Clone Information

BLAST Search Result

Clone Name	baet115h10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2...	96	3e-20
2	ARR18_ARATH (Q9FGT7) Two-component response regulator ARR18	77	1e-14
3	ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Recei...	72	3e-13
4	ARR12_ARATH (P62598) Two-component response regulator ARR12	71	6e-13
5	ARR14_ARATH (Q8L9Y3) Two-component response regulator ARR14	71	6e-13
6	ARR1_ARATH (Q940D0) Two-component response regulator ARR1	71	7e-13
7	ARR21_ARATH (Q9LYP5) Putative two-component response regulator A...	67	8e-12
8	ARR10_ARATH (O49397) Two-component response regulator ARR10 (Rec...	67	1e-11
9	ARR20_ARATH (Q9LZJ8) Putative two-component response regulator A...	63	2e-10
10	ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Rec...	62	5e-10
11	ARR13_ARATH (Q9ZVD3) Putative two-component response regulator A...	60	1e-09
12	APRR4_ARATH (Q9FJ16) Putative two-component response regulator-l...	56	2e-08
13	MYBF_ARATH (Q700D9) Putative Myb family transcription factor At1...	53	2e-07
14	ARR19_ARATH (Q9M9B9) Putative two-component response regulator A...	52	4e-07
15	V70K_TYMVC (P28478) 69 kDa protein	31	0.65
16	V70K_TYMV (P10357) 69 kDa protein	31	0.65
17	V70K_TYMVA (P20131) 69 kDa protein	30	1.1
18	CCNB_DROME (P20439) G2/mitotic-specific cyclin-B	30	1.9
19	ADD_PHOLL (Q7N4H5) Adenosine deaminase (EC 3.5.4.4) (Adenosine a...	29	2.5
20	CU093_HUMAN (P59091) Protein C21orf93	29	2.5
21	KR10A_HUMAN (P60014) Keratin-associated protein 10-10 (Keratin-a...	29	3.2
22	GATM_MOUSE (Q9D964) Glycine amidinotransferase, mitochondrial pr...	29	3.2
23	GATM_PONPY (Q5RFB9) Glycine amidinotransferase, mitochondrial pr...	28	4.2
24	GATM_MACFA (Q4R806) Glycine amidinotransferase, mitochondrial pr...	28	4.2
25	GATM_HUMAN (P50440) Glycine amidinotransferase, mitochondrial pr...	28	4.2
26	VLTF_BPT5 (P13390) L-shaped tail fiber protein (Protein ltf)	28	5.5
27	PBPA_PSEAE (Q07806) Penicillin-binding protein 1A (PBP-1a) (PBP1...	28	7.2
28	ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII...	28	7.2
29	AADAT_HUMAN (Q8N5Z0) Kynurenine/alpha-aminoadipate aminotransfer...	28	7.2
30	PDR15_YEAST (Q04182) ATP-dependent permease PDR15	28	7.2
31	ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII...	28	7.2
32	POL_HTLV2 (P03363) Pol polyprotein [Contains: Reverse transcript...	28	7.2
33	GATM_RAT (P50442) Glycine amidinotransferase, mitochondrial prec...	28	7.2
34	UBP11_HUMAN (P51784) Ubiquitin carboxyl-terminal hydrolase 11 (E...	27	9.4
35	UBP11_CANFA (Q01988) Ubiquitin carboxyl-terminal hydrolase 11 (E...	27	9.4
36	RW1_MOUSE (O70472) RW1 protein	27	9.4
37	GATM_PIG (P50441) Glycine amidinotransferase (EC 2.1.4.1) (L-arg...	27	9.4
38	PRP33_DAUCA (P06600) Proline-rich 33 kDa extensin-related protei...	27	9.4
39	YEHP_ECOLI (P33352) Hypothetical protein yehP	27	9.4

>APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2|
           (Pseudo-response regulator 2) (TOC2 protein)
          Length = 535

