| Clone Name | baet115h10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188697.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1542 Score = 315 bits (159), Expect = 5e-83 Identities = 230/253 (90%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 68 caagagctcccacggcaggcggaaggtgaaggtggactggacgccggagttgcaccggcg 127 ||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 621 caagaactctcacggcaagcgcaaggtgaaggtggactggacgccggagttgcaccggcg 680 Query: 128 gttcgtgcaggcggtggagcagctggggctggacaaggcggtgccgtcgcggatcctgga 187 |||||||||||||||||||||||| ||| | |||||||| |||||||| |||||||||| Sbjct: 681 gttcgtgcaggcggtggagcagctcgggatagacaaggccgtgccgtccaggatcctgga 740 Query: 188 gctcatgggcaacgagtaccgtctcacgcgccacaacatcgccagccatctccagaagta 247 ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||| || Sbjct: 741 gctcatgggcatcgagt---gcctcactcgccacaacatcgccagccatctccagaaata 797 Query: 248 ccggtcacacaggaagcacctgatggcgagggaggcggaggcggcgagctggacgcacaa 307 ||||| |||||||| || |||||||||||||||||||||||||||||||||||||| || Sbjct: 798 tcggtcgcacaggaaacatctgatggcgagggaggcggaggcggcgagctggacgcagaa 857 Query: 308 gtggcagatgtac 320 | ||||||||||| Sbjct: 858 gcggcagatgtac 870 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 22 cgtcggcagagggccacagcaagagga 48 ||||||||||||||||||||||||||| Sbjct: 560 cgtcggcagagggccacagcaagagga 586
>gb|AF318582.1|AF318582 Oryza sativa putative transcription factor OsGLK2 (Glk2) mRNA, partial cds Length = 1612 Score = 315 bits (159), Expect = 5e-83 Identities = 230/253 (90%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 68 caagagctcccacggcaggcggaaggtgaaggtggactggacgccggagttgcaccggcg 127 ||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 294 caagaactctcacggcaagcgcaaggtgaaggtggactggacgccggagttgcaccggcg 353 Query: 128 gttcgtgcaggcggtggagcagctggggctggacaaggcggtgccgtcgcggatcctgga 187 |||||||||||||||||||||||| ||| | |||||||| |||||||| |||||||||| Sbjct: 354 gttcgtgcaggcggtggagcagctcgggatagacaaggccgtgccgtccaggatcctgga 413 Query: 188 gctcatgggcaacgagtaccgtctcacgcgccacaacatcgccagccatctccagaagta 247 ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||| || Sbjct: 414 gctcatgggcatcgagt---gcctcactcgccacaacatcgccagccatctccagaaata 470 Query: 248 ccggtcacacaggaagcacctgatggcgagggaggcggaggcggcgagctggacgcacaa 307 ||||| |||||||| || |||||||||||||||||||||||||||||||||||||| || Sbjct: 471 tcggtcgcacaggaaacatctgatggcgagggaggcggaggcggcgagctggacgcagaa 530 Query: 308 gtggcagatgtac 320 | ||||||||||| Sbjct: 531 gcggcagatgtac 543 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 22 cgtcggcagagggccacagcaagagga 48 ||||||||||||||||||||||||||| Sbjct: 233 cgtcggcagagggccacagcaagagga 259
>dbj|AK121019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049D13, full insert sequence Length = 2378 Score = 315 bits (159), Expect = 5e-83 Identities = 230/253 (90%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 68 caagagctcccacggcaggcggaaggtgaaggtggactggacgccggagttgcaccggcg 127 ||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 982 caagaactctcacggcaagcgcaaggtgaaggtggactggacgccggagttgcaccggcg 1041 Query: 128 gttcgtgcaggcggtggagcagctggggctggacaaggcggtgccgtcgcggatcctgga 187 |||||||||||||||||||||||| ||| | |||||||| |||||||| |||||||||| Sbjct: 1042 gttcgtgcaggcggtggagcagctcgggatagacaaggccgtgccgtccaggatcctgga 1101 Query: 188 gctcatgggcaacgagtaccgtctcacgcgccacaacatcgccagccatctccagaagta 247 ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||| || Sbjct: 1102 gctcatgggcatcgagt---gcctcactcgccacaacatcgccagccatctccagaaata 1158 Query: 248 ccggtcacacaggaagcacctgatggcgagggaggcggaggcggcgagctggacgcacaa 307 ||||| |||||||| || |||||||||||||||||||||||||||||||||||||| || Sbjct: 1159 tcggtcgcacaggaaacatctgatggcgagggaggcggaggcggcgagctggacgcagaa 1218 Query: 308 gtggcagatgtac 320 | ||||||||||| Sbjct: 1219 gcggcagatgtac 1231 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 22 cgtcggcagagggccacagcaagagga 48 ||||||||||||||||||||||||||| Sbjct: 921 cgtcggcagagggccacagcaagagga 947
