ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet115b05 |
|---|---|
| Clone Library Name | barley_pub |
>UGPI5_ARATH (Q9C7F7) Uncharacterized GPI-anchored protein At1g27950 precursor| Length = 193 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%) Frame = +3 Query: 255 CLTYVQLTATAPAPTPDCCSGFRQVLGTSKRCMCILVKDRDEPALGIK---VNITRSMNL 425 CL + T A P+ CC + +C+C +++ +K V + + L Sbjct: 45 CLDFA--TGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQL 102 Query: 426 PSVCNL-AATFSDCPKILNMSPDS 494 P+ C L A+ ++CPK+L +SP S Sbjct: 103 PTSCQLHNASITNCPKLLGISPSS 126
>NLTP1_HORVU (P07597) Nonspecific lipid-transfer protein 1 precursor (LTP 1)| (Probable amylase/protease inhibitor) Length = 117 Score = 37.0 bits (84), Expect = 0.029 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Frame = +3 Query: 255 CLTYVQLTATAPAPTPDCCSGFRQVLGTS-----KRCMCILVKDRDEPALGI-KVNITRS 416 CLTYVQ P P+ +CC+G R + + ++ +C +K A GI +N+ + Sbjct: 39 CLTYVQ---GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKG---IARGIHNLNLNNA 92 Query: 417 MNLPSVCNLAATFSDCPKI 473 ++PS CN+ ++ P I Sbjct: 93 ASIPSKCNVNVPYTISPDI 111
>NLTP_AMACA (P80450) Nonspecific lipid-transfer protein (LTP) (Phospholipid| transfer protein) (PLTP) Length = 94 Score = 33.5 bits (75), Expect = 0.32 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 7/83 (8%) Frame = +3 Query: 246 LATCLTYVQLTATAPAPTPDCCSGFRQVLGTSK-------RCMCILVKDRDEPALGIKVN 404 L C+TY++ T P P +CC+G R + ++ C C+ + +L KV Sbjct: 11 LGPCMTYLKGTGATPPPA-NCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKV- 68 Query: 405 ITRSMNLPSVCNLAATFSDCPKI 473 + L S C + ++S P + Sbjct: 69 ---AARLASQCGVRMSYSVSPNV 88
>NLTP1_AMAHP (P83167) Nonspecific lipid-transfer protein 1 (LTP 1) (NS-LTP1)| Length = 94 Score = 33.5 bits (75), Expect = 0.32 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 7/83 (8%) Frame = +3 Query: 246 LATCLTYVQLTATAPAPTPDCCSGFRQVLGTSK-------RCMCILVKDRDEPALGIKVN 404 L C+TY++ T P P +CC+G R + ++ C C+ + +L KV Sbjct: 11 LGPCMTYLKGTGATPPPA-NCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKV- 68 Query: 405 ITRSMNLPSVCNLAATFSDCPKI 473 + L S C + ++S P + Sbjct: 69 ---AARLASQCGVRMSYSVSPNV 88
>NLTP_BETVU (Q43748) Nonspecific lipid-transfer protein precursor (LTP)| Length = 117 Score = 32.7 bits (73), Expect = 0.54 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Frame = +3 Query: 246 LATCLTYVQLTATAPAPTPDCCSGFRQVLGTS-----KRCMCILVKDRDEPALGIKVNIT 410 LA C+ Y+Q AP P+ CC G + + + ++ C +K GI N Sbjct: 36 LAPCIGYLQ---GAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGI--NYG 90 Query: 411 RSMNLPSVCNLAATFSDCP 467 ++ +LP C ++ ++ P Sbjct: 91 KAASLPRQCGVSVPYAISP 109
>MC1_PINRA (O24493) Male-cone protein 1 precursor (PRMC1)| Length = 92 Score = 32.7 bits (73), Expect = 0.54 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +3 Query: 246 LATCLTYVQLTATAPAPTPDCCSGFRQVLGTSKRCMCILVKDRDEPALGIKVNITRSMNL 425 LA C + V L++ P+ +CC + GTS C+C ++ ++L Sbjct: 35 LAPCTSAVGLSSNGVKPSSECCDALK---GTSTSCVC--------------KSVRAVISL 77 Query: 426 PSVCNLAA 449 P+ CNL A Sbjct: 78 PAKCNLPA 85
>NLTP1_SORBI (Q43193) Nonspecific lipid-transfer protein 1 precursor (LTP 1)| Length = 118 Score = 32.7 bits (73), Expect = 0.54 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 10/86 (11%) Frame = +3 Query: 246 LATCLTYVQLTATAPAPTPDCCSGFRQVLGTS-----KRCMCILVKDRDEPALGIKVNIT 410 +A CL+Y + AP+ CCSG R + + +R C +K+ G+ N Sbjct: 36 IALCLSYAR--GQGFAPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGISGL--NAG 91 Query: 411 RSMNLPSVCNLA-----ATFSDCPKI 473 + ++PS C ++ +T +DC ++ Sbjct: 92 NAASIPSKCGVSVPYTISTSTDCSRV 117