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 44/68 (64%), Positives = 56/68 (82%)
 Frame = +3

Query: 96  KVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRKHLMA 275
           KVDWTPELH++FVQAVEQLG+D+A+PSRILELM     LTRHN+ASHLQK+R HRK+++ 
Sbjct: 298 KVDWTPELHKKFVQAVEQLGVDQAIPSRILELM-KVGTLTRHNVASHLQKFRQHRKNILP 356

Query: 276 REAEAASW 299
           ++     W
Sbjct: 357 KDDHNHRW 364

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>ARR18_ARATH (Q9FGT7) Two-component response regulator ARR18|
          Length = 635

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 38/62 (61%), Positives = 49/62 (79%)
 Frame = +3

Query: 84  RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 263
           R+K +V W+ ELH++FV AV+QLGLDKAVP +IL+LM  E  LTR N+ASHLQKYR + K
Sbjct: 192 RKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIE-GLTRENVASHLQKYRLYLK 250

Query: 264 HL 269
            +
Sbjct: 251 KI 252

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>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Receiver-like|
           protein 5)
          Length = 664

 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 37/75 (49%), Positives = 50/75 (66%)
 Frame = +3

Query: 87  RKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRKH 266
           +K +V W+ ELH++FV AV QLG+DKAVP +ILE+M N   LTR N+ASHLQKYR + + 
Sbjct: 215 KKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMM-NVPGLTRENVASHLQKYRIYLRR 273

Query: 267 LMAREAEAASWTHKW 311
           L        +  H +
Sbjct: 274 LGGVSQHQGNMNHSF 288

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>ARR12_ARATH (P62598) Two-component response regulator ARR12|
          Length = 596

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 34/62 (54%), Positives = 48/62 (77%)
 Frame = +3

Query: 84  RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 263
           ++K +V WT ELH++FV AV QLG +KA+P +IL+LM N  +LTR N+ASHLQK+R + K
Sbjct: 193 QKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLM-NVEKLTRENVASHLQKFRLYLK 251

Query: 264 HL 269
            +
Sbjct: 252 RI 253

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>ARR14_ARATH (Q8L9Y3) Two-component response regulator ARR14|
          Length = 382

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 36/68 (52%), Positives = 50/68 (73%)
 Frame = +3

Query: 87  RKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRKH 266
           +K +V W+ ELH++FV AV +LG+DKAVP RILELM N   L+R N+ASHLQK+R + K 
Sbjct: 199 KKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELM-NVPGLSRENVASHLQKFRLYLKR 257

Query: 267 LMAREAEA 290
           L    +++
Sbjct: 258 LSGEASQS 265

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>ARR1_ARATH (Q940D0) Two-component response regulator ARR1|
          Length = 690

 Score = 70.9 bits (172), Expect = 7e-13
 Identities = 36/61 (59%), Positives = 47/61 (77%)
 Frame = +3

Query: 87  RKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRKH 266
           +K +V W+ ELH++FV AV QLG++KAVP +ILELM N   LTR N+ASHLQKYR + + 
Sbjct: 236 KKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELM-NVPGLTRENVASHLQKYRIYLRR 294

Query: 267 L 269
           L
Sbjct: 295 L 295

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>ARR21_ARATH (Q9LYP5) Putative two-component response regulator ARR21|
          Length = 592

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 32/55 (58%), Positives = 39/55 (70%)
 Frame = +3

Query: 87  RKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYR 251
           +K K+ WT  LH  F+QA+  +GLDKAVP +IL  M   Y LTR N+ASHLQKYR
Sbjct: 221 KKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKILAFMSVPY-LTRENVASHLQKYR 274

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>ARR10_ARATH (O49397) Two-component response regulator ARR10 (Receiver-like|
           protein 4)
          Length = 552

