ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet115d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 259 3e-69
2CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 222 5e-58
3CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast... 220 1e-57
4CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 218 5e-57
5CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 217 1e-56
6CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 216 2e-56
7CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 212 4e-55
8CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 211 6e-55
9CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 211 1e-54
10CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 210 2e-54
11CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 189 2e-48
12CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 187 2e-47
13CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 186 3e-47
14CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 183 2e-46
15CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 183 2e-46
16CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 182 4e-46
17CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 182 5e-46
18CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 181 7e-46
19CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 181 7e-46
20CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 181 9e-46
21CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 181 9e-46
22CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 181 9e-46
23CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 181 1e-45
24CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 180 2e-45
25CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 180 2e-45
26CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 179 3e-45
27CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 179 3e-45
28CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 179 3e-45
29CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 179 4e-45
30CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 178 7e-45
31CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 178 7e-45
32CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 178 7e-45
33CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 178 7e-45
34CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 177 1e-44
35CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 177 1e-44
36CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 177 1e-44
37CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 177 2e-44
38CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 176 3e-44
39CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 176 4e-44
40CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 175 5e-44
41CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 175 6e-44
42CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 174 1e-43
43CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 173 2e-43
44CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 173 2e-43
45CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 172 4e-43
46CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 172 4e-43
47CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 171 7e-43
48CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 159 3e-39
49CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 158 6e-39
50CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 157 2e-38
51CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla... 151 1e-36
52CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 149 4e-36
53CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 148 6e-36
54CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 148 6e-36
55CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type... 140 2e-33
56CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop... 137 1e-32
57CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type... 105 8e-23
58CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 93 4e-19
59CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast... 75 7e-14
60CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 75 7e-14
61LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre... 67 2e-11
62CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla... 62 8e-10
63LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 62 1e-09
64CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 59 5e-09
65CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 58 1e-08
66CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop... 57 3e-08
67CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch... 56 4e-08
68CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch... 53 4e-07
69FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ... 40 0.003
70CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo... 39 0.009
71CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 membe... 37 0.021
72CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29 36 0.060
73CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo... 36 0.060
74CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo... 36 0.060
75TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-li... 33 0.51
76FTSZ_AGRTU (O30992) Cell division protein ftsZ 32 0.66
77GALT_ENTFA (Q836N8) Galactose-1-phosphate uridylyltransferase (E... 32 0.66
78NEUV_RANES (P11858) Vasotocin-neurophysin VT precursor (VT) [Con... 31 1.5
79FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein ... 30 2.5
80NEUV_BUFJA (P08163) Vasotocin-neurophysin VT precursor (VT) [Con... 30 2.5
81TP53B_MOUSE (P70399) Tumor suppressor p53-binding protein 1 (p53... 30 3.3
82SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2 30 3.3
83FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein ... 30 3.3
84FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein ... 30 3.3
85CI150_RAT (Q5BJW5) Protein C9orf150 homolog 30 3.3
86CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fr... 30 3.3
87FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein ... 30 3.3
88MCPH1_HUMAN (Q8NEM0) Microcephalin 30 4.3
89SMG_DROME (Q23972) Protein Smaug 30 4.3
90L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chlor... 30 4.3
91THIE_NEIG1 (Q5F5C2) Thiamine-phosphate pyrophosphorylase (EC 2.5... 29 5.6
92GNTP_ECOLI (P0AC94) High-affinity gluconate transporter (Glucona... 29 5.6
93GNTP_ECO57 (P0AC95) High-affinity gluconate transporter (Glucona... 29 5.6
94ACK2_BOVIN (O02742) Activated CDC42 kinase 2 (EC 2.7.10.2) (ACK-2) 29 5.6
95YAIC_ECOLI (P0AAP1) Hypothetical protein yaiC 29 7.3
96YAIC_ECOL6 (P0AAP2) Hypothetical protein yaiC 29 7.3
97MCPH1_MACFA (Q5IFK1) Microcephalin 29 7.3
98YM67_YEAST (Q03661) Hypothetical 187.1 kDa protein in GUA1-ERG8 ... 29 7.3
99RNC_SYMTH (Q67PF5) Ribonuclease III (EC 3.1.26.3) (RNase III) 29 7.3
100MCPH1_PANTR (P61593) Microcephalin 28 9.6
101FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein ... 28 9.6
102PACA_HUMAN (P18509) Pituitary adenylate cyclase-activating polyp... 28 9.6
103MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (L... 28 9.6
104KKCC2_RAT (O88831) Calcium/calmodulin-dependent protein kinase k... 28 9.6 
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  259 bits (661), Expect = 3e-69
 Identities = 121/126 (96%), Positives = 124/126 (98%)
 Frame = +3

Query: 90  LHQTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 269
           LHQTTSFLGTAPRRD+LVR VGD GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS
Sbjct: 6   LHQTTSFLGTAPRRDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 65

Query: 270 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGE 449
           YLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNG+KFGE
Sbjct: 66  YLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGE 125

Query: 450 AVWFKA 467
           AVWFKA
Sbjct: 126 AVWFKA 131



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +3

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 434
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     I++  G
Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
to top
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  222 bits (565), Expect = 5e-58
 Identities = 106/127 (83%), Positives = 116/127 (91%), Gaps = 3/127 (2%)
 Frame = +3

Query: 96  QTTSFLGTA--PRRDDLVRSVGDFG-GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 266
           Q ++F+G A    +++ +R VG+FG GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTP
Sbjct: 7   QQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTP 66

Query: 267 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFG 446
           SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNG+KFG
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFG 126

Query: 447 EAVWFKA 467
           EAVWFKA
Sbjct: 127 EAVWFKA 133
to top
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  220 bits (561), Expect = 1e-57
 Identities = 99/113 (87%), Positives = 109/113 (96%)
 Frame = +3

Query: 129 RDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 308
           +++LVR VG  GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD
Sbjct: 20  QNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 309 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNG+KFGEAVWFKA
Sbjct: 80  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKA 132
to top
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  218 bits (556), Expect = 5e-57
 Identities = 102/114 (89%), Positives = 108/114 (94%), Gaps = 1/114 (0%)
 Frame = +3

Query: 129 RDDLVRSVGDF-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGW 305
           +++LVR +G F GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGW
Sbjct: 20  QNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGW 79

Query: 306 DTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           DTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNG+KFGEAVWFKA
Sbjct: 80  DTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 133
to top
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  217 bits (552), Expect = 1e-56
 Identities = 101/126 (80%), Positives = 113/126 (89%), Gaps = 2/126 (1%)
 Frame = +3

Query: 96  QTTSFLGTAP--RRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPS 269
           Q+++F G     +RD+LVR VG   GR +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPS
Sbjct: 7   QSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPS 66

