ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet115c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 349 bits (176), Expect = 5e-93 Identities = 314/360 (87%) Strand = Plus / Minus Query: 125 gcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctcctgct 184 ||||||||| ||||| || | ||| |||||||||||||||||||| ||||||||||| || Sbjct: 31374 gcggctgccgcccgggccgtcgcagctgccgctcatcggcagcctgcaccacctcctcct 31315 Query: 185 gtcgcgctccggggacctgccccaccgggccatgcgcgacctatcccgcgcccacggccc 244 ||| || | ||| |||||||| ||||||||||||||||| || |||| || ||||||| Sbjct: 31314 gtcacggtacggcgacctgccgcaccgggccatgcgcgagctgtccctgacctacggccc 31255 Query: 245 gctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggccgc 304 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 31254 cctcatgctcctccgcctcggcgccgtgcccacgctggtcgtctcctccgccgaggccgc 31195 Query: 305 cagggaggtcatgaagacccacgacgccgccttcgccagccgccacctcagcgccacgct 364 ||||||||||| | | |||||||||||||||||| ||||||||||||||||||| | Sbjct: 31194 ggcggaggtcatgagggcgcacgacgccgccttcgccggccgccacctcagcgccaccat 31135 Query: 365 cgacatcatcagctgcggcggcaagggcatcctcttctccccctacaacgaccgctggcg 424 ||||||| |||||||||||||||||| |||| ||||| ||||||| ||| || ||||| Sbjct: 31134 cgacatcctcagctgcggcggcaaggacatcatcttcgggccctacaccgagcggtggcg 31075 Query: 425 cgagctccgcaggatctgcgtgctcgagctcttcagccagcgccgcgtgctctccttccg 484 ||||||||||| | | |||| |||||||||||||| ||| |||||||||||||||||||| Sbjct: 31074 cgagctccgcaaggtgtgcgcgctcgagctcttcaaccaccgccgcgtgctctccttccg 31015 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 295 ccgaggccgccagggaggtcatgaagacccacgacgccgcc 335 |||| |||||||||||||| | ||||| |||||||||||| Sbjct: 116023 ccgacgccgccagggaggtgctcaagacgcacgacgccgcc 116063
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 349 bits (176), Expect = 5e-93 Identities = 314/360 (87%) Strand = Plus / Plus Query: 125 gcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctcctgct 184 ||||||||| ||||| || | ||| |||||||||||||||||||| ||||||||||| || Sbjct: 21856442 gcggctgccgcccgggccgtcgcagctgccgctcatcggcagcctgcaccacctcctcct 21856501 Query: 185 gtcgcgctccggggacctgccccaccgggccatgcgcgacctatcccgcgcccacggccc 244 ||| || | ||| |||||||| ||||||||||||||||| || |||| || ||||||| Sbjct: 21856502 gtcacggtacggcgacctgccgcaccgggccatgcgcgagctgtccctgacctacggccc 21856561 Query: 245 gctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggccgc 304 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 21856562 cctcatgctcctccgcctcggcgccgtgcccacgctggtcgtctcctccgccgaggccgc 21856621 Query: 305 cagggaggtcatgaagacccacgacgccgccttcgccagccgccacctcagcgccacgct 364 ||||||||||| | | |||||||||||||||||| ||||||||||||||||||| | Sbjct: 21856622 ggcggaggtcatgagggcgcacgacgccgccttcgccggccgccacctcagcgccaccat 21856681 Query: 365 cgacatcatcagctgcggcggcaagggcatcctcttctccccctacaacgaccgctggcg 424 ||||||| |||||||||||||||||| |||| ||||| ||||||| ||| || ||||| Sbjct: 21856682 cgacatcctcagctgcggcggcaaggacatcatcttcgggccctacaccgagcggtggcg 21856741 Query: 425 cgagctccgcaggatctgcgtgctcgagctcttcagccagcgccgcgtgctctccttccg 484 ||||||||||| | | |||| |||||||||||||| ||| |||||||||||||||||||| Sbjct: 21856742 cgagctccgcaaggtgtgcgcgctcgagctcttcaaccaccgccgcgtgctctccttccg 21856801 Score = 200 bits (101), Expect = 3e-48 Identities = 269/325 (82%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacaccacctcctgctgtcgcgctccggggacctgccccac 209 ||||||||| |||| ||||| |||||| |||||||||||||| ||| |||||||||||| Sbjct: 21931388 ctgccgctcgtcgggagcctgcaccacgtcctgctgtcgcgccacggcgacctgccccac 21931447 Query: 210 cgggccatgcgcgacctatcccgcgcccacggcccgctcatgctcctccagctcggcgcc 269 ||||| ||||||| || || | ||||| |||||||||| |||| | |||||||| Sbjct: 21931448 cgggcgctgcgcgagctcgccgggaggtacggcgcgctcatgctgctccggttcggcgcc 21931507 Query: 270 gtgcccacgctcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgac 329 ||||| ||||||||||| || || || ||||| ||||||||||| | ||||| |||||| Sbjct: 21931508 gtgccgacgctcgtcgtgtcgtcggcggaggcggccagggaggtgctcaagacgcacgac 21931567 Query: 330 gccgccttcgccagccgccacctcagcgccacgctcgacatcatcagctgcggcggcaag 389 || |||||||||||||||| | | ||||||||| | || ||| | |||||||| | Sbjct: 21931568 gcgtgcttcgccagccgccacatgacgcccacgctcgccgtcttcacccgcggcggccgg 21931627 Query: 390 ggcatcctcttctccccctacaacgaccgctggcgcgagctccgcaggatctgcgtgctc 449 | ||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||| Sbjct: 21931628 gacatcctcttctccccctacggcgacctgtggcgccagctccggaggatctgcgtgctc 21931687 Query: 450 gagctcttcagccagcgccgcgtgc 474 |||||||||||| ||||||||||| Sbjct: 21931688 gagctcttcagcgcgcgccgcgtgc 21931712 Score = 176 bits (89), Expect = 4e-41 Identities = 286/349 (81%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 125 gcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctcctgct 184 ||||||||| || || || ||||| ||||||||| |||| ||||| |||||| ||||||| Sbjct: 21891511 gcggctgccgccggggccgtggcagctgccgctcgtcgggagcctgcaccacgtcctgct 21891570 Query: 185 gtcgcgctccggggacctgccccaccgggccatgcgcgacctatcccgcgcccacggccc 244 ||||||| || |||||||| ||| |||| ||||||| || || || ||||||| Sbjct: 21891571 gtcgcgccacgccgacctgccacacagggcgctgcgcgagctcgccggcaagtacggccc 21891630 Query: 245 gctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggccgc 304 ||||||| | |||| |||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 21891631 gctcatgatgctccgcttcggtgccgtgccgacgctcgtcgtgtcgtcggccgaggccgc 21891690 Query: 305 cagggaggtcatgaagacccacgacgccgccttcgccagccgccacctcagcgcc-acgc 363 ||||||||| | ||||| ||||||||||||||||||||||| |||||| |||| || | Sbjct: 21891691 cagggaggtgctcaagacgtacgacgccgccttcgccagccgctacctca-cgccgaccc 21891749 Query: 364 tcgacatcatcagctgcggcggcaagggcatcctcttctccccctacaacgaccgctggc 423 | | | || ||||| |||||||| | ||||||||||||||||||| ||||| |||| Sbjct: 21891750 tggccgtcctcagccgcggcggccgcgacatcctcttctccccctactgcgacctgtggc 21891809 Query: 424 gcgagctccgcaggatctgcgtgctcgagctcttcagccagcgccgcgt 472 || ||||||| ||||||||||||| ||||||| ||||| ||||||||| Sbjct: 21891810 gccagctccggaggatctgcgtgcacgagctcctcagcgcgcgccgcgt 21891858 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 428 gctccgcaggatctgcgtgctcgagctcttcagc 461 |||||| ||||||||||||||||||||||||||| Sbjct: 13957779 gctccgaaggatctgcgtgctcgagctcttcagc 13957746 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 282 gtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgcc 341 |||| ||||||||||| ||||||||| ||| | |||||||||||||||||||||||| Sbjct: 24934918 gtcgcctcctccgccggcgccgccaggctcgtcctcaagacccacgacgccgccttcgcc 24934859 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 295 ccgaggccgccagggaggtcatgaagacccacgacgccgcc 335 |||| |||||||||||||| | ||||| |||||||||||| Sbjct: 21771793 ccgacgccgccagggaggtgctcaagacgcacgacgccgcc 21771753
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 349 bits (176), Expect = 5e-93 Identities = 314/360 (87%) Strand = Plus / Plus Query: 125 gcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctcctgct 184 ||||||||| ||||| || | ||| |||||||||||||||||||| ||||||||||| || Sbjct: 21849471 gcggctgccgcccgggccgtcgcagctgccgctcatcggcagcctgcaccacctcctcct 21849530 Query: 185 gtcgcgctccggggacctgccccaccgggccatgcgcgacctatcccgcgcccacggccc 244 ||| || | ||| |||||||| ||||||||||||||||| || |||| || ||||||| Sbjct: 21849531 gtcacggtacggcgacctgccgcaccgggccatgcgcgagctgtccctgacctacggccc 21849590 Query: 245 gctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggccgc 304 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 21849591 cctcatgctcctccgcctcggcgccgtgcccacgctggtcgtctcctccgccgaggccgc 21849650 Query: 305 cagggaggtcatgaagacccacgacgccgccttcgccagccgccacctcagcgccacgct 364 ||||||||||| | | |||||||||||||||||| ||||||||||||||||||| | Sbjct: 21849651 ggcggaggtcatgagggcgcacgacgccgccttcgccggccgccacctcagcgccaccat 21849710 Query: 365 cgacatcatcagctgcggcggcaagggcatcctcttctccccctacaacgaccgctggcg 424 ||||||| |||||||||||||||||| |||| ||||| ||||||| ||| || ||||| Sbjct: 21849711 cgacatcctcagctgcggcggcaaggacatcatcttcgggccctacaccgagcggtggcg 21849770 Query: 425 cgagctccgcaggatctgcgtgctcgagctcttcagccagcgccgcgtgctctccttccg 484 ||||||||||| | | |||| |||||||||||||| ||| |||||||||||||||||||| Sbjct: 21849771 cgagctccgcaaggtgtgcgcgctcgagctcttcaaccaccgccgcgtgctctccttccg 21849830 Score = 200 bits (101), Expect = 3e-48 Identities = 269/325 (82%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacaccacctcctgctgtcgcgctccggggacctgccccac 209 ||||||||| |||| ||||| |||||| |||||||||||||| ||| |||||||||||| Sbjct: 21924417 ctgccgctcgtcgggagcctgcaccacgtcctgctgtcgcgccacggcgacctgccccac 21924476 Query: 210 cgggccatgcgcgacctatcccgcgcccacggcccgctcatgctcctccagctcggcgcc 269 ||||| ||||||| || || | ||||| |||||||||| |||| | |||||||| Sbjct: 21924477 cgggcgctgcgcgagctcgccgggaggtacggcgcgctcatgctgctccggttcggcgcc 21924536 Query: 270 gtgcccacgctcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgac 329 ||||| ||||||||||| || || || ||||| ||||||||||| | ||||| |||||| Sbjct: 21924537 gtgccgacgctcgtcgtgtcgtcggcggaggcggccagggaggtgctcaagacgcacgac 21924596 Query: 330 gccgccttcgccagccgccacctcagcgccacgctcgacatcatcagctgcggcggcaag 389 || |||||||||||||||| | | ||||||||| | || ||| | |||||||| | Sbjct: 21924597 gcgtgcttcgccagccgccacatgacgcccacgctcgccgtcttcacccgcggcggccgg 21924656 Query: 390 ggcatcctcttctccccctacaacgaccgctggcgcgagctccgcaggatctgcgtgctc 449 | ||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||| Sbjct: 21924657 gacatcctcttctccccctacggcgacctgtggcgccagctccggaggatctgcgtgctc 21924716 Query: 450 gagctcttcagccagcgccgcgtgc 474 |||||||||||| ||||||||||| Sbjct: 21924717 gagctcttcagcgcgcgccgcgtgc 21924741 Score = 176 bits (89), Expect = 4e-41 Identities = 286/349 (81%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 125 gcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctcctgct 184 ||||||||| || || || ||||| ||||||||| |||| ||||| |||||| ||||||| Sbjct: 21884540 gcggctgccgccggggccgtggcagctgccgctcgtcgggagcctgcaccacgtcctgct 21884599 Query: 185 gtcgcgctccggggacctgccccaccgggccatgcgcgacctatcccgcgcccacggccc 244 ||||||| || |||||||| ||| |||| ||||||| || || || ||||||| Sbjct: 21884600 gtcgcgccacgccgacctgccacacagggcgctgcgcgagctcgccggcaagtacggccc 21884659 Query: 245 gctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggccgc 304 ||||||| | |||| |||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 21884660 gctcatgatgctccgcttcggtgccgtgccgacgctcgtcgtgtcgtcggccgaggccgc 21884719 Query: 305 cagggaggtcatgaagacccacgacgccgccttcgccagccgccacctcagcgcc-acgc 363 ||||||||| | ||||| ||||||||||||||||||||||| |||||| |||| || | Sbjct: 21884720 cagggaggtgctcaagacgtacgacgccgccttcgccagccgctacctca-cgccgaccc 21884778 Query: 364 tcgacatcatcagctgcggcggcaagggcatcctcttctccccctacaacgaccgctggc 423 | | | || ||||| |||||||| | ||||||||||||||||||| ||||| |||| Sbjct: 21884779 tggccgtcctcagccgcggcggccgcgacatcctcttctccccctactgcgacctgtggc 21884838 Query: 424 gcgagctccgcaggatctgcgtgctcgagctcttcagccagcgccgcgt 472 || ||||||| ||||||||||||| ||||||| ||||| ||||||||| Sbjct: 21884839 gccagctccggaggatctgcgtgcacgagctcctcagcgcgcgccgcgt 21884887 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 428 gctccgcaggatctgcgtgctcgagctcttcagc 461 |||||| ||||||||||||||||||||||||||| Sbjct: 13952754 gctccgaaggatctgcgtgctcgagctcttcagc 13952721 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 282 gtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgcc 341 |||| ||||||||||| ||||||||| ||| | |||||||||||||||||||||||| Sbjct: 25026193 gtcgcctcctccgccggcgccgccaggctcgtcctcaagacccacgacgccgccttcgcc 25026134 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 295 ccgaggccgccagggaggtcatgaagacccacgacgccgcc 335 |||| |||||||||||||| | ||||| |||||||||||| Sbjct: 21764822 ccgacgccgccagggaggtgctcaagacgcacgacgccgcc 21764782
>ref|NM_184957.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 200 bits (101), Expect = 3e-48 Identities = 269/325 (82%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacaccacctcctgctgtcgcgctccggggacctgccccac 209 ||||||||| |||| ||||| |||||| |||||||||||||| ||| |||||||||||| Sbjct: 139 ctgccgctcgtcgggagcctgcaccacgtcctgctgtcgcgccacggcgacctgccccac 198 Query: 210 cgggccatgcgcgacctatcccgcgcccacggcccgctcatgctcctccagctcggcgcc 269 ||||| ||||||| || || | ||||| |||||||||| |||| | |||||||| Sbjct: 199 cgggcgctgcgcgagctcgccgggaggtacggcgcgctcatgctgctccggttcggcgcc 258 Query: 270 gtgcccacgctcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgac 329 ||||| ||||||||||| || || || ||||| ||||||||||| | ||||| |||||| Sbjct: 259 gtgccgacgctcgtcgtgtcgtcggcggaggcggccagggaggtgctcaagacgcacgac 318 Query: 330 gccgccttcgccagccgccacctcagcgccacgctcgacatcatcagctgcggcggcaag 389 || |||||||||||||||| | | ||||||||| | || ||| | |||||||| | Sbjct: 319 gcgtgcttcgccagccgccacatgacgcccacgctcgccgtcttcacccgcggcggccgg 378 Query: 390 ggcatcctcttctccccctacaacgaccgctggcgcgagctccgcaggatctgcgtgctc 449 | ||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||| Sbjct: 379 gacatcctcttctccccctacggcgacctgtggcgccagctccggaggatctgcgtgctc 438 Query: 450 gagctcttcagccagcgccgcgtgc 474 |||||||||||| ||||||||||| Sbjct: 439 gagctcttcagcgcgcgccgcgtgc 463
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 200 bits (101), Expect = 3e-48 Identities = 269/325 (82%) Strand = Plus / Minus Query: 150 ctgccgctcatcggcagcctacaccacctcctgctgtcgcgctccggggacctgccccac 209 ||||||||| |||| ||||| |||||| |||||||||||||| ||| |||||||||||| Sbjct: 77628 ctgccgctcgtcgggagcctgcaccacgtcctgctgtcgcgccacggcgacctgccccac 77569 Query: 210 cgggccatgcgcgacctatcccgcgcccacggcccgctcatgctcctccagctcggcgcc 269 ||||| ||||||| || || | ||||| |||||||||| |||| | |||||||| Sbjct: 77568 cgggcgctgcgcgagctcgccgggaggtacggcgcgctcatgctgctccggttcggcgcc 77509 Query: 270 gtgcccacgctcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgac 329 ||||| ||||||||||| || || || ||||| ||||||||||| | ||||| |||||| Sbjct: 77508 gtgccgacgctcgtcgtgtcgtcggcggaggcggccagggaggtgctcaagacgcacgac 77449 Query: 330 gccgccttcgccagccgccacctcagcgccacgctcgacatcatcagctgcggcggcaag 389 || |||||||||||||||| | | ||||||||| | || ||| | |||||||| | Sbjct: 77448 gcgtgcttcgccagccgccacatgacgcccacgctcgccgtcttcacccgcggcggccgg 77389 Query: 390 ggcatcctcttctccccctacaacgaccgctggcgcgagctccgcaggatctgcgtgctc 449 | ||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||| Sbjct: 77388 gacatcctcttctccccctacggcgacctgtggcgccagctccggaggatctgcgtgctc 77329 Query: 450 gagctcttcagccagcgccgcgtgc 474 |||||||||||| ||||||||||| Sbjct: 77328 gagctcttcagcgcgcgccgcgtgc 77304 Score = 176 bits (89), Expect = 4e-41 Identities = 286/349 (81%), Gaps = 2/349 (0%) Strand = Plus / Minus Query: 125 gcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctcctgct 184 ||||||||| || || || ||||| ||||||||| |||| ||||| |||||| ||||||| Sbjct: 117505 gcggctgccgccggggccgtggcagctgccgctcgtcgggagcctgcaccacgtcctgct 117446 Query: 185 gtcgcgctccggggacctgccccaccgggccatgcgcgacctatcccgcgcccacggccc 244 ||||||| || |||||||| ||| |||| ||||||| || || || ||||||| Sbjct: 117445 gtcgcgccacgccgacctgccacacagggcgctgcgcgagctcgccggcaagtacggccc 117386 Query: 245 gctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggccgc 304 ||||||| | |||| |||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 117385 gctcatgatgctccgcttcggtgccgtgccgacgctcgtcgtgtcgtcggccgaggccgc 117326 Query: 305 cagggaggtcatgaagacccacgacgccgccttcgccagccgccacctcagcgcc-acgc 363 ||||||||| | ||||| ||||||||||||||||||||||| |||||| |||| || | Sbjct: 117325 cagggaggtgctcaagacgtacgacgccgccttcgccagccgctacctca-cgccgaccc 117267 Query: 364 tcgacatcatcagctgcggcggcaagggcatcctcttctccccctacaacgaccgctggc 423 | | | || ||||| |||||||| | ||||||||||||||||||| ||||| |||| Sbjct: 117266 tggccgtcctcagccgcggcggccgcgacatcctcttctccccctactgcgacctgtggc 117207 Query: 424 gcgagctccgcaggatctgcgtgctcgagctcttcagccagcgccgcgt 472 || ||||||| ||||||||||||| ||||||| ||||| ||||||||| Sbjct: 117206 gccagctccggaggatctgcgtgcacgagctcctcagcgcgcgccgcgt 117158
>dbj|AK069017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170D06, full insert sequence Length = 1763 Score = 200 bits (101), Expect = 3e-48 Identities = 269/325 (82%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacaccacctcctgctgtcgcgctccggggacctgccccac 209 ||||||||| |||| ||||| |||||| |||||||||||||| ||| |||||||||||| Sbjct: 189 ctgccgctcgtcgggagcctgcaccacgtcctgctgtcgcgccacggcgacctgccccac 248 Query: 210 cgggccatgcgcgacctatcccgcgcccacggcccgctcatgctcctccagctcggcgcc 269 ||||| ||||||| || || | ||||| |||||||||| |||| | |||||||| Sbjct: 249 cgggcgctgcgcgagctcgccgggaggtacggcgcgctcatgctgctccggttcggcgcc 308 Query: 270 gtgcccacgctcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgac 329 ||||| ||||||||||| || || || ||||| ||||||||||| | ||||| |||||| Sbjct: 309 gtgccgacgctcgtcgtgtcgtcggcggaggcggccagggaggtgctcaagacgcacgac 368 Query: 330 gccgccttcgccagccgccacctcagcgccacgctcgacatcatcagctgcggcggcaag 389 || |||||||||||||||| | | ||||||||| | || ||| | |||||||| | Sbjct: 369 gcgtgcttcgccagccgccacatgacgcccacgctcgccgtcttcacccgcggcggccgg 428 Query: 390 ggcatcctcttctccccctacaacgaccgctggcgcgagctccgcaggatctgcgtgctc 449 | ||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||| Sbjct: 429 gacatcctcttctccccctacggcgacctgtggcgccagctccggaggatctgcgtgctc 488 Query: 450 gagctcttcagccagcgccgcgtgc 474 |||||||||||| ||||||||||| Sbjct: 489 gagctcttcagcgcgcgccgcgtgc 513
