NFGNTCYC
Sbjct: 1   MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYC 35



 Score = 27.7 bits (60), Expect(2) = 2e-09
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 442 HSVLQALYFCTPF 480
           +SVLQALYFC PF
Sbjct: 36  NSVLQALYFCRPF 48

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>UBP46_MOUSE (P62069) Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 46)
           (Ubiquitin-specific-processing protease 46)
           (Deubiquitinating enzyme 46)
          Length = 366

 Score = 50.8 bits (120), Expect(2) = 7e-09
 Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = +2

Query: 341 MGASGSKLEKALG-DQFPEGERYFGLENFGNTCYC 442
           MG + S LEK +G +QFP  E YFGL NFGNTCYC
Sbjct: 12  MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYC 46



 Score = 27.7 bits (60), Expect(2) = 7e-09
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 442 HSVLQALYFCTPF 480
           +SVLQALYFC PF
Sbjct: 47  NSVLQALYFCRPF 59

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>UBP46_HUMAN (P62068) Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 46)
           (Ubiquitin-specific-processing protease 46)
           (Deubiquitinating enzyme 46)
          Length = 366

 Score = 50.8 bits (120), Expect(2) = 7e-09
 Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = +2

Query: 341 MGASGSKLEKALG-DQFPEGERYFGLENFGNTCYC 442
           MG + S LEK +G +QFP  E YFGL NFGNTCYC
Sbjct: 12  MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYC 46



 Score = 27.7 bits (60), Expect(2) = 7e-09
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 442 HSVLQALYFCTPF 480
           +SVLQALYFC PF
Sbjct: 47  NSVLQALYFCRPF 59

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>UBPX_CAEEL (P34547) Probable ubiquitin carboxyl-terminal hydrolase R10E11.3|
           (EC 3.1.2.15) (Ubiquitin thioesterase)
           (Ubiquitin-specific processing protease)
           (Deubiquitinating enzyme)
          Length = 410

 Score = 37.7 bits (86), Expect(2) = 2e-04
 Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
 Frame = +2

Query: 341 MGASGS-KLEKALGDQFP---EGERYFGLENFGNTCYC 442
           MGA+GS +LEK +          E Y+GL NFGNTCYC
Sbjct: 1   MGATGSSQLEKEISTTESVNNANEHYYGLVNFGNTCYC 38



 Score = 25.4 bits (54), Expect(2) = 2e-04
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +1

Query: 442 HSVLQALYFCTPF 480
           +SV+QAL+FC PF
Sbjct: 39  NSVIQALFFCRPF 51

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>UBP13_YEAST (P38187) Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 13)
           (Ubiquitin-specific-processing protease 13)
           (Deubiquitinating enzyme 13)
          Length = 688

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +2

Query: 287 GFRYLTGA-ATGWWDRWMVMGASGSKLEKALGDQFPEGE---RYFGLENFGNTCYC 442
           G  Y++ A A   +   +  G     L   + D  P G+   + FG ENFGNTCYC
Sbjct: 96  GIFYISNAKAINAYGGIITQGPEAPILAMKVSDSMPYGDGSNKVFGYENFGNTCYC 151

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>UBP9_YEAST (P39967) Ubiquitin carboxyl-terminal hydrolase 9 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 9)
           (Ubiquitin-specific-processing protease 9)
           (Deubiquitinating enzyme 9)
          Length = 754

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 308 AATGWWDRWMVMGASGSKLEKALGDQFPEGE---RYFGLENFGNTCYC 442
           ++T + DR        S L   + D  P G+   + FG ENFGNTCYC
Sbjct: 100 SSTTYEDR--AFDTESSILFTTITDLMPYGDGSNKVFGYENFGNTCYC 145

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>SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protein 1 precursor|
           (Salivary protein MSG1)
          Length = 147