Query: 270 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGE 449
           YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+FPE+LSKNG++FGE
Sbjct: 67  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGE 126

Query: 450 AVWFKA 467
           AVWFKA
Sbjct: 127 AVWFKA 132
to top
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  216 bits (551), Expect = 2e-56
 Identities = 104/127 (81%), Positives = 112/127 (88%), Gaps = 3/127 (2%)
 Frame = +3

Query: 96  QTTSFLGTAPRR--DDLVRSVGDFGG-RITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 266
           Q ++F G    +  ++LVR +G FGG R TMRRTVKSAPQSIWYG DRPKYLGPFSEQTP
Sbjct: 7   QQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTP 66

Query: 267 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFG 446
           SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNG+ FG
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFG 126

Query: 447 EAVWFKA 467
           EAVWFKA
Sbjct: 127 EAVWFKA 133
to top
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  212 bits (540), Expect = 4e-55
 Identities = 99/127 (77%), Positives = 112/127 (88%), Gaps = 3/127 (2%)
 Frame = +3

Query: 96  QTTSFLGTA---PRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 266
           Q++S  G     P++++LV+ VG    RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TP
Sbjct: 8   QSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTP 67

Query: 267 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFG 446
           SYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNG+KFG
Sbjct: 68  SYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFG 127

Query: 447 EAVWFKA 467
           EAVWFKA
Sbjct: 128 EAVWFKA 134
to top
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  211 bits (538), Expect = 6e-55
 Identities = 100/127 (78%), Positives = 110/127 (86%), Gaps = 3/127 (2%)
 Frame = +3

Query: 96  QTTSFLGTAPRR--DDLVRSVGDFG-GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 266
           Q ++F G    R  ++ +R  G+FG  R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ P
Sbjct: 7   QQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIP 66

Query: 267 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFG 446
           SYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+L KNG+KFG
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFG 126

Query: 447 EAVWFKA 467
           EAVWFKA
Sbjct: 127 EAVWFKA 133
to top
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  211 bits (536), Expect = 1e-54
 Identities = 101/127 (79%), Positives = 111/127 (87%), Gaps = 3/127 (2%)
 Frame = +3

Query: 96  QTTSFLGTAPRR--DDLVRSVGDFGG-RITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTP 266
           Q ++F G    +  ++LV  +G  GG R++MRRTVKSAP SIWYGPDRPKYLGPFS+Q P
Sbjct: 7   QQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIP 66

Query: 267 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFG 446
           SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEILSKNG+KFG
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFG 126

Query: 447 EAVWFKA 467
           EAVWFKA
Sbjct: 127 EAVWFKA 133
to top
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  210 bits (534), Expect = 2e-54
 Identities = 96/102 (94%), Positives = 99/102 (97%)
 Frame = +3

Query: 162 GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 341
           GGR+TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 4   GGRVTMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 63

Query: 342 AKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           A+NRELEVIH RWAMLGALGCVFPEILSKNG+ FGEAVWFKA
Sbjct: 64  ARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKA 105
to top
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  189 bits (481), Expect = 2e-48
 Identities = 92/111 (82%), Positives = 98/111 (88%), Gaps = 5/111 (4%)
 Frame = +3

Query: 150 VGDFG-GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTA 314
           VG FG GRITMR+TV     +A  S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTA
Sbjct: 20  VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTA 79

Query: 315 GLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           GLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NG+KFGEAVWFKA
Sbjct: 80  GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 130
to top
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  187 bits (474), Expect = 2e-47
 Identities = 92/123 (74%), Positives = 101/123 (82%), Gaps = 2/123 (1%)
 Frame = +3

Query: 105 SFLGTAPRRDDLVRSVGDFGGRITMRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLT 278
           SF G A +       +    GRITMR+ V KSAP S  WYGPDR KYLGPFS ++PSYLT
Sbjct: 12  SFAGQAVKLSPSASEISG-NGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLT 70

Query: 279 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVW 458
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVW 130

Query: 459 FKA 467
           FKA
Sbjct: 131 FKA 133
to top
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  186 bits (472), Expect = 3e-47
 Identities = 85/102 (83%), Positives = 94/102 (92%), Gaps = 1/102 (0%)
 Frame = +3

Query: 165 GRITMRRTVKS-APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 341
           GR++MR+TVK+    S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 31  GRVSMRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF 90

Query: 342 AKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           AKNRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 91  AKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 132
to top
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  183 bits (465), Expect = 2e-46
 Identities = 85/103 (82%), Positives = 93/103 (90%), Gaps = 2/103 (1%)
 Frame = +3

Query: 165 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 338
           GR++MR+TV    +  S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 29  GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 88

Query: 339 FAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           FAKNRELEVIHSRWAMLGALGCVFPE+LS+NG+KFGEAVWFKA
Sbjct: 89  FAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 131
to top
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  183 bits (464), Expect = 2e-46
 Identities = 84/103 (81%), Positives = 93/103 (90%), Gaps = 2/103 (1%)
 Frame = +3

Query: 165 GRITMRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 338
           GR++MR+TV    A  S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 31  GRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET 90

Query: 339 FAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           FAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 91  FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 133
to top
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  182 bits (462), Expect = 4e-46
 Identities = 84/105 (80%), Positives = 93/105 (88%), Gaps = 4/105 (3%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           G++TMR+TV  A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135
to top
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  182 bits (461), Expect = 5e-46
 Identities = 84/105 (80%), Positives = 92/105 (87%), Gaps = 4/105 (3%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           GR+TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135
to top
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  181 bits (460), Expect = 7e-46
 Identities = 84/104 (80%), Positives = 93/104 (89%), Gaps = 3/104 (2%)
 Frame = +3

Query: 165 GRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 335
           GR+TMR+TV   K    S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 31  GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 90

Query: 336 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           TFA+NRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 91  TFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 134
to top
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  181 bits (460), Expect = 7e-46
 Identities = 84/104 (80%), Positives = 93/104 (89%), Gaps = 3/104 (2%)
 Frame = +3

Query: 165 GRITMRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 335
           GR+TMR+TV   K    S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 31  GRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 90

Query: 336 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           TFA+NRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 91  TFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 134
to top
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  181 bits (459), Expect = 9e-46
 Identities = 83/105 (79%), Positives = 92/105 (87%), Gaps = 4/105 (3%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           G++TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135
to top
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  181 bits (459), Expect = 9e-46
 Identities = 83/105 (79%), Positives = 92/105 (87%), Gaps = 4/105 (3%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           G++TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 30  GKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 89

