ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet115e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLSC_NEIMA (Q9JU41) 1-acyl-sn-glycerol-3-phosphate acyltransfera... 31 1.4
2PLSC_NEIGO (Q59601) 1-acyl-sn-glycerol-3-phosphate acyltransfera... 31 1.4
3PLSC_NEIMB (Q9JZ47) 1-acyl-sn-glycerol-3-phosphate acyltransfera... 31 1.8

>PLSC_NEIMA (Q9JU41) 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC|
           2.3.1.51) (1-AGP acyltransferase) (1-AGPAT)
           (Lysophosphatidic acid acyltransferase) (LPAAT)
          Length = 255

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 293 TAKETARPPYTSLGLPRRPTRAYALRSISFSVS-VTITDAA 174
           T K TARP Y  +GLP    R  +++ ++  V  V + DAA
Sbjct: 187 TGKRTARPSYADVGLPTCLWRIVSMKKLTIKVDFVCVADAA 227



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>PLSC_NEIGO (Q59601) 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC|
           2.3.1.51) (1-AGP acyltransferase) (1-AGPAT)
           (Lysophosphatidic acid acyltransferase) (LPAAT)
          Length = 255

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 293 TAKETARPPYTSLGLPRRPTRAYALRSISFSVS-VTITDAA 174
           T K TARP Y  +GLP    R  +++ ++  V  V + DAA
Sbjct: 187 TGKRTARPSYADVGLPTCLWRIVSMKKLTIKVDFVCVADAA 227



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>PLSC_NEIMB (Q9JZ47) 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC|
           2.3.1.51) (1-AGP acyltransferase) (1-AGPAT)
           (Lysophosphatidic acid acyltransferase) (LPAAT)
          Length = 255

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 293 TAKETARPPYTSLGLPRRPTRAYALRSISFSVS-VTITDAA 174
           T K TARP Y  +GLP    R  +++ ++  V  V + DAA
Sbjct: 187 TGKRTARPSYADVGLPTCLWRIVSMKKLTIRVDFVCVADAA 227


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,291,022
Number of Sequences: 219361
Number of extensions: 534091
Number of successful extensions: 1798
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1798
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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