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 53  PKISSHTPPPPCPGAKRHRRRLTHPTPSPPT 145
           P I    PPPPCP    H R  ++P+P PPT
Sbjct: 68  PGIGRPPPPPPCPPVPPHPRPPSNPSP-PPT 97

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>IF2_SYNEL (Q8DK04) Translation initiation factor IF-2|
          Length = 957

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTR 148
           P+ PKP+LQ    +  P  +   P PP P A +    +    P+PP +
Sbjct: 96  PEAPKPQLQKPPARPQPPQAPTRPTPPAPVAPKPVEPVAAKPPAPPAK 143

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>EBNA4_EBV (P03203) Epstein-Barr nuclear antigen 4 (EBV nuclear antigen 4)|
           (EBNA-4) (EBNA-3B)
          Length = 938

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 20  PKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRV 151
           P++  +  QR     + TPPP  P   R R R   PTP+PP +V
Sbjct: 707 PEVPPVPRQRPRGAPTPTPPPQVPPVPRQRPR-GAPTPTPPPQV 749

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>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen|
           Mab46F11)
          Length = 661

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 19/48 (39%), Positives = 21/48 (43%)
 Frame = -3

Query: 259 GRRGGQGGSQEPMSDMQAGVESAVTRRGRNEGGDEENARGGRRSWVGE 116
           G RGGQGGS+      + G      R   NE GDE   R  R    GE
Sbjct: 106 GSRGGQGGSRGGQGGFRGGEGGFRGRLYENEDGDERRGRLDREERGGE 153

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>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)|
          Length = 3866

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = +2

Query: 14   PKPKLQSIQTQRAPKI-----SSHTPPPPCPGAKRHRRRLTHPTPSPPTR 148
            P+P   + Q + APK          PPPP PG ++ +++   P PS P +
Sbjct: 1206 PQPPSTAPQKKEAPKAVPSEPKKKQPPPPEPGPEQSKQKKVAPLPSIPVK 1255

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>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/45 (44%), Positives = 21/45 (46%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSP 139
           PDL +P   S       K SS  PPPP PG    RR    PTP P
Sbjct: 157 PDLSRPNTTS---STGMKHSSSAPPPPPPG----RRANAPPTPLP 194



 Score = 29.6 bits (65), Expect = 4.3
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSP 139
           P  P P    + + +AP  +   P PP PG + H  R   P P P
Sbjct: 189 PPTPLP----MHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPPP 229

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>CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9|
          Length = 531

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
 Frame = -3

Query: 226 PMSDMQAGVESAVTRRGRNEGGDE--------ENARGGRRSWVGEAPAVTLSSRARRR 77
           P+ + +        R GRN GG +        E+ R GRR+ +G A  +TLS   R R
Sbjct: 204 PLEESERDRREESRRHGRNWGGPDFERVRCGLEHERQGRRAGLGSAGDMTLSMTGRER 261

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>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
            chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 14   PKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPP 142
            P P L S++ Q  P      PPPP P  ++ + +   P P PP
Sbjct: 943  PTPLLPSVKVQSQP--PPPLPPPPHPSVQQQQLQPQPPPPPPP 983



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 5    PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSP 139
            P LP P   S+Q Q   ++    PPPP P  +   ++   P P P
Sbjct: 958  PPLPPPPHPSVQQQ---QLQPQPPPPPPPQPQPPPQQQHQPPPRP 999

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>FBRL_SCHPO (P35551) Fibrillarin|
          Length = 305

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = -3

Query: 259 GRRGGQGGSQEPMSDMQAGVESAVTRRGRNEGGDEENARGGR 134
           G RGG+GGS+        G       RG   GG    ARGGR
Sbjct: 6   GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGR 47

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>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSP 139
           P  P P    + + +A   +   P PP PG + H  R  HP P P
Sbjct: 189 PPTPLP----LHSNKAQAYNREKPLPPTPGQRLHPGREGHPAPPP 229



