ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet115c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member ... 114 1e-25
2TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member ... 114 1e-25
3TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 ... 86 8e-20
4TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member ... 86 8e-20
5TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member ... 86 8e-20
6TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member ... 86 8e-20
7TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 ... 87 2e-17
8TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member ... 85 6e-17
9TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member ... 85 7e-17
10TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member ... 85 7e-17
11TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4 83 5e-16
12EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa en... 74 2e-13
13RPOC1_SACOF (Q6ENX2) DNA-directed RNA polymerase beta' chain (EC... 31 2.2
14RPOC1_SACHY (Q6L3A6) DNA-directed RNA polymerase beta' chain (EC... 31 2.2
15INX3_CAEEL (Q19746) Innexin-3 30 4.8
16RLM1_YEAST (Q12224) Transcription factor RLM1 29 6.3
17HIS2_SHEON (Q8EFB6) Histidine biosynthesis bifunctional protein ... 29 8.2
18CYST_SALTY (P41032) Sulfate transport system permease protein cysT 29 8.2

>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor|
           (SM-11044-binding protein) (EP70-P-iso)
          Length = 589

 Score =  114 bits (285), Expect = 1e-25
 Identities = 67/164 (40%), Positives = 89/164 (54%), Gaps = 6/164 (3%)
 Frame = +1

Query: 1   FMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXXGWKLVHGDVFRPPCNL 180
           FMMVIFL GLVSMILMRTLR DYA+Y+                 GWK VHGDVFRP  + 
Sbjct: 230 FMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEY-GWKQVHGDVFRPSSHP 288

Query: 181 MFLSAVVGIGTQMXXXXXXXXXXXXXGMLYVGRGAIITTFIVCYALTSFISGYVSGGLYS 360
           +  S+++G G Q+               LY  RG++++T I  YA TS ++GY  G LY+
Sbjct: 289 LIFSSLIGSGCQIFAVSLIVIIVAMIEDLYTERGSMLSTAIFVYAATSPVNGYFGGSLYA 348

Query: 361 RNGGKNWIK--IYGPYCVPFSV---LVLFNWISV-EHDCYLLPF 474
           R GG+ WIK    G + +P  V       N+I++  H    +PF
Sbjct: 349 RQGGRRWIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPF 392



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +2

Query: 386 KSMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           K M + A L P +       +N IAI+YH+  AIPFGTMV
Sbjct: 357 KQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMV 396



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>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor|
          Length = 587

 Score =  114 bits (285), Expect = 1e-25
 Identities = 67/164 (40%), Positives = 89/164 (54%), Gaps = 6/164 (3%)
 Frame = +1

Query: 1   FMMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXXGWKLVHGDVFRPPCNL 180
           FMMVIFL GLVSMILMRTLR DYA+Y+                 GWK VHGDVFRP  + 
Sbjct: 228 FMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEY-GWKQVHGDVFRPSSHP 286

Query: 181 MFLSAVVGIGTQMXXXXXXXXXXXXXGMLYVGRGAIITTFIVCYALTSFISGYVSGGLYS 360
           +  S+++G G Q+               LY  RG++++T I  YA TS ++GY  G LY+
Sbjct: 287 LIFSSLIGSGCQIFAVSLIVIIVAMIEDLYTERGSMLSTAIFVYAATSPVNGYFGGSLYA 346

Query: 361 RNGGKNWIK--IYGPYCVPFSV---LVLFNWISV-EHDCYLLPF 474
           R GG+ WIK    G + +P  V       N+I++  H    +PF
Sbjct: 347 RQGGRRWIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPF 390



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +2

Query: 386 KSMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           K M + A L P +       +N IAI+YH+  AIPFGTMV
Sbjct: 355 KQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMV 394



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>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 663

 Score = 85.9 bits (211), Expect(2) = 8e-20
 Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
 Frame = +1

Query: 4   MMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXXGWKLVHGDVFRPPCNLM 183
           ++V+FL+G+V+MI++RTL  D A+Y                  GWKLVHGD+FRPP   M
Sbjct: 309 VIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGM 363

Query: 184 FLSAVVGIGTQMXXXXXXXXXXXXXGMLY-VGRGAIITTFIVCYALTSFISGYVSGGLYS 360
            LS  +G GTQ+             G L    RGA++T  +V + L    +GYV+   Y 
Sbjct: 364 LLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYK 423