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 90  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 134
to top
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  181 bits (459), Expect = 9e-46
 Identities = 83/105 (79%), Positives = 92/105 (87%), Gaps = 4/105 (3%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           G++TMR+T   A      S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 30  GKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 89

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 90  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 134
to top
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  181 bits (458), Expect = 1e-45
 Identities = 84/106 (79%), Positives = 94/106 (88%), Gaps = 5/106 (4%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 329
           GRITMR+T    P+++     WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31  GRITMRKTA-GKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSAD 89

Query: 330 PETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           PETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 90  PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135
to top
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  180 bits (456), Expect = 2e-45
 Identities = 83/106 (78%), Positives = 93/106 (87%), Gaps = 4/106 (3%)
 Frame = +3

Query: 162 GGRITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 329
           G R TMR++  +    +  S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSAD
Sbjct: 31  GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSAD 90

Query: 330 PETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           PETF+KNRELEVIHSRWAMLGALGCVFPE+LS+NG+KFGEAVWFKA
Sbjct: 91  PETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 136
to top
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  180 bits (456), Expect = 2e-45
 Identities = 88/127 (69%), Positives = 99/127 (77%), Gaps = 4/127 (3%)
 Frame = +3

Query: 99  TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTP 266
           ++SF G A       +  G+  G+ TMR+TV  A      S WYGPDR KYLGPFS + P
Sbjct: 10  SSSFAGKAVNVPSSSQITGN--GKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAP 67

Query: 267 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFG 446
           SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ ++NG+KFG
Sbjct: 68  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG 127

Query: 447 EAVWFKA 467
           EAVWFKA
Sbjct: 128 EAVWFKA 134
to top
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  179 bits (455), Expect = 3e-45
 Identities = 83/102 (81%), Positives = 90/102 (88%), Gaps = 2/102 (1%)
 Frame = +3

Query: 168 RITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 341
           + TMR+T   +  S   WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 22  KFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 81

Query: 342 AKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           AKNRELEVIHSRWAMLGALGCVFPE+LS+NG+KFGEAVWFKA
Sbjct: 82  AKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 123
to top
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  179 bits (455), Expect = 3e-45
 Identities = 84/103 (81%), Positives = 93/103 (90%), Gaps = 2/103 (1%)
 Frame = +3

Query: 165 GRITMRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 338
           GR+TMR+TVK + P  S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 31  GRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 90

Query: 339 FAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           FA+NRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 91  FARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 133
to top
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  179 bits (454), Expect = 3e-45
 Identities = 87/127 (68%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
 Frame = +3

Query: 99  TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTP 266
           ++SF G A +       +    G++TMR+TV  A      S WYGPDR KYLGPFS + P
Sbjct: 10  SSSFAGKAVKLSSSSSEITG-NGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAP 68

Query: 267 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFG 446
           SYLTGEFP DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ ++NGIKFG
Sbjct: 69  SYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFG 128

Query: 447 EAVWFKA 467
           EAVWFKA
Sbjct: 129 EAVWFKA 135
to top
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  179 bits (453), Expect = 4e-45
 Identities = 82/103 (79%), Positives = 90/103 (87%), Gaps = 2/103 (1%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 338
           GR++MR+T      S   WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 11  GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 70

Query: 339 FAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           FAKNRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEA WFKA
Sbjct: 71  FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKA 113
to top
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  178 bits (451), Expect = 7e-45
 Identities = 83/105 (79%), Positives = 90/105 (85%), Gaps = 4/105 (3%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           G+  MR+TV  A      S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADP 90

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135
to top
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  178 bits (451), Expect = 7e-45
 Identities = 81/104 (77%), Positives = 91/104 (87%), Gaps = 4/104 (3%)
 Frame = +3

Query: 165 GRITMRRTVKSAP----QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           G++TMR+T   A      S WYGP+R KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 90

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFK 464
           ETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFK
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134
to top
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  178 bits (451), Expect = 7e-45
 Identities = 88/121 (72%), Positives = 98/121 (80%), Gaps = 6/121 (4%)
 Frame = +3

Query: 123 PRRDDLVRSVGDFG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGE 284
           P+ + L+   G  G  R+TMR+    KS   SI   WYGPDR  YLGPFS + PSYLTGE
Sbjct: 26  PQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGE 85

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFK 464
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFK
Sbjct: 86  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 145

Query: 465 A 467
           A
Sbjct: 146 A 146
to top
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  178 bits (451), Expect = 7e-45
 Identities = 85/113 (75%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
 Frame = +3

Query: 132 DDLVRSVGDFGGRITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 308
           ++L R VG    R+ M      AP  SIWYG DRP YLGPFS   PSYL+GEFPGDYGWD
Sbjct: 21  NELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWD 80

Query: 309 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           TAGLSADPETFAKNRELEVIHSRWAMLGALGCV PE+L+KNG+KFGEAVWFKA
Sbjct: 81  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKA 133
to top
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  177 bits (450), Expect = 1e-44
 Identities = 88/121 (72%), Positives = 98/121 (80%), Gaps = 6/121 (4%)
 Frame = +3

Query: 123 PRRDDLVRSVGDFG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGE 284
           P+ + L+   G  G  R+TMR+    KS   SI   WYGPDR  YLGPFS + PSYLTGE
Sbjct: 26  PQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGE 85

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFK 464
           FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFK
Sbjct: 86  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 145

Query: 465 A 467
           A
Sbjct: 146 A 146
to top
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  177 bits (450), Expect = 1e-44
 Identities = 82/104 (78%), Positives = 92/104 (88%), Gaps = 4/104 (3%)
 Frame = +3

Query: 168 RITMRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 335
           R TMR++  +    +  S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 34  RFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 93

Query: 336 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           TF+KNRELEVIHSRWAMLGALGCVFPE+LS+NG+KFGEAVWFKA
Sbjct: 94  TFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 137
to top
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  177 bits (449), Expect = 1e-44
 Identities = 83/105 (79%), Positives = 90/105 (85%), Gaps = 4/105 (3%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           G+ TMR+TV  A      S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTA LSADP
Sbjct: 31  GKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADP 90

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135
to top
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  177 bits (448), Expect = 2e-44
 Identities = 86/130 (66%), Positives = 100/130 (76%), Gaps = 7/130 (5%)
 Frame = +3

Query: 99  TTSFLGTA---PRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSE 257
           ++SF G A   P   ++ R+     G++TMR+TV  A      S WYGPDR KYLGPFS 
Sbjct: 10  SSSFAGKAVNVPSSSEITRN-----GKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSG 64

Query: 258 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGI 437
           + PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIH RW MLGALGCVFPE+ ++NG+
Sbjct: 65  EAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGV 124