>ref|NM_184832.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1539 Score = 176 bits (89), Expect = 4e-41 Identities = 286/349 (81%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 125 gcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctcctgct 184 ||||||||| || || || ||||| ||||||||| |||| ||||| |||||| ||||||| Sbjct: 126 gcggctgccgccggggccgtggcagctgccgctcgtcgggagcctgcaccacgtcctgct 185 Query: 185 gtcgcgctccggggacctgccccaccgggccatgcgcgacctatcccgcgcccacggccc 244 ||||||| || |||||||| ||| |||| ||||||| || || || ||||||| Sbjct: 186 gtcgcgccacgccgacctgccacacagggcgctgcgcgagctcgccggcaagtacggccc 245 Query: 245 gctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggccgc 304 ||||||| | |||| |||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 246 gctcatgatgctccgcttcggtgccgtgccgacgctcgtcgtgtcgtcggccgaggccgc 305 Query: 305 cagggaggtcatgaagacccacgacgccgccttcgccagccgccacctcagcgcc-acgc 363 ||||||||| | ||||| ||||||||||||||||||||||| |||||| |||| || | Sbjct: 306 cagggaggtgctcaagacgtacgacgccgccttcgccagccgctacctca-cgccgaccc 364 Query: 364 tcgacatcatcagctgcggcggcaagggcatcctcttctccccctacaacgaccgctggc 423 | | | || ||||| |||||||| | ||||||||||||||||||| ||||| |||| Sbjct: 365 tggccgtcctcagccgcggcggccgcgacatcctcttctccccctactgcgacctgtggc 424 Query: 424 gcgagctccgcaggatctgcgtgctcgagctcttcagccagcgccgcgt 472 || ||||||| ||||||||||||| ||||||| ||||| ||||||||| Sbjct: 425 gccagctccggaggatctgcgtgcacgagctcctcagcgcgcgccgcgt 473
>dbj|AK111441.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A07, full insert sequence Length = 2154 Score = 176 bits (89), Expect = 4e-41 Identities = 286/349 (81%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 125 gcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctcctgct 184 ||||||||| || || || ||||| ||||||||| |||| ||||| |||||| ||||||| Sbjct: 426 gcggctgccgccggggccgtggcagctgccgctcgtcgggagcctgcaccacgtcctgct 485 Query: 185 gtcgcgctccggggacctgccccaccgggccatgcgcgacctatcccgcgcccacggccc 244 ||||||| || |||||||| ||| |||| ||||||| || || || ||||||| Sbjct: 486 gtcgcgccacgccgacctgccacacagggcgctgcgcgagctcgccggcaagtacggccc 545 Query: 245 gctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggccgc 304 ||||||| | |||| |||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 546 gctcatgatgctccgcttcggtgccgtgccgacgctcgtcgtgtcgtcggccgaggccgc 605 Query: 305 cagggaggtcatgaagacccacgacgccgccttcgccagccgccacctcagcgcc-acgc 363 ||||||||| | ||||| ||||||||||||||||||||||| |||||| |||| || | Sbjct: 606 cagggaggtgctcaagacgtacgacgccgccttcgccagccgctacctca-cgccgaccc 664 Query: 364 tcgacatcatcagctgcggcggcaagggcatcctcttctccccctacaacgaccgctggc 423 | | | || ||||| |||||||| | ||||||||||||||||||| ||||| |||| Sbjct: 665 tggccgtcctcagccgcggcggccgcgacatcctcttctccccctactgcgacctgtggc 724 Query: 424 gcgagctccgcaggatctgcgtgctcgagctcttcagccagcgccgcgt 472 || ||||||| ||||||||||||| ||||||| ||||| ||||||||| Sbjct: 725 gccagctccggaggatctgcgtgcacgagctcctcagcgcgcgccgcgt 773
>ref|XM_472908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1530 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 243 ccgctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccga 298 ||||||||||| |||| |||||| ||||||| ||||||||||||||| ||||||| Sbjct: 214 ccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccga 269
>ref|XM_472907.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1557 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 243 ccgctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccga 298 ||||||||||| |||| |||||| ||||||| ||||||||||||||| ||||||| Sbjct: 217 ccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccga 272
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 243 ccgctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccga 298 ||||||||||| |||| |||||| ||||||| ||||||||||||||| ||||||| Sbjct: 23086 ccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccga 23031 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 243 ccgctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccga 298 ||||||||||| |||| |||||| ||||||| ||||||||||||||| ||||||| Sbjct: 19054 ccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccga 18999
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 243 ccgctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccga 298 ||||||||||| |||| |||||| ||||||| ||||||||||||||| ||||||| Sbjct: 24026107 ccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccga 24026052 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 243 ccgctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccga 298 ||||||||||| |||| |||||| ||||||| ||||||||||||||| ||||||| Sbjct: 24022075 ccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccga 24022020
>dbj|AK121175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082O06, full insert sequence Length = 1733 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 243 ccgctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccga 298 ||||||||||| |||| |||||| ||||||| ||||||||||||||| ||||||| Sbjct: 273 ccgctcatgctgctccgcctcggctccgtgccgacgctcgtcgtctccaccgccga 328
>ref|NM_189329.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1572 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 288 tcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgcca 342 |||||| | ||||| || |||||||| |||||||||||||||||||| ||||||| Sbjct: 262 tcctccccggaggcggcgagggaggtgatgaagacccacgacgccgcgttcgcca 316
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 288 tcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgcca 342 |||||| | ||||| || |||||||| |||||||||||||||||||| ||||||| Sbjct: 42198923 tcctccccggaggcggcgagggaggtgatgaagacccacgacgccgcgttcgcca 42198977 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 288 tcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgcca 342 |||||| | ||||| || |||||||| |||||||||||||||| ||| ||||||| Sbjct: 42204568 tcctccccggaggcggcgagggaggtgatgaagacccacgacgtcgcgttcgcca 42204622 Score = 48.1 bits (24), Expect = 0.027 Identities = 45/52 (86%) Strand = Plus / Minus Query: 207 caccgggccatgcgcgacctatcccgcgcccacggcccgctcatgctcctcc 258 ||||| || ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 15565430 caccgcgcgatgcgcgacctcgcccgccgccacggcccgctcatgctgctcc 15565379 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 443 cgtgctcgagctcttcagccagcgccgcgtgctctccttccg 484 ||||||| | ||| |||||| ||||||||| ||||||||||| Sbjct: 7052555 cgtgctccacctcctcagcccgcgccgcgtcctctccttccg 7052596 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 327 gacgccgccttcgccagccgccacctcagcgc 358 ||||||||||||||| |||||| |||| |||| Sbjct: 27261696 gacgccgccttcgcccgccgcctcctccgcgc 27261665
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 288 tcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgcca 342 |||||| | ||||| || |||||||| |||||||||||||||||||| ||||||| Sbjct: 72121 tcctccccggaggcggcgagggaggtgatgaagacccacgacgccgcgttcgcca 72175 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 288 tcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgcca 342 |||||| | ||||| || |||||||| |||||||||||||||| ||| ||||||| Sbjct: 77766 tcctccccggaggcggcgagggaggtgatgaagacccacgacgtcgcgttcgcca 77820
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 428 gctccgcaggatctgcgtgctcgagctcttcagc 461 |||||| ||||||||||||||||||||||||||| Sbjct: 53703 gctccgaaggatctgcgtgctcgagctcttcagc 53736
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 428 gctccgcaggatctgcgtgctcgagctcttcagc 461 |||||| ||||||||||||||||||||||||||| Sbjct: 12632683 gctccgaaggatctgcgtgctcgagctcttcagc 12632716
