ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet114f09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473255.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2079 Score = 515 bits (260), Expect = e-143 Identities = 422/476 (88%) Strand = Plus / Plus Query: 1 tatctccttgtcaccgtctgcatcggcacaatctacctggatgttggcaccaaatacaca 60 |||||||| || ||||||||||| ||||| |||||| || || |||||||| |||||| Sbjct: 1219 tatctcctcgtgaccgtctgcattggcaccatctactatgacgtcggcaccaagtacaca 1278 Query: 61 tccatcctggccagggcagcatgtgcagcattcgtctttggattcgtcaccttcatgtcc 120 ||||||||||| ||||| || ||| | ||||||||||| ||||||||||| |||||||| Sbjct: 1279 tccatcctggctagggctgcctgtaccgcattcgtcttcggattcgtcactttcatgtca 1338 Query: 121 attggaggattcccttcattcgtggaagaaatgaaggtcttccagcgggagcggctgaat 180 |||||||| ||||||||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 1339 attggagggttcccttcatttgttgaagaaatgaaggttttccaaagggagcggctgaat 1398 Query: 181 gggcactacggtgttgcagcatttgtcattgccaacaccatctcggctctgccattcctg 240 ||||| |||||||| || || |||||||| |||||| |||||||| ||||||||| || Sbjct: 1399 gggcattacggtgtcgcggcttttgtcatcagcaacacaatctcggcgctgccattcttg 1458 Query: 241 gtcctgatatgcttcctgtcagggacagtatgctacttcatggtgcgccttcatcctggt 300 ||||||||||||||| |||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 1459 gtcctgatatgcttcttgtcagggaccatatgctacttcatggtgcgccttcacccaggt 1518 Query: 301 ttctcacactacatcttcttcgtcttgaacctctacgccagtgtcaccgtggttgagagc 360 ||||| ||||||||||||||||| | |||||||||||||| ||||| |||||||||||| Sbjct: 1519 ttctcccactacatcttcttcgttctcaacctctacgccagcgtcactgtggttgagagc 1578 Query: 361 ttgatgatggccattgcaagtgtcatacccaatttcctcatgggcatcatcataggagct 420 |||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||||| Sbjct: 1579 ttgatgatggccattgcaagtgtcatccctaatttcctcatggggatcattataggagct 1638 Query: 421 ggaattcagggaatattcatgcttgtctctggatacttcagacttccgtatgacat 476 || |||||||||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 1639 gggattcagggaatatttatgcttgtctctggatactttagacttccttacgacat 1694
>dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P15, full insert sequence Length = 2455 Score = 515 bits (260), Expect = e-143 Identities = 422/476 (88%) Strand = Plus / Plus Query: 1 tatctccttgtcaccgtctgcatcggcacaatctacctggatgttggcaccaaatacaca 60 |||||||| || ||||||||||| ||||| |||||| || || |||||||| |||||| Sbjct: 1403 tatctcctcgtgaccgtctgcattggcaccatctactatgacgtcggcaccaagtacaca 1462 Query: 61 tccatcctggccagggcagcatgtgcagcattcgtctttggattcgtcaccttcatgtcc 120 ||||||||||| ||||| || ||| | ||||||||||| ||||||||||| |||||||| Sbjct: 1463 tccatcctggctagggctgcctgtaccgcattcgtcttcggattcgtcactttcatgtca 1522 Query: 121 attggaggattcccttcattcgtggaagaaatgaaggtcttccagcgggagcggctgaat 180 |||||||| ||||||||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 1523 attggagggttcccttcatttgttgaagaaatgaaggttttccaaagggagcggctgaat 1582 Query: 181 gggcactacggtgttgcagcatttgtcattgccaacaccatctcggctctgccattcctg 240 ||||| |||||||| || || |||||||| |||||| |||||||| ||||||||| || Sbjct: 1583 gggcattacggtgtcgcggcttttgtcatcagcaacacaatctcggcgctgccattcttg 1642 Query: 241 gtcctgatatgcttcctgtcagggacagtatgctacttcatggtgcgccttcatcctggt 300 ||||||||||||||| |||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 1643 