Query: 438 KFGEAVWFKA 467
           KFGEAVWFKA
Sbjct: 125 KFGEAVWFKA 134
to top
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  176 bits (446), Expect = 3e-44
 Identities = 80/100 (80%), Positives = 90/100 (90%), Gaps = 1/100 (1%)
 Frame = +3

Query: 168 RITMRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 344
           R++MR+T  +    S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 32  RVSMRKTAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 91

Query: 345 KNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFK 464
           KNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFK
Sbjct: 92  KNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFK 131
to top
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  176 bits (445), Expect = 4e-44
 Identities = 83/115 (72%), Positives = 98/115 (85%), Gaps = 3/115 (2%)
 Frame = +3

Query: 132 DDLVRSV-GDFGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYG 302
           ++L R V G+   R+TMRRTV  +  S  IWYG DRPK+LGPFS +TPSYL GEF GDYG
Sbjct: 22  NELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYG 81

Query: 303 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           WDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+ PE+L+K+G+KFGEAVWFKA
Sbjct: 82  WDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKA 136



 Score = 34.3 bits (77), Expect = 0.17
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +3

Query: 243 GPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEI 419
           GP  E T P Y  G F      D  GL+ DP+TFA+ +  E+ + R AM    G     I
Sbjct: 182 GPLGEVTDPIYPGGSF------DPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAI 235

Query: 420 LSKNG 434
           ++  G
Sbjct: 236 VTGKG 240
to top
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  175 bits (444), Expect = 5e-44
 Identities = 82/105 (78%), Positives = 89/105 (84%), Gaps = 5/105 (4%)
 Frame = +3

Query: 168 RITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           R+TMR+T   A       S WYGPDR  YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29  RVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 89  ETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 133
to top
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  175 bits (443), Expect = 6e-44
 Identities = 81/105 (77%), Positives = 88/105 (83%), Gaps = 4/105 (3%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           G+ TMR+T   A      S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 31  GKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADP 90

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIH RWAMLGALGCVFPE+ ++NG+KFGEAVW KA
Sbjct: 91  ETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKA 135
to top
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  174 bits (440), Expect = 1e-43
 Identities = 82/105 (78%), Positives = 90/105 (85%), Gaps = 4/105 (3%)
 Frame = +3

Query: 165 GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           GRITMR++      +A  S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 25  GRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 84

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 85  ETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 129
to top
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  173 bits (439), Expect = 2e-43
 Identities = 81/105 (77%), Positives = 88/105 (83%), Gaps = 5/105 (4%)
 Frame = +3

Query: 168 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           R+TMR+        SA  S WYGPDR  YLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 38  RVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 97

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           E FAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 98  ENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 142
to top
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  173 bits (439), Expect = 2e-43
 Identities = 81/105 (77%), Positives = 88/105 (83%), Gaps = 5/105 (4%)
 Frame = +3

Query: 168 RITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           R+TMR+T   A       S WYGPDR  YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29  RVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 133



 Score = 30.0 bits (66), Expect = 3.3
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 243 GPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEI 419
           GP  E   P Y  G F      D  GL+ DPE F + +  E+   R AML   G     I
Sbjct: 179 GPLGEVVDPLYPGGSF------DPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAI 232

Query: 420 LSKNG 434
           ++  G
Sbjct: 233 VTGKG 237
to top
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  172 bits (436), Expect = 4e-43
 Identities = 85/127 (66%), Positives = 96/127 (75%), Gaps = 4/127 (3%)
 Frame = +3

Query: 99  TTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTP 266
           ++SF G A +       +GD   R+ MR+T   A Q    S WYG DR  YLGP S + P
Sbjct: 10  SSSFAGKAVKNLPSSALIGD--ARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPP 67

Query: 267 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFG 446
           SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NG+KFG
Sbjct: 68  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 127

Query: 447 EAVWFKA 467
           EA WFKA
Sbjct: 128 EAGWFKA 134
to top
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  172 bits (436), Expect = 4e-43
 Identities = 77/91 (84%), Positives = 85/91 (93%)
 Frame = +3

Query: 195 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 374
           ++  S W+GPD  KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS
Sbjct: 6   ASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 65

Query: 375 RWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           RWAMLGALGCVFPE+LS+NG+KFGEAVWFKA
Sbjct: 66  RWAMLGALGCVFPELLSRNGVKFGEAVWFKA 96
to top
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  171 bits (434), Expect = 7e-43
 Identities = 81/105 (77%), Positives = 89/105 (84%), Gaps = 5/105 (4%)
 Frame = +3

Query: 168 RITMRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           RITMR+T       ++  S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29  RITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 89  ETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 133
to top
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  159 bits (403), Expect = 3e-39
 Identities = 77/105 (73%), Positives = 83/105 (79%), Gaps = 4/105 (3%)
 Frame = +3

Query: 165 GRITMRRTV-KSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 332
           GRITMR+T  K  P    S WYG DR  YLGP S   PSYLTGEFPGDYGWDT GLSADP
Sbjct: 28  GRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADP 87

Query: 333 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           ETFAKNRELEVIH RWA+   LGCVFPE+L++NG+KFGE VWFKA
Sbjct: 88  ETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKA 132
to top
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  158 bits (400), Expect = 6e-39
 Identities = 76/102 (74%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 344
           GRITM          +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA
Sbjct: 41  GRITMGN-------DLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA 93

Query: 345 KNRELEVIHSRWAMLGALGCVFPEILSK-NGIKFGEAVWFKA 467
           +NR LEVIH RWAMLGALGCVFPE+L K  G++F E VWFKA
Sbjct: 94  RNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKA 135



 Score = 33.1 bits (74), Expect = 0.39
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 434
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G     I++  G
Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
to top
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  157 bits (396), Expect = 2e-38
 Identities = 79/125 (63%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
 Frame = +3

Query: 96  QTTSFLGTAPRRDDLVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYL 275
           + T FLG     + L   V     R TM          +WYGPDR KYLGPFS QTPSYL
Sbjct: 15  KATPFLGQTKNANPLRDVVAMGSARFTMSN-------DLWYGPDRVKYLGPFSAQTPSYL 67

Query: 276 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK-NGIKFGEA 452
            GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L K   + F E 
Sbjct: 68  NGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEP 127

Query: 453 VWFKA 467
           VWFKA
Sbjct: 128 VWFKA 132



 Score = 33.5 bits (75), Expect = 0.30
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 434
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G     I++  G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
to top
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  151 bits (381), Expect = 1e-36
 Identities = 75/106 (70%), Positives = 86/106 (81%), Gaps = 5/106 (4%)
 Frame = +3

Query: 165 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 329
           GR++MR+T   AP+++     WYGPDR KYLGPFS + PSYLTGEF G        LSAD
Sbjct: 30  GRVSMRKT---APKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSAD 78