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 428 gctccgcaggatctgcgtgctcgagctcttcagc 461 |||||| ||||||||||||||||||||||||||| Sbjct: 98621 gctccgaaggatctgcgtgctcgagctcttcagc 98654
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 428 gctccgcaggatctgcgtgctcgagctcttcagc 461 |||||| ||||||||||||||||||||||||||| Sbjct: 148010 gctccgaaggatctgcgtgctcgagctcttcagc 148043
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 306 agggaggtcatgaagacccacgacgccgccttcgcca 342 |||||||| |||| ||||||||||||||||||||||| Sbjct: 25777524 agggaggtgatgaggacccacgacgccgccttcgcca 25777488 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 123 cagcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctc 179 ||||||||||| ||||| |||||||| |||||| |||| ||||| || ||||||||| Sbjct: 25651352 cagcggctgcctcccgggccatggcagctgccggtcattggcagtcttcaccacctc 25651408 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 141 ccatggcaactgccgctcatcggcagcctacaccacctc 179 |||||||| |||||| ||||||||||||| ||||||||| Sbjct: 25777677 ccatggcagctgccggtcatcggcagcctgcaccacctc 25777639 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 125 gcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctc 179 ||||||||| || || || ||||| |||||| ||||||||||||| ||||||||| Sbjct: 25698855 gcggctgccgccagggccgtggcagctgccggtcatcggcagcctgcaccacctc 25698909 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 141 ccatggcaactgccgctcatcggcagcctacaccacctc 179 |||||||| |||||| ||||||||||||| ||||||||| Sbjct: 25688849 ccatggcagctgccggtcatcggcagcctgcaccacctc 25688887 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 300 gccgccagggaggtcatgaagacccacgacgccgccttcgccagccgc 347 |||||| |||||||| ||| ||| ||||||||||| ||||||| |||| Sbjct: 27464282 gccgcccgggaggtcctgaggacgcacgacgccgcgttcgccacccgc 27464235 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 236 ccacggcccgctcatgctcctccagctcggcg 267 |||||||||||||||||| |||| |||||||| Sbjct: 25715002 ccacggcccgctcatgctgctccggctcggcg 25714971 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 153 ccgctcatcggcagcctacaccacct 178 ||||||||||||||||| |||||||| Sbjct: 17414045 ccgctcatcggcagcctccaccacct 17414020 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 ccgctcatcggcagcctacaccacct 178 ||||||||||||||||| |||||||| Sbjct: 17208697 ccgctcatcggcagcctccaccacct 17208722 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 249 atgctcctccagctcggcgccgtgcc 274 ||||||||||| |||||||||||||| Sbjct: 12594758 atgctcctccacctcggcgccgtgcc 12594783 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Minus Query: 255 ctccagctcggcgccgtgcccacgctcgtcgtctcctc 292 |||| ||||||| |||||| | |||||||||||||||| Sbjct: 8888337 ctccggctcggctccgtgcgcgcgctcgtcgtctcctc 8888300 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 ggcatcctcttctccccctac 410 ||||||||||||||||||||| Sbjct: 25772913 ggcatcctcttctccccctac 25772933 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 280 tcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcg 339 |||||| ||||||||| || ||||| | || ||||||||||| |||||| |||||||| Sbjct: 25753624 tcgtcgcctcctccgcggacgccgcgcgcgacgtcatgaagacgcacgacctcgccttcg 25753683 Query: 340 c 340 | Sbjct: 25753684 c 25753684 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 217 tgcgcgacctatcccgcgcccacggcccgctcatgctcctc 257 |||||||||| ||||| ||||||||| |||||||||||| Sbjct: 17413990 tgcgcgacctggcccgccgccacggccccctcatgctcctc 17413950 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 236 ccacggcccgctcatgctcctccagctcggcg 267 |||||||||||||||||| |||| ||||||| Sbjct: 25723351 ccacggcccgctcatgctgctccgcctcggcg 25723320 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 247 tcatgctcctccagctcggcgccgtgcccacgctcgtcgt 286 ||||||| |||| | |||||| ||||||||||||||||| Sbjct: 25709093 tcatgctgctccggatcggcgaggtgcccacgctcgtcgt 25709132 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 tctgcgtgctcgagctcttcagcc 462 ||||||||||| |||||||||||| Sbjct: 13994972 tctgcgtgctcaagctcttcagcc 13994949 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gctcctccagctcggcgccg 270 |||||||||||||||||||| Sbjct: 8997503 gctcctccagctcggcgccg 8997484
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 123 cagcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctc 179 ||||||||||| ||||| |||||||| |||||| |||| ||||| || ||||||||| Sbjct: 74797 cagcggctgcctcccgggccatggcagctgccggtcattggcagtcttcaccacctc 74853 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 125 gcggctgccacccggcccatggcaactgccgctcatcggcagcctacaccacctc 179 ||||||||| || || || ||||| |||||| ||||||||||||| ||||||||| Sbjct: 122300 gcggctgccgccagggccgtggcagctgccggtcatcggcagcctgcaccacctc 122354 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 141 ccatggcaactgccgctcatcggcagcctacaccacctc 179 |||||||| |||||| ||||||||||||| ||||||||| Sbjct: 112294 ccatggcagctgccggtcatcggcagcctgcaccacctc 112332 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 236 ccacggcccgctcatgctcctccagctcggcg 267 |||||||||||||||||| |||| |||||||| Sbjct: 138447 ccacggcccgctcatgctgctccggctcggcg 138416 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 236 ccacggcccgctcatgctcctccagctcggcg 267 |||||||||||||||||| |||| ||||||| Sbjct: 146796 ccacggcccgctcatgctgctccgcctcggcg 146765 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 247 tcatgctcctccagctcggcgccgtgcccacgctcgtcgt 286 ||||||| |||| | |||||| ||||||||||||||||| Sbjct: 132538 tcatgctgctccggatcggcgaggtgcccacgctcgtcgt 132577
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 306 agggaggtcatgaagacccacgacgccgccttcgcca 342 |||||||| |||| ||||||||||||||||||||||| Sbjct: 59728 agggaggtgatgaggacccacgacgccgccttcgcca 59692 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 141 ccatggcaactgccgctcatcggcagcctacaccacctc 179 |||||||| |||||| ||||||||||||| ||||||||| Sbjct: 59881 ccatggcagctgccggtcatcggcagcctgcaccacctc 59843 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 ggcatcctcttctccccctac 410 ||||||||||||||||||||| Sbjct: 55117 ggcatcctcttctccccctac 55137 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 280 tcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcg 339 |||||| ||||||||| || ||||| | || ||||||||||| |||||| |||||||| Sbjct: 35828 tcgtcgcctcctccgcggacgccgcgcgcgacgtcatgaagacgcacgacctcgccttcg 35887 Query: 340 c 340 | Sbjct: 35888 c 35888 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 236 ccacggcccgctcatgctcctccagctcggcg 267 |||||||||||||||||| |||| ||||||| Sbjct: 5555 ccacggcccgctcatgctgctccgcctcggcg 5524
>ref|XM_469015.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1831 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 282 gtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgcc 341 |||| ||||||||||| ||||||||| ||| | |||||||||||||||||||||||| Sbjct: 247 gtcgcctcctccgccggcgccgccaggctcgtcctcaagacccacgacgccgccttcgcc 306
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 282 gtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgcc 341 |||| ||||||||||| ||||||||| ||| | |||||||||||||||||||||||| Sbjct: 51321 gtcgcctcctccgccggcgccgccaggctcgtcctcaagacccacgacgccgccttcgcc 51262
>ref|XM_479695.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1587 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 246 ctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctc 292 ||||||||| |||| |||||| |||| ||||| |||||||||||||| Sbjct: 280 ctcatgctcgtccacctcggctccgtccccaccctcgtcgtctcctc 326
>ref|NM_189330.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1659 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 288 tcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgcca 342 |||||| | ||||| || |||||||| |||||||||||||||| ||| ||||||| Sbjct: 352 tcctccccggaggcggcgagggaggtgatgaagacccacgacgtcgcgttcgcca 406
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 435 aggatctgcgtgctcgagctcttcagc 461 ||||||||||||||||||||||||||| Sbjct: 83262 aggatctgcgtgctcgagctcttcagc 83236
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 435 aggatctgcgtgctcgagctcttcagc 461 ||||||||||||||||||||||||||| Sbjct: 19822224 aggatctgcgtgctcgagctcttcagc 19822198 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacacc 174 |||||||||||||||||||| |||| Sbjct: 4096205 ctgccgctcatcggcagcctgcacc 4096229 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gctcctccagctcggcgccg 270 |||||||||||||||||||| Sbjct: 21854299 gctcctccagctcggcgccg 21854318 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cagctgcggcggcaagggca 393 |||||||||||||||||||| Sbjct: 11838848 cagctgcggcggcaagggca 11838867