>gb|AF318579.1|AF318579 Zea mays putative transcription factor GOLDEN 2 mRNA, complete cds Length = 2192 Score = 218 bits (110), Expect = 9e-54 Identities = 211/244 (86%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 80 cggcaggcggaaggtgaaggtggactggacgccggagttgcaccggcggttcgtgcaggc 139 ||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 951 cggcaagcgcaaggtgaaggtggactggacgccggagctgcaccggcggttcgtgcaggc 1010 Query: 140 ggtggagcagctggggctggacaaggcggtgccgtcgcggatcctggagctcatgggcaa 199 ||||||||||||||| | |||||||| |||||||| ||||||||||| ||||||||| Sbjct: 1011 ggtggagcagctgggcatcgacaaggccgtgccgtccaggatcctggagatcatgggca- 1069 Query: 200 cgagtaccgtctcacgcgccacaacatcgccagccatctccagaagtaccggtcacacag 259 | || | ||||| | |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 1070 --cggactgcctcacaaggcacaacattgccagccacctccagaagtaccggtcgcacag 1127 Query: 260 gaagcacctgatggcgagggaggcggaggcggcgagctggacgcacaagtggcagatgta 319 ||||||||||||||| ||||||||||||| || | |||| |||| ||| | || ||||| Sbjct: 1128 aaagcacctgatggcgcgggaggcggaggccgccacctgggcgcagaagcgccacatgta 1187 Query: 320 cgcg 323 |||| Sbjct: 1188 cgcg 1191 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 12 aagtcgtcggcgtcggcagagggccacagca 42 ||||||||||||||||||||||||||||||| Sbjct: 886 aagtcgtcggcgtcggcagagggccacagca 916
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 190 bits (96), Expect = 2e-45 Identities = 134/146 (91%), Gaps = 3/146 (2%) Strand = Plus / Minus Query: 97 aggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggggc 156 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 7690790 aggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctcggga 7690731 Query: 157 tggacaaggcggtgccgtcgcggatcctggagctcatgggcaacgagtaccgtctcacgc 216 | |||||||| |||||||| ||||||||||||||||||||| ||||| | ||||| | Sbjct: 7690730 tagacaaggccgtgccgtccaggatcctggagctcatgggcatcgagt---gcctcactc 7690674 Query: 217 gccacaacatcgccagccatctccag 242 |||||||||||||||||||||||||| Sbjct: 7690673 gccacaacatcgccagccatctccag 7690648 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 240 cagaagtaccggtcacacaggaagcacctgatggcgagggaggcggaggcggcgagctgg 299 ||||| || ||||| |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 7688472 cagaaatatcggtcgcacaggaaacatctgatggcgagggaggcggaggcggcgagctgg 7688413 Query: 300 acgcacaagtggcagatgtac 320 ||||| ||| ||||||||||| Sbjct: 7688412 acgcagaagcggcagatgtac 7688392 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 22 cgtcggcagagggccacagcaagagga 48 ||||||||||||||||||||||||||| Sbjct: 7691862 cgtcggcagagggccacagcaagagga 7691836 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 tcgccagccatctccagaagtaccg 250 |||||||||| |||||||||||||| Sbjct: 36281058 tcgccagccacctccagaagtaccg 36281082 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ggaggcggaggcggcgagct 297 |||||||||||||||||||| Sbjct: 40251555 ggaggcggaggcggcgagct 40251574 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 aggcggaggcggcgagctgg 299 |||||||||||||||||||| Sbjct: 3010092 aggcggaggcggcgagctgg 3010111
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 190 bits (96), Expect = 2e-45 Identities = 134/146 (91%), Gaps = 3/146 (2%) Strand = Plus / Minus Query: 97 aggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggggc 156 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 101366 aggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctcggga 101307 Query: 157 tggacaaggcggtgccgtcgcggatcctggagctcatgggcaacgagtaccgtctcacgc 216 | |||||||| |||||||| ||||||||||||||||||||| ||||| | ||||| | Sbjct: 101306 tagacaaggccgtgccgtccaggatcctggagctcatgggcatcgagt---gcctcactc 101250 Query: 217 gccacaacatcgccagccatctccag 242 |||||||||||||||||||||||||| Sbjct: 101249 gccacaacatcgccagccatctccag 101224 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 240 cagaagtaccggtcacacaggaagcacctgatggcgagggaggcggaggcggcgagctgg 299 ||||| || ||||| |||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 99048 cagaaatatcggtcgcacaggaaacatctgatggcgagggaggcggaggcggcgagctgg 98989 Query: 300 acgcacaagtggcagatgtac 320 ||||| ||| ||||||||||| Sbjct: 98988 acgcagaagcggcagatgtac 98968 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 22 cgtcggcagagggccacagcaagagga 48 ||||||||||||||||||||||||||| Sbjct: 102438 cgtcggcagagggccacagcaagagga 102412
>dbj|AK061946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E04, full insert sequence Length = 1879 Score = 161 bits (81), Expect = 2e-36 Identities = 176/207 (85%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 95 gaaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggg 154 |||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||| || Sbjct: 772 gaaggtggactggacgcctgagcttcaccggaggttcgtgcaggcggtggagcagctcgg 831 Query: 155 gctggacaaggcggtgccgtcgcggatcctggagctcatgggcaacgagtaccgtctcac 214 | |||||||| ||||||||| |||| || ||| ||||||| | || || |||||| Sbjct: 832 catcgacaaggccgtgccgtcgaggatacttgagatcatggggatcg---actctctcac 888 Query: 215 gcgccacaacatcgccagccatctccagaagtaccggtcacacaggaagcacctgatggc 274 || |||||||| ||||||||||| |||||||||||||||||||| || ||| |||| || Sbjct: 889 ccggcacaacatagccagccatcttcagaagtaccggtcacacagaaaacacatgattgc 948 Query: 275 gagggaggcggaggcggcgagctggac 301 ||| ||||||||||| ||||| ||||| Sbjct: 949 gagagaggcggaggcagcgagttggac 975
