>ref|XM_475184.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1437

 Score =  153 bits (77), Expect = 7e-34
 Identities = 164/193 (84%)
 Strand = Plus / Plus

                                                                       
Query: 302 agctgacgtcgcggtggcgggagctccacggcagcaacgactggcaggggctgctggacc 361
           ||||| || |||||||||||||| |||||||  || ||||||||  ||||||||| ||||
Sbjct: 362 agctggcggcgcggtggcgggagatccacgggcgcgacgactgggcggggctgctcgacc 421

                                                                       
Query: 362 ccatcgacacggtgctccggggagagctgatccggtacggcgagttcgcgcaggcgtgct 421
           | || ||| || |||||||    ||||| ||||| |||||||||||||||||||||||||
Sbjct: 422 cgatggacccgctgctccgctcggagctcatccgctacggcgagttcgcgcaggcgtgct 481

                                                                       
Query: 422 acgactcgttcgactacgaccgcttctcccgctactccggcagctgcaagtacccgacgc 481
           ||||| | |||||||||||||  | ||||||||||| |||||||||||||||||||   |
Sbjct: 482 acgacgccttcgactacgacccgtcctcccgctactgcggcagctgcaagtacccgcgcc 541

                        
Query: 482 gcaccttcttcga 494
           || ||||||||||
Sbjct: 542 gcgccttcttcga 554

>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01,
             complete sequence
          Length = 88352

 Score =  153 bits (77), Expect = 7e-34
 Identities = 164/193 (84%)
 Strand = Plus / Minus

                                                                         
Query: 302   agctgacgtcgcggtggcgggagctccacggcagcaacgactggcaggggctgctggacc 361
             ||||| || |||||||||||||| |||||||  || ||||||||  ||||||||| ||||
Sbjct: 48634 agctggcggcgcggtggcgggagatccacgggcgcgacgactgggcggggctgctcgacc 48575

                                                                         
Query: 362   ccatcgacacggtgctccggggagagctgatccggtacggcgagttcgcgcaggcgtgct 421
             | || ||| || |||||||    ||||| ||||| |||||||||||||||||||||||||
Sbjct: 48574 cgatggacccgctgctccgctcggagctcatccgctacggcgagttcgcgcaggcgtgct 48515

                                                                         
Query: 422   acgactcgttcgactacgaccgcttctcccgctactccggcagctgcaagtacccgacgc 481
             ||||| | |||||||||||||  | ||||||||||| |||||||||||||||||||   |
Sbjct: 48514 acgacgccttcgactacgacccgtcctcccgctactgcggcagctgcaagtacccgcgcc 48455

                          
Query: 482   gcaccttcttcga 494
             || ||||||||||
Sbjct: 48454 gcgccttcttcga 48442

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  153 bits (77), Expect = 7e-34
 Identities = 164/193 (84%)
 Strand = Plus / Minus

                                                                            
Query: 302      agctgacgtcgcggtggcgggagctccacggcagcaacgactggcaggggctgctggacc 361
                ||||| || |||||||||||||| |||||||  || ||||||||  ||||||||| ||||
Sbjct: 18743231 agctggcggcgcggtggcgggagatccacgggcgcgacgactgggcggggctgctcgacc 18743172

                                                                            
Query: 362      ccatcgacacggtgctccggggagagctgatccggtacggcgagttcgcgcaggcgtgct 421
                | || ||| || |||||||    ||||| ||||| |||||||||||||||||||||||||
Sbjct: 18743171 cgatggacccgctgctccgctcggagctcatccgctacggcgagttcgcgcaggcgtgct 18743112

                                                                            
Query: 422      acgactcgttcgactacgaccgcttctcccgctactccggcagctgcaagtacccgacgc 481
                ||||| | |||||||||||||  | ||||||||||| |||||||||||||||||||   |
Sbjct: 18743111 acgacgccttcgactacgacccgtcctcccgctactgcggcagctgcaagtacccgcgcc 18743052

                             
Query: 482      gcaccttcttcga 494
                || ||||||||||
Sbjct: 18743051 gcgccttcttcga 18743039