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 246 ctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctc 292 ||||||||| |||| |||||| |||| ||||| |||||||||||||| Sbjct: 302128 ctcatgctcgtccacctcggctccgtccccaccctcgtcgtctcctc 302174 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 cacgacgccgccttcgccagccgc 347 ||||||||||||||||| |||||| Sbjct: 7709998 cacgacgccgccttcgcgagccgc 7709975 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcatgctcctccagctcggc 266 |||||||||||||||||||| Sbjct: 297181 tcatgctcctccagctcggc 297162
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 282 gtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgc 340 |||| ||| |||||||| |||||||||||| |||||| ||| ||||||| ||| ||||| Sbjct: 4774594 gtcgcctcgtccgccgacgccgccagggagatcatgaggacgcacgacgtcgcgttcgc 4774652 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 428 gctccgcaggatctgcgtgctcgagctcttcagc 461 |||||| ||||||||| ||||||||||||||||| Sbjct: 26265541 gctccgaaggatctgcatgctcgagctcttcagc 26265508 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 280 tcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcg 339 |||||| ||| |||||||| |||||||||||| ||| ||||| ||||||| ||| |||| Sbjct: 4769108 tcgtcgcctcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcg 4769167 Query: 340 c 340 | Sbjct: 4769168 c 4769168 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 237 cacggcccgctcatgctcctccagctcggcg 267 ||||||||||||||||| |||| |||||||| Sbjct: 4828869 cacggcccgctcatgctgctccggctcggcg 4828899 Score = 44.1 bits (22), Expect = 0.42 Identities = 79/98 (80%) Strand = Plus / Minus Query: 243 ccgctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggcc 302 |||||||||| |||||||||||||| ||| ||| |||||| |||||| |||| ||| Sbjct: 23552433 ccgctcatgcgcctccagctcggcggcgtccccgtcgtcgtcgcgtcctcccccgacgcc 23552374 Query: 303 gccagggaggtcatgaagacccacgacgccgccttcgc 340 ||| | ||||| | | || ||||||||||||||||| Sbjct: 23552373 gcccgcgaggtgacgtgcacgcacgacgccgccttcgc 23552336 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 150 ctgccgctcatcggcagcctacaccacctc 179 |||||||| ||||||||||| ||||||||| Sbjct: 21832667 ctgccgctgatcggcagcctccaccacctc 21832638 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacaccacctc 179 |||||||| ||||||||||| ||||||||| Sbjct: 21807654 ctgccgctgatcggcagcctccaccacctc 21807683 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 243 ccgctcatgctcctccagctcggcg 267 |||||||||| |||||||||||||| Sbjct: 23556108 ccgctcatgcgcctccagctcggcg 23556084 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 tcatcggcagcctacaccacctcct 181 ||||||||||||| ||||||||||| Sbjct: 10261280 tcatcggcagcctccaccacctcct 10261304 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 280 tcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcg 339 |||||| ||| |||||| | |||||||||||| ||| ||||| ||||||| ||| |||| Sbjct: 4754443 tcgtcgcctcatccgccaacgccgccagggagatcaccaagacgcacgacgtcgcgttcg 4754502 Query: 340 c 340 | Sbjct: 4754503 c 4754503 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacac 173 |||||||||||||||| ||||||| Sbjct: 21709993 ctgccgctcatcggcaacctacac 21710016 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 tcatgaagacccacgacgccgccttcgc 340 |||||| ||||||||||||||| ||||| Sbjct: 4826700 tcatgaggacccacgacgccgcgttcgc 4826727
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 282 gtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgc 340 |||| ||| |||||||| |||||||||||| |||||| ||| ||||||| ||| ||||| Sbjct: 55184 gtcgcctcgtccgccgacgccgccagggagatcatgaggacgcacgacgtcgcgttcgc 55242 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 280 tcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcg 339 |||||| ||| |||||||| |||||||||||| ||| ||||| ||||||| ||| |||| Sbjct: 49698 tcgtcgcctcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcg 49757 Query: 340 c 340 | Sbjct: 49758 c 49758 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 237 cacggcccgctcatgctcctccagctcggcg 267 ||||||||||||||||| |||| |||||||| Sbjct: 109459 cacggcccgctcatgctgctccggctcggcg 109489 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 280 tcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcg 339 |||||| ||| |||||| | |||||||||||| ||| ||||| ||||||| ||| |||| Sbjct: 35033 tcgtcgcctcatccgccaacgccgccagggagatcaccaagacgcacgacgtcgcgttcg 35092 Query: 340 c 340 | Sbjct: 35093 c 35093 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 tcatgaagacccacgacgccgccttcgc 340 |||||| ||||||||||||||| ||||| Sbjct: 107290 tcatgaggacccacgacgccgcgttcgc 107317
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 282 gtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcgc 340 |||| ||| |||||||| |||||||||||| |||||| ||| ||||||| ||| ||||| Sbjct: 16753 gtcgcctcgtccgccgacgccgccagggagatcatgaggacgcacgacgtcgcgttcgc 16811 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 280 tcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcg 339 |||||| ||| |||||||| |||||||||||| ||| ||||| ||||||| ||| |||| Sbjct: 11267 tcgtcgcctcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcg 11326 Query: 340 c 340 | Sbjct: 11327 c 11327 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 237 cacggcccgctcatgctcctccagctcggcg 267 ||||||||||||||||| |||| |||||||| Sbjct: 71028 cacggcccgctcatgctgctccggctcggcg 71058 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 tcatgaagacccacgacgccgccttcgc 340 |||||| ||||||||||||||| ||||| Sbjct: 68859 tcatgaggacccacgacgccgcgttcgc 68886
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 246 ctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctc 292 ||||||||| |||| |||||| |||| ||||| |||||||||||||| Sbjct: 11642 ctcatgctcgtccacctcggctccgtccccaccctcgtcgtctcctc 11688 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcatgctcctccagctcggc 266 |||||||||||||||||||| Sbjct: 6695 tcatgctcctccagctcggc 6676
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 246 ctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctc 292 ||||||||| |||| |||||| |||| ||||| |||||||||||||| Sbjct: 68554 ctcatgctcgtccacctcggctccgtccccaccctcgtcgtctcctc 68600 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tcatgctcctccagctcggc 266 |||||||||||||||||||| Sbjct: 63607 tcatgctcctccagctcggc 63588
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 435 aggatctgcgtgctcgagctcttcagc 461 ||||||||||||||||||||||||||| Sbjct: 19833500 aggatctgcgtgctcgagctcttcagc 19833474 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacacc 174 |||||||||||||||||||| |||| Sbjct: 4097026 ctgccgctcatcggcagcctgcacc 4097050 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gctcctccagctcggcgccg 270 |||||||||||||||||||| Sbjct: 21865962 gctcctccagctcggcgccg 21865981 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cagctgcggcggcaagggca 393 |||||||||||||||||||| Sbjct: 11846188 cagctgcggcggcaagggca 11846207
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 428 gctccgcaggatctgcgtgctcgagctcttcagc 461 |||||| ||||||||| ||||||||||||||||| Sbjct: 88382 gctccgaaggatctgcatgctcgagctcttcagc 88349
>ref|NM_193877.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1557 Score = 48.1 bits (24), Expect = 0.027 Identities = 45/52 (86%) Strand = Plus / Plus Query: 207 caccgggccatgcgcgacctatcccgcgcccacggcccgctcatgctcctcc 258 ||||| || ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 175 caccgcgcgatgcgcgacctcgcccgccgccacggcccgctcatgctgctcc 226
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 48.1 bits (24), Expect = 0.027 Identities = 45/52 (86%) Strand = Plus / Minus Query: 207 caccgggccatgcgcgacctatcccgcgcccacggcccgctcatgctcctcc 258 ||||| || ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 122939 caccgcgcgatgcgcgacctcgcccgccgccacggcccgctcatgctgctcc 122888
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 48.1 bits (24), Expect = 0.027 Identities = 45/52 (86%) Strand = Plus / Minus Query: 207 caccgggccatgcgcgacctatcccgcgcccacggcccgctcatgctcctcc 258 ||||| || ||||||||||| ||||| |||||||||||||||||| |||| Sbjct: 3327 caccgcgcgatgcgcgacctcgcccgccgccacggcccgctcatgctgctcc 3276