>dbj|AK122161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147G01, full insert sequence Length = 1816 Score = 161 bits (81), Expect = 2e-36 Identities = 176/207 (85%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 95 gaaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggg 154 |||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||| || Sbjct: 775 gaaggtggactggacgcctgagcttcaccggaggttcgtgcaggcggtggagcagctcgg 834 Query: 155 gctggacaaggcggtgccgtcgcggatcctggagctcatgggcaacgagtaccgtctcac 214 | |||||||| ||||||||| |||| || ||| ||||||| | || || |||||| Sbjct: 835 catcgacaaggccgtgccgtcgaggatacttgagatcatggggatcg---actctctcac 891 Query: 215 gcgccacaacatcgccagccatctccagaagtaccggtcacacaggaagcacctgatggc 274 || |||||||| ||||||||||| |||||||||||||||||||| || ||| |||| || Sbjct: 892 ccggcacaacatagccagccatcttcagaagtaccggtcacacagaaaacacatgattgc 951 Query: 275 gagggaggcggaggcggcgagctggac 301 ||| ||||||||||| ||||| ||||| Sbjct: 952 gagagaggcggaggcagcgagttggac 978
>dbj|AK098915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I19, full insert sequence Length = 1616 Score = 161 bits (81), Expect = 2e-36 Identities = 176/207 (85%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 95 gaaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggg 154 |||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||| || Sbjct: 540 gaaggtggactggacgcctgagcttcaccggaggttcgtgcaggcggtggagcagctcgg 599 Query: 155 gctggacaaggcggtgccgtcgcggatcctggagctcatgggcaacgagtaccgtctcac 214 | |||||||| ||||||||| |||| || ||| ||||||| | || || |||||| Sbjct: 600 catcgacaaggccgtgccgtcgaggatacttgagatcatggggatcg---actctctcac 656 Query: 215 gcgccacaacatcgccagccatctccagaagtaccggtcacacaggaagcacctgatggc 274 || |||||||| ||||||||||| |||||||||||||||||||| || ||| |||| || Sbjct: 657 ccggcacaacatagccagccatcttcagaagtaccggtcacacagaaaacacatgattgc 716 Query: 275 gagggaggcggaggcggcgagctggac 301 ||| ||||||||||| ||||| ||||| Sbjct: 717 gagagaggcggaggcagcgagttggac 743
>dbj|AK098909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F22, full insert sequence Length = 1746 Score = 161 bits (81), Expect = 2e-36 Identities = 176/207 (85%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 95 gaaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggg 154 |||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||| || Sbjct: 639 gaaggtggactggacgcctgagcttcaccggaggttcgtgcaggcggtggagcagctcgg 698 Query: 155 gctggacaaggcggtgccgtcgcggatcctggagctcatgggcaacgagtaccgtctcac 214 | |||||||| ||||||||| |||| || ||| ||||||| | || || |||||| Sbjct: 699 catcgacaaggccgtgccgtcgaggatacttgagatcatggggatcg---actctctcac 755 Query: 215 gcgccacaacatcgccagccatctccagaagtaccggtcacacaggaagcacctgatggc 274 || |||||||| ||||||||||| |||||||||||||||||||| || ||| |||| || Sbjct: 756 ccggcacaacatagccagccatcttcagaagtaccggtcacacagaaaacacatgattgc 815 Query: 275 gagggaggcggaggcggcgagctggac 301 ||| ||||||||||| ||||| ||||| Sbjct: 816 gagagaggcggaggcagcgagttggac 842
>dbj|AK065184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D22, full insert sequence Length = 1746 Score = 161 bits (81), Expect = 2e-36 Identities = 176/207 (85%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 95 gaaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggg 154 |||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||| || Sbjct: 639 gaaggtggactggacgcctgagcttcaccggaggttcgtgcaggcggtggagcagctcgg 698 Query: 155 gctggacaaggcggtgccgtcgcggatcctggagctcatgggcaacgagtaccgtctcac 214 | |||||||| ||||||||| |||| || ||| ||||||| | || || |||||| Sbjct: 699 catcgacaaggccgtgccgtcgaggatacttgagatcatggggatcg---actctctcac 755 Query: 215 gcgccacaacatcgccagccatctccagaagtaccggtcacacaggaagcacctgatggc 274 || |||||||| ||||||||||| |||||||||||||||||||| || ||| |||| || Sbjct: 756 ccggcacaacatagccagccatcttcagaagtaccggtcacacagaaaacacatgattgc 815 Query: 275 gagggaggcggaggcggcgagctggac 301 ||| ||||||||||| ||||| ||||| Sbjct: 816 gagagaggcggaggcagcgagttggac 842
>gb|AF318581.1|AF318581 Oryza sativa putative transcription factor OsGLK1 (Glk1) mRNA, complete cds Length = 1965 Score = 159 bits (80), Expect = 7e-36 Identities = 177/207 (85%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 95 gaaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggg 154 |||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||| || Sbjct: 757 gaaggtggactggacgcctgagcttcaccggaggttcgtgcaggcggtggagcagctcgg 816 Query: 155 gctggacaaggcggtgccgtcgcggatcctggagctcatgggcaacgagtaccgtctcac 214 | |||||||| ||||||||| |||| || ||| ||||||| | ||| | || ||||| Sbjct: 817 catcgacaaggccgtgccgtcgaggatacttgagatcatggggatcgact--cg-ctcac 873 Query: 215 gcgccacaacatcgccagccatctccagaagtaccggtcacacaggaagcacctgatggc 274 || |||||||| ||||||||||| |||||||||||||||||||| || ||| |||| || Sbjct: 874 ccggcacaacatagccagccatcttcagaagtaccggtcacacagaaaacacatgattgc 933 Query: 275 gagggaggcggaggcggcgagctggac 301 ||| ||||||||||| ||||| ||||| Sbjct: 934 gagagaggcggaggcagcgagttggac 960