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 20/45 (44%), Positives = 21/45 (46%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSP 139
           PDL +P   S       K SS  PPPP PG    RR    PTP P
Sbjct: 157 PDLSRPNTAS---GTGMKHSSSAPPPPPPG----RRANAPPTPLP 194

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>UBP9_SCHPO (Q9P7V9) Probable ubiquitin carboxyl-terminal hydrolase 9 (EC|
           3.1.2.15) (Ubiquitin thioesterase 9) (Ubiquitin-specific
           processing protease 9) (Deubiquitinating enzyme 9)
          Length = 585

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 10/47 (21%)
 Frame = +2

Query: 329 RWMVMGASGS--KLEKALGDQFPEG--------ERYFGLENFGNTCY 439
           RWM M + GS  + +     + P+         +R++GL N+GNTCY
Sbjct: 5   RWMGMNSPGSTDRRKSTWEAELPKPSIRPETLTDRFYGLTNYGNTCY 51

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +2

Query: 20  PKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHP----TPSPPTR 148
           P     + +R+P  +   PPPP P   R RR  T P    TPSPP R
Sbjct: 562 PSPPPARRRRSPSPAPPPPPPPPP--PRRRRSPTPPPRRRTPSPPPR 606

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>FBRL_YEAST (P15646) Fibrillarin (Nucleolar protein 1)|
          Length = 327

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/49 (34%), Positives = 20/49 (40%)
 Frame = -3

Query: 259 GRRGGQGGSQEPMSDMQAGVESAVTRRGRNEGGDEENARGGRRSWVGEA 113
           G RGG GG        + G       RG + GG    +RGGR    G A
Sbjct: 32  GSRGGFGGRGGSRGGARGGSRGGFGGRGGSRGGARGGSRGGRGGAAGGA 80



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 20/66 (30%), Positives = 23/66 (34%)
 Frame = -3

Query: 259 GRRGGQGGSQEPMSDMQAGVESAVTRRGRNEGGDEENARGGRRSWVGEAPAVTLSSRARR 80
           G RGG GG        + G       RG + GG    +RGG     G        SR  R
Sbjct: 14  GSRGGFGGRGGSRGGARGGSRGGFGGRGGSRGGARGGSRGGFGGRGGSRGGARGGSRGGR 73

Query: 79  RWRMGG 62
               GG
Sbjct: 74  GGAAGG 79

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>UBP13_HUMAN (Q92995) Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 13)
           (Ubiquitin-specific-processing protease 13)
           (Deubiquitinating enzyme 13) (Isopeptidase T-3) (ISOT-3)
          Length = 863

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 332 WMVMGASGSKLEKALGDQFPEGERYFGLENFGNTCY 439
           W V+  SG+KL+   G        Y GL+N GN+CY
Sbjct: 317 WEVIQESGTKLKPMYGPG------YTGLKNLGNSCY 346

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>FETUA_CAVPO (O70159) Alpha-2-HS-glycoprotein precursor (Fetuin-A)|
          Length = 358

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 8/43 (18%)
 Frame = +2

Query: 2   YPDLPKPKLQSIQTQRAPKIS--------SHTPPPPCPGAKRH 106
           +PD+     ++   ++ PK++           PPPPCPG  RH
Sbjct: 313 FPDVDSASGEAFGPRQKPKVTHPGVASGVGPVPPPPCPGRIRH 355

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>CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog|
          Length = 775

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +2

Query: 50  APKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVFFIAALVS 175
           AP  S+  PPPP P    H  R T P  +P      +AAL+S
Sbjct: 567 APGHSAGGPPPPPPPLGPHSNRTTPPESAPQNGPSPMAALMS 608

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>FBRL_ASHGO (Q756P0) Fibrillarin|
          Length = 326