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 267     caccctcgccgagaagaccggc 288
               ||||||||||||||||||||||
Sbjct: 5943476 caccctcgccgagaagaccggc 5943497

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 332     gcagcaacgactggcaggggctgctg 357
               ||||||||| ||||||||||||||||
Sbjct: 5610452 gcagcaacgcctggcaggggctgctg 5610427

>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence
          Length = 211926

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     cacaattcagagcgcacacac 36
              |||||||||||||||||||||
Sbjct: 210269 cacaattcagagcgcacacac 210289

>gb|BT009410.1| Triticum aestivum clone wlm96.pk061.i14:fis, full insert mRNA
           sequence
          Length = 1317

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 355 ctggaccccatcgacacggtgctcc 379
           ||||||| |||||||||||||||||
Sbjct: 919 ctggaccgcatcgacacggtgctcc 943

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   cttgcgtccggcggcgctgct 149
             |||||||||||||||||||||
Sbjct: 87304 cttgcgtccggcggcgctgct 87324

>emb|CT572999.10| Mouse DNA sequence from clone RP23-6C18 on chromosome 12, complete
              sequence
          Length = 176044

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     cacaattcagagcgcacacac 36
              |||||||||||||||||||||
Sbjct: 174260 cacaattcagagcgcacacac 174240

>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 242    ccgtcgtcggagacatggagcgcg 265
              ||||||||||||||||||| ||||
Sbjct: 591527 ccgtcgtcggagacatggatcgcg 591504

>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 103     tccctcccggacagccctgccggg 126
               ||||||||| ||||||||||||||
Sbjct: 3808126 tccctcccgaacagccctgccggg 3808149

>ref|XM_540243.2| PREDICTED: Canis familiaris similar to Synaptotagmin-6
           (Synaptotagmin VI) (SytVI) (LOC483127), mRNA
          Length = 1601

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 430 ttcgactacgaccgcttctcccgc 453
           ||||||| ||||||||||||||||
Sbjct: 949 ttcgacttcgaccgcttctcccgc 972

>emb|CR936849.22| Mouse DNA sequence from clone DN-250A21 on chromosome 3, complete
              sequence
          Length = 153083

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      catacaaatcacaattcaga 26
              ||||||||||||||||||||
Sbjct: 120504 catacaaatcacaattcaga 120523

>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    ccgacggccagctgacgtcg 312
              ||||||||||||||||||||
Sbjct: 181180 ccgacggccagctgacgtcg 181199

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 242     ccgtcgtcggagacatggagcgcggcac 269
               |||||||||| || ||||||||||||||
Sbjct: 3598762 ccgtcgtcggcgagatggagcgcggcac 3598789

>gb|AC096552.3| Homo sapiens BAC clone RP11-41M22 from 2, complete sequence
          Length = 119452

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    caatcacagtaacaagaatg 78
             ||||||||||||||||||||
Sbjct: 48697 caatcacagtaacaagaatg 48678

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 137     cggcggcgctgctctcgaagatgg 160
               ||||||||||||| ||||||||||
Sbjct: 1697075 cggcggcgctgctgtcgaagatgg 1697052

>gb|L22658.1|MUSPOLPA Mus musculus pseudo poly)(A) polymerase gene fragment
          Length = 3802

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 220 ccggccaacatgacgccgggctcc 243
           |||||||||||| |||||||||||
Sbjct: 129 ccggccaacatggcgccgggctcc 106

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 339     cgactggcaggggctgctgg 358
               ||||||||||||||||||||
Sbjct: 2007953 cgactggcaggggctgctgg 2007934

>emb|AL671857.16| Mouse DNA sequence from clone RP23-176A21 on chromosome 3, complete
             sequence
          Length = 207354

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     catacaaatcacaattcaga 26
             ||||||||||||||||||||
Sbjct: 63178 catacaaatcacaattcaga 63197


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,512,040
Number of Sequences: 3902068
Number of extensions: 2512040
Number of successful extensions: 52089
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51388
Number of HSP's gapped (non-prelim): 698
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)