Query: 361 RNGGKNW 381
             GG+ W
Sbjct: 424 SFGGEKW 430



 Score = 30.0 bits (66), Expect(2) = 8e-20
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 389 SMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           +++LT+ L P + F+   ++N I     S AAIPFGT+V
Sbjct: 433 NVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLV 471



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>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 663

 Score = 85.9 bits (211), Expect(2) = 8e-20
 Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
 Frame = +1

Query: 4   MMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXXGWKLVHGDVFRPPCNLM 183
           ++V+FL+G+V+MI++RTL  D A+Y                  GWKLVHGD+FRPP   M
Sbjct: 309 VIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGM 363

Query: 184 FLSAVVGIGTQMXXXXXXXXXXXXXGMLY-VGRGAIITTFIVCYALTSFISGYVSGGLYS 360
            LS  +G GTQ+             G L    RGA++T  +V + L    +GYV+   Y 
Sbjct: 364 LLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYK 423

Query: 361 RNGGKNW 381
             GG+ W
Sbjct: 424 SFGGEKW 430



 Score = 30.0 bits (66), Expect(2) = 8e-20
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 389 SMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           +++LT+ L P + F+   ++N I     S AAIPFGT+V
Sbjct: 433 NVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLV 471



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>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor|
           (p76)
          Length = 663

 Score = 85.9 bits (211), Expect(2) = 8e-20
 Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
 Frame = +1

Query: 4   MMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXXGWKLVHGDVFRPPCNLM 183
           ++V+FL+G+V+MI++RTL  D A+Y                  GWKLVHGD+FRPP   M
Sbjct: 309 VIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGM 363

Query: 184 FLSAVVGIGTQMXXXXXXXXXXXXXGMLY-VGRGAIITTFIVCYALTSFISGYVSGGLYS 360
            LS  +G GTQ+             G L    RGA++T  +V + L    +GYV+   Y 
Sbjct: 364 LLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYK 423

Query: 361 RNGGKNW 381
             GG+ W
Sbjct: 424 SFGGEKW 430



 Score = 30.0 bits (66), Expect(2) = 8e-20
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 389 SMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           +++LT+ L P + F+   ++N I     S AAIPFGT+V
Sbjct: 433 NVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLV 471



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>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 662

 Score = 85.9 bits (211), Expect(2) = 8e-20
 Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
 Frame = +1

Query: 4   MMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXXGWKLVHGDVFRPPCNLM 183
           ++V+FL+G+V+MI++RTL  D A+Y                  GWKLVHGD+FRPP   M
Sbjct: 308 VIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGM 362

Query: 184 FLSAVVGIGTQMXXXXXXXXXXXXXGMLY-VGRGAIITTFIVCYALTSFISGYVSGGLYS 360
            LS  +G GTQ+             G L    RGA++T  +V + L    +GYV+   Y 
Sbjct: 363 LLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYK 422

Query: 361 RNGGKNW 381
             GG+ W
Sbjct: 423 SFGGEKW 429



 Score = 30.0 bits (66), Expect(2) = 8e-20
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 389 SMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           +++LT+ L P + F+   ++N I     S AAIPFGT+V
Sbjct: 432 NVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLV 470



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>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 589

 Score = 86.7 bits (213), Expect(2) = 2e-17
 Identities = 53/131 (40%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
 Frame = +1

Query: 4   MMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXX--GWKLVHGDVFR-PPC 174
           ++V  L G V++ILMR LRND A+Y                    GWK++H DVFR PPC
Sbjct: 244 VLVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSSDDFDQGDNGWKIIHTDVFRFPPC 303

Query: 175 NLMFLSAVVGIGTQMXXXXXXXXXXXXXGMLYVGR-GAIITTFIVCYALTSFISGYVSGG 351
             + L AV+G+G Q              GM  V R GAI +  I+ YALT  ISGYVS  
Sbjct: 304 RGL-LCAVLGVGAQFLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSH 362

Query: 352 LYSRNGGKNWI 384
            Y + GG+ W+
Sbjct: 363 FYRQIGGERWV 373



 Score = 21.2 bits (43), Expect(2) = 2e-17
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 389 SMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           +++LT SLF    F    V+N++     S  A+P  T++
Sbjct: 375 NIILTTSLFSVPFFLTWSVVNSVHWANGSTQALPVTTIL 413



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>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 606

 Score = 85.1 bits (209), Expect(2) = 6e-17
 Identities = 51/130 (39%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
 Frame = +1

