ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet115g06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479621.1| Oryza sativa (japonica cultivar-group), mRNA Length = 993 Score = 176 bits (89), Expect = 4e-41 Identities = 238/287 (82%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 142 gagagctgcccgagggcggagcagatcgtcaaggagcaggtgaggagcctgtacgaggag 201 ||||| ||||||||||||||| || | || | |||| ||||| |||| |||||||||||| Sbjct: 106 gagaggtgcccgagggcggaggaggtggtgagggaggaggtgcggaggctgtacgaggag 165 Query: 202 cacggcaacacggccgtgtcgtggctccgggccctcttccacgactgcaccgtcaagtcc 261 |||||||||||||| ||||||||| | |||| |||||||||||||||| ||| | ||| Sbjct: 166 cacggcaacacggcggtgtcgtggttgagggcactcttccacgactgcatggtctactcc 225 Query: 262 tgcgacgcctccctcctcctggagaccgacgccgccaccggcctcgtctccgagcaggcc 321 |||||||||||||| || || | ||| | || |||| || ||||||||||||| || Sbjct: 226 tgcgacgcctccctgctgctccacaccaccaccaccacagg---cgtctccgagcagtcc 282 Query: 322 tcgccgaggagcttcggcatgcgcaacttcaagtacgtgggcgccatcaaggccgccctg 381 || | | ||||||||||||||||||||||||||| | |||||||||||||||| | Sbjct: 283 tcccaccgcagcttcggcatgcgcaacttcaagtacatcaccgccatcaaggccgccgtc 342 Query: 382 gagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 ||||| |||||||| | ||||||||||||||| ||| |||| ||||| Sbjct: 343 gagcgtgagtgccctgccaccgtctcctgcgccgacatcctcgccct 389
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 176 bits (89), Expect = 4e-41 Identities = 238/287 (82%), Gaps = 3/287 (1%) Strand = Plus / Minus Query: 142 gagagctgcccgagggcggagcagatcgtcaaggagcaggtgaggagcctgtacgaggag 201 ||||| ||||||||||||||| || | || | |||| ||||| |||| |||||||||||| Sbjct: 29508793 gagaggtgcccgagggcggaggaggtggtgagggaggaggtgcggaggctgtacgaggag 29508734 Query: 202 cacggcaacacggccgtgtcgtggctccgggccctcttccacgactgcaccgtcaagtcc 261 |||||||||||||| ||||||||| | |||| |||||||||||||||| ||| | ||| Sbjct: 29508733 cacggcaacacggcggtgtcgtggttgagggcactcttccacgactgcatggtctactcc 29508674 Query: 262 tgcgacgcctccctcctcctggagaccgacgccgccaccggcctcgtctccgagcaggcc 321 |||||||||||||| || || | ||| | || |||| || ||||||||||||| || Sbjct: 29508673 tgcgacgcctccctgctgctccacaccaccaccaccacagg---cgtctccgagcagtcc 29508617 Query: 322 tcgccgaggagcttcggcatgcgcaacttcaagtacgtgggcgccatcaaggccgccctg 381 || | | ||||||||||||||||||||||||||| | |||||||||||||||| | Sbjct: 29508616 tcccaccgcagcttcggcatgcgcaacttcaagtacatcaccgccatcaaggccgccgtc 29508557 Query: 382 gagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 ||||| |||||||| | ||||||||||||||| ||| |||| ||||| Sbjct: 29508556 gagcgtgagtgccctgccaccgtctcctgcgccgacatcctcgccct 29508510 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 399 caccgtctcctgcgcggacctcctggccctc 429 ||||||||||||||| |||||||| |||||| Sbjct: 252225 caccgtctcctgcgccgacctcctcgccctc 252255 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctc 429 ||||||| ||||||||||||||| ||| |||| |||||| Sbjct: 235454 tgcccggccaccgtctcctgcgccgacgtcctcgccctc 235492 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Minus Query: 236 tcttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 |||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 26504525 tcttccacgactgcttcgtccagggctgcgacgcctccgtcctcct 26504480
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0627E10 Length = 163388 Score = 176 bits (89), Expect = 4e-41 Identities = 238/287 (82%), Gaps = 3/287 (1%) Strand = Plus / Minus Query: 142 gagagctgcccgagggcggagcagatcgtcaaggagcaggtgaggagcctgtacgaggag 201 ||||| ||||||||||||||| || | || | |||| ||||| |||| |||||||||||| Sbjct: 35465 gagaggtgcccgagggcggaggaggtggtgagggaggaggtgcggaggctgtacgaggag 35406 Query: 202 cacggcaacacggccgtgtcgtggctccgggccctcttccacgactgcaccgtcaagtcc 261 |||||||||||||| ||||||||| | |||| |||||||||||||||| ||| | ||| Sbjct: 35405 cacggcaacacggcggtgtcgtggttgagggcactcttccacgactgcatggtctactcc 35346 Query: 262 tgcgacgcctccctcctcctggagaccgacgccgccaccggcctcgtctccgagcaggcc 321 |||||||||||||| || || | ||| | || |||| || ||||||||||||| || Sbjct: 35345 tgcgacgcctccctgctgctccacaccaccaccaccacagg---cgtctccgagcagtcc 35289 Query: 322 tcgccgaggagcttcggcatgcgcaacttcaagtacgtgggcgccatcaaggccgccctg 381 || | | ||||||||||||||||||||||||||| | |||||||||||||||| | Sbjct: 35288 tcccaccgcagcttcggcatgcgcaacttcaagtacatcaccgccatcaaggccgccgtc 35229 Query: 382 gagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 ||||| |||||||| | ||||||||||||||| ||| |||| ||||| Sbjct: 35228 gagcgtgagtgccctgccaccgtctcctgcgccgacatcctcgccct 35182
>dbj|AK061013.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B06, full insert sequence Length = 1084 Score = 176 bits (89), Expect = 4e-41 Identities = 238/287 (82%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 142 gagagctgcccgagggcggagcagatcgtcaaggagcaggtgaggagcctgtacgaggag 201 ||||| ||||||||||||||| || | || | |||| ||||| |||| |||||||||||| Sbjct: 3 gagaggtgcccgagggcggaggaggtggtgagggaggaggtgcggaggctgtacgaggag 62 Query: 202 cacggcaacacggccgtgtcgtggctccgggccctcttccacgactgcaccgtcaagtcc 261 |||||||||||||| ||||||||| | |||| |||||||||||||||| ||| | ||| Sbjct: 63 cacggcaacacggcggtgtcgtggttgagggcactcttccacgactgcatggtctactcc 122 Query: 262 tgcgacgcctccctcctcctggagaccgacgccgccaccggcctcgtctccgagcaggcc 321 |||||||||||||| || || | ||| | || |||| || ||||||||||||| || Sbjct: 123 tgcgacgcctccctgctgctccacaccaccaccaccacagg---cgtctccgagcagtcc 179 Query: 322 tcgccgaggagcttcggcatgcgcaacttcaagtacgtgggcgccatcaaggccgccctg 381 || | | ||||||||||||||||||||||||||| | |||||||||||||||| | Sbjct: 180 tcccaccgcagcttcggcatgcgcaacttcaagtacatcaccgccatcaaggccgccgtc 239 Query: 382 gagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 ||||| |||||||| | ||||||||||||||| ||| |||| ||||| Sbjct: 240 gagcgtgagtgccctgccaccgtctcctgcgccgacatcctcgccct 286
>tpe|BN000645.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx116 gene for class III peroxidase 116 precursor, exon 1 Length = 993 Score = 176 bits (89), Expect = 4e-41 Identities = 238/287 (82%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 142 gagagctgcccgagggcggagcagatcgtcaaggagcaggtgaggagcctgtacgaggag 201 ||||| ||||||||||||||| || | || | |||| ||||| |||| |||||||||||| Sbjct: 106 gagaggtgcccgagggcggaggaggtggtgagggaggaggtgcggaggctgtacgaggag 165 Query: 202 cacggcaacacggccgtgtcgtggctccgggccctcttccacgactgcaccgtcaagtcc 261 |||||||||||||| ||||||||| | |||| |||||||||||||||| ||| | ||| Sbjct: 166 cacggcaacacggcggtgtcgtggttgagggcactcttccacgactgcatggtctactcc 225 Query: 262 tgcgacgcctccctcctcctggagaccgacgccgccaccggcctcgtctccgagcaggcc 321 |||||||||||||| || || | ||| | || |||| || ||||||||||||| || Sbjct: 226 tgcgacgcctccctgctgctccacaccaccaccaccacagg---cgtctccgagcagtcc 282 Query: 322 tcgccgaggagcttcggcatgcgcaacttcaagtacgtgggcgccatcaaggccgccctg 381 || | | ||||||||||||||||||||||||||| | |||||||||||||||| | Sbjct: 283 tcccaccgcagcttcggcatgcgcaacttcaagtacatcaccgccatcaaggccgccgtc 342 Query: 382 gagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 ||||| |||||||| | ||||||||||||||| ||| |||| ||||| Sbjct: 343 gagcgtgagtgccctgccaccgtctcctgcgccgacatcctcgccct 389