gtcctgatatgcttcttgtcagggaccatatgctacttcatggtgcgccttcacccaggt 1702 Query: 301 ttctcacactacatcttcttcgtcttgaacctctacgccagtgtcaccgtggttgagagc 360 ||||| ||||||||||||||||| | |||||||||||||| ||||| |||||||||||| Sbjct: 1703 ttctcccactacatcttcttcgttctcaacctctacgccagcgtcactgtggttgagagc 1762 Query: 361 ttgatgatggccattgcaagtgtcatacccaatttcctcatgggcatcatcataggagct 420 |||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||||| Sbjct: 1763 ttgatgatggccattgcaagtgtcatccctaatttcctcatggggatcattataggagct 1822 Query: 421 ggaattcagggaatattcatgcttgtctctggatacttcagacttccgtatgacat 476 || |||||||||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 1823 gggattcagggaatatttatgcttgtctctggatactttagacttccttacgacat 1878
>dbj|AK058387.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-A01, full insert sequence Length = 1535 Score = 515 bits (260), Expect = e-143 Identities = 422/476 (88%) Strand = Plus / Plus Query: 1 tatctccttgtcaccgtctgcatcggcacaatctacctggatgttggcaccaaatacaca 60 |||||||| || ||||||||||| ||||| |||||| || || |||||||| |||||| Sbjct: 481 tatctcctcgtgaccgtctgcattggcaccatctactatgacgtcggcaccaagtacaca 540 Query: 61 tccatcctggccagggcagcatgtgcagcattcgtctttggattcgtcaccttcatgtcc 120 ||||||||||| ||||| || ||| | ||||||||||| ||||||||||| |||||||| Sbjct: 541 tccatcctggctagggctgcctgtaccgcattcgtcttcggattcgtcactttcatgtca 600 Query: 121 attggaggattcccttcattcgtggaagaaatgaaggtcttccagcgggagcggctgaat 180 |||||||| ||||||||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 601 attggagggttcccttcatttgttgaagaaatgaaggttttccaaagggagcggctgaat 660 Query: 181 gggcactacggtgttgcagcatttgtcattgccaacaccatctcggctctgccattcctg 240 ||||| |||||||| || || |||||||| |||||| |||||||| ||||||||| || Sbjct: 661 gggcattacggtgtcgcggcttttgtcatcagcaacacaatctcggcgctgccattcttg 720 Query: 241 gtcctgatatgcttcctgtcagggacagtatgctacttcatggtgcgccttcatcctggt 300 ||||||||||||||| |||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 721 gtcctgatatgcttcttgtcagggaccatatgctacttcatggtgcgccttcacccaggt 780 Query: 301 ttctcacactacatcttcttcgtcttgaacctctacgccagtgtcaccgtggttgagagc 360 ||||| ||||||||||||||||| | |||||||||||||| ||||| |||||||||||| Sbjct: 781 ttctcccactacatcttcttcgttctcaacctctacgccagcgtcactgtggttgagagc 840 Query: 361 ttgatgatggccattgcaagtgtcatacccaatttcctcatgggcatcatcataggagct 420 |||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||||| Sbjct: 841 ttgatgatggccattgcaagtgtcatccctaatttcctcatggggatcattataggagct 900 Query: 421 ggaattcagggaatattcatgcttgtctctggatacttcagacttccgtatgacat 476 || |||||||||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 901 gggattcagggaatatttatgcttgtctctggatactttagacttccttacgacat 956
>dbj|AK070486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048A10, full insert sequence Length = 1770 Score = 500 bits (252), Expect = e-138 Identities = 420/476 (88%) Strand = Plus / Plus Query: 1 tatctccttgtcaccgtctgcatcggcacaatctacctggatgttggcaccaaatacaca 60 |||||||| || ||||||||||| ||||| |||||| || || |||||||| |||||| Sbjct: 785 tatctcctcgtgaccgtctgcattggcaccatctactatgacgtcggcaccaagtacaca 844 Query: 61 tccatcctggccagggcagcatgtgcagcattcgtctttggattcgtcaccttcatgtcc 120 ||||||||||| ||||| || ||| | ||||||||||| ||||||||||| |||||||| Sbjct: 845 tccatcctggctagggctgcctgtaccgcattcgtcttcggattcgtcactttcatgtca 904 