Query: 4   MMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXX--GWKLVHGDVFRPPCN 177
           ++V  L G V++ILMR LRND A+Y                    GWK++H DVFR P  
Sbjct: 244 VLVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSSDDFDQGDNGWKIIHTDVFRFPPY 303

Query: 178 LMFLSAVVGIGTQMXXXXXXXXXXXXXGMLYVGR-GAIITTFIVCYALTSFISGYVSGGL 354
              L AV+G+G Q              GM  V R GAI +  I+ YALT  ISGYVS   
Sbjct: 304 RGLLCAVLGVGAQFLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHF 363

Query: 355 YSRNGGKNWI 384
           Y + GG+ W+
Sbjct: 364 YRQIGGERWV 373



 Score = 21.2 bits (43), Expect(2) = 6e-17
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 389 SMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           +++LT+SLF    F    V+N++     S  A+P  T++
Sbjct: 375 NIILTSSLFSVPFFLTWSVVNSVHWANGSTQALPATTIL 413



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>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 606

 Score = 85.1 bits (209), Expect(2) = 7e-17
 Identities = 51/130 (39%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
 Frame = +1

Query: 4   MMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXX--GWKLVHGDVFRPPCN 177
           ++V  L G V++ILMR LRND A+Y                    GWK++H DVFR P  
Sbjct: 244 VLVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSGDDFDQGDNGWKIIHTDVFRFPPY 303

Query: 178 LMFLSAVVGIGTQMXXXXXXXXXXXXXGMLYVGR-GAIITTFIVCYALTSFISGYVSGGL 354
              L AV+G+G Q              GM  V R GAI +  I+ YALT  ISGYVS   
Sbjct: 304 RGLLCAVLGVGAQFLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHF 363

Query: 355 YSRNGGKNWI 384
           Y + GG+ W+
Sbjct: 364 YRQIGGERWV 373



 Score = 20.8 bits (42), Expect(2) = 7e-17
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 389 SMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           +++LT SLF    F    V+N++     S  A+P  T++
Sbjct: 375 NIILTTSLFSVPFFLTWSVVNSVHWANGSTQALPATTIL 413



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>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor|
           (hMP70)
          Length = 606

 Score = 85.1 bits (209), Expect(2) = 7e-17
 Identities = 51/130 (39%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
 Frame = +1

Query: 4   MMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXX--GWKLVHGDVFRPPCN 177
           ++V  L G V++ILMR LRND A+Y                    GWK++H DVFR P  
Sbjct: 244 VLVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSGDDFDQGDNGWKIIHTDVFRFPPY 303

Query: 178 LMFLSAVVGIGTQMXXXXXXXXXXXXXGMLYVGR-GAIITTFIVCYALTSFISGYVSGGL 354
              L AV+G+G Q              GM  V R GAI +  I+ YALT  ISGYVS   
Sbjct: 304 RGLLCAVLGVGAQFLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHF 363

Query: 355 YSRNGGKNWI 384
           Y + GG+ W+
Sbjct: 364 YRQIGGERWV 373



 Score = 20.8 bits (42), Expect(2) = 7e-17
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 389 SMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           +++LT SLF    F    V+N++     S  A+P  T++
Sbjct: 375 NIILTTSLFSVPFFLTWSVVNSVHWANGSTQALPATTIL 413



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>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4|
          Length = 625

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 57/166 (34%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
 Frame = +1

Query: 4   MMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXXGWKLVHGDVFRPPCNLM 183
           ++V FL+G++SMI++RTLR D A Y                  GWKLVHGDVFRPP   M
Sbjct: 271 VVVFFLSGILSMIIIRTLRKDIANY-----NKEDDIEDTMEESGWKLVHGDVFRPPQYPM 325

Query: 184 FLSAVVGIGTQMXXXXXXXXXXXXXGMLY-VGRGAIITTFIVCYALTSFISGYVSGGLYS 360
            LS+++G G Q+             GML    RGA++TT    +       G+ +G LY 
Sbjct: 326 ILSSLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYR 385

Query: 361 RNGGKNWIKIYGPYC-------VPFSVLVLFN-WISVEHDCYLLPF 474
              G  W K  G +C       V F +  + N +I  +H    +PF
Sbjct: 386 TLKGHRWKK--GAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPF 429



 Score = 33.9 bits (76), Expect = 0.26
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +2