Query: 330 PETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           PETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG+KFGEAVWFKA
Sbjct: 79  PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 124
to top
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  149 bits (376), Expect = 4e-36
 Identities = 67/74 (90%), Positives = 71/74 (95%)
 Frame = +3

Query: 246 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILS 425
           PFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS WAMLGALGCVFPE+LS
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60

Query: 426 KNGIKFGEAVWFKA 467
           +NG+KFGEAVWFKA
Sbjct: 61  RNGVKFGEAVWFKA 74
to top
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  148 bits (374), Expect = 6e-36
 Identities = 68/86 (79%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
 Frame = +3

Query: 213 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 392
           WYGPDR K+LGPFS  TP+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH+RWA+LG
Sbjct: 39  WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98

Query: 393 ALGCVFPEILSK-NGIKFGEAVWFKA 467
           ALG + PE+LS   G+KFGE VWFKA
Sbjct: 99  ALGILTPELLSTYAGVKFGEPVWFKA 124



 Score = 33.1 bits (74), Expect = 0.39
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 434
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM    G     I++  G
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
to top
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  148 bits (374), Expect = 6e-36
 Identities = 70/95 (73%), Positives = 83/95 (87%), Gaps = 4/95 (4%)
 Frame = +3

Query: 195 SAPQSI---WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 362
           +AP+S    +YGP+R K+LGP+SE  TP+YLTGEFPGDYGWDTAGLSADPETF + RELE
Sbjct: 27  AAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELE 86

Query: 363 VIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKA 467
           +IH+RWAMLGALGC  PE+L+K+G KFGEAVWFKA
Sbjct: 87  LIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKA 121



 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 434
           +PG+  +D  GL+ DP+TFA+ +  E+ + R A     G     I++  G
Sbjct: 177 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKG 225
to top
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  140 bits (353), Expect = 2e-33
 Identities = 67/104 (64%), Positives = 86/104 (82%), Gaps = 4/104 (3%)
 Frame = +3

Query: 168 RITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPET 338
           R T ++ + + P++   +YGPDR K+LGPFSE  TP YLTGEFPGDYGWDTAGLSADP+T
Sbjct: 16  RQTRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQT 75

Query: 339 FAKNRELEVIHSRWAMLGALGCVFPEILSK-NGIKFGEAVWFKA 467
           FA+ RE+E+IH+RWA+LGALG + PE+LS+  G++FGE VWFKA
Sbjct: 76  FARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKA 119



 Score = 32.7 bits (73), Expect = 0.51
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +3

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 434
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   LG     I++  G
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
to top
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  137 bits (346), Expect = 1e-32
 Identities = 66/80 (82%), Positives = 69/80 (86%)
 Frame = +3

Query: 228 RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 407
           R KYLGPFS + PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIHSR AM  ALGC+
Sbjct: 58  RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117

Query: 408 FPEILSKNGIKFGEAVWFKA 467
           FPE+LS  G  FGEAVWFKA
Sbjct: 118 FPELLSVMGQGFGEAVWFKA 137
to top
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score =  105 bits (261), Expect = 8e-23
 Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
 Frame = +3

Query: 195 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 374
           S+  + +YGPD          Q P   TGEFPGDYGWDTAGLSADPETF + RELE+IH+
Sbjct: 51  SSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHA 109

Query: 375 RWAMLGALGCVFPEILS-KNGIKFGE-AVWFKA 467
           R  +LGALG V PE+L+ ++GIKFG+ A+WFKA
Sbjct: 110 RCGLLGALGMVTPELLADEDGIKFGDAAIWFKA 142



 Score = 34.7 bits (78), Expect = 0.13
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = +3

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 434
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   LG     I++  G
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
to top
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 47/88 (53%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
 Frame = +3

Query: 213 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 383
           WYGPDR  +L        + P YL GE  GDYG+D  GL   PE FAK +  E+IH+RWA
Sbjct: 62  WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121

Query: 384 MLGALGCVFPEILSKNGIKFG-EAVWFK 464
           MLGA G + PE L+K G   G EAVWFK
Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVWFK 149
to top
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 36/85 (42%), Positives = 49/85 (57%)
 Frame = +3

Query: 222 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 401
           PDRP +        P +L G  PGD+G+D  GL +DPE+   N + E++HSRWAMLGA G
Sbjct: 63  PDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120

Query: 402 CVFPEILSKNGIKFGEAVWFKAARR 476
              PE L+K G+      W+ A  +
Sbjct: 121 IFIPEFLTKIGV-LNTPSWYTAGEQ 144
to top
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 36/85 (42%), Positives = 51/85 (60%)
 Frame = +3

Query: 222 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 401
           PDRP +        P +L G  PGD+G+D  GL++DPE+   N++ E++H RWAMLGA G
Sbjct: 63  PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG 120

Query: 402 CVFPEILSKNGIKFGEAVWFKAARR 476
              PE+L+K GI      W+ A  +
Sbjct: 121 IFIPELLTKIGI-LNTPSWYTAGEQ 144
to top
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 31/70 (44%), Positives = 44/70 (62%)
 Frame = +3

Query: 258 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGI 437
           + P+ LTGE+P D G+D   L+ADP+ +A+ R  EV H R AML  +GC+ PE+L     
Sbjct: 195 EPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL----- 249

Query: 438 KFGEAVWFKA 467
             G+  WF+A
Sbjct: 250 --GKGAWFEA 257



 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 32/72 (44%), Positives = 47/72 (65%)
 Frame = +3

Query: 264 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKF 443
           PS+L GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +G + P+ L       
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64

Query: 444 GEAVWFKAARRS 479
           G+ +W++AA+ +
Sbjct: 65  GKGIWYEAAQNA 76



 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 32/67 (47%), Positives = 41/67 (61%)
 Frame = +3

Query: 264 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKF 443
           P YLTGE  GD G+D AGL+ADP TF + +  EV H R +ML  +GC+ PE+L       
Sbjct: 381 PRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------- 433

Query: 444 GEAVWFK 464
           G   WF+
Sbjct: 434 GNGAWFQ 440
to top
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 62.0 bits (149), Expect = 8e-10
 Identities = 29/71 (40%), Positives = 41/71 (57%)
 Frame = +3

Query: 261 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIK 440
           +P YLTG   GD G+D  GL+ DPE      + E+++ RWAMLG  G + PE+ +K GI 
Sbjct: 63  SPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI- 121

Query: 441 FGEAVWFKAAR 473
                W+ A +
Sbjct: 122 INVPEWYDAGK 132
to top
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 28/69 (40%), Positives = 43/69 (62%)
 Frame = +3

