ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet114f11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_534967.2| PREDICTED: Canis familiaris hypothetical LOC477773 (LOC477773), mRNA Length = 1665 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 389 gaggagaagacaaaggaaggcga 411 ||||||||||||||||||||||| Sbjct: 540 gaggagaagacaaaggaaggcga 562
>gb|DQ214126.1| Taeniopygia guttata clone 0061P0028E08 beta-synuclein-like mRNA, complete sequence Length = 1274 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 379 ggccgaggccgaggagaagacaaaggaagg 408 ||||||||||| ||||||||| |||||||| Sbjct: 237 ggccgaggccgcggagaagaccaaggaagg 266
>gb|DQ214125.1| Taeniopygia guttata clone 0061P0027D09 beta-synuclein-like mRNA, complete sequence Length = 1281 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 379 ggccgaggccgaggagaagacaaaggaagg 408 ||||||||||| ||||||||| |||||||| Sbjct: 245 ggccgaggccgcggagaagaccaaggaagg 274
>ref|XM_367568.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07479.4) partial mRNA Length = 2238 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 aggccgaggccgaggagaaga 398 ||||||||||||||||||||| Sbjct: 1658 aggccgaggccgaggagaaga 1678
>gb|AC160540.7| Mus musculus chromosome 7, clone RP23-44O19, complete sequence Length = 221807 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 113 cttgcttctgtctccttagctttcc 137 ||||||||||| ||||||||||||| Sbjct: 141167 cttgcttctgtgtccttagctttcc 141143
>ref|XM_680258.1| PREDICTED: Danio rerio similar to Hiat1-prov protein (LOC557243), mRNA Length = 1962 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 361 tgaatccaaagagaaagaggccgag 385 ||||||||||||||||| ||||||| Sbjct: 1657 tgaatccaaagagaaaggggccgag 1633
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ttccaactggtcaaggaagtgaaga 189 ||||||||||||||||| ||||||| Sbjct: 2867479 ttccaactggtcaaggatgtgaaga 2867455
>emb|AL626765.22| Mouse DNA sequence from clone RP23-179N14 on chromosome 19, complete sequence Length = 206196 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 agaagaacaaggagagaagga 207 ||||||||||||||||||||| Sbjct: 57776 agaagaacaaggagagaagga 57796
>ref|NM_118831.2| Arabidopsis thaliana RNA binding / aconitate hydratase/ hydro-lyase/ iron ion binding / lyase AT4G26970 mRNA, complete cds Length = 3815 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccagaagtgatggaaaaagt 333 |||||||||||||||||||| Sbjct: 2192 ccagaagtgatggaaaaagt 2211
>gb|AC168852.2| Mus musculus BAC clone RP24-191L21 from chromosome 6, complete sequence Length = 171677 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 ttccaactggtcaaggaagtgaag 188 ||||| |||||||||||||||||| Sbjct: 84195 ttccagctggtcaaggaagtgaag 84218
>gb|AC123728.8| Mus musculus chromosome 3, clone RP23-453L19, complete sequence Length = 161887 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gatggaaaaagttgctgagg 341 |||||||||||||||||||| Sbjct: 67675 gatggaaaaagttgctgagg 67694
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 aatccaaagagaaagaggcc 382 |||||||||||||||||||| Sbjct: 1059845 aatccaaagagaaagaggcc 1059864
>ref|XM_360430.1| Magnaporthe grisea 70-15 hypothetical protein (MG10742.4) partial mRNA Length = 1224 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 aggccgaggccgaggagaag 397 |||||||||||||||||||| Sbjct: 883 aggccgaggccgaggagaag 864
>ref|XM_322577.1| Neurospora crassa OR74A predicted protein (NCU00492.1) partial mRNA Length = 2985 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 aagaggccgaggccgaggag 394 |||||||||||||||||||| Sbjct: 1832 aagaggccgaggccgaggag 1851
>ref|XM_951084.1| Neurospora crassa OR74A hypothetical protein (NCU00492.1) partial mRNA Length = 2985 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 aagaggccgaggccgaggag 394 |||||||||||||||||||| Sbjct: 1832 aagaggccgaggccgaggag 1851
>gb|AC147017.4| Pan troglodytes BAC clone RP43-77F5 from 7, complete sequence Length = 178288 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gaggagaagacaaaggaagg 408 |||||||||||||||||||| Sbjct: 7954 gaggagaagacaaaggaagg 7935