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 367 atcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||| || ||||||| |||||||||||||||| Sbjct: 66960 atcaaggccgccctggagcacgcgtgcccgcgcaccgtctcctgcgc 67006
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 367 atcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||| || ||||||| |||||||||||||||| Sbjct: 20963728 atcaaggccgccctggagcacgcgtgcccgcgcaccgtctcctgcgc 20963774 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 391 tgcccgggcaccgtctcctgcgcggacctcct 422 |||||||| |||||||||||||| ||| |||| Sbjct: 23211367 tgcccggggaccgtctcctgcgccgacatcct 23211336
>dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F11, full insert sequence Length = 1351 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 367 atcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||| || ||||||| |||||||||||||||| Sbjct: 449 atcaaggccgccctggagcacgcgtgcccgcgcaccgtctcctgcgc 495
>tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx54 gene for class III peroxidase 54 precursor, exon 1 Length = 1038 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 367 atcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||| || ||||||| |||||||||||||||| Sbjct: 367 atcaaggccgccctggagcacgcgtgcccgcgcaccgtctcctgcgc 413
>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04, complete sequence Length = 140890 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 367 atcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||| || ||||||| |||||||||||||||| Sbjct: 9134 atcaaggccgccctggagcacgcgtgcccgcgcaccgtctcctgcgc 9180
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 379 ctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| ||| ||||||| ||||||||||||||| ||| |||| || |||||| Sbjct: 18852444 ctggagcacgactgcccggccaccgtctcctgcgccgacatcctcgcgctcgcc 18852391 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgc 413 |||||||||||||||||||||||| Sbjct: 16678875 gtgcccgggcaccgtctcctgcgc 16678898 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 388 gagtgcccgggcaccgtctcctgcgcggacctcctggccctcgc 431 |||||||||||| |||||||||||| |||||||| ||| |||| Sbjct: 7169309 gagtgcccgggcgtcgtctcctgcgccgacctcctcgccgtcgc 7169266 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 399 caccgtctcctgcgcggacctcctggccctcgcc 432 ||||||||||||||| ||| |||| ||||||||| Sbjct: 20358532 caccgtctcctgcgccgacatcctcgccctcgcc 20358499 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 399 caccgtctcctgcgcggacctcctggccctcgcc 432 ||||||||||||||| ||| |||| ||||||||| Sbjct: 20329290 caccgtctcctgcgccgacatcctcgccctcgcc 20329257 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Minus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| ||||||||||||||| ||| |||| || |||||| Sbjct: 18858611 tgcccggccaccgtctcctgcgccgacgtcctcgcgctcgcc 18858570 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 382 gagcgcgagtgcccgggcaccgtctcctgcgcggacctcct 422 |||| ||| ||||||| ||||||||||||||| ||| |||| Sbjct: 18847054 gagcacgactgcccggccaccgtctcctgcgccgacatcct 18847094
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485D10 Length = 147464 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 379 ctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| ||| ||||||| ||||||||||||||| ||| |||| || |||||| Sbjct: 18009 ctggagcacgactgcccggccaccgtctcctgcgccgacatcctcgcgctcgcc 17956 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Minus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| ||||||||||||||| ||| |||| || |||||| Sbjct: 24176 tgcccggccaccgtctcctgcgccgacgtcctcgcgctcgcc 24135 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 382 gagcgcgagtgcccgggcaccgtctcctgcgcggacctcct 422 |||| ||| ||||||| ||||||||||||||| ||| |||| Sbjct: 12619 gagcacgactgcccggccaccgtctcctgcgccgacatcct 12659
>tpe|BN000613.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx84 gene for class III peroxidase 84 precursor, exons 1-2 Length = 1087 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 379 ctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| ||| ||||||| ||||||||||||||| ||| |||| || |||||| Sbjct: 452 ctggagcacgactgcccggccaccgtctcctgcgccgacatcctcgcgctcgcc 505
>dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0664F03 Length = 184242 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgc 413 |||||||||||||||||||||||| Sbjct: 30362 gtgcccgggcaccgtctcctgcgc 30385
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 388 gagtgcccgggcaccgtctcctgcgcggacctcctggccctcgc 431 |||||||||||| |||||||||||| |||||||| ||| |||| Sbjct: 46720 gagtgcccgggcgtcgtctcctgcgccgacctcctcgccgtcgc 46677
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 388 gagtgcccgggcaccgtctcctgcgcggacctcctggccctcgc 431 |||||||||||| |||||||||||| |||||||| ||| |||| Sbjct: 4313 gagtgcccgggcgtcgtctcctgcgccgacctcctcgccgtcgc 4270
>tpe|BN000609.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx80 gene for class III peroxidase 80 precursor, exons 1-2 Length = 1149 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgc 413 |||||||||||||||||||||||| Sbjct: 507 gtgcccgggcaccgtctcctgcgc 530
>tpe|BN000605.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx76 gene for class III peroxidase 76 precursor, exon 1 Length = 984 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 388 gagtgcccgggcaccgtctcctgcgcggacctcctggccctcgc 431 |||||||||||| |||||||||||| |||||||| ||| |||| Sbjct: 331 gagtgcccgggcgtcgtctcctgcgccgacctcctcgccgtcgc 374
>ref|XM_470636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 46.1 bits (23), Expect = 0.094 Identities = 56/67 (83%) Strand = Plus / Plus Query: 366 catcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggc 425 ||||||||| ||||||||| || ||||| ||| |||||||||||| ||| |||| || Sbjct: 324 catcaaggctgccctggagaacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 383 Query: 426 cctcgcc 432 ||||||| Sbjct: 384 cctcgcc 390
>ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 351 gtgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 393
>ref|NM_191721.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| | |||||||||||||| ||| |||||| ||||||| Sbjct: 453 gtgcccgcggaccgtctcctgcgccgacatcctggtcctcgcc 495
>ref|XM_476366.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1050 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 399 caccgtctcctgcgcggacctcctggccctc 429 ||||||||||||||| |||||||| |||||| Sbjct: 408 caccgtctcctgcgccgacctcctcgccctc 438
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 41283 tgcccgggcaccgtctcctgcgc 41305
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.094 Identities = 56/67 (83%) Strand = Plus / Plus Query: 366 catcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggc 425 ||||||||| ||||||||| || ||||| ||| |||||||||||| ||| |||| || Sbjct: 7077259 catcaaggctgccctggagaacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 7077318 Query: 426 cctcgcc 432 ||||||| Sbjct: 7077319 cctcgcc 7077325
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 46.1 bits (23), Expect = 0.094 Identities = 56/67 (83%) Strand = Plus / Minus Query: 366 catcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggc 425 ||||||||| ||||||||| || ||||| ||| |||||||||||| ||| |||| || Sbjct: 5106 catcaaggctgccctggagaacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 5047 Query: 426 cctcgcc 432 ||||||| Sbjct: 5046 cctcgcc 5040
>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0039K08, complete sequence Length = 122163 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 17346 tgcccgggcaccgtctcctgcgc 17368
>emb|BX470078.6| Zebrafish DNA sequence from clone DKEYP-8C4 in linkage group 5, complete sequence Length = 184333 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 58 gcactgctgctcctgtgctgctg 80 ||||||||||||||||||||||| Sbjct: 15468 gcactgctgctcctgtgctgctg 15490
>emb|BX294169.10| Zebrafish DNA sequence from clone DKEY-151N15 in linkage group 5, complete sequence Length = 73230 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 58 gcactgctgctcctgtgctgctg 80 ||||||||||||||||||||||| Sbjct: 24863 gcactgctgctcctgtgctgctg 24885
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 25705003 tgcccgggcaccgtctcctgcgc 25705025
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 24438610 tgcccgggcaccgtctcctgcgc 24438632 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 |||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 2014050 tgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 2014091
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.094 Identities = 56/67 (83%) Strand = Plus / Plus Query: 366 catcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggc 425 ||||||||| ||||||||| || ||||| ||| |||||||||||| ||| |||| || Sbjct: 7075154 catcaaggctgccctggagaacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 7075213 Query: 426 cctcgcc 432 ||||||| Sbjct: 7075214 cctcgcc 7075220
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| | |||||||||||||| ||| |||||| ||||||| Sbjct: 29604759 gtgcccgcggaccgtctcctgcgccgacatcctggtcctcgcc 29604801 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 12551424 gtgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 12551466 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 42422216 cttccacgactgcttcgtccagggctgcgacgcctccatcctcct 42422260 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgc 431 ||||| ||||||||||||||||| ||| | || |||||||| Sbjct: 8917874 tgccccggcaccgtctcctgcgccgacatactcgccctcgc 8917914 Score = 40.1 bits (20), Expect = 5.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 369 caaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 |||||||||| | ||| || ||||||| ||||||||||||| || ||| |||| ||| | Sbjct: 12500973 caaggccgccgtcgaggccgcgtgcccgagcaccgtctcctgtgccgacatcctcgcctt 12501032 Query: 429 cgcc 432 |||| Sbjct: 12501033 cgcc 12501036 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgc 413 ||||||| |||||||||||||||| Sbjct: 12486037 gtgcccgcgcaccgtctcctgcgc 12486060
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 46.1 bits (23), Expect = 0.094 Identities = 56/67 (83%) Strand = Plus / Minus Query: 366 catcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggc 425 ||||||||| ||||||||| || ||||| ||| |||||||||||| ||| |||| || Sbjct: 117079 catcaaggctgccctggagaacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 117020 Query: 426 cctcgcc 432 ||||||| Sbjct: 117019 cctcgcc 117013
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| | |||||||||||||| ||| |||||| ||||||| Sbjct: 74579 gtgcccgcggaccgtctcctgcgccgacatcctggtcctcgcc 74621
>dbj|D14997.1|RICPEROX Oryza sativa (japonica cultivar-group) mRNA for peroxidase, complete cds Length = 1325 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 399 tgcccgggcaccgtctcctgcgc 421
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 63034 gtgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 63076 Score = 40.1 bits (20), Expect = 5.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 369 caaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 |||||||||| | ||| || ||||||| ||||||||||||| || ||| |||| ||| | Sbjct: 12583 caaggccgccgtcgaggccgcgtgcccgagcaccgtctcctgtgccgacatcctcgcctt 12642 Query: 429 cgcc 432 |||| Sbjct: 12643 cgcc 12646
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 137039 gtgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 137081 Score = 40.1 bits (20), Expect = 5.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 369 caaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 |||||||||| | ||| || ||||||| ||||||||||||| || ||| |||| ||| | Sbjct: 86588 caaggccgccgtcgaggccgcgtgcccgagcaccgtctcctgtgccgacatcctcgcctt 86647 Query: 429 cgcc 432 |||| Sbjct: 86648 cgcc 86651 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgc 413 ||||||| |||||||||||||||| Sbjct: 71652 gtgcccgcgcaccgtctcctgcgc 71675
>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446F04 Length = 175390 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 399 caccgtctcctgcgcggacctcctggccctc 429 ||||||||||||||| |||||||| |||||| Sbjct: 87089 caccgtctcctgcgccgacctcctcgccctc 87119 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctc 429 ||||||| ||||||||||||||| ||| |||| |||||| Sbjct: 70318 tgcccggccaccgtctcctgcgccgacgtcctcgccctc 70356
>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0617C02 Length = 135605 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 399 caccgtctcctgcgcggacctcctggccctc 429 ||||||||||||||| |||||||| |||||| Sbjct: 4224 caccgtctcctgcgccgacctcctcgccctc 4254