>gb|AF298118.1|AF298118 Zea mays putative transcription factor Golden2 gene, complete cds Length = 5168 Score = 139 bits (70), Expect = 7e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 97 aggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggggc 156 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2852 aggtggactggacgccggagctgcaccggcggttcgtgcaggcggtggagcagctgggca 2911 Query: 157 tggacaaggcggtgccgtcgcggatcctggagctcatgggca 198 | |||||||| |||||||| ||||||||||| ||||||||| Sbjct: 2912 tcgacaaggccgtgccgtccaggatcctggagatcatgggca 2953 Score = 79.8 bits (40), Expect = 5e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 240 cagaagtaccggtcacacaggaagcacctgatggcgagggaggcggaggcggcgagctgg 299 |||||||||||||| ||||| ||||||||||||||| ||||||||||||| || | |||| Sbjct: 3752 cagaagtaccggtcgcacagaaagcacctgatggcgcgggaggcggaggccgccacctgg 3811 Query: 300 acgcacaagtggcagatgtacgcg 323 |||| ||| | || ||||||||| Sbjct: 3812 gcgcagaagcgccacatgtacgcg 3835 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 12 aagtcgtcggcgtcggcagagggccacagca 42 ||||||||||||||||||||||||||||||| Sbjct: 1571 aagtcgtcggcgtcggcagagggccacagca 1601
>gb|AF318580.1|AF318580 Zea mays putative transcription factor ZmGLK1 (Glk1) mRNA, complete cds Length = 1843 Score = 137 bits (69), Expect = 3e-29 Identities = 167/199 (83%), Gaps = 3/199 (1%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctgggg 155 |||||||| |||||||||||| | |||||| | ||||| |||||||||||| ||||||| Sbjct: 745 aaggtggattggacgccggagcttcaccggagattcgttcaggcggtggaggagctgggc 804 Query: 156 ctggacaaggcggtgccgtcgcggatcctggagctcatgggcaacgagtaccgtctcacg 215 | ||||||||||||||||| ||||||| ||| ||||||| | ||| | | |||||| Sbjct: 805 atcgacaaggcggtgccgtccaggatcctcgagatcatggggatcgactcc---ctcacg 861 Query: 216 cgccacaacatcgccagccatctccagaagtaccggtcacacaggaagcacctgatggcg 275 || || ||||| ||||||||||| ||||||||||| || |||||||||||| || | ||| Sbjct: 862 cggcataacatagccagccatctgcagaagtaccgttcccacaggaagcacatgcttgcg 921 Query: 276 agggaggcggaggcggcga 294 ||||||| |||||| |||| Sbjct: 922 agggaggtggaggcagcga 940
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 95.6 bits (48), Expect = 9e-17 Identities = 87/100 (87%) Strand = Plus / Plus Query: 97 aggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggggc 156 |||||||||||||||| ||| | |||||| ||||||||||||||||||||||||| || Sbjct: 13921921 aggtggactggacgcctgagcttcaccggaggttcgtgcaggcggtggagcagctcggca 13921980 Query: 157 tggacaaggcggtgccgtcgcggatcctggagctcatggg 196 | |||||||| ||||||||| |||| || ||| ||||||| Sbjct: 13921981 tcgacaaggccgtgccgtcgaggatacttgagatcatggg 13922020 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 240 cagaagtaccggtcacacaggaagcacctgatggcgagggaggcggaggcggcgagctgg 299 |||||||||||||||||||| || ||| |||| ||||| ||||||||||| ||||| ||| Sbjct: 13923598 cagaagtaccggtcacacagaaaacacatgattgcgagagaggcggaggcagcgagttgg 13923657 Query: 300 ac 301 || Sbjct: 13923658 ac 13923659
>dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031J07 Length = 172511 Score = 95.6 bits (48), Expect = 9e-17 Identities = 87/100 (87%) Strand = Plus / Plus Query: 97 aggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggggc 156 |||||||||||||||| ||| | |||||| ||||||||||||||||||||||||| || Sbjct: 39141 aggtggactggacgcctgagcttcaccggaggttcgtgcaggcggtggagcagctcggca 39200 Query: 157 tggacaaggcggtgccgtcgcggatcctggagctcatggg 196 | |||||||| ||||||||| |||| || ||| ||||||| Sbjct: 39201 tcgacaaggccgtgccgtcgaggatacttgagatcatggg 39240 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 240 cagaagtaccggtcacacaggaagcacctgatggcgagggaggcggaggcggcgagctgg 299 |||||||||||||||||||| || ||| |||| ||||| ||||||||||| ||||| ||| Sbjct: 40818 cagaagtaccggtcacacagaaaacacatgattgcgagagaggcggaggcagcgagttgg 40877 Query: 300 ac 301 || Sbjct: 40878 ac 40879