Query: 386 KSMVLTASLFPFLCFSIGLVLNTIAIFYHSLAAIPFGTMV 505
           K    TA+L+P + F I  VLN      HS  A+PF TMV
Sbjct: 394 KGAFCTATLYPGVVFGICFVLNCFIWGKHSSGAVPFPTMV 433



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>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane|
           protein) (Pheromone alpha-factor transporter) (Acidic 24
           kDa late endocytic intermediate component)
          Length = 667

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
 Frame = +1

Query: 4   MMVIFLTGLVSMILMRTLRNDYAKYAXXXXXXXXXXXXXXXXXGWKLVHGDVFRPPCNLM 183
           ++V+ L+ +V   L+R L++D+A+Y                  GWKL HGDVFR P   +
Sbjct: 313 LVVVLLSSVVIHSLLRALKSDFARY-----NELNLDDDFQEDSGWKLNHGDVFRSPSQSL 367

Query: 184 FLSAVVGIGTQMXXXXXXXXXXXXXGMLY-VGRGAIITTFIVCYALTSFISGYVSGGLYS 360
            LS +VG G Q+             G L    RG++ T   + YAL  F+  Y S G+Y 
Sbjct: 368 TLSILVGSGVQLFLMVTCSIFFAALGFLSPSSRGSLATVMFILYALFGFVGSYTSMGIYK 427

Query: 361 RNGGKNWIK--IYGPYCVPFSVLVL 429
              G  W    I  P  VP ++L++
Sbjct: 428 FFNGPYWKANLILTPLLVPGAILLI 452



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>RPOC1_SACOF (Q6ENX2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 683

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 330 NERCKCVAHDKGCDNSSSSYIKHTNNGKYNNKQDKSCHLSAN 205
           N R  C      C NS +  I + NN  Y   +DK  H S++
Sbjct: 546 NRRGICANRYNSCGNSPNKKINYNNNNYYKYTKDKEPHFSSS 587



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>RPOC1_SACHY (Q6L3A6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 683

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 330 NERCKCVAHDKGCDNSSSSYIKHTNNGKYNNKQDKSCHLSAN 205
           N R  C      C NS +  I + NN  Y   +DK  H S++
Sbjct: 546 NRRGICANRYNSCGNSPNKKINYNNNNYYKYTKDKEPHFSSS 587



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>INX3_CAEEL (Q19746) Innexin-3|
          Length = 420

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -2

Query: 315 CVAHDKGCDNSSSSYIKHTNNGKYNNKQDKSCHLSANANNG 193
           C  +    D+S  +YI+   +G  NN +D+   +++ ANNG
Sbjct: 299 CTIYRLSFDSSRHNYIRSLLSGPVNNFKDEKAMIASFANNG 339



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>RLM1_YEAST (Q12224) Transcription factor RLM1|
          Length = 676

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -2

Query: 291 DNSSSSYIKHTNNGKYNNKQDKSCHLSANANNGRQKH*VAWRPKYISMNK 142
           +N +SS I  TNN   NN  + +   + N+NNG   +       Y S N+
Sbjct: 556 NNGNSSNISSTNNTNNNNNNNNNNSSNNNSNNGNDNNSNNSNNSYYSNNE 605



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>HIS2_SHEON (Q8EFB6) Histidine biosynthesis bifunctional protein hisIE|
           [Includes: Phosphoribosyl-AMP cyclohydrolase (EC
           3.5.4.19) (PRA-CH); Phosphoribosyl-ATP pyrophosphatase
           (EC 3.6.1.31) (PRA-PH)]
          Length = 211

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -2

Query: 318 KCVAHDKGCDNSSSSYIKHTNNGKYNNKQDKSCHLSANAN 199
           K VA DK CDN  S  ++   NG   +K  +SC L  NA+
Sbjct: 77  KLVAIDKDCDN-DSLLVQVLPNGPTCHKGTESCWLDGNAH 115



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>CYST_SALTY (P41032) Sulfate transport system permease protein cysT|
          Length = 277

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = +1

Query: 268 YVGRGAIITTFIVCYALTSFISGYVSGGLYSRNGGKNWIKIYGPYCVPFSVLVLFNWISV 447
           + GR  +     + +AL + ++G     L+S NG       YG +   F + V + W+ +
Sbjct: 90  FPGRTLLDALMDLPFALPTAVAGLTLASLFSVNG------FYGQFLAQFDIKVTYTWLGI 143


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,608,428
Number of Sequences: 219361
Number of extensions: 1258202
Number of successful extensions: 4061
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3967
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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