>dbj|AK108713.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-B05, full insert sequence Length = 1346 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 450 tgcccgggcaccgtctcctgcgc 472
>dbj|AK104950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-A02, full insert sequence Length = 1347 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 428 tgcccgggcaccgtctcctgcgc 450
>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full insert sequence Length = 1271 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 421 gtgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 463
>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full insert sequence Length = 1492 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 426 gtgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 468
>dbj|AK066855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082J20, full insert sequence Length = 1348 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 429 tgcccgggcaccgtctcctgcgc 451
>dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B01, full insert sequence Length = 1015 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 115 gtgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 157
>gb|AY106495.1| Zea mays PCO063105 mRNA sequence Length = 1396 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 387 cgagtgcccgggcaccgtctcctgcgcggacctcctggc 425 ||||||||| || |||||||||||||| ||||| ||||| Sbjct: 477 cgagtgccctggaaccgtctcctgcgcagacctgctggc 515
>tpe|BN000663.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx134 gene for class III peroxidase 134 precursor, exons 1-2 Length = 1524 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 871 tgcccgggcaccgtctcctgcgc 893
>tpe|BN000626.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx97 gene for class III peroxidase 97 precursor, exons 1-2 Length = 1107 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctc 429 ||||||| ||||||||||||||| ||| |||| |||||| Sbjct: 457 tgcccggccaccgtctcctgcgccgacgtcctcgccctc 495
>tpe|BN000623.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx94 gene for class III peroxidase 94 precursor, exon 1 Length = 1050 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 399 caccgtctcctgcgcggacctcctggccctc 429 ||||||||||||||| |||||||| |||||| Sbjct: 408 caccgtctcctgcgccgacctcctcgccctc 438
>tpe|BN000603.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx74 gene for class III peroxidase 74 precursor, exons 1-4 Length = 1311 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 456 tgcccgggcaccgtctcctgcgc 478
>tpe|BN000566.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx37 gene for class III peroxidase 37 precursor, exons 1-3 Length = 1188 Score = 46.1 bits (23), Expect = 0.094 Identities = 56/67 (83%) Strand = Plus / Plus Query: 366 catcaaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggc 425 ||||||||| ||||||||| || ||||| ||| |||||||||||| ||| |||| || Sbjct: 410 catcaaggctgccctggagaacgcctgccccggcgtcgtctcctgcgccgacatcctcgc 469 Query: 426 cctcgcc 432 ||||||| Sbjct: 470 cctcgcc 476
>tpe|BN000547.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx18 gene for class III peroxidase 18 precursor, exons 1-3 Length = 1289 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| | |||||||||||||| ||| |||||| ||||||| Sbjct: 559 gtgcccgcggaccgtctcctgcgccgacatcctggtcctcgcc 601
>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for class III peroxidase 15 precursor, exons 1-3 Length = 5322 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 4190 gtgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 4232
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgc 413 ||||||||||||||||||||||| Sbjct: 26023673 tgcccgggcaccgtctcctgcgc 26023695
>ref|XM_479274.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Plus Query: 236 tcttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 |||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 230 tcttccacgactgcttcgtccagggctgcgacgcctccgtcctcct 275
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 |||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 106927 tgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 106968
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Plus Query: 236 tcttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 |||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 7937844 tcttccacgactgcttcgtccagggctgcgacgcctccatcctcct 7937889 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||| ||||||||||||||||| ||| |||| ||| ||||| Sbjct: 7750957 tgccccggcaccgtctcctgcgccgacatcctcgccgtcgcc 7750998
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Minus Query: 236 tcttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 |||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 49796 tcttccacgactgcttcgtccagggctgcgacgcctccgtcctcct 49751
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 399 caccgtctcctgcgcggacctcctggccctcgcc 432 ||||||||||||||| ||| |||| ||||||||| Sbjct: 81927 caccgtctcctgcgccgacatcctcgccctcgcc 81894 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Minus Query: 399 caccgtctcctgcgcggacctcctggccctcgcc 432 ||||||||||||||| ||| |||| ||||||||| Sbjct: 52685 caccgtctcctgcgccgacatcctcgccctcgcc 52652
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||| ||||||||||||||||| ||| |||| ||| ||||| Sbjct: 87222 tgccccggcaccgtctcctgcgccgacatcctcgccgtcgcc 87263
>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0082C09 Length = 160665 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Plus Query: 236 tcttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 |||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 61259 tcttccacgactgcttcgtccagggctgcgacgcctccatcctcct 61304
>dbj|AK121950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J23, full insert sequence Length = 1345 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 399 caccgtctcctgcgcggacctcctggccctcgcc 432 ||||||||||||||| ||| |||| ||||||||| Sbjct: 467 caccgtctcctgcgccgacatcctcgccctcgcc 500
>dbj|AK108037.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C10, full insert sequence Length = 1326 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Plus Query: 236 tcttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 |||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 335 tcttccacgactgcttcgtccagggctgcgacgcctccatcctcct 380