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 300 gccgccagggaggtcatgaagacccacgacgccgccttcgccagccgc 347 |||||| |||||||| ||| ||| ||||||||||| ||||||| |||| Sbjct: 33840 gccgcccgggaggtcctgaggacgcacgacgccgcgttcgccacccgc 33793
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 300 gccgccagggaggtcatgaagacccacgacgccgccttcgccagccgc 347 |||||| |||||||| ||| ||| ||||||||||| ||||||| |||| Sbjct: 83351 gccgcccgggaggtcctgaggacgcacgacgccgcgttcgccacccgc 83304
>emb|AL611986.15| Mouse DNA sequence from clone RP23-74I9 on chromosome 15, complete sequence Length = 191808 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 cgccagggaggtcatgaagaccca 325 |||||||||||||||||||||||| Sbjct: 150640 cgccagggaggtcatgaagaccca 150617
>ref|XM_464380.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1572 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 237 cacggcccgctcatgctcctccagctcggcg 267 ||||||||||||||||| |||| |||||||| Sbjct: 202 cacggcccgctcatgctgctccggctcggcg 232
>ref|NM_188578.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1737 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 443 cgtgctcgagctcttcagccagcgccgcgtgctctccttccg 484 ||||||| | ||| |||||| ||||||||| ||||||||||| Sbjct: 438 cgtgctccacctcctcagcccgcgccgcgtcctctccttccg 479
>ref|XM_466583.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1512 Score = 44.1 bits (22), Expect = 0.42 Identities = 79/98 (80%) Strand = Plus / Plus Query: 243 ccgctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggcc 302 |||||||||| |||||||||||||| ||| ||| |||||| |||||| |||| ||| Sbjct: 238 ccgctcatgcgcctccagctcggcggcgtccccgtcgtcgtcgcgtcctcccccgacgcc 297 Query: 303 gccagggaggtcatgaagacccacgacgccgccttcgc 340 ||| | ||||| | | || ||||||||||||||||| Sbjct: 298 gcccgcgaggtgacgtgcacgcacgacgccgccttcgc 335
>ref|XM_466347.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1846 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacaccacctc 179 |||||||| ||||||||||| ||||||||| Sbjct: 184 ctgccgctgatcggcagcctccaccacctc 213
>ref|XM_466343.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1728 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacaccacctc 179 |||||||| ||||||||||| ||||||||| Sbjct: 92 ctgccgctgatcggcagcctccaccacctc 121
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 255 ctccagctcggcgccgtgcccacgctcgtcgtctcctc 292 |||| ||||||| |||||| | |||||||||||||||| Sbjct: 77785 ctccggctcggctccgtgcgcgcgctcgtcgtctcctc 77822
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 392 catcctcttctccccctacaacgaccgctggcgcgagctccgcagg 437 ||||||||||||||||| | |||| ||||||| ||||||||||| Sbjct: 27488786 catcctcttctccccctccggcgactactggcgcaagctccgcagg 27488741 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cagctgcggcggcaagggca 393 |||||||||||||||||||| Sbjct: 5288071 cagctgcggcggcaagggca 5288090
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 255 ctccagctcggcgccgtgcccacgctcgtcgtctcctc 292 |||| ||||||| |||||| | |||||||||||||||| Sbjct: 25343181 ctccggctcggctccgtgcgcgcgctcgtcgtctcctc 25343218 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cagctgcggcggcaagggca 393 |||||||||||||||||||| Sbjct: 12714895 cagctgcggcggcaagggca 12714914 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gctcctccagctcggcgccg 270 |||||||||||||||||||| Sbjct: 9245275 gctcctccagctcggcgccg 9245294
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 443 cgtgctcgagctcttcagccagcgccgcgtgctctccttccg 484 ||||||| | ||| |||||| ||||||||| ||||||||||| Sbjct: 40135 cgtgctccacctcctcagcccgcgccgcgtcctctccttccg 40176
>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528B02 Length = 144495 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Minus Query: 255 ctccagctcggcgccgtgcccacgctcgtcgtctcctc 292 |||| ||||||| |||||| | |||||||||||||||| Sbjct: 53966 ctccggctcggctccgtgcgcgcgctcgtcgtctcctc 53929
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 249 atgctcctccagctcggcgccgtgcc 274 ||||||||||| |||||||||||||| Sbjct: 77071 atgctcctccacctcggcgccgtgcc 77096
>dbj|AP004688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036C11 Length = 137995 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 ccgctcatcggcagcctacaccacct 178 ||||||||||||||||| |||||||| Sbjct: 57424 ccgctcatcggcagcctccaccacct 57449
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 153 ccgctcatcggcagcctacaccacct 178 ||||||||||||||||| |||||||| Sbjct: 45086 ccgctcatcggcagcctccaccacct 45061 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 217 tgcgcgacctatcccgcgcccacggcccgctcatgctcctc 257 |||||||||| ||||| ||||||||| |||||||||||| Sbjct: 45031 tgcgcgacctggcccgccgccacggccccctcatgctcctc 44991
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 44.1 bits (22), Expect = 0.42 Identities = 79/98 (80%) Strand = Plus / Minus Query: 243 ccgctcatgctcctccagctcggcgccgtgcccacgctcgtcgtctcctccgccgaggcc 302 |||||||||| |||||||||||||| ||| ||| |||||| |||||| |||| ||| Sbjct: 118116 ccgctcatgcgcctccagctcggcggcgtccccgtcgtcgtcgcgtcctcccccgacgcc 118057 Query: 303 gccagggaggtcatgaagacccacgacgccgccttcgc 340 ||| | ||||| | | || ||||||||||||||||| Sbjct: 118056 gcccgcgaggtgacgtgcacgcacgacgccgccttcgc 118019 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 243 ccgctcatgctcctccagctcggcg 267 |||||||||| |||||||||||||| Sbjct: 121791 ccgctcatgcgcctccagctcggcg 121767
>dbj|AP005835.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008E01 Length = 156856 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 150 ctgccgctcatcggcagcctacaccacctc 179 |||||||| ||||||||||| ||||||||| Sbjct: 125066 ctgccgctgatcggcagcctccaccacctc 125037 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacaccacctc 179 |||||||| ||||||||||| ||||||||| Sbjct: 100053 ctgccgctgatcggcagcctccaccacctc 100082 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacac 173 |||||||||||||||| ||||||| Sbjct: 2392 ctgccgctcatcggcaacctacac 2415
>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689H05 Length = 135803 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 150 ctgccgctcatcggcagcctacaccacctc 179 |||||||| ||||||||||| ||||||||| Sbjct: 15952 ctgccgctgatcggcagcctccaccacctc 15923
>dbj|AK120914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034H03, full insert sequence Length = 1890 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Plus Query: 443 cgtgctcgagctcttcagccagcgccgcgtgctctccttccg 484 ||||||| | ||| |||||| ||||||||| ||||||||||| Sbjct: 457 cgtgctccacctcctcagcccgcgccgcgtcctctccttccg 498
>dbj|AK107418.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-F04, full insert sequence Length = 1728 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacaccacctc 179 |||||||| ||||||||||| ||||||||| Sbjct: 92 ctgccgctgatcggcagcctccaccacctc 121
>dbj|AK070167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042H13, full insert sequence Length = 1846 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacaccacctc 179 |||||||| ||||||||||| ||||||||| Sbjct: 184 ctgccgctgatcggcagcctccaccacctc 213
>dbj|AK062293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F01, full insert sequence Length = 2395 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 255 ctccagctcggcgccgtgcccacgctcgtcgtctcctc 292 |||| ||||||| |||||| | |||||||||||||||| Sbjct: 272 ctccggctcggctccgtgcgcgcgctcgtcgtctcctc 309
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 392 catcctcttctccccctacaacgaccgctggcgcgagctccgcagg 437 ||||||||||||||||| | |||| ||||||| ||||||||||| Sbjct: 27414386 catcctcttctccccctccggcgactactggcgcaagctccgcagg 27414341 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cagctgcggcggcaagggca 393 |||||||||||||||||||| Sbjct: 5288053 cagctgcggcggcaagggca 5288072
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 392 catcctcttctccccctacaacgaccgctggcgcgagctccgcagg 437 ||||||||||||||||| | |||| ||||||| ||||||||||| Sbjct: 64700 catcctcttctccccctccggcgactactggcgcaagctccgcagg 64655
>emb|BX664710.2|CNS09SC0 Oryza sativa chromosome 12, . PAC P0243A04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 78611 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Plus Query: 392 catcctcttctccccctacaacgaccgctggcgcgagctccgcagg 437 ||||||||||||||||| | |||| ||||||| ||||||||||| Sbjct: 78209 catcctcttctccccctccggcgactactggcgcaagctccgcagg 78254