Query: 258 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGI 437
           Q P++LTGE+P D G+D   ++ADP  +A+ R  EV H+R +ML  +G + PE+L     
Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 221

Query: 438 KFGEAVWFK 464
             G+  WF+
Sbjct: 222 --GKGAWFE 228



 Score = 37.7 bits (86), Expect = 0.016
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +3

Query: 330 PETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFK 464
           P  + + R  EV + R AML  +GCV+PE+L       G  VWF+
Sbjct: 1   PTVYERMRVAEVFNGRLAMLAIVGCVYPELL-------GNGVWFE 38
to top
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 30/68 (44%), Positives = 37/68 (54%)
 Frame = +3

Query: 264 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKF 443
           PSYL G  PGD+G+D+ GL   P    + +E E+IH RWAML   G + PE L       
Sbjct: 56  PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL------- 108

Query: 444 GEAVWFKA 467
           G   W KA
Sbjct: 109 GLGNWVKA 116
to top
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
 Frame = +3

Query: 252 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 413
           S+Q+ SYL G  PGD+G+D  GLS DPE    F + + L   EVI+ R+AMLGA G + P
Sbjct: 59  SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117

Query: 414 EILSKNGIKFGEA--VWFK 464
           EIL K G+   E    WF+
Sbjct: 118 EILGKAGLIPQETALAWFQ 136
to top
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 29/69 (42%), Positives = 36/69 (52%)
 Frame = +3

Query: 195 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 374
           +AP+  W     P   G  +   P +L G  PGD+G+D  GL  DP      RE E+IH 
Sbjct: 54  AAPKKSWI----PAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHG 109

Query: 375 RWAMLGALG 401
           RWAML  LG
Sbjct: 110 RWAMLAVLG 118
to top
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
 Frame = +3

Query: 162 GGRITMRR--TVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 335
           GG  T +R   + +A +  W     P   G  +   P +L G  PGDYG+D  GL  DP 
Sbjct: 36  GGAATPKRFTVLAAAAKKSWI----PAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPA 91

Query: 336 TFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKFGEA 452
                RE E+IH RWAM   LG    +  S  GI + EA
Sbjct: 92  FLKWYREAELIHGRWAMAAVLGIFVGQAWS--GIPWFEA 128
to top
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 28/63 (44%), Positives = 34/63 (53%)
 Frame = +3

Query: 264 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGIKF 443
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG    +  S  GI +
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS--GIPW 125

Query: 444 GEA 452
            EA
Sbjct: 126 FEA 128
to top
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
 Frame = +3

Query: 279 GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKN--GIKFGE 449
           G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A G +  E +S +  G  +G+
Sbjct: 146 GYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSGDTWGTYWGD 205

Query: 450 AVW 458
           A +
Sbjct: 206 ATF 208
to top
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 32/110 (29%), Positives = 39/110 (35%), Gaps = 43/110 (39%)
 Frame = +3

Query: 225 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------- 350
           DRP +      ++P YL G   GDYG+D  GL    E             AKN       
Sbjct: 51  DRPLWFP--GAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIG 108

Query: 351 -------------------------RELEVIHSRWAMLGALGCVFPEILS 425
                                    RE E+IH RWAML  LG +  E L+
Sbjct: 109 TRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLT 158



 Score = 33.1 bits (74), Expect = 0.39
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +3

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 401
           +PG   +D  GL++DP   A+ +  E+ H+R AM+G LG
Sbjct: 214 YPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
to top
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2|
           (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP)
           (Fragment)
          Length = 150

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 414 EILSKNGIKFGEAVWFKA 467
           E+L KNG+KFGEAVWFKA
Sbjct: 1   ELLVKNGVKFGEAVWFKA 18
to top
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 31/108 (28%), Positives = 38/108 (35%), Gaps = 45/108 (41%)
 Frame = +3

Query: 264 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 350
           P +L G  PGD G+D  GLS   E             AKN                    
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 351 --------------RELEVIHSRWAMLGALGCVFPEILSKNGIKFGEA 452
                         RE E+IH RWAML  LG +  E  +  G+ + EA
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVSWVEA 164
to top
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 37/122 (30%), Positives = 45/122 (36%), Gaps = 44/122 (36%)
 Frame = +3

Query: 192 KSAPQSIWYGPDRPK-YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE----------- 335
           KSA +++    DRP  Y G  S   P +L G   GDYG+D  GL    E           
Sbjct: 45  KSAKKTVT--TDRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQ 99

Query: 336 TFAKN--------------------------------RELEVIHSRWAMLGALGCVFPEI 419
             AKN                                RE E+IH RWAML  LG +  E 
Sbjct: 100 NLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEW 159

Query: 420 LS 425
           L+
Sbjct: 160 LT 161



 Score = 35.0 bits (79), Expect = 0.10
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +3

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 401
           +PG   +D  GL+ADPE  A+ +  E+ H+R AM+  LG
Sbjct: 217 YPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
to top
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = +3

Query: 351 RELEVIHSRWAMLGALGCVFPEILSKNGIKFGEA 452
           RE E+IH RWAMLG LG +  E L+  GI + +A
Sbjct: 138 RECELIHGRWAMLGTLGAIAVEALT--GIAWQDA 169



 Score = 32.0 bits (71), Expect = 0.87
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +3

Query: 285 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 398
           +PG Y +D  GL+ADPE     +  E+ HSR AM+  L
Sbjct: 218 YPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
to top
>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)|
          Length = 4289

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
 Frame = +1

Query: 316 DCRLTQRPSPRTGSWR*STRGGRCSEPSG----ACSPRSCPRTASSSARLSGSR 465
           DC  +QR  PR  S R    GGRC    G     C  RSCPR  S   R    R
Sbjct: 243 DC--SQRSCPRGCSQRGRCEGGRCVCDPGYTGDDCGMRSCPRGCSQRGRCENGR 294
to top
>FTSZ_AGRTU (O30992) Cell division protein ftsZ|
          Length = 583

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 19/130 (14%)
 Frame = -2

Query: 407 HAPEGSEHRPPRVDHLQLPVLGEGLWVSRQSRGV--------PPVVAGELAGQVR-RGLL 255
           HAPE      PR+   Q PV  E   V RQ   V        PPVV  E+  + R   + 
Sbjct: 437 HAPEQVAVPAPRMQQAQAPVYQEPAPVGRQPEPVRMPKVEDFPPVVKAEMDHRDRATPVA 496

Query: 254 GERAQVLGTVRAVPDALGR---------ALDGPAHGXXXXXXXXXXXXVIAP-RGGAEEA 105
            E    +G ++ + ++LGR          +D P+              + AP RG  ++ 
Sbjct: 497 QEERGPMGLLKRITNSLGRREEEEVPSDMMDAPSMAPQRRAPLSPEASLYAPRRGQLDDH 556