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
 Frame = +3

Query: 84  RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 263
           ++K +V WT ELH +F+ AV+ LG+++AVP +IL+LM N  +LTR N+ASHLQK+R   K
Sbjct: 181 QKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLM-NVDKLTRENVASHLQKFRVALK 239

Query: 264 HL----MAREAEAASWTHKWQMYAAAG 332
            +    + +   AA  +H  QM +  G
Sbjct: 240 KVSDDAIQQANRAAIDSHFMQMNSQKG 266

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>ARR20_ARATH (Q9LZJ8) Putative two-component response regulator ARR20|
          Length = 426

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
 Frame = +3

Query: 87  RKVKVDWTPELHRRFVQAVEQLG-LDKAVPSRILELMGNEYR---LTRHNIASHLQKYRS 254
           +K ++ WTPELH +F  AVE++G L+KA P  IL+ M  E     LTR+N+ASHLQKYR 
Sbjct: 210 KKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQ 269

Query: 255 HRK 263
             K
Sbjct: 270 SSK 272

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>ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Receiver-like|
           protein 3)
          Length = 521

 Score = 61.6 bits (148), Expect = 5e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = +3

Query: 87  RKVKVDWTPELHRRFVQAVEQLGLD-KAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 263
           +K +V W+ ELH +FV AV Q+G D KA P +IL+LM   + LTR N+ASHLQKYR +  
Sbjct: 192 KKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPW-LTRENVASHLQKYRLYLS 250

Query: 264 HL 269
            L
Sbjct: 251 RL 252

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>ARR13_ARATH (Q9ZVD3) Putative two-component response regulator ARR13|
          Length = 572

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = +3

Query: 87  RKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRKH 266
           +K K+ WT  L   F+QA++ +G DK VP +IL +M   Y LTR N+ASHLQKYR   K 
Sbjct: 224 KKKKIWWTNPLQDLFLQAIQHIGYDKVVPKKILAIMNVPY-LTRENVASHLQKYRLFVKR 282

Query: 267 LM 272
           ++
Sbjct: 283 VV 284

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>APRR4_ARATH (Q9FJ16) Putative two-component response regulator-like APRR4|
           (Pseudo-response regulator 4)
          Length = 292

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 26/52 (50%), Positives = 40/52 (76%)
 Frame = +3

Query: 87  RKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQ 242
           +K +V W  ELH+ F+ AV+ LGL++AVP +IL++M  +Y ++R N+ASHLQ
Sbjct: 222 KKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDY-ISRENVASHLQ 272

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>MYBF_ARATH (Q700D9) Putative Myb family transcription factor At1g14600|
          Length = 255

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = +3

Query: 96  KVDWTPELHRRFVQAVEQLGLD-KAVPSRILELMGNEYRLTRHNIASHLQKYRSHRKHLM 272
           ++ WTPELHR FV AV+ LG   KA P  +L++M +   LT  ++ SHLQ YR  R  L+
Sbjct: 25  RLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIM-DVKGLTISHVKSHLQMYRGSRITLL 83

Query: 273 AREAEAAS 296
            +  E++S
Sbjct: 84  GKPEESSS 91

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>ARR19_ARATH (Q9M9B9) Putative two-component response regulator ARR19|
          Length = 407

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 5/76 (6%)
 Frame = +3

Query: 87  RKVKVDWTPELHRRFVQAVEQL-GLDKAVPSRILELMGNEYR---LTRHNIASHLQKYRS 254
           RK ++ WT ELH++F++A+E + G++KA P  ++E +  E R   +TR N+ASHLQK+R 
Sbjct: 214 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECL-QEMRIEGITRSNVASHLQKHRI 272

Query: 255 H-RKHLMAREAEAASW 299
           +  ++ + ++ +   W
Sbjct: 273 NLEENQIPQQTQGNGW 288

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>V70K_TYMVC (P28478) 69 kDa protein|
          Length = 628