>dbj|AK073833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068K09, full insert sequence Length = 1280 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 399 caccgtctcctgcgcggacctcctggccctcgcc 432 ||||||||||||||| ||| |||| ||||||||| Sbjct: 453 caccgtctcctgcgccgacatcctcgccctcgcc 486
>dbj|AK072761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143E11, full insert sequence Length = 1379 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| ||||||||||||||| ||| |||| || |||||| Sbjct: 520 tgcccggccaccgtctcctgcgccgacgtcctcgcgctcgcc 561
>dbj|AK061144.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C10, full insert sequence Length = 1319 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| ||||||||||||||| ||| |||| || |||||| Sbjct: 518 tgcccggccaccgtctcctgcgccgacgtcctcgcgctcgcc 559
>tpe|BN000634.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx105 gene for class III peroxidase 105 precursor, exon 1 Length = 1023 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Plus Query: 236 tcttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 |||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 230 tcttccacgactgcttcgtccagggctgcgacgcctccgtcctcct 275
>tpe|BN000617.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx88 gene for class III peroxidase 88 precursor, exons 1-3 Length = 1139 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 399 caccgtctcctgcgcggacctcctggccctcgcc 432 ||||||||||||||| ||| |||| ||||||||| Sbjct: 456 caccgtctcctgcgccgacatcctcgccctcgcc 489
>tpe|BN000615.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx86 gene for class III peroxidase 86 precursor, exons 1-3 Length = 1188 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 399 caccgtctcctgcgcggacctcctggccctcgcc 432 ||||||||||||||| ||| |||| ||||||||| Sbjct: 486 caccgtctcctgcgccgacatcctcgccctcgcc 519
>tpe|BN000612.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx83 gene for class III peroxidase 83 precursor, exons 1-2 Length = 1176 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||||| ||||||||||||||| ||| |||| || |||||| Sbjct: 535 tgcccggccaccgtctcctgcgccgacgtcctcgcgctcgcc 576
>tpe|BN000599.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx70 gene for class III peroxidase 70 precursor, exons 1-2 Length = 1356 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 |||||| |||||||||||||||| ||| |||| ||| ||||| Sbjct: 694 tgcccgcgcaccgtctcctgcgccgacatcctcgccttcgcc 735
>tpe|BN000559.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx30 gene for class III peroxidase 30 precursor, exons 1-2 Length = 1059 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Plus Query: 236 tcttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 |||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 200 tcttccacgactgcttcgtccagggctgcgacgcctccatcctcct 245
>tpe|BN000556.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx27 gene for class III peroxidase 27 precursor, exons 1-3 Length = 1821 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgcc 432 ||||| ||||||||||||||||| ||| |||| ||| ||||| Sbjct: 479 tgccccggcaccgtctcctgcgccgacatcctcgccgtcgcc 520
>emb|AL663104.17| Mouse DNA sequence from clone RP23-207H18 on chromosome X, complete sequence Length = 211462 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 gaggagcttcggcatgcgcaac 348 |||||||||||||||||||||| Sbjct: 93085 gaggagcttcggcatgcgcaac 93106
>ref|NM_187980.1| Oryza sativa (japonica cultivar-group), Ozsa8400 predicted mRNA Length = 1008 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgc 431 ||||| ||||||||||||||||| ||| | || |||||||| Sbjct: 358 tgccccggcaccgtctcctgcgccgacatactcgccctcgc 398
>ref|NM_194529.1| Oryza sativa (japonica cultivar-group) putative peroxidase (OSJNBa0065H03.11), mRNA Length = 534 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||||| ||||||||||||| ||||||| Sbjct: 252 cttccacgactgcttcgtcaacggctgcgacgcctccatcctcct 296
>ref|NM_189371.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 237 cttccacgactgcttcgtccagggctgcgacgcctccatcctcct 281
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 tggttggaatgctgccgcttc 107 ||||||||||||||||||||| Sbjct: 703601 tggttggaatgctgccgcttc 703621
>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0065H03, complete sequence Length = 141017 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||||| ||||||||||||| ||||||| Sbjct: 72403 cttccacgactgcttcgtcaacggctgcgacgcctccatcctcct 72359
>gb|AC129195.3| Mus musculus BAC clone RP24-150H14 from chromosome 1, complete sequence Length = 152726 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 tcctgtgctgctgcttcactg 88 ||||||||||||||||||||| Sbjct: 8960 tcctgtgctgctgcttcactg 8940
>ref|XM_544403.2| PREDICTED: Canis familiaris similar to Iroquois related homeobox 3 (LOC487277), mRNA Length = 2198 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 gcccgagggcggagcagatcg 169 ||||||||||||||||||||| Sbjct: 1944 gcccgagggcggagcagatcg 1964
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||||| ||||||||||||| ||||||| Sbjct: 468229 cttccacgactgcttcgtcaacggctgcgacgcctccatcctcct 468185
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||||| ||||||||||||| ||||||| Sbjct: 468229 cttccacgactgcttcgtcaacggctgcgacgcctccatcctcct 468185
>gb|AC117500.13| Homo sapiens 12 BAC RP11-495K9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180995 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gatgggtctgagctcaagcct 41 ||||||||||||||||||||| Sbjct: 60679 gatgggtctgagctcaagcct 60659
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 81554 cttccacgactgcttcgtccagggctgcgacgcctccatcctcct 81598
>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0453A06 Length = 154378 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgc 431 ||||| ||||||||||||||||| ||| | || |||||||| Sbjct: 25629 tgccccggcaccgtctcctgcgccgacatactcgccctcgc 25669
>dbj|AK109340.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E11, full insert sequence Length = 1346 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 357 cttccacgactgcttcgtccagggctgcgacgcctccatcctcct 401
>dbj|AK119199.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D02, full insert sequence Length = 1390 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 357 cttccacgactgcttcgtccagggctgcgacgcctccatcctcct 401