Query: 104 GRLVQRRRGH 75
           GR       H
Sbjct: 557 GRATPSSSSH 566
to top
>GALT_ENTFA (Q836N8) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)|
           (Gal-1-P uridylyltransferase)
           (UDP-glucose--hexose-1-phosphate uridylyltransferase)
          Length = 497

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
 Frame = -2

Query: 452 SLAELDAVL-GQDLGEHAPEGSEHRPPRVDHLQLPVLG----EGLWVSRQSRGVPPVVAG 288
           SL ELD VL   ++ E  P+G  H  P V H++   +G     GL +      +PP +A 
Sbjct: 365 SLFELDLVLRDNNVSEEFPDGIFHPHPEVQHIKQENIGLIEVMGLAI------LPPRLAQ 418

Query: 287 ELAGQVRRGLLGERAQVLGTVRAVPDALGR 198
           EL  +V + LL +  Q+  + RA  D L +
Sbjct: 419 ELR-EVEKYLLKQPNQIAESHRAWADELSQ 447
to top
>NEUV_RANES (P11858) Vasotocin-neurophysin VT precursor (VT) [Contains:|
           Hydrin-2 (Hydrin II); Vasotocin; Neurophysin VT]
          Length = 141

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +1

Query: 304 GTPRDCRLTQR---PSPRTGSWR*STRGGRCSEPSGACSPRSCPRTAS 438
           GTP   R  +    PSP     +    GGRC+ P   C+ +SC   +S
Sbjct: 49  GTPETLRCVEENYLPSPCEAGGKPCGAGGRCAAPGVCCNDQSCTMDSS 96
to top
>FCPE_MACPY (Q40301) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast|
           precursor
          Length = 212

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 303 WDTAGL--SADPETFAKNRELEVIHSRWAMLGALG 401
           WD  GL   AD E F + R +E+ H R AML  +G
Sbjct: 49  WDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVG 83
to top
>NEUV_BUFJA (P08163) Vasotocin-neurophysin VT precursor (VT) [Contains:|
           Hydrin-2 (Hydrin II); Vasotocin; Neurophysin VT;
           Glycoprotein] (Fragment)
          Length = 159

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = +1

Query: 304 GTPRDCRLTQR---PSPRTGSWR*STRGGRCSEPSGACSPRSC 423
           GTP   R  +    PSP     +  + GGRC+ P   CS  +C
Sbjct: 66  GTPETLRCVEETYLPSPCEAGGKPCSSGGRCAAPGVCCSDDTC 108
to top
>TP53B_MOUSE (P70399) Tumor suppressor p53-binding protein 1 (p53-binding|
           protein 1) (p53BP1) (53BP1)
          Length = 1957

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = +1

Query: 370 TRGGRCSEPS---GACSPRSCPRTASSSARLSGSRP 468
           T    CS PS   G CSP S P T     +LSG +P
Sbjct: 310 TASDGCSTPSREEGGCSPVSTPATTLQLLQLSGQKP 345
to top
>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2|
          Length = 306

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +1

Query: 307 TPRDCRLTQRPSPRTGSWR*STRGGRCSEPSGA-CSPRSCPRTASSSARLSGSRPRA 474
           TP   R  QR  P TG WR   + G  + P G     R  PR      R   +RPRA
Sbjct: 221 TPAPRRPLQRRRPGTGPWRPGRQRGAGTAPPGTQPRQRPSPRPTPRRPRPRLARPRA 277
to top
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast|
           precursor (Fragment)
          Length = 182

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 303 WDTAGL--SADPETFAKNRELEVIHSRWAMLGALG 401
           WD  GL   AD E F + R +EV H R AML   G
Sbjct: 19  WDPLGLLADADQERFERLRYVEVKHGRIAMLAIAG 53
to top
>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast|
           precursor
          Length = 217

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 303 WDTAGL--SADPETFAKNRELEVIHSRWAMLGALG 401
           WD  GL   AD E F + R +EV H R AML   G
Sbjct: 54  WDPLGLLADADQERFERLRYVEVKHGRIAMLAIAG 88
to top
>CI150_RAT (Q5BJW5) Protein C9orf150 homolog|
          Length = 221

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +1

Query: 331 QRPSPRTGSWR*STRGGRCSEPSGACSPRSCPRTASSSARLSGSRPRA 474
           + P+PR G+   S  GG CS  S   S      ++SSS+  SGS  R+
Sbjct: 31  EEPAPREGAADPSGVGGSCSSSSSCSSFAPSVSSSSSSSPASGSPRRS 78
to top
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)|
          Length = 102

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 303 WDTAGLSADP--ETFAKNRELEVIHSRWAMLGALGCVFPEILSK 428
           +D  G +AD   E F K  + E+ H R AML  +G +  EI  K
Sbjct: 15  FDPLGFTADGSVENFKKLAQTEIKHGRVAMLATMGYITQEITGK 58
to top
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast|
           precursor (Fragment)
          Length = 211

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 303 WDTAGL--SADPETFAKNRELEVIHSRWAMLGALG 401
           WD  GL   AD E F + R +EV H R AML   G
Sbjct: 48  WDPLGLLADADQERFERLRYVEVKHGRIAMLAIAG 82
to top
>MCPH1_HUMAN (Q8NEM0) Microcephalin|
          Length = 835

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 166 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 47
           PPK    R RS+RR  +PR  +  C ++  +  VAG A E
Sbjct: 366 PPKEKCKRKRSTRRSIMPR--LQLCRSEGRLQHVAGPALE 403
to top
>SMG_DROME (Q23972) Protein Smaug|
          Length = 999

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 334 RPSPRTGSWR*STRGGRCSEPSGACSPRSCPRTASSS-ARLSGSR 465
           +PSP+  +   ST  G CS  + + S  SC   ASSS    SGSR
Sbjct: 292 QPSPQLVAGGSSTGSGSCSSSATSSSTASCSSVASSSLCPASGSR 336
to top
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast|
           precursor
          Length = 270

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
 Frame = +3

Query: 276 TGEFPGDYGWDTAGLSADPET--FAKNRELEVIHSRWAMLGALGCV-------FPEILSK 428
           +G F G   WD   L+A        + RE E+ H R AML ALG V       FP   + 
Sbjct: 67  SGPFKGV--WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVVGEQLEDFPAFFNF 124

Query: 429 NGIKFGEAV 455
           +G   G+A+
Sbjct: 125 DGHITGQAI 133
to top
>THIE_NEIG1 (Q5F5C2) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP|
           pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate
           synthase)
          Length = 205