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 aatccaaagagaaagaggcc 382 |||||||||||||||||||| Sbjct: 1103491 aatccaaagagaaagaggcc 1103510
>ref|XM_454672.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E16104g predicted mRNA Length = 3261 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tcttggtccagatcaaggag 27 |||||||||||||||||||| Sbjct: 3104 tcttggtccagatcaaggag 3123
>gb|AC073336.6| Homo sapiens BAC clone RP11-476H24 from 7, complete sequence Length = 166261 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gaggagaagacaaaggaagg 408 |||||||||||||||||||| Sbjct: 8171 gaggagaagacaaaggaagg 8152
>gb|AC120558.12| Mus musculus chromosome 18, clone RP24-494K12, complete sequence Length = 216435 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aaaagcaaccctgatgtgat 273 |||||||||||||||||||| Sbjct: 124000 aaaagcaaccctgatgtgat 124019
>ref|XM_749349.1| Aspergillus fumigatus Af293 galactose-proton symport (Afu3g11790) partial mRNA Length = 1731 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gccgaggccgaggagaagac 399 |||||||||||||||||||| Sbjct: 513 gccgaggccgaggagaagac 494
>gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome 18, complete sequence Length = 154520 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aaaagcaaccctgatgtgat 273 |||||||||||||||||||| Sbjct: 30979 aaaagcaaccctgatgtgat 30998
>emb|X97905.1|VFSSDBP V.faba mRNA for an RNA- or ssDNA-binding protein Length = 1131 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 tgaagaagaacaaggagagaagga 207 |||||||| ||||||||||||||| Sbjct: 288 tgaagaaggacaaggagagaagga 311
>gb|AC024475.15| Homo sapiens chromosome 11, clone RP11-702F3, complete sequence Length = 191960 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 actggtcaaggaagtgaaga 189 |||||||||||||||||||| Sbjct: 138446 actggtcaaggaagtgaaga 138465
>ref|XM_648527.1| Entamoeba histolytica HM-1:IMSS U2 snRNP auxiliary factor large subunit (77.t00020) partial mRNA Length = 2139 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gaagaagaacaaggagagaa 204 |||||||||||||||||||| Sbjct: 197 gaagaagaacaaggagagaa 216
>gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosome 9, complete sequence Length = 191274 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agaagaacaaggagagaagg 206 |||||||||||||||||||| Sbjct: 26888 agaagaacaaggagagaagg 26907
>emb|AL135926.12| Human DNA sequence from clone RP11-375F2 on chromosome 1 Contains a ubiquitin-like 1 (sentrin) (UBL1) pseudogene, the 3' end of a novel gene and a ribosomal protein L29 (RPL29) pseudogene, complete sequence Length = 158519 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gaggagaagacaaaggaagg 408 |||||||||||||||||||| Sbjct: 12682 gaggagaagacaaaggaagg 12663
>gb|BT000492.1| Arabidopsis thaliana putative aconitase (At4g26970/F10M23_310) mRNA, complete cds Length = 2988 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccagaagtgatggaaaaagt 333 |||||||||||||||||||| Sbjct: 2033 ccagaagtgatggaaaaagt 2052
>ref|XM_775786.1| PREDICTED: Strongylocentrotus purpuratus similar to exportin 1, CRM1 homolog (LOC575382), mRNA Length = 2469 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tcttggtccagatcaaggag 27 |||||||||||||||||||| Sbjct: 2306 tcttggtccagatcaaggag 2325
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 tcttggtccagatcaaggag 27 |||||||||||||||||||| Sbjct: 1428888 tcttggtccagatcaaggag 1428869
>gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosome 9, complete sequence Length = 226160 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agaagaacaaggagagaagg 206 |||||||||||||||||||| Sbjct: 188861 agaagaacaaggagagaagg 188880
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccagaagtgatggaaaaagt 333 |||||||||||||||||||| Sbjct: 51007 ccagaagtgatggaaaaagt 51026
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aagtgaagaagaacaaggagagaa 204 ||||||||||||| |||||||||| Sbjct: 26200 aagtgaagaagaagaaggagagaa 26223