Query: 121 attggaggattcccttcattcgtggaagaaatgaaggtcttccagcgggagcggctgaat 180 |||||||| |||||||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 905 attggagggttcccttcatctgttgaagaaatgaaggttttccaaagggagcggctgaat 964 Query: 181 gggcactacggtgttgcagcatttgtcattgccaacaccatctcggctctgccattcctg 240 ||||| |||||||| || || |||||||| |||||| |||||||| ||||||||| || Sbjct: 965 gggcattacggtgtcgcggcttttgtcatcagcaacacaatctcggcgctgccattcttg 1024 Query: 241 gtcctgatatgcttcctgtcagggacagtatgctacttcatggtgcgccttcatcctggt 300 ||||||||||||||| |||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 1025 gtcctgatatgcttcttgtcagggaccatatgctacttcatggtgcgccttcacccaggt 1084 Query: 301 ttctcacactacatcttcttcgtcttgaacctctacgccagtgtcaccgtggttgagagc 360 ||||| ||||||||||||||||| | |||| ||||||||| ||||| |||||||||||| Sbjct: 1085 ttctcccactacatcttcttcgttctcaacccctacgccagcgtcactgtggttgagagc 1144 Query: 361 ttgatgatggccattgcaagtgtcatacccaatttcctcatgggcatcatcataggagct 420 |||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||||| Sbjct: 1145 ttgatgatggccattgcaagtgtcatccctaatttcctcatggggatcattataggagct 1204 Query: 421 ggaattcagggaatattcatgcttgtctctggatacttcagacttccgtatgacat 476 || |||||||||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 1205 gggattcagggaatatttatgcttgtctctggatactttagacttccttacgacat 1260
>gb|AY105484.1| Zea mays PCO068684 mRNA sequence Length = 634 Score = 418 bits (211), Expect = e-114 Identities = 361/411 (87%) Strand = Plus / Plus Query: 69 ggccagggcagcatgtgcagcattcgtctttggattcgtcaccttcatgtccattggagg 128 ||||||||| || ||| | || ||||||||||| ||||| || ||||||||||||||||| Sbjct: 7 ggccagggctgcctgttccgcgttcgtctttgggttcgttacgttcatgtccattggagg 66 Query: 129 attcccttcattcgtggaagaaatgaaggtcttccagcgggagcggctgaatgggcacta 188 ||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 67 attcccttcgttcgttgaagaaatgaaggtcttccagcgggaacggctgaacgggcacta 126 Query: 189 cggtgttgcagcatttgtcattgccaacaccatctcggctctgccattcctggtcctgat 248 |||||| || || |||||||| ||||||||||||||| ||| |||||| | ||||| Sbjct: 127 cggtgtcgcggcgtttgtcatcagcaacaccatctcggcaacgccgttcctgattctgat 186 Query: 249 atgcttcctgtcagggacagtatgctacttcatggtgcgccttcatcctggtttctcaca 308 ||||||| |||| || || |||||||||||||||||||||| |||||||| ||| || Sbjct: 187 atgcttcttgtcgggaaccatatgctacttcatggtgcgcctccatcctggcttcgagca 246 Query: 309 ctacatcttcttcgtcttgaacctctacgccagtgtcaccgtggttgagagcttgatgat 368 |||||||||||||||||||||||| |||||||| || || ||||| |||||||||||||| Sbjct: 247 ctacatcttcttcgtcttgaacctgtacgccagcgttacggtggtcgagagcttgatgat 306 Query: 369 ggccattgcaagtgtcatacccaatttcctcatgggcatcatcataggagctggaattca 428 ||| ||||| |||||||| ||||||||||||||||| ||||||||||| || || ||||| Sbjct: 307 ggcgattgccagtgtcattcccaatttcctcatgggtatcatcataggggccgggattca 366 Query: 429 gggaatattcatgcttgtctctggatacttcagacttccgtatgacatccc 479 ||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 367 gggaatattcatgctggtctctggctacttcagacttccatacgacatccc 417