>ref|NM_195001.1| Oryza sativa (japonica cultivar-group) putative cytochrome P-450 (OSJNBa0089D15.20), mRNA Length = 1260 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacacc 174 |||||||||||||||||||| |||| Sbjct: 112 ctgccgctcatcggcagcctgcacc 136
>ref|XM_466584.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1581 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 243 ccgctcatgctcctccagctcggcg 267 |||||||||| |||||||||||||| Sbjct: 211 ccgctcatgcgcctccagctcggcg 235
>ref|XM_464368.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1674 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 280 tcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcg 339 |||||| ||| |||||| | |||||||||||| ||| ||||| ||||||| ||| |||| Sbjct: 275 tcgtcgcctcatccgccaacgccgccagggagatcaccaagacgcacgacgtcgcgttcg 334 Query: 340 c 340 | Sbjct: 335 c 335
>ref|XM_463099.1| Oryza sativa (japonica cultivar-group), mRNA Length = 435 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 295 ccgaggccgccagggaggtcatgaagacccacgacgccgcc 335 |||| |||||||||||||| | ||||| |||||||||||| Sbjct: 47 ccgacgccgccagggaggtgctcaagacgcacgacgccgcc 87
>gb|AC148870.2| Chlamydomonas reinhardtii clone cr-13O11, complete sequence Length = 56858 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 243 ccgctcatgctcctccagctcggcg 267 |||||| |||||||||||||||||| Sbjct: 14817 ccgctcctgctcctccagctcggcg 14793
>gb|AC165361.3| Mus musculus BAC clone RP23-77H6 from chromosome 17, complete sequence Length = 228753 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 cttttcctcttcttcgctctc 74 ||||||||||||||||||||| Sbjct: 48510 cttttcctcttcttcgctctc 48490
>gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genomic sequence, complete sequence Length = 163108 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 295 ccgaggccgccagggaggtcatgaagacccacgacgccgcc 335 |||| |||||||||||||| | ||||| |||||||||||| Sbjct: 160038 ccgacgccgccagggaggtgctcaagacgcacgacgccgcc 159998
>gb|AF321858.1|AF321858 Lolium rigidum clone BXH putative cytochrome P450 mRNA, complete cds Length = 1865 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 249 atgctcctccagctcggcgccgtgcccac 277 |||||||||| ||||||||||||||||| Sbjct: 289 atgctcctccgcctcggcgccgtgcccac 317
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0089D15, from Chromosome 10, complete sequence Length = 164679 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacacc 174 |||||||||||||||||||| |||| Sbjct: 93034 ctgccgctcatcggcagcctgcacc 93058
>gb|AY462229.1| Hordeum lechleri Bx4-like protein mRNA, complete cds Length = 1807 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 246 ctcatgctcctccagctcggcgccgtgcccacgctcgtcgt 286 ||||||||| |||| |||||||||||||||| ||||||| Sbjct: 282 ctcatgctcgtccatgtcggcgccgtgcccaccgtcgtcgt 322
>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055M07 Length = 150901 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 tcatcggcagcctacaccacctcct 181 ||||||||||||| ||||||||||| Sbjct: 133646 tcatcggcagcctccaccacctcct 133670
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 tcatcggcagcctacaccacctcct 181 ||||||||||||| ||||||||||| Sbjct: 27090 tcatcggcagcctccaccacctcct 27114
>dbj|AK107034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-B07, full insert sequence Length = 1674 Score = 42.1 bits (21), Expect = 1.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 280 tcgtcgtctcctccgccgaggccgccagggaggtcatgaagacccacgacgccgccttcg 339 |||||| ||| |||||| | |||||||||||| ||| ||||| ||||||| ||| |||| Sbjct: 275 tcgtcgcctcatccgccaacgccgccagggagatcaccaagacgcacgacgtcgcgttcg 334 Query: 340 c 340 | Sbjct: 335 c 335
>dbj|AK072307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020N11, full insert sequence Length = 2010 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 ggcatcctcttctccccctac 410 ||||||||||||||||||||| Sbjct: 666 ggcatcctcttctccccctac 686
>dbj|AK067549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111A01, full insert sequence Length = 3688 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 tcatcggcagcctacaccacctcct 181 ||||||||||||| ||||||||||| Sbjct: 185 tcatcggcagcctccaccacctcct 209
>dbj|AK067059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090O06, full insert sequence Length = 2127 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 ggcatcctcttctccccctac 410 ||||||||||||||||||||| Sbjct: 645 ggcatcctcttctccccctac 665
>dbj|AK065204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F08, full insert sequence Length = 1769 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 tcatcggcagcctacaccacctcct 181 ||||||||||||| ||||||||||| Sbjct: 159 tcatcggcagcctccaccacctcct 183
>emb|CT033147.1| Platynereis dumerilii EST IB0AAA25DH07EM1 Length = 905 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 cttttcctcttcttcgctctc 74 ||||||||||||||||||||| Sbjct: 890 cttttcctcttcttcgctctc 870
>emb|CT033146.1| Platynereis dumerilii EST IB0AAA25DH07FM1 Length = 852 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 cttttcctcttcttcgctctc 74 ||||||||||||||||||||| Sbjct: 363 cttttcctcttcttcgctctc 383
>gb|AC171405.1| Mus musculus BAC clone RP23-103K10 from chromosome 17, complete sequence Length = 181342 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 cttttcctcttcttcgctctc 74 ||||||||||||||||||||| Sbjct: 175157 cttttcctcttcttcgctctc 175137
>dbj|AB005226.1| Mus musculus gene for hyaluronan synthase 1, 5' flanking region and partial cds Length = 1588 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 cttttcctcttcttcgctctc 74 ||||||||||||||||||||| Sbjct: 1112 cttttcctcttcttcgctctc 1092
>ref|XM_479693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1395 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tcatgctcctccagctcggc 266 |||||||||||||||||||| Sbjct: 514 tcatgctcctccagctcggc 533
>ref|XM_479692.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2151 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tcatgctcctccagctcggc 266 |||||||||||||||||||| Sbjct: 514 tcatgctcctccagctcggc 533
>ref|XM_507697.1| PREDICTED: Pan troglodytes similar to KIAA1217 (LOC450353), mRNA Length = 5685 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcaaactggtcatcggtcgc 101 |||||||||||||||||||| Sbjct: 5009 tcaaactggtcatcggtcgc 4990
>ref|XM_466327.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1737 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacac 173 |||||||||||||||| ||||||| Sbjct: 224 ctgccgctcatcggcaacctacac 247
>ref|XM_464379.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1557 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 tcatgaagacccacgacgccgccttcgc 340 |||||| ||||||||||||||| ||||| Sbjct: 290 tcatgaggacccacgacgccgcgttcgc 317
>ref|NM_197786.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0057L21.27), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gctcctccagctcggcgccg 270 |||||||||||||||||||| Sbjct: 616 gctcctccagctcggcgccg 597
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gctcctccagctcggcgccg 270 |||||||||||||||||||| Sbjct: 17220 gctcctccagctcggcgccg 17239
>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009N21, complete sequence Length = 164925 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gctcctccagctcggcgccg 270 |||||||||||||||||||| Sbjct: 121930 gctcctccagctcggcgccg 121949
>ref|XM_716015.1| Candida albicans SC5314 putative nonsense-mediated mRNA decay factor (CaO19_8483), mRNA Length = 3105 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tcttcttcgctctcgtcatc 80 |||||||||||||||||||| Sbjct: 2687 tcttcttcgctctcgtcatc 2668
>ref|XM_715894.1| Candida albicans SC5314 putative nonsense-mediated mRNA decay factor (CaO19_864), mRNA Length = 3105 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tcttcttcgctctcgtcatc 80 |||||||||||||||||||| Sbjct: 2687 tcttcttcgctctcgtcatc 2668
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cagctgcggcggcaagggca 393 |||||||||||||||||||| Sbjct: 12354 cagctgcggcggcaagggca 12373
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cagctgcggcggcaagggca 393 |||||||||||||||||||| Sbjct: 85182 cagctgcggcggcaagggca 85201
>emb|AL392104.19| Human DNA sequence from clone RP11-324E23 on chromosome 10 Contains the 3' end of a novel gene (DKFZp761L0424) (KIAA1217), the 3' end of the gene for Rho-GTPase activating protein 10 (ARHGAP10) and a CpG island, complete sequence Length = 166643 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcaaactggtcatcggtcgc 101 |||||||||||||||||||| Sbjct: 1212 tcaaactggtcatcggtcgc 1193