>NLTP1_PHAAU (P83434) Nonspecific lipid-transfer protein 1 (LTP 1) (NS-LTP1)| Length = 91 Score = 32.0 bits (71), Expect = 0.92 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Frame = +3 Query: 246 LATCLTYVQLTATAPAPTPDCCSGFRQVLGTS-----KRCMCILVKDRDEPALGIKVNIT 410 LA C+ ++Q P P CC+G + +L +S +R +C +K GI N Sbjct: 10 LAQCIGFLQKGGVVP---PSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNA 66 Query: 411 RSMNLPSVCNL 443 + LP C + Sbjct: 67 EA--LPGKCGV 75
>NLTP_PRUAV (Q9M5X8) Nonspecific lipid-transfer protein precursor (LTP)| (Allergen Pru av 3) Length = 117 Score = 30.8 bits (68), Expect = 2.1 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 7/81 (8%) Frame = +3 Query: 246 LATCLTYVQLTATAPAPTPDCCSGFRQVLGTSK-------RCMCILVKDRDEPALGIKVN 404 LA C+ YV+ P P CC+G R + +K C C+ P VN Sbjct: 36 LAPCIAYVRGGGAVP---PACCNGIRNINNLAKTTADRQTACNCLKQLSASVPG----VN 88 Query: 405 ITRSMNLPSVCNLAATFSDCP 467 + LP C + + P Sbjct: 89 ANNAAALPGKCGVNVPYKISP 109
>ZM33_MAIZE (O82106) Anther-specific protein MZm3-3 precursor| Length = 109 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = +3 Query: 234 KLMGLATCLTYVQLTATA---PAPTPDCCSGFRQVLGTSKRCMC 356 +L GLA CL Y PAP P+CCS V S+ C C Sbjct: 48 QLRGLAPCLRYSVPPLPGQVPPAPGPECCSALGAV---SRDCAC 88
>THIED_COREF (Q8FTH8) Multifunctional protein thiED [Includes:| Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase); Phosphomethylpyrimidine kinase (EC 2.7.4.7) (HMP-phosphate kinase) (HMP-P k Length = 739 Score = 30.4 bits (67), Expect = 2.7 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -2 Query: 464 AVGEGSGEVADGGEVHGAGDVDLDPERRLVAVLDEDAH 351 A G+ GE+ D G + G GD L E L +D+DAH Sbjct: 534 ATGDVLGEILDSGFIRGLGDGTLSREEFLF-YIDQDAH 570
>A9_BRANA (Q05772) Tapetum-specific protein A9 precursor| Length = 96 Score = 30.4 bits (67), Expect = 2.7 Identities = 20/66 (30%), Positives = 27/66 (40%) Frame = +3 Query: 237 LMGLATCLTYVQLTATAPAPTPDCCSGFRQVLGTSKRCMCILVKDRDEPALGIKVNITRS 416 L + C V A PAP +CC + T+K C+C AL T + Sbjct: 36 LSNMQVCAPLVLPGAVNPAPNSNCCIALQ---ATNKDCIC--------NALRAATTFTTT 84 Query: 417 MNLPSV 434 NLPS+ Sbjct: 85 CNLPSL 90
>NLTP_PYRCO (Q9M5X6) Nonspecific lipid-transfer protein precursor (LTP)| (Allergen Pyr c 3) Length = 115 Score = 29.6 bits (65), Expect = 4.6 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Frame = +3 Query: 246 LATCLTYVQLTATAPAPTPDCCSGFRQVLGTSK-----RCMCILVKDRDEPALGIKVNIT 410 LA C+ YV+ P P CC+G + + G +K + C +K+ G VN Sbjct: 34 LAPCINYVRSGGAVP---PACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSG--VNPG 88 Query: 411 RSMNLPSVCNL 443 + +LP C + Sbjct: 89 NAESLPGKCGV 99
>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)| (DRF2) (mDia3) Length = 1098 Score = 29.3 bits (64), Expect = 6.0 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 Query: 479 VEDLGAVGEGSGEVADGGEVHGAG 408 +E+LGA G+G GGE HG G Sbjct: 1 MEELGAAASGAGGGGGGGEEHGGG 24
>NLTP_MALDO (Q9M5X7) Nonspecific lipid-transfer protein precursor (LTP)| (Allergen Mal d 3) Length = 115 Score = 28.9 bits (63), Expect = 7.8 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 5/71 (7%) Frame = +3 Query: 246 LATCLTYVQLTATAPAPTPDCCSGFRQVLG-----TSKRCMCILVKDRDEPALGIKVNIT 410 LA C+ YV+ P P CC+G R + G ++ C +K+ G VN Sbjct: 34 LAPCIGYVRSGGAVP---PACCNGIRTINGLARTTADRQTACNCLKNLAGSISG--VNPN 88 Query: 411 RSMNLPSVCNL 443 + LP C + Sbjct: 89 NAAGLPGKCGV 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.126 0.460 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,967,838 Number of Sequences: 219361 Number of extensions: 702843 Number of successful extensions: 3141 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2993 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3132 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits)