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = -1

Query: 188 LQDPRRHRL----VQPQLLHRLHEPPVQLRRPVHLH 93
           L +PRRHR     + P    R   PP +L+RPVHL+
Sbjct: 285 LPNPRRHRTSTGHIPPTTTSRPTGPPSRLQRPVHLY 320

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>V70K_TYMV (P10357) 69 kDa protein|
          Length = 628

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = -1

Query: 188 LQDPRRHRL----VQPQLLHRLHEPPVQLRRPVHLH 93
           L +PRRHR     + P    R   PP +L+RPVHL+
Sbjct: 285 LPNPRRHRTSTGHIPPTTTSRPTGPPSRLQRPVHLY 320

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>V70K_TYMVA (P20131) 69 kDa protein|
          Length = 628

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = -1

Query: 188 LQDPRRHRL----VQPQLLHRLHEPPVQLRRPVHLH 93
           L +PRRHR     +      R   PP +L+RPVHLH
Sbjct: 285 LPNPRRHRTSTGHIPSTTASRPTGPPSRLQRPVHLH 320

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>CCNB_DROME (P20439) G2/mitotic-specific cyclin-B|
          Length = 530

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 78  HGRRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYR 209
           H  R V +DW  E+H +F  A E   L  A+  R L+++ +  R
Sbjct: 287 HKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKR 330

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>ADD_PHOLL (Q7N4H5) Adenosine deaminase (EC 3.5.4.4) (Adenosine|
           aminohydrolase)
          Length = 333

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/53 (32%), Positives = 20/53 (37%)
 Frame = +3

Query: 183 LELMGNEYRLTRHNIASHLQKYRSHRKHLMAREAEAASWTHKWQMYAAAGGPR 341
           L+L G+E     H   SH  K R    H+     EAA     WQ     G  R
Sbjct: 166 LDLAGDELGFPGHLFQSHFTKARDAGWHITIHAGEAAGAESIWQAIRELGATR 218

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>CU093_HUMAN (P59091) Protein C21orf93|
          Length = 139

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = -1

Query: 173 RHRLVQPQLLHRLHEPPVQLRRPVHLHL---PPAVGALG 66
           RH+    Q+  R H P   L RP H+H    PP V ALG
Sbjct: 100 RHQTEPVQVASRWHVPSDGLCRPCHVHQLLHPPLVPALG 138

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>KR10A_HUMAN (P60014) Keratin-associated protein 10-10 (Keratin-associated|
           protein 10.10) (High sulfur keratin-associated protein
           10.10) (Keratin-associated protein 18-10)
           (Keratin-associated protein 18.10)
          Length = 251

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 169 TALSSPSCSTACTNRRCNSGVQSTFT 92
           + +SSP C TAC    C SG  S+ T
Sbjct: 46  SCVSSPCCQTACEPSACQSGYTSSCT 71

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>GATM_MOUSE (Q9D964) Glycine amidinotransferase, mitochondrial precursor (EC|
           2.1.4.1) (L-arginine:glycine amidinotransferase)
           (Transamidinase) (AT)
          Length = 423

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = +3

Query: 84  RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 263
           RR   +DW+ +         E  GL  A+P  IL ++GNE         S   +YR++R 
Sbjct: 142 RRPDPIDWSLKYK---TPDFESTGLYSAMPRDILMVVGNEIIEAPMAWRSRFFEYRAYRS 198

Query: 264 HLMAREAEAASWT 302
            +       A WT
Sbjct: 199 IIKDYFHRGAKWT 211

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>GATM_PONPY (Q5RFB9) Glycine amidinotransferase, mitochondrial precursor (EC|
           2.1.4.1) (L-arginine:glycine amidinotransferase)
           (Transamidinase) (AT)
          Length = 423

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = +3

Query: 84  RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 263
           RR   +DW+ +         E  GL  A+P  IL ++GNE         S   +YR++R 
Sbjct: 142 RRPDPIDWSLKYK---TPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRS 198