>dbj|AK104420.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C03, full insert sequence Length = 1397 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 357 cttccacgactgcttcgtccagggctgcgacgcctccatcctcct 401
>dbj|AK104065.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F04, full insert sequence Length = 1394 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 357 cttccacgactgcttcgtccagggctgcgacgcctccatcctcct 401
>dbj|AK102117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084K24, full insert sequence Length = 1290 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgc 431 ||||| ||||||||||||||||| ||| | || |||||||| Sbjct: 466 tgccccggcaccgtctcctgcgccgacatactcgccctcgc 506
>dbj|AK073009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145L12, full insert sequence Length = 1395 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 358 cttccacgactgcttcgtccagggctgcgacgcctccatcctcct 402
>dbj|AK061583.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A08, full insert sequence Length = 1289 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgc 431 ||||| ||||||||||||||||| ||| | || |||||||| Sbjct: 465 tgccccggcaccgtctcctgcgccgacatactcgccctcgc 505
>tpe|BN000653.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx124 gene for class III peroxidase 124 precursor, exons 1-2 Length = 6789 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||||| ||||||||||||| ||||||| Sbjct: 252 cttccacgactgcttcgtcaacggctgcgacgcctccatcctcct 296
>tpe|BN000614.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx85 gene for class III peroxidase 85 precursor, exons 1-2 Length = 1052 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 382 gagcgcgagtgcccgggcaccgtctcctgcgcggacctcct 422 |||| ||| ||||||| ||||||||||||||| ||| |||| Sbjct: 417 gagcacgactgcccggccaccgtctcctgcgccgacatcct 457
>tpe|BN000549.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx20 gene for class III peroxidase 20 precursor, exons 1-2 Length = 2747 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||| || ||||||||||||| ||||||| Sbjct: 237 cttccacgactgcttcgtccagggctgcgacgcctccatcctcct 281
>tpe|BN000532.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx3 gene for class III peroxidase 3 precursor, exons 1-4 Length = 1932 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcctggccctcgc 431 ||||| ||||||||||||||||| ||| | || |||||||| Sbjct: 1012 tgccccggcaccgtctcctgcgccgacatactcgccctcgc 1052
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 237 cttccacgactgcaccgtcaagtcctgcgacgcctccctcctcct 281 ||||||||||||| |||||| ||||||||||||| ||||||| Sbjct: 468226 cttccacgactgcttcgtcaacggctgcgacgcctccatcctcct 468182
>ref|XM_479755.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1398 Score = 40.1 bits (20), Expect = 5.8 Identities = 58/68 (85%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 366 catcaaggccgccctggag-cgcgagtgcccgggcaccgtctcctgcgcggacctcctgg 424 |||||||| |||||| ||| |||| |||||| ||| |||||||||||| ||| |||| | Sbjct: 378 catcaaggacgccctcgagtcgcg-gtgccccggcgtcgtctcctgcgccgacgtcctcg 436 Query: 425 ccctcgcc 432 |||||||| Sbjct: 437 ccctcgcc 444
>ref|NM_183812.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 40.1 bits (20), Expect = 5.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 369 caaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 |||||||||| | ||| || ||||||| ||||||||||||| || ||| |||| ||| | Sbjct: 303 caaggccgccgtcgaggccgcgtgcccgagcaccgtctcctgtgccgacatcctcgcctt 362 Query: 429 cgcc 432 |||| Sbjct: 363 cgcc 366
>ref|NM_183810.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgc 413 ||||||| |||||||||||||||| Sbjct: 336 gtgcccgcgcaccgtctcctgcgc 359
>ref|XM_472786.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1008 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcct 422 |||||||| |||||||||||||| ||| |||| Sbjct: 373 tgcccggggaccgtctcctgcgccgacatcct 404
>ref|XM_612679.2| PREDICTED: Bos taurus similar to iron-sulfur cluster assembly enzyme isoform ISCU2 precursor (LOC533308), mRNA Length = 980 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 441 cgccatcaaggccgccctgg 460
>gb|AC104613.2| Drosophila melanogaster clone BACR06K07, complete sequence Length = 152934 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 caagtacgtgggcgccatca 370 |||||||||||||||||||| Sbjct: 76910 caagtacgtgggcgccatca 76929
>ref|XM_592694.2| PREDICTED: Bos taurus similar to iron-sulfur cluster assembly enzyme isoform ISCU2 precursor, transcript variant 1 (LOC514789), mRNA Length = 987 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 456 cgccatcaaggccgccctgg 475
>ref|XM_866590.1| PREDICTED: Bos taurus similar to iron-sulfur cluster assembly enzyme isoform ISCU2 precursor, transcript variant 2 (LOC514789), mRNA Length = 990 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 459 cgccatcaaggccgccctgg 478
>ref|XM_878693.1| PREDICTED: Bos taurus similar to iron-sulfur cluster assembly enzyme isoform ISCU2 precursor, transcript variant 3 (LOC514789), mRNA Length = 852 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 321 cgccatcaaggccgccctgg 340
>ref|NM_025526.1| Mus musculus NifU-like N-terminal domain containing (Nifun), mRNA Length = 885 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 452 cgccatcaaggccgccctgg 471
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctggagcg 386 ||||||||||||||| |||||||| Sbjct: 3325298 cgccatcaaggccgcgctggagcg 3325321
>ref|XM_978516.1| PREDICTED: Mus musculus similar to nitrogen fixation cluster-like (LOC433217), mRNA Length = 900 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 459 cgccatcaaggccgccctgg 478
>ref|XM_984437.1| PREDICTED: Mus musculus similar to nitrogen fixation cluster-like (LOC666538), mRNA Length = 902 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 459 cgccatcaaggccgccctgg 478
>ref|XM_978872.1| PREDICTED: Mus musculus similar to nitrogen fixation cluster-like (LOC675027), mRNA Length = 902 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 459 cgccatcaaggccgccctgg 478
>gb|AC109225.13| Mus musculus chromosome 19, clone RP23-395B21, complete sequence Length = 257062 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 41423 cgccatcaaggccgccctgg 41404
>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence Length = 243006 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 agatgggtctgagctcaagcctgg 43 |||||||||||| ||||||||||| Sbjct: 16168 agatgggtctgatctcaagcctgg 16145