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 317 bits (160), Expect = 2e-83 Identities = 238/264 (90%) Strand = Plus / Plus Query: 167 gggagcggctgaatgggcactacggtgttgcagcatttgtcattgccaacaccatctcgg 226 ||||||||||||||||||| |||||||| || || |||||||| |||||| ||||||| Sbjct: 26373306 gggagcggctgaatgggcattacggtgtcgcggcttttgtcatcagcaacacaatctcgg 26373365 Query: 227 ctctgccattcctggtcctgatatgcttcctgtcagggacagtatgctacttcatggtgc 286 | ||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 26373366 cgctgccattcttggtcctgatatgcttcttgtcagggaccatatgctacttcatggtgc 26373425 Query: 287 gccttcatcctggtttctcacactacatcttcttcgtcttgaacctctacgccagtgtca 346 ||||||| || |||||||| ||||||||||||||||| | |||||||||||||| |||| Sbjct: 26373426 gccttcacccaggtttctcccactacatcttcttcgttctcaacctctacgccagcgtca 26373485 Query: 347 ccgtggttgagagcttgatgatggccattgcaagtgtcatacccaatttcctcatgggca 406 | |||||||||||||||||||||||||||||||||||||| || |||||||||||||| | Sbjct: 26373486 ctgtggttgagagcttgatgatggccattgcaagtgtcatccctaatttcctcatgggga 26373545 Query: 407 tcatcataggagctggaattcagg 430 |||| ||||||||||| ||||||| Sbjct: 26373546 tcattataggagctgggattcagg 26373569 Score = 93.7 bits (47), Expect = 5e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 88 gcattcgtctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaa 147 ||||||||||| ||||||||||| |||||||| |||||||| ||||||||||| || ||| Sbjct: 26373146 gcattcgtcttcggattcgtcactttcatgtcaattggagggttcccttcatttgttgaa 26373205 Query: 148 gaaatgaaggt 158 ||||||||||| Sbjct: 26373206 gaaatgaaggt 26373216 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 428 agggaatattcatgcttgtctctggatacttcagacttccgtatgacat 476 |||||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 26374164 agggaatatttatgcttgtctctggatactttagacttccttacgacat 26374212 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1 tatctccttgtcaccgtctgcatcggcacaatctacctggatgttggcaccaaatacaca 60 |||||||| || ||||||||||| ||||| |||||| || || |||||||| |||||| Sbjct: 26372911 tatctcctcgtgaccgtctgcattggcaccatctactatgacgtcggcaccaagtacaca 26372970 Query: 61 tccatcctgg 70 |||||||||| Sbjct: 26372971 tccatcctgg 26372980
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 317 bits (160), Expect = 2e-83 Identities = 238/264 (90%) Strand = Plus / Plus Query: 167 gggagcggctgaatgggcactacggtgttgcagcatttgtcattgccaacaccatctcgg 226 ||||||||||||||||||| |||||||| || || |||||||| |||||| ||||||| Sbjct: 13939 gggagcggctgaatgggcattacggtgtcgcggcttttgtcatcagcaacacaatctcgg 13998 Query: 227 ctctgccattcctggtcctgatatgcttcctgtcagggacagtatgctacttcatggtgc 286 | ||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 13999 cgctgccattcttggtcctgatatgcttcttgtcagggaccatatgctacttcatggtgc 14058 Query: 287 gccttcatcctggtttctcacactacatcttcttcgtcttgaacctctacgccagtgtca 346 ||||||| || |||||||| ||||||||||||||||| | |||||||||||||| |||| Sbjct: 14059 gccttcacccaggtttctcccactacatcttcttcgttctcaacctctacgccagcgtca 14118 Query: 347 ccgtggttgagagcttgatgatggccattgcaagtgtcatacccaatttcctcatgggca 406 | |||||||||||||||||||||||||||||||||||||| || |||||||||||||| | Sbjct: 14119 ctgtggttgagagcttgatgatggccattgcaagtgtcatccctaatttcctcatgggga 14178 Query: 407 tcatcataggagctggaattcagg 430 |||| ||||||||||| ||||||| Sbjct: 14179 tcattataggagctgggattcagg 14202 Score = 93.7 bits (47), Expect = 5e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 88 gcattcgtctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaa 147 ||||||||||| ||||||||||| |||||||| |||||||| ||||||||||| || ||| Sbjct: 13779 gcattcgtcttcggattcgtcactttcatgtcaattggagggttcccttcatttgttgaa 13838 Query: 148 gaaatgaaggt 