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
 Frame = -2

Query: 467 GLEPDSLAELDAVLGQDLGEHAPEGSEHRPPRVDHLQLPVLGEGLWVSR----QSRGVPP 300
           GL   S+AELD  L    G  A         +    Q+P   +GL   R    Q+RG P 
Sbjct: 103 GLSTHSVAELDRALFVHPGYIASGAIFQTTTK----QMPTAPQGLDKLREYVEQARGTPV 158

Query: 299 VVAGELAGQVRRGLLGERAQVLGTVRAVPDA 207
           V  G +     R +L      L  VRAV +A
Sbjct: 159 VAIGGIDLNNARAVLATGVSSLAAVRAVTEA 189
to top
>GNTP_ECOLI (P0AC94) High-affinity gluconate transporter (Gluconate permease 3)|
           (Gnt-III system)
          Length = 447

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 138 LVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGD 296
           LV + G   G + +   + + P  I  G   PK+LG     TPS+L  + P D
Sbjct: 166 LVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVD 218
to top
>GNTP_ECO57 (P0AC95) High-affinity gluconate transporter (Gluconate permease 3)|
           (Gnt-III system)
          Length = 447

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 138 LVRSVGDFGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGD 296
           LV + G   G + +   + + P  I  G   PK+LG     TPS+L  + P D
Sbjct: 166 LVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVD 218
to top
>ACK2_BOVIN (O02742) Activated CDC42 kinase 2 (EC 2.7.10.2) (ACK-2)|
          Length = 747

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = -2

Query: 362 LQLPVLGEGLWVSRQSRGVPPVVAGELAGQVRRGLLGERAQVLGTVRAVPDALGRALD 189
           L+ P L  GLW+++ S  VP   AG   G+V     GE   V       P     A+D
Sbjct: 552 LRKPGLPRGLWLAKPSARVPGTKAGRGGGEVTLIDFGEEPVVPAPRPCAPSLAQLAMD 609
to top
>YAIC_ECOLI (P0AAP1) Hypothetical protein yaiC|
          Length = 371

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -3

Query: 463 LNQTASPNLMPFLDRISGNTHPRAPSIAH-REWITSSSLFLAKVSGSADN 317
           LN    PN      RIS    P  P ++H REW+ S+ L L K   +  N
Sbjct: 316 LNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365
to top
>YAIC_ECOL6 (P0AAP2) Hypothetical protein yaiC|
          Length = 371

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -3

Query: 463 LNQTASPNLMPFLDRISGNTHPRAPSIAH-REWITSSSLFLAKVSGSADN 317
           LN    PN      RIS    P  P ++H REW+ S+ L L K   +  N
Sbjct: 316 LNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN 365
to top
>MCPH1_MACFA (Q5IFK1) Microcephalin|
          Length = 842

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 166 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 47
           PPK    R RS RR  +PR  +  C ++ ++  +AG A E
Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGSLQCMAGPALE 403
to top
>YM67_YEAST (Q03661) Hypothetical 187.1 kDa protein in GUA1-ERG8 intergenic|
           region
          Length = 1658

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -2

Query: 464 LEPDSLAELDAVLGQDLGEHAPEGSEHRPPRVDHLQLPVL 345
           ++ +S AE D   G +  EH+ + S++  PR D+ ++PV+
Sbjct: 297 IDVESDAEKDESQGAEGTEHSVDFSKYMQPRTDNTKIPVI 336
to top
>RNC_SYMTH (Q67PF5) Ribonuclease III (EC 3.1.26.3) (RNase III)|
          Length = 235

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 32/118 (27%), Positives = 43/118 (36%), Gaps = 8/118 (6%)
 Frame = -2

Query: 407 HAPEGSEHRPPRVDHLQLPVLGEGLW----VSRQSRGVPPVVAGEL----AGQVRRGLLG 252
           H    +EH   R +  +L  LG+ +      +      P +  GEL    A  V    L 
Sbjct: 34  HTTYANEHPRARANE-RLEFLGDSVLGMVIAAHLYERYPDLPEGELTKIRAAVVCEPSLA 92

Query: 251 ERAQVLGTVRAVPDALGRALDGPAHGXXXXXXXXXXXXVIAPRGGAEEAGRLVQRRRG 78
           ERA+VLG  R +    G A+ G                 +   GG E A R V R  G
Sbjct: 93  ERARVLGIGRHMRFGRGEAVSGRDRDSTLSDAFEAVVGALYLDGGLEAAQRFVLRELG 150
to top
>MCPH1_PANTR (P61593) Microcephalin|
          Length = 835

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 166 PPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACE 47
           PPK    R RS RR  +PR  +  C ++  +  VAG A E
Sbjct: 366 PPKEKCKRKRSIRRSIMPR--LQLCRSEGRLQHVAGPALE 403
to top
>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast|
           precursor
          Length = 217

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 303 WDTAGL--SADPETFAKNRELEVIHSRWAMLGALG 401
           WD  GL   AD + F + R +EV H R AML   G
Sbjct: 54  WDPLGLLADADQDGFERLRYVEVKHGRIAMLAIAG 88
to top
>PACA_HUMAN (P18509) Pituitary adenylate cyclase-activating polypeptide|
           precursor (PACAP) [Contains: PACAP-related peptide
           (PRP-48); Pituitary adenylate cyclase-activating
           polypeptide 27 (PACAP-27) (PACAP27); Pituitary adenylate
           cyclase-activating polypep
          Length = 176

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 388 SEPSGACSPRSCPRTASSSARLSGSR 465
           SEP GA SP S PR A++  R +G R
Sbjct: 56  SEPPGAGSPASAPRAAAAWYRPAGRR 81
to top
>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p|
           Ib)
          Length = 308

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +1

Query: 46  ARRQPQPPAKWPRRRC---TRRPASSAPPR 126
           A RQP PP   P RR    + RP S +PPR
Sbjct: 67  ASRQPWPPLPTPLRRTSSRSSRPPSPSPPR 96
to top
>KKCC2_RAT (O88831) Calcium/calmodulin-dependent protein kinase kinase 2 (EC|
           2.7.11.17) (Calcium/calmodulin-dependent protein kinase
           kinase beta) (CaM-kinase kinase beta) (CaM-KK beta)
           (CaMKK beta)
          Length = 587

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
 Frame = +1

Query: 310 PRDCRLTQRP-----SPRTGSWR*STRGGRCSEPSGACSPRSCPRT 432
           P++ R  ++P     SP  G      +GG C E  GA +P S PRT
Sbjct: 530 PKEARQRRQPPGPRASPCGGGGSALVKGGPCVESCGAPAPGSPPRT 575


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,015,747
Number of Sequences: 219361
Number of extensions: 1366171
Number of successful extensions: 5437
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 5162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5417
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top