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -3

Query: 259 GRRGGQGGSQEPMSDMQAGVESAVTRRGRNEGGDEENARGGRRSWVGEA 113
           G RGG+GG      D + G       RG + GG     RGG R   G A
Sbjct: 34  GSRGGRGGF-----DSRGGARGGFGGRGGSRGGPRGGPRGGARGGRGGA 77

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>UBP1_HUMAN (O94782) Ubiquitin carboxyl-terminal hydrolase 1 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 1) (Ubiquitin-specific
           processing protease 1) (Deubiquitinating enzyme 1)
           (hUBP)
          Length = 785

 Score = 24.3 bits (51), Expect(2) = 4.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 404 YFGLENFGNTCY 439
           + GL N GNTCY
Sbjct: 80  FVGLNNLGNTCY 91



 Score = 23.9 bits (50), Expect(2) = 4.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 439 LHSVLQALYFCTPF 480
           L+S+LQ LYFC  F
Sbjct: 92  LNSILQVLYFCPGF 105

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
 Frame = +2

Query: 14  PKPKLQSIQTQRAPKISSHTPPP---PCPGAKRHRRRLT--HPTPSPPTR 148
           P PK ++  + ++ +  SH+PPP     P AKR    ++  H   SPP+R
Sbjct: 612 PPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSR 661

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>AGO1_ARATH (O04379) Argonaute protein|
          Length = 1048

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = -3

Query: 259 GRRGGQGGSQEPMSDMQAGVESAVTRRGRNEGGDEENARGGRRSWVGEAPA 107
           G RGG+G  Q P    Q G       RGR  G   +  RGG     G  P+
Sbjct: 57  GGRGGRGYGQPPQQQQQYGGPQEYQGRGRG-GPPHQGGRGGYGGGRGGGPS 106

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>YMH7_CAEEL (P34474) Hypothetical protein F58A4.7 in chromosome III|
          Length = 431

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/72 (27%), Positives = 26/72 (36%)
 Frame = +2

Query: 74  PPPPCPGAKRHRRRLTHPTPSPPTRVFFIAALVSTPSXXXXXXXXXXXXXXXXXSALASP 253
           PPP  P  +     +  PTP PP  V   +  +STPS                 S L   
Sbjct: 302 PPPTLPSLET---TVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQT 358

Query: 254 AAERSRSGLGSG 289
           AA    S + +G
Sbjct: 359 AAAAVTSAMSTG 370

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>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 11/59 (18%)
 Frame = +2

Query: 2   YP-DLPKPKLQSIQTQ----RAPKISSHT------PPPPCPGAKRHRRRLTHPTPSPPT 145
           YP   P P   S+  Q      P + S        PPPP P  +      THP P PPT
Sbjct: 406 YPHSFPPPTSMSVSNQPPKYTQPSLPSQAVWSQGPPPPPPPYGRLLPNNNTHPGPFPPT 464

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>CPXM2_HUMAN (Q8N436) Carboxypeptidase-like protein X2 precursor|
          Length = 756

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRR 112
           P  P+P  ++ + ++APK     P PP PG   +++
Sbjct: 73  PQEPRPPKRATKPKKAPKREKSAPEPPPPGKHSNKK 108

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>ALR_RAT (Q63042) Augmenter of liver regeneration|
          Length = 125

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +2

Query: 2   YPDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVFF 157
           YPD+P P+ Q    Q     S   P   C  A+  R+R+    P   TRV F
Sbjct: 37  YPDMPTPEQQQDMAQFIHIFSKFYPCEEC--AEDIRKRIDRSQPDTSTRVSF 86

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>PROP_PONPY (Q5RBP8) Properdin precursor (Factor P)|
          Length = 469

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 17  KPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSP 139
           +PK    +   AP+ S   P  PCPG    +RR T   P P
Sbjct: 215 EPKETRSRKCSAPEPSQKPPGKPCPGLAYEQRRCTGLPPCP 255

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>PROP_HUMAN (P27918) Properdin precursor (Factor P)|
          Length = 469