>gb|AY988106.1| Zea mays golden2-like transcription factor gene, complete cds Length = 2379 Score = 87.7 bits (44), Expect = 2e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 97 aggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggggc 156 ||||||| |||||||||||| | |||||| | ||||| |||||||||||| ||||||| Sbjct: 852 aggtggattggacgccggagcttcaccggagattcgttcaggcggtggaggagctgggca 911 Query: 157 tggacaaggcggtgccgtcgcggatcctggagctcatggg 196 | ||||||||||||||||| ||||||| ||| ||||||| Sbjct: 912 tcgacaaggcggtgccgtccaggatcctcgagatcatggg 951 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 240 cagaagtaccggtcacacaggaagcacctgatggcgagggaggcggaggcggcga 294 ||||||||||| || |||||||||||| || | |||||||||| |||||| |||| Sbjct: 1087 cagaagtaccgctcccacaggaagcacatgcttgcgagggaggtggaggcagcga 1141
>gb|AY741685.1| Physcomitrella patens golden 2-like protein 2 (Glk2) gene, complete cds Length = 2270 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggg 154 ||||||||||||||||| ||| | |||||||| ||||| || || |||||||||||||| Sbjct: 710 aaggtggactggacgcctgagcttcaccggcgcttcgtccatgcagtggagcagctggg 768
>ref|NM_123786.2| Arabidopsis thaliana GLK2 (GOLDEN2-LIKE 2); DNA binding / transcription factor AT5G44190 (GLK2) mRNA, complete cds Length = 1403 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctgggg 155 |||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 511 aaggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattaggg 570 Query: 156 ctggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 571 gtagacaaggcggtgccgtc 590
>gb|AY026773.1| Arabidopsis thaliana golden2-like transcription factor (GLK2) mRNA, complete cds Length = 1161 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctgggg 155 |||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 445 aaggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattaggg 504 Query: 156 ctggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 505 gtagacaaggcggtgccgtc 524
>gb|AY124819.1| Arabidopsis thaliana AT5g44190/MLN1_11 mRNA, complete cds Length = 945 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctgggg 155 |||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 445 aaggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattaggg 504 Query: 156 ctggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 505 gtagacaaggcggtgccgtc 524
>gb|AY050386.1| Arabidopsis thaliana AT5g44190/MLN1_11 mRNA, complete cds Length = 1403 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctgggg 155 |||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 513 aaggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattaggg 572 Query: 156 ctggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 573 gtagacaaggcggtgccgtc 592
>emb|BX830124.1|CNS0A06Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctgggg 155 |||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 482 aaggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattaggg 541 Query: 156 ctggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 542 gtagacaaggcggtgccgtc 561
>emb|BX832409.1|CNS09ZPI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1341 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctgggg 155 |||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 483 aaggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattaggg 542 Query: 156 ctggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 543 gtagacaaggcggtgccgtc 562
>emb|BX831153.1|CNS09ZCZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1352 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctgggg 155 |||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 486 aaggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattaggg 545 Query: 156 ctggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 546 gtagacaaggcggtgccgtc 565
>emb|BX833954.1|CNS09YNE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL86ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1347 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctgggg 155 |||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 491 aaggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattaggg 550 Query: 156 ctggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 551 gtagacaaggcggtgccgtc 570
>dbj|AB062490.1| Arabidopsis thaliana mRNA for GPRI2, complete cds Length = 1334 Score = 56.0 bits (28), Expect = 8e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 96 aaggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctgggg 155 |||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 445 aaggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattaggg 504 Query: 156 ctggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 505 gtagacaaggcggtgccgtc 524
>gb|AF318583.1|AF318583 Oryza sativa putative transcription factor OsGLK2 (Glk2) gene, exon 1 and partial cds Length = 789 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 22 cgtcggcagagggccacagcaagagga 48 ||||||||||||||||||||||||||| Sbjct: 698 cgtcggcagagggccacagcaagagga 724