158 ||||||||||| Sbjct: 13839 gaaatgaaggt 13849 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 428 agggaatattcatgcttgtctctggatacttcagacttccgtatgacat 476 |||||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 14797 agggaatatttatgcttgtctctggatactttagacttccttacgacat 14845 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 1 tatctccttgtcaccgtctgcatcggcacaatctacctggatgttggcaccaaatacaca 60 |||||||| || ||||||||||| ||||| |||||| || || |||||||| |||||| Sbjct: 13544 tatctcctcgtgaccgtctgcattggcaccatctactatgacgtcggcaccaagtacaca 13603 Query: 61 tccatcctgg 70 |||||||||| Sbjct: 13604 tccatcctgg 13613
>ref|NM_197150.1| Oryza sativa (japonica cultivar-group) putative ABC transporter (OSJNBa0041P03.4), mRNA Length = 2284 Score = 262 bits (132), Expect = 1e-66 Identities = 381/464 (82%) Strand = Plus / Plus Query: 16 gtctgcatcggcacaatctacctggatgttggcaccaaatacacatccatcctggccagg 75 ||||||||||| ||||||||||| |||||||||||| ||||| || || ||||| || Sbjct: 1303 gtctgcatcgggacaatctacctcaatgttggcaccagatacagctcaattctggcaaga 1362 Query: 76 gcagcatgtgcagcattcgtctttggattcgtcaccttcatgtccattggaggattccct 135 | |||||||| | |||||||| || || ||||| |||||||| |||||||||||||| Sbjct: 1363 ggtgcatgtgcttctttcgtcttcggctttgtcacgttcatgtcgattggaggattcccg 1422 Query: 136 tcattcgtggaagaaatgaaggtcttccagcgggagcggctgaatgggcactacggtgtt 195 || || |||||||| |||||||| || ||| | ||| |||| ||||||||||| || || Sbjct: 1423 tcttttgtggaagacatgaaggtgtttcagagagagaggctcaatgggcactatggcgtg 1482 Query: 196 gcagcatttgtcattgccaacaccatctcggctctgccattcctggtcctgatatgcttc 255 ||||| || || |||||| |||||||| |||||||| || || |||| |||| Sbjct: 1483 ctggcattcgtgataagcaacacgatctcggcaatgccattcttgatcttgatcaccttc 1542 Query: 256 ctgtcagggacagtatgctacttcatggtgcgccttcatcctggtttctcacactacatc 315 | || |||||| | |||||||||||||||||||| || || || ||| | |||||| || Sbjct: 1543 atctccgggacaatgtgctacttcatggtgcgcctccacccgggcttcacgcactacctc 1602 Query: 316 ttcttcgtcttgaacctctacgccagtgtcaccgtggttgagagcttgatgatggccatt 375 ||||||||| | ||||||||| || |||||||| || ||||||||||||||||||||| Sbjct: 1603 ttcttcgtcctctgcctctacgcaagcgtcaccgtcgtcgagagcttgatgatggccatt 1662 Query: 376 gcaagtgtcatacccaatttcctcatgggcatcatcataggagctggaattcagggaata 435 || |||||||| ||||| |||||||||||||||||||| || || ||||||||||| ||| Sbjct: 1663 gccagtgtcatccccaacttcctcatgggcatcatcatcggtgcaggaattcaggggata 1722 Query: 436 ttcatgcttgtctctggatacttcagacttccgtatgacatccc 479 |||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 1723 ttcatgctggtttcaggatacttcaggcttccccatgacatccc 1766
>dbj|AK072452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121D13, full insert sequence Length = 2554 Score = 254 bits (128), Expect = 2e-64 Identities = 380/464 (81%) Strand = Plus / Plus Query: 16 gtctgcatcggcacaatctacctggatgttggcaccaaatacacatccatcctggccagg 75 ||||||||||| ||||||||||| |||||||||||| ||||| || || ||||| || Sbjct: 1419 gtctgcatcgggacaatctacctcaatgttggcaccagatacagctcaattctggcaaga 1478 Query: 76 gcagcatgtgcagcattcgtctttggattcgtcaccttcatgtccattggaggattccct 135 | |||||||| | |||||||| || || ||||| |||||||| |||||||||||||| Sbjct: 1479 ggtgcatgtgcttctttcgtcttcggctttgtcacgttcatgtcgattggaggattcccg 1538 Query: 136 tcattcgtggaagaaatgaaggtcttccagcgggagcggctgaatgggcactacggtgtt 195 || || |||||||| |||||||| || ||| | ||| |||| ||||||||||| || || Sbjct: 1539 tcttttgtggaagacatgaaggtgtttcagagagagaggctcaatgggcactatggcgtg 1598 Query: 196 gcagcatttgtcattgccaacaccatctcggctctgccattcctggtcctgatatgcttc 255 ||||| || || |||||| |||||||| |||||||| || || |||| |||| Sbjct: 1599 ctggcattcgtgataagcaacacgatctcggcaatgccattcttgatcttgatcaccttc 1658 Query: 256 ctgtcagggacagtatgctacttcatggtgcgccttcatcctggtttctcacactacatc 315 | || |||||| | |||||||||||||||||||| || || || ||| | |||||| || Sbjct: 1659 atctccgggacaatgtgctacttcatggtgcgcctccacccgggcttcacgcactacctc 1718 Query: 316 ttcttcgtcttgaacctctacgccagtgtcaccgtggttgagagcttgatgatggccatt 375 ||||||||| | ||||||||| || |||||||| || ||||||||||||||||||||| Sbjct: 1719 ttcttcgtcctctgcctctacgcaagcgtcaccgtcgtcgagagcttgatgatggccatt 1778 Query: 376 gcaagtgtcatacccaatttcctcatgggcatcatcataggagctggaattcagggaata 435 || |||||||| ||||| |||||||||||||||||||| || || ||||||||||| || Sbjct: 1779 gccagtgtcatccccaacttcctcatgggcatcatcatcggtgcaggaattcaggggatg 1838 Query: 436 ttcatgcttgtctctggatacttcagacttccgtatgacatccc 479 |||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 1839 ttcatgctggtttcaggatacttcaggcttccccatgacatccc 1882
>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete sequence Length = 139614 Score = 155 bits (78), Expect = 2e-34 Identities = 183/218 (83%) Strand = Plus / Minus Query: 213 caacaccatctcggctctgccattcctggtcctgatatgcttcctgtcagggacagtatg 272 |||||| |||||||| |||||||| || || |||| |||| | || |||||| | || Sbjct: 77551 caacacgatctcggcaatgccattcttgatcttgatcaccttcatctccgggacaatgtg 77492 Query: 273 ctacttcatggtgcgccttcatcctggtttctcacactacatcttcttcgtcttgaacct 332 |||||||||||||||||| || || || ||| | |||||| ||||||||||| | ||| Sbjct: 77491 ctacttcatggtgcgcctccacccgggcttcacgcactacctcttcttcgtcctctgcct 77432 Query: 333 ctacgccagtgtcaccgtggttgagagcttgatgatggccattgcaagtgtcatacccaa 392 |||||| || |||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct: 77431 ctacgcaagcgtcaccgtcgtcgagagcttgatgatggccattgccagtgtcatccccaa 77372 Query: 393 tttcctcatgggcatcatcataggagctggaattcagg 430 |||||||||||||||||||| || || |||||||||| Sbjct: 77371 cttcctcatgggcatcatcatcggtgcaggaattcagg 77334 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 91 ttcgtctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaagaa 150 |||||||| || || ||||| |||||||| |||||||||||||| || || |||||||| Sbjct: 77765 ttcgtcttcggctttgtcacgttcatgtcgattggaggattcccgtcttttgtggaagac 77706 Query: 151 atgaaggt 158 |||||||| Sbjct: 77705 atgaaggt 77698 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 16 gtctgcatcggcacaatctacctggatgttggcaccaaataca 58 ||||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 77968 gtctgcatcgggacaatctacctcaatgttggcaccagataca 77926 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 427 cagggaatattcatgcttgtctctggatacttcagacttccgtatgacatccc 479 ||||| ||||||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 77126 caggggatattcatgctggtttcaggatacttcaggcttccccatgacatccc 77074
