| Clone Name | baet115g01 |
|---|---|
| Clone Library Name | barley_pub |
>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 275 Score = 75.9 bits (185), Expect = 6e-14 Identities = 43/108 (39%), Positives = 53/108 (49%) Frame = +1 Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312 G GLY+ IGKKA+DLL RDY KK + + ++Q+Q+K K Sbjct: 3 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNK 62 Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456 N TVDVKA +L PGLK +LS P QKS GK EL Sbjct: 63 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKS--GKVEL 108
>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) Length = 273 Score = 73.9 bits (180), Expect = 2e-13 Identities = 45/108 (41%), Positives = 53/108 (49%) Frame = +1 Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312 G GLY +IGKKARDLL RDY KK + I ++Q+Q+K K Sbjct: 2 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNK 61 Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456 N TVDVKA EL PGLK +LS P Q+S GK EL Sbjct: 62 NITVDVKANSDSNVVTTVTVDEL-TPGLKSILSFAVPDQRS--GKFEL 106
>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 277 Score = 72.8 bits (177), Expect = 5e-13 Identities = 41/106 (38%), Positives = 51/106 (48%) Frame = +1 Query: 136 LGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIKN 315 +GLY DIGKK RDLL +DY +KNE+I +L TQ+K K Sbjct: 5 VGLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKK 64 Query: 316 FTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAE 453 TVDVKA E PGLK +++L P Q+S GK E Sbjct: 65 LTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRS--GKLE 108
>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 36) Length = 275 Score = 72.0 bits (175), Expect = 8e-13 Identities = 45/108 (41%), Positives = 50/108 (46%) Frame = +1 Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312 G GLY+DIGKKARDLL RDY KK E L+D+ TQ+K K Sbjct: 3 GPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNK 62 Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456 N T DVK E PGLK + S P QKS GK EL Sbjct: 63 NITTDVKVDTNSNVYTTITVDEPA-PGLKTIFSFVVPDQKS--GKVEL 107
>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent| anion-selective channel protein) (VDAC) Length = 275 Score = 68.9 bits (167), Expect = 7e-12 Identities = 42/108 (38%), Positives = 48/108 (44%) Frame = +1 Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312 G GLY DIGKKARDLL +DY KK E L D+ TQ+K K Sbjct: 3 GPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNK 62 Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456 N T D+K E PG+K +LS P Q T GK EL Sbjct: 63 NITTDIKVDTNSNLFTTITVNEPA-PGVKAILSFKVPEQ--TSGKVEL 107
>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin| (Voltage-dependent anion-selective channel protein) (VDAC) (POM 34) Length = 275 Score = 65.9 bits (159), Expect = 6e-11 Identities = 40/108 (37%), Positives = 50/108 (46%) Frame = +1 Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312 G GLY +IGKKARDLL +DY KK + L+D+ TQ+K K Sbjct: 3 GPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNK 62 Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456 N T D+K E PGLK +LS P Q+S GK E+ Sbjct: 63 NVTTDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVPDQRS--GKLEV 107
>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2| (Voltage-dependent anion-selective channel protein 2) (VDAC 2) Length = 273 Score = 65.1 bits (157), Expect = 1e-10 Identities = 41/108 (37%), Positives = 46/108 (42%) Frame = +1 Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312 G GLY +IGKKARDLL RDY K L D+ TQVK Sbjct: 3 GPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNN 62 Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456 NFT DVK E PGLK ++ P KS GKAE+ Sbjct: 63 NFTADVKVSTDSSLLTTLTFDEPA-PGLKVIVQAKLPDHKS--GKAEV 107
>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1| (Voltage-dependent anion-selective channel protein 1) (VDAC 1) Length = 275 Score = 58.2 bits (139), Expect = 1e-08 Identities = 36/108 (33%), Positives = 46/108 (42%) Frame = +1 Query: 133 GLGLYADIGKKARDLLNRDYXXXXXXXXXXXXXXXXXXXXXXXKKNEAILSDLQTQVKIK 312 G GLY +IGKKARDLL +D+ KK + +L D+ Q + K Sbjct: 3 GPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRK 62 Query: 313 NFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFPYQKSTPGKAEL 456 N T D+K E PGL+ + S P Q S GK EL Sbjct: 63 NITTDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVPDQNS--GKVEL 107
>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) (Low-voltage-activated calcium channel alpha1 3.2 subunit) Length = 2353 Score = 29.6 bits (65), Expect = 4.5 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = +3 Query: 165 GQRSPQQGLHHGPEVHL-YHHRRQRSHNY*FKHKEK*SYLERP-PDPG 302 G R + G H HL YHH H+Y F H RP P+PG Sbjct: 501 GHRQRRAGRHTASVHHLVYHHHHHHHHHYHFSHGSP----RRPGPEPG 544 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.137 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,116,325 Number of Sequences: 219361 Number of extensions: 714258 Number of successful extensions: 1895 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1763 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1866 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)