ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet115g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin ... 76 6e-14
2VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin ... 74 2e-13
3VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Vol... 73 5e-13
4VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein... 72 8e-13
5VDAC_PEA (P42054) Outer plastidial membrane protein porin (Volta... 69 7e-12
6VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein... 66 6e-11
7VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin ... 65 1e-10
8VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin ... 58 1e-08
9CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel al... 30 4.5

>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score = 75.9 bits (185), Expect = 6e-14
 Identities = 43/108 (39%), Positives = 53/108 (49%)
 Frame = +1

Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312
           G GLY+ IGKKA+DLL RDY                       KK +  + ++Q+Q+K K
Sbjct: 3   GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNK 62

Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456
           N TVDVKA             +L  PGLK +LS   P QKS  GK EL
Sbjct: 63  NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKS--GKVEL 108



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>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 273

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 45/108 (41%), Positives = 53/108 (49%)
 Frame = +1

Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312
           G GLY +IGKKARDLL RDY                       KK + I  ++Q+Q+K K
Sbjct: 2   GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNK 61

Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456
           N TVDVKA             EL  PGLK +LS   P Q+S  GK EL
Sbjct: 62  NITVDVKANSDSNVVTTVTVDEL-TPGLKSILSFAVPDQRS--GKFEL 106



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>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 277

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 41/106 (38%), Positives = 51/106 (48%)
 Frame = +1

Query: 136 LGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKN 315
           +GLY DIGKK RDLL +DY                       +KNE+I  +L TQ+K K 
Sbjct: 5   VGLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKK 64

Query: 316 FTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAE 453
            TVDVKA             E   PGLK +++L  P Q+S  GK E
Sbjct: 65  LTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRS--GKLE 108



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>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 36)
          Length = 275

 Score = 72.0 bits (175), Expect = 8e-13
 Identities = 45/108 (41%), Positives = 50/108 (46%)
 Frame = +1

Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312
           G GLY+DIGKKARDLL RDY                       KK E  L+D+ TQ+K K
Sbjct: 3   GPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNK 62

Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456
           N T DVK              E   PGLK + S   P QKS  GK EL
Sbjct: 63  NITTDVKVDTNSNVYTTITVDEPA-PGLKTIFSFVVPDQKS--GKVEL 107



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>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 275

 Score = 68.9 bits (167), Expect = 7e-12
 Identities = 42/108 (38%), Positives = 48/108 (44%)
 Frame = +1

Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312
           G GLY DIGKKARDLL +DY                       KK E  L D+ TQ+K K
Sbjct: 3   GPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNK 62

Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456
           N T D+K              E   PG+K +LS   P Q  T GK EL
Sbjct: 63  NITTDIKVDTNSNLFTTITVNEPA-PGVKAILSFKVPEQ--TSGKVEL 107



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>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 34)
          Length = 275

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 40/108 (37%), Positives = 50/108 (46%)
 Frame = +1

Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312
           G GLY +IGKKARDLL +DY                       KK +  L+D+ TQ+K K
Sbjct: 3   GPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNK 62

Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456
           N T D+K              E   PGLK +LS   P Q+S  GK E+
Sbjct: 63  NVTTDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVPDQRS--GKLEV 107



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>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 273

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 41/108 (37%), Positives = 46/108 (42%)
 Frame = +1

Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312
           G GLY +IGKKARDLL RDY                        K    L D+ TQVK  
Sbjct: 3   GPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNN 62

Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456
           NFT DVK              E   PGLK ++    P  KS  GKAE+
Sbjct: 63  NFTADVKVSTDSSLLTTLTFDEPA-PGLKVIVQAKLPDHKS--GKAEV 107



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>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1|
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 275

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 36/108 (33%), Positives = 46/108 (42%)
 Frame = +1

Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312
           G GLY +IGKKARDLL +D+                       KK + +L D+  Q + K
Sbjct: 3   GPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRK 62

Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456
           N T D+K              E   PGL+ + S   P Q S  GK EL
Sbjct: 63  NITTDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVPDQNS--GKVEL 107



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>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.2)
           (Low-voltage-activated calcium channel alpha1 3.2
           subunit)
          Length = 2353

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = +3

Query: 165 GQRSPQQGLHHGPEVHL-YHHRRQRSHNY*FKHKEK*SYLERP-PDPG 302
           G R  + G H     HL YHH     H+Y F H        RP P+PG
Sbjct: 501 GHRQRRAGRHTASVHHLVYHHHHHHHHHYHFSHGSP----RRPGPEPG 544


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.137    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,116,325
Number of Sequences: 219361
Number of extensions: 714258
Number of successful extensions: 1895
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1866
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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