>gb|AC159240.3| Mus musculus BAC clone RP24-555M20 from chromosome 5, complete sequence Length = 197104 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 153382 cgccatcaaggccgccctgg 153363
>emb|AL590103.12| Human DNA sequence from clone RP11-132G19 on chromosome 1 Contains a novel gene, the 3' end of the HSPG2 gene for heparan sulfate proteoglycan 2 (perlecan), the 5' end of the USP31 gene for ubiquitin specific protease 31 and a CpG island, complete sequence Length = 175162 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 caaggagcaggtgaggagcc 190 |||||||||||||||||||| Sbjct: 164868 caaggagcaggtgaggagcc 164849
>emb|AL392111.12| Human DNA sequence from clone RP11-487I5 on chromosome 10 Contains the DUSP13 gene for dual specificity phosphatase 13 (BEDP, TMDP, FLJ32450), the gene for a novel protein (FLJ25082), the 5' end fo the VDAC2 gene for voltage-dependent anion channel 2, a peptidylprolyl isomerase A (cyclophilin A)(PPIA)(CYPA, CYPH) pseudogene, a ribosomal protein S26 (RPS26) pseudogene and two CpG islands, complete sequence Length = 159365 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gctgctcctgtgctgctgct 82 |||||||||||||||||||| Sbjct: 31617 gctgctcctgtgctgctgct 31636
>ref|XM_964311.1| PREDICTED: Tribolium castaneum similar to CG16718-PA, isoform A (LOC657882), mRNA Length = 3108 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tcggcatgcgcaacttcaag 354 |||||||||||||||||||| Sbjct: 715 tcggcatgcgcaacttcaag 696
>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216116 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 agcctggtgccagtggcgtctgca 60 ||||||||||||||||| |||||| Sbjct: 130164 agcctggtgccagtggcctctgca 130187
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 391 tgcccgggcaccgtctcctgcgcggacctcct 422 |||||||| |||||||||||||| ||| |||| Sbjct: 101559 tgcccggggaccgtctcctgcgccgacatcct 101528
>gb|AY118883.1| Drosophila melanogaster HL01686 full insert cDNA Length = 2260 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 caagtacgtgggcgccatca 370 |||||||||||||||||||| Sbjct: 1773 caagtacgtgggcgccatca 1754
>ref|NM_001032053.1| Drosophila melanogaster Muscle-specific protein 300 CG33715-RB, transcript variant B (Msp-300), mRNA Length = 23517 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 caagtacgtgggcgccatca 370 |||||||||||||||||||| Sbjct: 23090 caagtacgtgggcgccatca 23071
>ref|NM_001032052.1| Drosophila melanogaster Muscle-specific protein 300 CG33715-RE, transcript variant E (Msp-300), mRNA Length = 29517 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 caagtacgtgggcgccatca 370 |||||||||||||||||||| Sbjct: 1773 caagtacgtgggcgccatca 1754
>ref|NM_001032051.1| Drosophila melanogaster Muscle-specific protein 300 CG33715-RD, transcript variant D (Msp-300), mRNA Length = 35469 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 caagtacgtgggcgccatca 370 |||||||||||||||||||| Sbjct: 23090 caagtacgtgggcgccatca 23071
>gb|AY069852.1| Drosophila melanogaster SD10272 full length cDNA Length = 2628 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 caagtacgtgggcgccatca 370 |||||||||||||||||||| Sbjct: 2184 caagtacgtgggcgccatca 2165
>dbj|AK009421.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310020H20 product:hypothetical Nitrogen-fixing NifU-like, N-terminal containing protein, full insert sequence Length = 884 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 455 cgccatcaaggccgccctgg 474
>gb|AC158239.2| Mus musculus BAC clone RP23-48A24 from chromosome 10, complete sequence Length = 256496 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 agatgggtctgagctcaagcctgg 43 |||||||||||| ||||||||||| Sbjct: 72063 agatgggtctgatctcaagcctgg 72086
>dbj|AK039834.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430015M20 product:ISCU2 (UNKNOWN) (PROTEIN FOR MGC:20315) homolog [Homo sapiens], full insert sequence Length = 920 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 493 cgccatcaaggccgccctgg 512
>dbj|AK009021.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2300003J05 product:ISCU2 (UNKNOWN) (PROTEIN FOR MGC:20315) homolog [Homo sapiens], full insert sequence Length = 885 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 452 cgccatcaaggccgccctgg 471
>dbj|AK083247.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630031C10 product:ISCU2 (UNKNOWN) (PROTEIN FOR MGC:20315) homolog [Homo sapiens], full insert sequence Length = 887 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 459 cgccatcaaggccgccctgg 478
>gb|BC096049.1| Mus musculus NifU-like N-terminal domain containing, mRNA (cDNA clone MGC:106935 IMAGE:3466271), complete cds Length = 896 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 449 cgccatcaaggccgccctgg 468
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.8 Identities = 58/68 (85%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 366 catcaaggccgccctggag-cgcgagtgcccgggcaccgtctcctgcgcggacctcctgg 424 |||||||| |||||| ||| |||| |||||| ||| |||||||||||| ||| |||| | Sbjct: 691209 catcaaggacgccctcgagtcgcg-gtgccccggcgtcgtctcctgcgccgacgtcctcg 691267 Query: 425 ccctcgcc 432 |||||||| Sbjct: 691268 ccctcgcc 691275
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 cgccatcaaggccgccctggagcg 386 ||||||||||||||| |||||||| Sbjct: 223633 cgccatcaaggccgcgctggagcg 223610
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 40.1 bits (20), Expect = 5.8 Identities = 58/68 (85%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 366 catcaaggccgccctggag-cgcgagtgcccgggcaccgtctcctgcgcggacctcctgg 424 |||||||| |||||| ||| |||| |||||| ||| |||||||||||| ||| |||| | Sbjct: 118587 catcaaggacgccctcgagtcgcg-gtgccccggcgtcgtctcctgcgccgacgtcctcg 118645 Query: 425 ccctcgcc 432 |||||||| Sbjct: 118646 ccctcgcc 118653
>dbj|AK108345.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B05, full insert sequence Length = 1175 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 gtgcccgggcaccgtctcctgcgc 413 ||||||| |||||||||||||||| Sbjct: 1010 gtgcccgcgcaccgtctcctgcgc 987
>dbj|AK069503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019J18, full insert sequence Length = 1398 Score = 40.1 bits (20), Expect = 5.8 Identities = 58/68 (85%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 366 catcaaggccgccctggag-cgcgagtgcccgggcaccgtctcctgcgcggacctcctgg 424 |||||||| |||||| ||| |||| |||||| ||| |||||||||||| ||| |||| | Sbjct: 378 catcaaggacgccctcgagtcgcg-gtgccccggcgtcgtctcctgcgccgacgtcctcg 436 Query: 425 ccctcgcc 432 |||||||| Sbjct: 437 ccctcgcc 444