>emb|AL353583.15| Human DNA sequence from clone RP11-144I2 on chromosome 10 Contains part of a novel gene (DKFZp761L0424) (KIAA1217), complete sequence Length = 118906 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcaaactggtcatcggtcgc 101 |||||||||||||||||||| Sbjct: 118118 tcaaactggtcatcggtcgc 118099
>ref|XM_969811.1| PREDICTED: Tribolium castaneum similar to CG13363-PA (LOC663776), mRNA Length = 2103 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gctgcttttcctcttcttcg 69 |||||||||||||||||||| Sbjct: 490 gctgcttttcctcttcttcg 471
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 367 acatcatcagctgcggcggcaagggcat 394 ||||||||||| ||||||||||| |||| Sbjct: 723932 acatcatcagcagcggcggcaagcgcat 723959
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 gctcctccagctcggcgccgtgcc 274 ||||||||||||||||| |||||| Sbjct: 178814 gctcctccagctcggcggcgtgcc 178837
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cagctgcggcggcaagggca 393 |||||||||||||||||||| Sbjct: 156909 cagctgcggcggcaagggca 156928
>dbj|AK125675.1| Homo sapiens cDNA FLJ43687 fis, clone TBAES2002197 Length = 1811 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcaaactggtcatcggtcgc 101 |||||||||||||||||||| Sbjct: 960 tcaaactggtcatcggtcgc 941
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 tcgtctcctccgccgaggccgcca 306 ||||||||| |||||||||||||| Sbjct: 3930443 tcgtctccttcgccgaggccgcca 3930420 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gaggtcatgaagacccacgacgcc 332 ||||||||||||||||||| |||| Sbjct: 1976714 gaggtcatgaagacccacgccgcc 1976691
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 cagctgcggcggcaagggca 393 |||||||||||||||||||| Sbjct: 75471 cagctgcggcggcaagggca 75452
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gctcctccagctcggcgccg 270 |||||||||||||||||||| Sbjct: 154022 gctcctccagctcggcgccg 154003
>ref|NM_019590.2| Homo sapiens KIAA1217 (KIAA1217), mRNA Length = 7385 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcaaactggtcatcggtcgc 101 |||||||||||||||||||| Sbjct: 4730 tcaaactggtcatcggtcgc 4711
>ref|XM_697136.1| PREDICTED: Danio rerio hypothetical protein LOC554376 (LOC554376), mRNA Length = 3286 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tcgtcatcctcaaactggtc 92 |||||||||||||||||||| Sbjct: 2876 tcgtcatcctcaaactggtc 2857
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 gcgccacgctcgacatcatc 374 |||||||||||||||||||| Sbjct: 1278902 gcgccacgctcgacatcatc 1278883
>gb|AE004895.1| Pseudomonas aeruginosa PAO1, section 456 of 529 of the complete genome Length = 12211 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 cgccttcgccagccgccacc 351 |||||||||||||||||||| Sbjct: 321 cgccttcgccagccgccacc 340
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 327 gacgccgccttcgccagccgccacctcagcgc 358 ||||||||||||||| |||||| |||| |||| Sbjct: 42213 gacgccgccttcgcccgccgcctcctccgcgc 42182
>gb|BC045300.1| Danio rerio vesicle docking protein p115, mRNA (cDNA clone MGC:55298 IMAGE:2600261), complete cds Length = 3297 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tcgtcatcctcaaactggtc 92 |||||||||||||||||||| Sbjct: 2876 tcgtcatcctcaaactggtc 2857
>ref|NM_200155.1| Danio rerio vesicle docking protein p115 (vdp), mRNA Length = 3297 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tcgtcatcctcaaactggtc 92 |||||||||||||||||||| Sbjct: 2876 tcgtcatcctcaaactggtc 2857
>dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031J07 Length = 172511 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 tctgcgtgctcgagctcttcagcc 462 ||||||||||| |||||||||||| Sbjct: 112192 tctgcgtgctcaagctcttcagcc 112169
>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0084K06 Length = 177895 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gctcctccagctcggcgccg 270 |||||||||||||||||||| Sbjct: 44821 gctcctccagctcggcgccg 44802
>emb|AL954695.14| Zebrafish DNA sequence from clone CH211-202N12 in linkage group 1, complete sequence Length = 207004 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tcgtcatcctcaaactggtc 92 |||||||||||||||||||| Sbjct: 78066 tcgtcatcctcaaactggtc 78047
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacac 173 |||||||||||||||| ||||||| Sbjct: 91390 ctgccgctcatcggcaacctacac 91413
>emb|BX640796.1|HSM806894 Homo sapiens mRNA; cDNA DKFZp686E0469 (from clone DKFZp686E0469); complete cds Length = 7447 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcaaactggtcatcggtcgc 101 |||||||||||||||||||| Sbjct: 4010 tcaaactggtcatcggtcgc 3991
>emb|Y13978.1|MMTHR4D1 Gallus gallus mRNA for thrombomucin, alternatively spliced, clone 4d1 Length = 3124 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 agctcttcagccagcgccgc 470 |||||||||||||||||||| Sbjct: 498 agctcttcagccagcgccgc 517
>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0494D11 Length = 149198 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 cacgacgccgccttcgccagccgc 347 ||||||||||||||||| |||||| Sbjct: 135193 cacgacgccgccttcgcgagccgc 135170
>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1221_H04 Length = 129387 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 cacgacgccgccttcgccagccgc 347 ||||||||||||||||| |||||| Sbjct: 50721 cacgacgccgccttcgcgagccgc 50698
>emb|AJ324924.1|HSA324924 Homo sapiens genomic sequence surrounding NotI site, clone NL1-DE21C Length = 973 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cctcaaactggtcatcggtc 99 |||||||||||||||||||| Sbjct: 122 cctcaaactggtcatcggtc 141
>dbj|AK071438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091P04, full insert sequence Length = 907 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 247 tcatgctcctccagctcggcgccgtgcccacgctcgtcgt 286 ||||||| |||| | |||||| ||||||||||||||||| Sbjct: 598 tcatgctgctccggatcggcgaggtgcccacgctcgtcgt 559
>dbj|AK069701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027B10, full insert sequence Length = 1737 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 150 ctgccgctcatcggcagcctacac 173 |||||||||||||||| ||||||| Sbjct: 224 ctgccgctcatcggcaacctacac 247
>dbj|AK067200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097P19, full insert sequence Length = 2151 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tcatgctcctccagctcggc 266 |||||||||||||||||||| Sbjct: 514 tcatgctcctccagctcggc 533
>dbj|AK065355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013014E16, full insert sequence Length = 1395 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tcatgctcctccagctcggc 266 |||||||||||||||||||| Sbjct: 514 tcatgctcctccagctcggc 533
>gb|AY107750.1| Zea mays PCO107612 mRNA sequence Length = 1158 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ctcctccagctcggcgccgt 271 |||||||||||||||||||| Sbjct: 761 ctcctccagctcggcgccgt 742
>gb|AY105086.1| Zea mays PCO107611 mRNA sequence Length = 615 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ctcctccagctcggcgccgt 271 |||||||||||||||||||| Sbjct: 233 ctcctccagctcggcgccgt 214
>gb|AF123259.1|AF123259 Lycopersicon esculentum heat shock protein 90 (HSP90) mRNA, partial cds Length = 1610 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tcttcttcgctctcgtcatc 80 |||||||||||||||||||| Sbjct: 708 tcttcttcgctctcgtcatc 689
>emb|AL731879.5|CNS08C8K Oryza sativa chromosome 12, . BAC OSJNBb0016I13 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150192 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 cagctgcggcggcaagggca 393 |||||||||||||||||||| Sbjct: 82311 cagctgcggcggcaagggca 82330
>emb|AL833280.1|HSM804593 Homo sapiens mRNA; cDNA DKFZp451I248 (from clone DKFZp451I248) Length = 7233 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tcaaactggtcatcggtcgc 101 |||||||||||||||||||| Sbjct: 4731 tcaaactggtcatcggtcgc 4712 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,508,130 Number of Sequences: 3902068 Number of extensions: 3508130 Number of successful extensions: 84223 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81646 Number of HSP's gapped (non-prelim): 2572 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