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 17  KPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSP 139
           +PK    +   AP+ S   P  PCPG    +RR T   P P
Sbjct: 215 EPKETRSRKCSAPEPSQKPPGKPCPGLAYEQRRCTGLPPCP 255

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>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Brain cyclic nucleotide gated
            channel 3) (BCNG-3)
          Length = 1186

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 47   RAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPT 145
            R+P+ +   PPPP PGA+     L H  P PP+
Sbjct: 920  RSPQAAQ--PPPPLPGARGGLGLLEHFLPPPPS 950

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>EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)|
          Length = 267

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/47 (31%), Positives = 18/47 (38%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPT 145
           P  PKP   +      P     TPP   P  K    +   P P+PPT
Sbjct: 189 PPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPT 235



 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/47 (31%), Positives = 18/47 (38%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPT 145
           P  PKP   +      P     TPP   P  K    +   P P+PPT
Sbjct: 85  PPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPT 131



 Score = 29.3 bits (64), Expect = 5.6
 Identities = 15/47 (31%), Positives = 18/47 (38%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPT 145
           P  PKP   +      P     TPP   P  K    +   P P+PPT
Sbjct: 48  PPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPT 94



 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/59 (30%), Positives = 21/59 (35%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVFFIAALVSTP 181
           P  PKP   +      P     TPP   P  K      THPTP P    +  +    TP
Sbjct: 138 PPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPP----THPTPKPTPPTYTPSPKPPTP 192

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>CDC25_CANAL (P43069) Cell division control protein 25|
          Length = 1333

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 278 LGSGFRYLTGAATGWWDRWMVMGASG 355
           LG     L+ +ATGWWD  +VMG SG
Sbjct: 53  LGDTIHVLSKSATGWWD-GVVMGNSG 77

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>TULP1_HUMAN (O00294) Tubby-related protein 1 (Tubby-like protein 1)|
          Length = 542

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 9/54 (16%)
 Frame = +2

Query: 5   PDLPK-PKLQSIQTQRAPKISSHTPPPPC--------PGAKRHRRRLTHPTPSP 139
           P+ P+ PK +    QR  K  +  P  PC        PGA R  R    P+P P
Sbjct: 25  PEAPRRPKQRPAPAQRLRKKRTEAPESPCPTGSKPRKPGAGRRGRPREEPSPDP 78

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>HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1198

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 47   RAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPT 145
            R+P+ +   PPPP PGA+     L H  P PP+
Sbjct: 933  RSPQAAQ--PPPPLPGARGGLGLLEHFLPPPPS 963

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>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = +2

Query: 5   PDLPKPKLQSIQTQRAPK----ISSHTPPPPCPGAKRHRRRLTHPTPSPPT 145
           P LP     + +T R P+    +SS TPP P PG        + P P PP+
Sbjct: 319 PPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGR-------SGPLPPPPS 362

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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = +2

Query: 50  APKISSHTPPPPCPGAKRHRRRLTHP----TPSPPT 145
           AP +SS  PPPP P   R    + HP     PSPP+
Sbjct: 130 APVLSS-PPPPPSPPTPRSSTPIPHPPRRSLPSPPS 164

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>EXTN_DAUCA (P06599) Extensin precursor|
          Length = 306

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 47  RAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVF 154
           ++P    H+PPPP P  K         +P PPT V+
Sbjct: 234 KSPPPPEHSPPPPTPVYKYKSPPPPMHSPPPPTPVY 269

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>CN004_HUMAN (Q9H1B7) Protein C14orf4|
          Length = 796

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 50  APKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVFFIAALVS 175
           AP  ++  PPPP P    H  R T P  +P      +AAL+S
Sbjct: 588 APGHAAGGPPPPPPPLGPHSNRTTPPESAPQNGPSPMAALMS 629