>dbj|AK068894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001H23, full insert sequence Length = 1382 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgc 413 ||||||| |||||||||||||||| Sbjct: 443 gtgcccgcgcaccgtctcctgcgc 466
>emb|AL445799.1|CNS07EDD Homo sapiens (human) Human Heparan Sulfate Proteoglycan (HSPG2) gene, exons 8 and 9 Length = 594 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 caaggagcaggtgaggagcc 190 |||||||||||||||||||| Sbjct: 28 caaggagcaggtgaggagcc 47
>gb|BC048409.1| Mus musculus NifU-like N-terminal domain containing, mRNA (cDNA clone MGC:57075 IMAGE:6484953), complete cds Length = 935 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 448 cgccatcaaggccgccctgg 467
>dbj|AK061371.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E09, full insert sequence Length = 1097 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgc 413 ||||||| |||||||||||||||| Sbjct: 139 gtgcccgcgcaccgtctcctgcgc 162
>dbj|AK058883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B11, full insert sequence Length = 1144 Score = 40.1 bits (20), Expect = 5.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 369 caaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 |||||||||| | ||| || ||||||| ||||||||||||| || ||| |||| ||| | Sbjct: 102 caaggccgccgtcgaggccgcgtgcccgagcaccgtctcctgtgccgacatcctcgcctt 161 Query: 429 cgcc 432 |||| Sbjct: 162 cgcc 165
>tpe|BN000646.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx117 gene for class III peroxidase 117 precursor, exon 1 Length = 948 Score = 40.1 bits (20), Expect = 5.8 Identities = 58/68 (85%), Gaps = 2/68 (2%) Strand = Plus / Plus Query: 366 catcaaggccgccctggag-cgcgagtgcccgggcaccgtctcctgcgcggacctcctgg 424 |||||||| |||||| ||| |||| |||||| ||| |||||||||||| ||| |||| | Sbjct: 315 catcaaggacgccctcgagtcgcg-gtgccccggcgtcgtctcctgcgccgacgtcctcg 373 Query: 425 ccctcgcc 432 |||||||| Sbjct: 374 ccctcgcc 381
>tpe|BN000584.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx55 gene for class III peroxidase 55 precursor, exon 1 Length = 1008 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 391 tgcccgggcaccgtctcctgcgcggacctcct 422 |||||||| |||||||||||||| ||| |||| Sbjct: 373 tgcccggggaccgtctcctgcgccgacatcct 404
>tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx13 gene for class III peroxidase 13 precursor, exons 1-3 Length = 9315 Score = 40.1 bits (20), Expect = 5.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 369 caaggccgccctggagcgcgagtgcccgggcaccgtctcctgcgcggacctcctggccct 428 |||||||||| | ||| || ||||||| ||||||||||||| || ||| |||| ||| | Sbjct: 8472 caaggccgccgtcgaggccgcgtgcccgagcaccgtctcctgtgccgacatcctcgcctt 8531 Query: 429 cgcc 432 |||| Sbjct: 8532 cgcc 8535
>tpe|BN000541.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx12 gene for class III peroxidase 12 precursor, exons 1-3 Length = 3928 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gtgcccgggcaccgtctcctgcgc 413 ||||||| |||||||||||||||| Sbjct: 3130 gtgcccgcgcaccgtctcctgcgc 3153
>gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18 of 83 of the complete sequence Length = 319287 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 caagtacgtgggcgccatca 370 |||||||||||||||||||| Sbjct: 39562 caagtacgtgggcgccatca 39543
>gb|AC130693.15| Mus musculus chromosome 19, clone RP23-385G14, complete sequence Length = 184943 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 24747 cgccatcaaggccgccctgg 24766
>emb|BX470216.11| Mouse DNA sequence from clone RP23-390M8 on chromosome 4, complete sequence Length = 162454 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcctggagaccgacgccgcc 297 |||||||||||||||||||| Sbjct: 135599 tcctggagaccgacgccgcc 135618
>gb|BC028800.1| Mus musculus NifU-like N-terminal domain containing, mRNA (cDNA clone IMAGE:1346920), partial cds Length = 879 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 429 cgccatcaaggccgccctgg 448
>gb|AC005750.1|AC005750 Drosophila melanogaster DNA sequence (P1s DS03979 (D283) and DS01272 (D284)), complete sequence Length = 102516 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 caagtacgtgggcgccatca 370 |||||||||||||||||||| Sbjct: 24711 caagtacgtgggcgccatca 24730
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 391 tgcccgggcaccgtctcctgcgcggacctcct 422 |||||||| |||||||||||||| ||| |||| Sbjct: 49520 tgcccggggaccgtctcctgcgccgacatcct 49489
>gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, complete sequence Length = 217336 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 agatgggtctgagctcaagcctgg 43 |||||||||||| ||||||||||| Sbjct: 131966 agatgggtctgatctcaagcctgg 131989
>gb|AC132939.23| Mus musculus chromosome 5, clone RP24-91I11, complete sequence Length = 224918 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 cgccatcaaggccgccctgg 382 |||||||||||||||||||| Sbjct: 38269 cgccatcaaggccgccctgg 38250
>gb|AC151931.2| Phaeodactylum tricornutum clone JGIAHOK-9H5, complete sequence Length = 35295 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 tcaaggccgccctggagcgc 387 |||||||||||||||||||| Sbjct: 13970 tcaaggccgccctggagcgc 13989
>emb|AL627314.6| Mouse DNA sequence from clone RP23-354H24 on chromosome 4, complete sequence Length = 196461 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 tgtcgtggctccgggccctcttcc 241 |||||||||||||| ||||||||| Sbjct: 187779 tgtcgtggctccggaccctcttcc 187756
>emb|X69700.1|DMMSP300 D.melanogaster MSP-300 mRNA Length = 3945 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 caagtacgtgggcgccatca 370 |||||||||||||||||||| Sbjct: 3513 caagtacgtgggcgccatca 3494
>gb|AF521598.1| Drosophila melanogaster MSP-300/nesprin splice variant mRNA, partial cds Length = 1202 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 caagtacgtgggcgccatca 370 |||||||||||||||||||| Sbjct: 707 caagtacgtgggcgccatca 688 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,193,964 Number of Sequences: 3902068 Number of extensions: 3193964 Number of successful extensions: 66026 Number of sequences better than 10.0: 157 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 65006 Number of HSP's gapped (non-prelim): 1022 length of query: 432 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 410 effective length of database: 17,147,199,772 effective search space: 7030351906520 effective search space used: 7030351906520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