>gb|AY028368.1| Arabidopsis thaliana golden2-like protein 2 (GLK2) gene, complete cds Length = 2213 Score = 54.0 bits (27), Expect = 3e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 97 aggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggggc 156 ||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 827 aggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattagggg 886 Query: 157 tggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 887 tagacaaggcggtgccgtc 905
>dbj|AB005239.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLN1 Length = 84544 Score = 54.0 bits (27), Expect = 3e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 97 aggtggactggacgccggagttgcaccggcggttcgtgcaggcggtggagcagctggggc 156 ||||||| |||||||||||||| |||||| || || || ||||||||||| | ||| Sbjct: 57833 aggtggattggacgccggagttacaccggaaatttgtacaagcggtggagcaattagggg 57892 Query: 157 tggacaaggcggtgccgtc 175 | ||||||||||||||||| Sbjct: 57893 tagacaaggcggtgccgtc 57911
>dbj|AK109503.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A09, full insert sequence Length = 1335 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 22 cgtcggcagagggccacagcaagagga 48 ||||||||||||||||||||||||||| Sbjct: 1121 cgtcggcagagggccacagcaagagga 1147
>gb|AY105779.1| Zea mays PCO115129 mRNA sequence Length = 419 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 269 gatggcgagggaggcggaggcggc 292 |||||||||||||||||||||||| Sbjct: 58 gatggcgagggaggcggaggcggc 35
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Minus Query: 272 ggcgagggaggcggaggcggcga 294 ||||||||||||||||||||||| Sbjct: 165707 ggcgagggaggcggaggcggcga 165685
>gb|AF358745.1|AF358745 Serratia marcescens 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (entA) gene, partial cds Length = 1839 Score = 44.1 bits (22), Expect = 0.30 Identities = 28/30 (93%) Strand = Plus / Plus Query: 155 gctggacaaggcggtgccgtcgcggatcct 184 ||||||||||||||||| |||||| ||||| Sbjct: 346 gctggacaaggcggtgctgtcgcgcatcct 375
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 143 ggagcagctggggctggacaaggcggtgccgtcg 176 |||||||||||||||| |||||||| || ||||| Sbjct: 3391951 ggagcagctggggctgtacaaggcgatggcgtcg 3391918
>ref|NM_190577.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 579 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 tcgccagccatctccagaagtaccg 250 |||||||||| |||||||||||||| Sbjct: 368 tcgccagccacctccagaagtaccg 392
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 ttgcaccggcggttcgtgcaggcgg 141 ||||||||||||| ||||||||||| Sbjct: 3377598 ttgcaccggcggtacgtgcaggcgg 3377574
>ref|XM_680985.1| PREDICTED: Danio rerio similar to Protein CXorf17 homolog (LOC557842), mRNA Length = 3372 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 271 tggcgagggaggcggaggcggcgagctgg 299 ||||| ||||||||||||| ||||||||| Sbjct: 171 tggcgggggaggcggaggcagcgagctgg 143
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 tcgccagccatctccagaagtaccg 250 |||||||||| |||||||||||||| Sbjct: 30935 tcgccagccacctccagaagtaccg 30959
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 tcccacggcaggcggaaggtg 95 ||||||||||||||||||||| Sbjct: 6759270 tcccacggcaggcggaaggtg 6759250
>emb|BX649422.2| Mouse DNA sequence from clone RP23-70A22 on chromosome 2, complete sequence Length = 66930 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggagcagctggggctggacaa 163 ||||||||||||||||||||| Sbjct: 29614 ggagcagctggggctggacaa 29634
>dbj|AK066659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068K17, full insert sequence Length = 2363 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 tcgccagccatctccagaagtaccg 250 |||||||||| |||||||||||||| Sbjct: 519 tcgccagccacctccagaagtaccg 543
>ref|XM_550194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1332 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 aggcggaggcggcgagctgg 299 |||||||||||||||||||| Sbjct: 989 aggcggaggcggcgagctgg 1008
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggaaggtgaaggtggactgg 107 |||||||||||||||||||| Sbjct: 256 ggaaggtgaaggtggactgg 275
>gb|AE000658.1|HUAE000658 Homo sapiens T-cell receptor alpha delta locus from bases 1 to 250529 (section 1 of 5) of the Complete Nucleotide Sequence Length = 250529 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 81 ggcaggcggaaggtgaaggtggactgga 108 |||||||||||||| ||||||| ||||| Sbjct: 140128 ggcaggcggaaggtcaaggtggcctgga 140155