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccagaagtgatggaaaaagt 333 |||||||||||||||||||| Sbjct: 95164 ccagaagtgatggaaaaagt 95183
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aagtgaagaagaacaaggagagaa 204 ||||||||||||| |||||||||| Sbjct: 35121 aagtgaagaagaagaaggagagaa 35144
>gb|AC129913.2| Homo sapiens chromosome 11, clone CTD-2382G9, complete sequence Length = 111282 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 actggtcaaggaagtgaaga 189 |||||||||||||||||||| Sbjct: 104962 actggtcaaggaagtgaaga 104943
>emb|BX321875.7| Zebrafish DNA sequence from clone CH211-254C8 in linkage group 16, complete sequence Length = 169994 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 aggaagtgaagaagaacaaggaga 201 ||||||||||||| |||||||||| Sbjct: 9308 aggaagtgaagaaaaacaaggaga 9331
>gb|AC092794.10| Homo sapiens 12 BAC RP11-295I5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125756 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 tgcttttcggcttgcttctgtctc 126 |||||||| ||||||||||||||| Sbjct: 29100 tgcttttctgcttgcttctgtctc 29123
>gb|AE010056.1| Streptococcus pyogenes strain MGAS8232, section 104 of 173 of the complete genome Length = 11449 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 aatccaaagagaaagaggcc 382 |||||||||||||||||||| Sbjct: 2715 aatccaaagagaaagaggcc 2734
>gb|AC164093.2| Mus musculus BAC clone RP23-131O16 from chromosome 16, complete sequence Length = 229443 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcttgcttctgtctccttag 131 |||||||||||||||||||| Sbjct: 93769 gcttgcttctgtctccttag 93788
>dbj|AK221930.1| Arabidopsis thaliana mRNA for BCS1 like mitochondrial protein, complete cds, clone: RAFL22-40-J15 Length = 1741 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aagtgaagaagaacaaggagagaa 204 ||||||||||||| |||||||||| Sbjct: 1611 aagtgaagaagaagaaggagagaa 1634
>gb|AY050431.1| Arabidopsis thaliana AT4g26970/F10M23_310 mRNA, complete cds Length = 3291 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccagaagtgatggaaaaagt 333 |||||||||||||||||||| Sbjct: 2188 ccagaagtgatggaaaaagt 2207
>gb|AC157651.3| Mus musculus BAC clone RP24-363O21 from chromosome 6, complete sequence Length = 171141 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gacaaggcgaaagacaaggtgaaaagca 260 ||||||| ||| |||||||||||||||| Sbjct: 83569 gacaaggtgaaggacaaggtgaaaagca 83542
>gb|AC151052.4| Mus musculus BAC clone RP24-72K12 from chromosome 7, complete sequence Length = 216989 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 ctgtctccttagctttccccattt 143 ||||||| |||||||||||||||| Sbjct: 40551 ctgtctctttagctttccccattt 40528
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ttctgtctccttagctttcc 137 |||||||||||||||||||| Sbjct: 19930903 ttctgtctccttagctttcc 19930922
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 acccagaagtgatggaaaaa 331 |||||||||||||||||||| Sbjct: 2320911 acccagaagtgatggaaaaa 2320930
>emb|BX826822.1|CNS0A3BB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1746 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccagaagtgatggaaaaagt 333 |||||||||||||||||||| Sbjct: 676 ccagaagtgatggaaaaagt 695
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gtccagatcaaggagctccg 32 |||||||||||||||||||| Sbjct: 1219456 gtccagatcaaggagctccg 1219437
>gb|AC024559.15| Homo sapiens 3 BAC RP11-407B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165016 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tgaagaagaacaaggagaga 203 |||||||||||||||||||| Sbjct: 72584 tgaagaagaacaaggagaga 72603
>dbj|AB012099.1| Thermococcus kodakaraensis KOD1 Pk-glpK gene for glycerol kinase, complete cds Length = 1635 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gtccagatcaaggagctccg 32 |||||||||||||||||||| Sbjct: 1255 gtccagatcaaggagctccg 1274
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome Length = 1900521 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 aatccaaagagaaagaggcc 382 |||||||||||||||||||| Sbjct: 1058311 aatccaaagagaaagaggcc 1058330