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>TPS1_MOUSE (O70281) Protein-tyrosine sulfotransferase 1 (EC 2.8.2.20)|
           (Tyrosylprotein sulfotransferase-1) (TPST-1)
          Length = 370

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -1

Query: 390 GNWSPRAFSSLEPLAPMTIHRSHHPVAAPVRYRKPDP 280
           G   P     +  +APM     + P A P  Y KPDP
Sbjct: 304 GKIPPDVLQDMAVIAPMLAKLGYDPYANPPNYGKPDP 340

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>TPS1_HUMAN (O60507) Protein-tyrosine sulfotransferase 1 (EC 2.8.2.20)|
           (Tyrosylprotein sulfotransferase-1) (TPST-1)
          Length = 370

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -1

Query: 390 GNWSPRAFSSLEPLAPMTIHRSHHPVAAPVRYRKPDP 280
           G   P     +  +APM     + P A P  Y KPDP
Sbjct: 304 GKIPPDVLQDMAVIAPMLAKLGYDPYANPPNYGKPDP 340

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>ALR_HUMAN (P55789) Augmenter of liver regeneration (hERV1 protein)|
          Length = 125

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 19/52 (36%), Positives = 22/52 (42%)
 Frame = +2

Query: 2   YPDLPKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVFF 157
           YPDLP P+ Q    Q     S   P   C  A+  R+RL    P   TR  F
Sbjct: 37  YPDLPTPEQQQDMAQFIHLFSKFYPCEEC--AEDLRKRLCRNHPDTRTRACF 86

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>AB1IP_XENLA (Q6DCV1) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
          Length = 653

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = +2

Query: 14  PKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVFFIAALVST 178
           P P +  +Q   AP      PPPP P A      +    P PP R   +  +  T
Sbjct: 572 PPPPVTQLQMSNAPA-PPPPPPPPAPAANVPPLPVKKHPPKPPKRQSIVGPMPGT 625

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>ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)|
          Length = 572

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +2

Query: 14  PKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVF 154
           PKPK+        P     + PPP PGA+R +       P PP   F
Sbjct: 32  PKPKVN-------PFRPGDSEPPPAPGAQRAQMGRVGEIPPPPPEDF 71

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>Y101_NPVAC (P25695) Hypothetical 41.5 kDa protein in P6.9-VP48 intergenic|
           region (P40)
          Length = 361

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 23  KLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVFFIAA 166
           K+Q +Q Q+   I+S T  P C  A+   R L H  P P +R+++ AA
Sbjct: 253 KIQMLQPQQY--INSGTEIPFCDDAEFLNRLLKHIDPYPLSRMYYNAA 298

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>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 14   PKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSP 139
            P P L S++ Q  P      PPPP P  ++  ++   P P P
Sbjct: 941  PTPLLPSVKVQSQP--PPPLPPPPHPSVQQQLQQQPPPPPPP 980

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>Y369_TREPA (O83384) Hypothetical protein TP0369 precursor|
          Length = 516

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 50  APKISSHTPPPPCPGAKRHRRRLTHPTPSP 139
           AP+    +PPP  P A + ++R   P+P P
Sbjct: 132 APRPHRPSPPPVSPSASKPKQRAVPPSPPP 161

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>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
           (Verprolin homology domain-containing protein 1)
          Length = 559

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/51 (37%), Positives = 22/51 (43%)
 Frame = +2

Query: 29  QSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVFFIAALVSTP 181
           QS  T R P   S TPPPP P           P PS  +     A++ STP
Sbjct: 309 QSPATGRTPVFVSPTPPPPPP-----------PLPSALSTSSLRASMTSTP 348

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>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch|
           3) [Contains: Notch 3 extracellular truncation; Notch 3
           intracellular domain]
          Length = 2321

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 80  PPCPGAKRHRRRLTHPTPSPPTRVFFIAALVSTP 181
           P   G +R RR ++ P P PP R   +  L++ P
Sbjct: 3   PGARGRRRRRRPMSPPPPPPPVRALPLLLLLAGP 36