>gb|BC001970.1| Homo sapiens protein phosphatase 5, catalytic subunit, mRNA (cDNA clone MGC:5260 IMAGE:3459309), complete cds Length = 2075 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1774 ggtggagcagctggggctgg 1793
>ref|NM_001005466.1| Homo sapiens olfactory receptor, family 10, subfamily G, member 2 (OR10G2), mRNA Length = 933 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 81 ggcaggcggaaggtgaaggtggactgga 108 |||||||||||||| ||||||| ||||| Sbjct: 515 ggcaggcggaaggtcaaggtggcctgga 488
>gb|AY596305.1| Chlamydomonas reinhardtii cell wall protein GP2 (GP2) mRNA, partial cds Length = 4218 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 ggcgagggaggcggaggcggcgag 295 |||||||||||| ||||||||||| Sbjct: 650 ggcgagggaggcagaggcggcgag 627
>emb|X89416.1|HSRNAPPP5 H.sapiens mRNA for protein phosphatase 5 Length = 1987 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1697 ggtggagcagctggggctgg 1716
>gb|AF098992.2| Caenorhabditis elegans cosmid F53C3, complete sequence Length = 44323 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcgccagccatctccagaag 245 |||||||||||||||||||| Sbjct: 13205 tcgccagccatctccagaag 13224
>ref|NM_006247.2| Homo sapiens protein phosphatase 5, catalytic subunit (PPP5C), mRNA Length = 2075 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1774 ggtggagcagctggggctgg 1793
>emb|AL356503.18| Human DNA sequence from clone RP13-159A24 on chromosome Xq27.1-28, complete sequence Length = 147043 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ggcggaaggtgaaggtggac 104 |||||||||||||||||||| Sbjct: 102277 ggcggaaggtgaaggtggac 102258
>emb|AL109911.47|HS1107C24 Human DNA sequence from clone RP5-1107C24 on chromosome 20 Contains the 3' end of the TAF4 gene for TAF4 RNA polymerase II (TATA box binding protein (TBP)-associated factor, 135 kDa), the 3' end of the CDH4 gene for retinal cadherin 4 type 1 (R-cadherin) and six CpG islands, complete sequence Length = 121982 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 53 ggcagccgcagcgaccaagagctcccac 80 ||||||||||| ||||| |||||||||| Sbjct: 14197 ggcagccgcagggaccaggagctcccac 14224
>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7 Length = 344615 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgtgcaggcggtggagcagc 150 |||||||||||||||||||| Sbjct: 16815 cgtgcaggcggtggagcagc 16834
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ggagttgcaccggcggttcg 132 |||||||||||||||||||| Sbjct: 214055 ggagttgcaccggcggttcg 214036
>emb|CR859667.1| Pongo pygmaeus mRNA; cDNA DKFZp459E169 (from clone DKFZp459E169) Length = 2084 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1720 ggtggagcagctggggctgg 1739
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1485_B09 Length = 66599 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ggaggcggaggcggcgagct 297 |||||||||||||||||||| Sbjct: 50507 ggaggcggaggcggcgagct 50526
>emb|CR624518.1| full-length cDNA clone CS0DD001YG09 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1968 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1707 ggtggagcagctggggctgg 1726
>emb|CR621186.1| full-length cDNA clone CS0DA009YN02 of Neuroblastoma of Homo sapiens (human) Length = 1983 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1718 ggtggagcagctggggctgg 1737
>gb|AC104691.2| Homo sapiens BAC clone RP11-186E11 from 4, complete sequence Length = 118631 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aggcggaaggtgaaggtgga 103 |||||||||||||||||||| Sbjct: 49893 aggcggaaggtgaaggtgga 49874
>emb|CR614329.1| full-length cDNA clone CS0DB003YM06 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1281 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1008 ggtggagcagctggggctgg 1027
>dbj|AK094241.1| Homo sapiens cDNA FLJ36922 fis, clone BRACE2005083, highly similar to SERINE/THREONINE PROTEIN PHOSPHATASE 5 (EC 3.1.3.16) Length = 2272 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 2023 ggtggagcagctggggctgg 2042
>emb|CR609801.1| full-length cDNA clone CS0DI075YP18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1890 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1637 ggtggagcagctggggctgg 1656
>emb|CR608296.1| full-length cDNA clone CS0DJ015YL01 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1865 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1644 ggtggagcagctggggctgg 1663
>gb|AF435467.1| Drosophila pseudoobscura centromeric histone Cid (Cid) gene, complete cds Length = 774 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 cagccgcagcgaccaagagc 74 |||||||||||||||||||| Sbjct: 382 cagccgcagcgaccaagagc 401