>gb|AC012386.39| Homo sapiens 12 BAC RP11-642P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 44118 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 agtgatggaaaaagttgctg 338 |||||||||||||||||||| Sbjct: 16373 agtgatggaaaaagttgctg 16392
>gb|AC151747.3| Ornithorhynchus anatinus chromosome UNK clone OABb-520P24, complete sequence Length = 142317 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aggagagaaggacatggatg 215 |||||||||||||||||||| Sbjct: 36133 aggagagaaggacatggatg 36114
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 aagaggccgaggccgaggag 394 |||||||||||||||||||| Sbjct: 1335389 aagaggccgaggccgaggag 1335408
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome Length = 1894275 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 aatccaaagagaaagaggcc 382 |||||||||||||||||||| Sbjct: 838572 aatccaaagagaaagaggcc 838553
>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1018E06 Length = 178499 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ttctgtctccttagctttcc 137 |||||||||||||||||||| Sbjct: 69243 ttctgtctccttagctttcc 69262
>dbj|AP005776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0018G11 Length = 121084 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 acccagaagtgatggaaaaa 331 |||||||||||||||||||| Sbjct: 56988 acccagaagtgatggaaaaa 57007
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 acccagaagtgatggaaaaa 331 |||||||||||||||||||| Sbjct: 107860 acccagaagtgatggaaaaa 107879
>gb|U19724.1|MMU19724 Mus musculus MMTV integration locus, aromatase gene, 3'UTR Length = 5523 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 agaagaacaaggagagaagg 206 |||||||||||||||||||| Sbjct: 3864 agaagaacaaggagagaagg 3883
>dbj|AK067944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123M24, full insert sequence Length = 4241 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 acccagaagtgatggaaaaa 331 |||||||||||||||||||| Sbjct: 2428 acccagaagtgatggaaaaa 2409
>dbj|AP002456.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-956A8, complete sequence Length = 114109 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccagaagtgatggaaaaagt 333 |||||||||||||||||||| Sbjct: 30710 ccagaagtgatggaaaaagt 30729
>dbj|AP000796.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-14D14, complete sequence Length = 102173 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccagaagtgatggaaaaagt 333 |||||||||||||||||||| Sbjct: 33928 ccagaagtgatggaaaaagt 33947
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 aagaggccgaggccgaggag 394 |||||||||||||||||||| Sbjct: 1011832 aagaggccgaggccgaggag 1011851
>gb|AC122881.4| Mus musculus BAC clone RP23-79J21 from 13, complete sequence Length = 221931 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 gaggagaagacaaaggaagg 408 |||||||||||||||||||| Sbjct: 53986 gaggagaagacaaaggaagg 54005
>gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, complete sequence Length = 187115 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 gacaaggcgaaagacaaggtgaaaagca 260 ||||||| ||| |||||||||||||||| Sbjct: 209 gacaaggtgaaggacaaggtgaaaagca 182
>emb|AL837506.3| Mouse DNA sequence from clone RP23-353G2 on chromosome 2, complete sequence Length = 112171 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 tgaatccaaagagaaagaggccga 384 |||||||||||||||||| ||||| Sbjct: 51722 tgaatccaaagagaaagaagccga 51745 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,928,672 Number of Sequences: 3902068 Number of extensions: 4928672 Number of successful extensions: 108375 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107892 Number of HSP's gapped (non-prelim): 483 length of query: 465 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 443 effective length of database: 17,147,199,772 effective search space: 7596209498996 effective search space used: 7596209498996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