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>CD2_HUMAN (P06729) T-cell surface antigen CD2 precursor (T-cell surface|
           antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (Erythrocyte
           receptor) (Rosette receptor)
          Length = 351

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +2

Query: 17  KPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPP 142
           KP+     T + P  S H PPPP      HR +     P PP
Sbjct: 264 KPQQIPASTPQNPATSQHPPPPP-----GHRSQAPSHRPPPP 300

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>3BP1_HUMAN (Q9Y3L3) SH3 domain-binding protein 1 (3BP-1)|
          Length = 701

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
 Frame = +2

Query: 47  RAPKISSHTPP-PPCPGAKRHRRRLTHPTPSPPTRVFFIAALVSTPSXXXXXXXXXXXXX 223
           RAP +    PP PP P  ++ RR    P+P+ P         +S P+             
Sbjct: 615 RAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQVDLGAATAEGGA 674

Query: 224 XXXXSALASPAA 259
               S + +P A
Sbjct: 675 PEAISGVPTPPA 686

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>RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology domains-containing|
           protein 1 (RAPH1) (Lamellipodin) (Proline-rich EVH1
           ligand 2) (PREL-2) (Protein RMO1) (Amyotrophic lateral
           sclerosis 2 chromosomal region candidate 9 gene protein)
          Length = 1302

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +2

Query: 14  PKPKLQSIQTQRAPKISSHTPPPPCPGAKRHRRRLTHPTP--SPPTRVFFIAALVST 178
           P P L+  Q Q   +++  TPPPP P        +  P P  +PP  +  I A  ST
Sbjct: 795 PPPPLKIHQVQHITQVAPPTPPPPPP--------IPAPLPPQAPPKPLVTIPAPTST 843

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>KCNK4_HUMAN (Q9NYG8) Potassium channel subfamily K member 4 (TWIK-related|
           arachidonic acid-stimulated potassium channel protein)
           (TRAAK) (Two pore K(+) channel KT4.1)
          Length = 393

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
 Frame = +2

Query: 74  PPPPCPGAKRHRRRLTHP-----TPSPPT 145
           PPPPCP     R R   P      PSPPT
Sbjct: 305 PPPPCPAQPLGRPRSPSPPEKAQPPSPPT 333

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>SMN_HUMAN (Q16637) Survival motor neuron protein (Component of gems 1)|
           (Gemin-1)
          Length = 294

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +2

Query: 14  PKPKLQSIQTQRAPKISSHTPPPPCPGAK----RHRRRLTHPTPSPP 142
           P  K  +I+ + AP  S   PPPP PG +    +   +   P P PP
Sbjct: 176 PGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPP 222

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>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein|
           LL5-alpha)
          Length = 1371

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -3

Query: 229 EPMSDMQAGVESAVTRRGRNEGGDEENARGGRRSWVGEAPAVTLSSRARRRW---RMGG 62
           +P     +G  S+ + R   +GG E     G R  + ++PA T+ + ARR     R+GG
Sbjct: 297 QPPQSRPSGSRSSDSPRLGRKGGHERPPSPGLRGLLTDSPAATVLAEARRTTESPRLGG 355

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>CN108_HUMAN (Q9H0R1) Protein C14orf108 (Putative HIV-1 infection-related|
           protein)
          Length = 490

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +2

Query: 44  QRAPKISSHTPPPPCPGAKRHRRRLTHPTPSPPTRVFFIAALVSTP 181
           QRA  + SH P  P  G  R  RR  +PT     RVF  A+ V  P
Sbjct: 3   QRAVWLISHEPGTPLCGTVRFSRR--YPTVEKRARVFNGASYVPVP 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,911,600
Number of Sequences: 219361
Number of extensions: 1072358
Number of successful extensions: 6198
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 5108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6080
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result