Query: 264 HLMAREAEAASWT 302
            +       A WT
Sbjct: 199 IIKDYFHRGAKWT 211

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>GATM_MACFA (Q4R806) Glycine amidinotransferase, mitochondrial precursor (EC|
           2.1.4.1) (L-arginine:glycine amidinotransferase)
           (Transamidinase) (AT)
          Length = 423

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = +3

Query: 84  RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 263
           RR   +DW+ +         E  GL  A+P  IL ++GNE         S   +YR++R 
Sbjct: 142 RRPDPIDWSLKYK---TPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRS 198

Query: 264 HLMAREAEAASWT 302
            +       A WT
Sbjct: 199 IIKDYFHRGAKWT 211

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>GATM_HUMAN (P50440) Glycine amidinotransferase, mitochondrial precursor (EC|
           2.1.4.1) (L-arginine:glycine amidinotransferase)
           (Transamidinase) (AT)
          Length = 423

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = +3

Query: 84  RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 263
           RR   +DW+ +         E  GL  A+P  IL ++GNE         S   +YR++R 
Sbjct: 142 RRPDPIDWSLKYK---TPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRS 198

Query: 264 HLMAREAEAASWT 302
            +       A WT
Sbjct: 199 IIKDYFHRGAKWT 211

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>VLTF_BPT5 (P13390) L-shaped tail fiber protein (Protein ltf)|
          Length = 1396

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 157 WTRRCRRGSWSSWATSTVS 213
           +TR C  G+WS+W  S VS
Sbjct: 774 FTRYCSNGTWSAWRESVVS 792

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>PBPA_PSEAE (Q07806) Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes:|
           Penicillin-insensitive transglycosylase (EC 2.4.2.-)
           (Peptidoglycan TGase); Penicillin-sensitive
           transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
          Length = 822

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 44  EDVGSRSDQELPRQAEGEGGLD 109
           ED G+  D E P  AEGEG ++
Sbjct: 618 EDAGNPGDPEHPESAEGEGSIE 639

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>ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII subunit A2|
           (Elongin A2) (EloA2) (Transcription elongation factor B
           polypeptide 3B)
          Length = 753

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 200 RVPSHAPQHRQPSPEVPVTQEAP 268
           R PSH+P+HR+ +   P  Q+ P
Sbjct: 120 RSPSHSPEHRRTARRTPPGQQRP 142

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>AADAT_HUMAN (Q8N5Z0) Kynurenine/alpha-aminoadipate aminotransferase|
           mitochondrial precursor (KAT/AadAT)
           (Kynurenine--oxoglutarate transaminase II) (EC 2.6.1.7)
           (Kynurenine aminotransferase II)
           (Kynurenine--oxoglutarate aminotransferase II)
           (2-aminoadipat
          Length = 425

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 155 PQLLHRLHEPPVQLRRPVHLHLPPAVGALGRC 60
           P+LL  L +  ++L  P  +H PP+ G +  C
Sbjct: 81  PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLC 112

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>PDR15_YEAST (Q04182) ATP-dependent permease PDR15|
          Length = 1529

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -2

Query: 355  AGASFLGPPAAAYICHLCVQLAASASLAIRCFLCDRYFWRW 233
            AG  +L  P+A  IC  C   A S + A        Y+ RW
Sbjct: 1453 AGTGYLSDPSATDICSFC---AVSTTNAFLATFSSHYYRRW 1490

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>ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII subunit A3|
           (Elongin A3) (EloA3) (Transcription elongation factor B
           polypeptide 3C)
          Length = 546

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 200 RVPSHAPQHRQPSPEVPVTQEAP 268
           R PSH+P+HR+ +   P  Q+ P
Sbjct: 120 RSPSHSPEHRRTARRTPPGQQRP 142

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>POL_HTLV2 (P03363) Pol polyprotein [Contains: Reverse|
           transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
           (RT); Integrase (IN)]
          Length = 982