>dbj|AB169898.1| Macaca fascicularis brain cDNA, clone: QtrA-10571, similar to human protein phosphatase 5, catalytic subunit (PPP5C), mRNA, RefSeq: NM_006247.2 Length = 2018 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1723 ggtggagcagctggggctgg 1742
>tpg|BK004670.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR14-41 pseudogene, complete sequence Length = 938 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 81 ggcaggcggaaggtgaaggtggactgga 108 |||||||||||||| ||||||| ||||| Sbjct: 515 ggcaggcggaaggtcaaggtggcctgga 488
>gb|AF100457.1|AF100457 Myxococcus xanthus selenocysteine-specific elongation factor (selB) gene, partial cds; spdSR operon, complete sequence Length = 4807 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 acggcaggcggaaggtgaaggtgg 102 ||||||| |||||||||||||||| Sbjct: 3149 acggcagccggaaggtgaaggtgg 3126
>dbj|AK223222.1| Homo sapiens mRNA for protein phosphatase 5, catalytic subunit variant, clone: STM00488 Length = 2076 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1724 ggtggagcagctggggctgg 1743
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ggaggcggaggcggcgagct 297 |||||||||||||||||||| Sbjct: 117333 ggaggcggaggcggcgagct 117352
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 aggcggtgccgtcgcggatc 182 |||||||||||||||||||| Sbjct: 159280 aggcggtgccgtcgcggatc 159299
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 aggcggaggcggcgagctgg 299 |||||||||||||||||||| Sbjct: 91609 aggcggaggcggcgagctgg 91628
>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1425D05, complete sequence Length = 66450 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ggaggcggaggcggcgagct 297 |||||||||||||||||||| Sbjct: 42905 ggaggcggaggcggcgagct 42924
>emb|CT806423.2| Pan troglodytes chromosome X clone CH251-25B01 map Xq28, complete sequence Length = 220032 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ggcggaaggtgaaggtggac 104 |||||||||||||||||||| Sbjct: 199272 ggcggaaggtgaaggtggac 199253
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggaaggtgaaggtggactgg 107 |||||||||||||||||||| Sbjct: 734 ggaaggtgaaggtggactgg 753
>gb|AC007193.1|AC007193 Homo sapiens chromosome 19, BAC 82621 (CIT-B-139a18), complete sequence Length = 146180 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 135774 ggtggagcagctggggctgg 135793
>gb|AF092918.1|AF092918 Pseudomonas alcaligenes outer membrane Xcp-secretion system gene cluster Length = 20758 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ggcggccggcgggccgagga 342 |||||||||||||||||||| Sbjct: 2761 ggcggccggcgggccgagga 2780
>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome 14 Length = 1071646 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 81 ggcaggcggaaggtgaaggtggactgga 108 |||||||||||||| ||||||| ||||| Sbjct: 140128 ggcaggcggaaggtcaaggtggcctgga 140155
>gb|U25174.1|PPP5C Human serine-threonine phosphatase (PP5) mRNA, partial cds Length = 1982 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 1692 ggtggagcagctggggctgg 1711
>dbj|AB209615.1| Homo sapiens mRNA for protein phosphatase 5, catalytic subunit variant protein Length = 4685 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggtggagcagctggggctgg 159 |||||||||||||||||||| Sbjct: 4399 ggtggagcagctggggctgg 4418
>emb|AL591209.17| Mouse DNA sequence from clone RP23-309H19 on chromosome 11, complete sequence Length = 199634 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 gtggagcagctggggctgga 160 |||||||||||||||||||| Sbjct: 145319 gtggagcagctggggctgga 145300
>gb|AC090053.5| Leishmania major strain Friedlin chromosome Unknown clone P323, complete sequence Length = 66637 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 aggcggtggagcagctggggctgg 159 |||||||||||||||||| ||||| Sbjct: 54766 aggcggtggagcagctggtgctgg 54789
>dbj|AB065894.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_457 Length = 1333 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 81 ggcaggcggaaggtgaaggtggactgga 108 |||||||||||||| ||||||| ||||| Sbjct: 715 ggcaggcggaaggtcaaggtggcctgga 688 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,820,365 Number of Sequences: 3902068 Number of extensions: 2820365 Number of successful extensions: 73707 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72588 Number of HSP's gapped (non-prelim): 1103 length of query: 356 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 334 effective length of database: 17,147,199,772 effective search space: 5727164723848 effective search space used: 5727164723848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)