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = -1

Query: 194 HELQDPRRHRLVQPQLLHRLHEPPVQLRRPVHLHLPPAVGALG 66
           H  +DPR    + PQ LH LH     L+      L PA+  LG
Sbjct: 376 HGYRDPRACITLTPQQLHALHAIQQALQHNCRGRLNPALPLLG 418

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>GATM_RAT (P50442) Glycine amidinotransferase, mitochondrial precursor (EC|
           2.1.4.1) (L-arginine:glycine amidinotransferase)
           (Transamidinase) (AT)
          Length = 423

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 20/73 (27%), Positives = 31/73 (42%)
 Frame = +3

Query: 84  RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 263
           +R   +DW+ +         E  GL  A+P  IL ++GNE         S   +YR++R 
Sbjct: 142 KRPDPIDWSLKYK---TPDFESTGLYSAMPRDILMVVGNEIIEAPMAWRSRFFEYRAYRS 198

Query: 264 HLMAREAEAASWT 302
            +       A WT
Sbjct: 199 IIKDYFHRGAKWT 211

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>UBP11_HUMAN (P51784) Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 11)
           (Ubiquitin-specific-processing protease 11)
           (Deubiquitinating enzyme 11)
          Length = 920

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 78  HGRRKVKVDWTPELHRRFVQAVEQLGLDK 164
           H +  + +DW PE+ +R+   VE  G  K
Sbjct: 695 HAQPYIAIDWEPEMKKRYYDEVEAEGYVK 723

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>UBP11_CANFA (Q01988) Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 11)
           (Ubiquitin-specific-processing protease 11)
           (Deubiquitinating enzyme 11) (Fragment)
          Length = 445

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 78  HGRRKVKVDWTPELHRRFVQAVEQLGLDK 164
           H +  + +DW PE+ +R+   VE  G  K
Sbjct: 220 HAQPYIAIDWEPEMKKRYYDEVEAEGYVK 248

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>RW1_MOUSE (O70472) RW1 protein|
          Length = 1829

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +2

Query: 209  SHAP--QHRQPSPEVPVTQEAP 268
            SH+P  QH QP P VP  QE P
Sbjct: 1244 SHSPLEQHSQPPPPVPQHQEPP 1265

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>GATM_PIG (P50441) Glycine amidinotransferase (EC 2.1.4.1)|
           (L-arginine:glycine amidinotransferase) (Transamidinase)
           (AT)
          Length = 386

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 20/73 (27%), Positives = 31/73 (42%)
 Frame = +3

Query: 84  RRKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRK 263
           RR   +DW+ +         E  GL  A+P  IL ++GNE         +   +YR++R 
Sbjct: 105 RRPDPIDWSVKYK---TPDFESTGLYGAMPRDILIVVGNEIIEAPMAWRARFFEYRAYRS 161

Query: 264 HLMAREAEAASWT 302
            +       A WT
Sbjct: 162 IIKDYFRRGAKWT 174

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>PRP33_DAUCA (P06600) Proline-rich 33 kDa extensin-related protein precursor|
           (Fragment)
          Length = 211

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = -1

Query: 170 HRLVQPQLLHR--LHEPPVQLRRPVH 99
           H + +PQ +HR  +H+PP + + PVH
Sbjct: 126 HPIHKPQPIHRPPVHKPPTEHKPPVH 151

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>YEHP_ECOLI (P33352) Hypothetical protein yehP|
          Length = 378

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 102 DWTPELHRRFVQAV-EQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRKHLMAR 278
           +W   +H  F Q V E+L  D  +   I +++ N   L R   +  L +   H KHLM  
Sbjct: 71  EWINSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRAVLHTKHLMNP 130

Query: 279 EAEAAS 296
           E  AA+
Sbjct: 131 EVLAAA 136


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.121    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,694,830
Number of Sequences: 219361
Number of extensions: 674119
Number of successful extensions: 3106
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3091
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result