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 155 bits (78), Expect = 2e-34 Identities = 183/218 (83%) Strand = Plus / Plus Query: 213 caacaccatctcggctctgccattcctggtcctgatatgcttcctgtcagggacagtatg 272 |||||| |||||||| |||||||| || || |||| |||| | || |||||| | || Sbjct: 18273619 caacacgatctcggcaatgccattcttgatcttgatcaccttcatctccgggacaatgtg 18273678 Query: 273 ctacttcatggtgcgccttcatcctggtttctcacactacatcttcttcgtcttgaacct 332 |||||||||||||||||| || || || ||| | |||||| ||||||||||| | ||| Sbjct: 18273679 ctacttcatggtgcgcctccacccgggcttcacgcactacctcttcttcgtcctctgcct 18273738 Query: 333 ctacgccagtgtcaccgtggttgagagcttgatgatggccattgcaagtgtcatacccaa 392 |||||| || |||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct: 18273739 ctacgcaagcgtcaccgtcgtcgagagcttgatgatggccattgccagtgtcatccccaa 18273798 Query: 393 tttcctcatgggcatcatcataggagctggaattcagg 430 |||||||||||||||||||| || || |||||||||| Sbjct: 18273799 cttcctcatgggcatcatcatcggtgcaggaattcagg 18273836 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 91 ttcgtctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaagaa 150 |||||||| || || ||||| |||||||| |||||||||||||| || || |||||||| Sbjct: 18273405 ttcgtcttcggctttgtcacgttcatgtcgattggaggattcccgtcttttgtggaagac 18273464 Query: 151 atgaaggt 158 |||||||| Sbjct: 18273465 atgaaggt 18273472 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 16 gtctgcatcggcacaatctacctggatgttggcaccaaataca 58 ||||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 18273202 gtctgcatcgggacaatctacctcaatgttggcaccagataca 18273244 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 427 cagggaatattcatgcttgtctctggatacttcagacttccgtatgacatccc 479 ||||| ||||||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 18274044 caggggatattcatgctggtttcaggatacttcaggcttccccatgacatccc 18274096
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 155 bits (78), Expect = 2e-34 Identities = 183/218 (83%) Strand = Plus / Plus Query: 213 caacaccatctcggctctgccattcctggtcctgatatgcttcctgtcagggacagtatg 272 |||||| |||||||| |||||||| || || |||| |||| | || |||||| | || Sbjct: 18282872 caacacgatctcggcaatgccattcttgatcttgatcaccttcatctccgggacaatgtg 18282931 Query: 273 ctacttcatggtgcgccttcatcctggtttctcacactacatcttcttcgtcttgaacct 332 |||||||||||||||||| || || || ||| | |||||| ||||||||||| | ||| Sbjct: 18282932 ctacttcatggtgcgcctccacccgggcttcacgcactacctcttcttcgtcctctgcct 18282991 Query: 333 ctacgccagtgtcaccgtggttgagagcttgatgatggccattgcaagtgtcatacccaa 392 |||||| || |||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct: 18282992 ctacgcaagcgtcaccgtcgtcgagagcttgatgatggccattgccagtgtcatccccaa 18283051 Query: 393 tttcctcatgggcatcatcataggagctggaattcagg 430 |||||||||||||||||||| || || |||||||||| Sbjct: 18283052 cttcctcatgggcatcatcatcggtgcaggaattcagg 18283089 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 91 ttcgtctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaagaa 150 |||||||| || || ||||| |||||||| |||||||||||||| || || |||||||| Sbjct: 18282658 ttcgtcttcggctttgtcacgttcatgtcgattggaggattcccgtcttttgtggaagac 18282717 Query: 151 atgaaggt 158 |||||||| Sbjct: 18282718 atgaaggt 18282725 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 16 gtctgcatcggcacaatctacctggatgttggcaccaaataca 58 ||||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 18282455 gtctgcatcgggacaatctacctcaatgttggcaccagataca 18282497 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 427 cagggaatattcatgcttgtctctggatacttcagacttccgtatgacatccc 479 ||||| ||||||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 18283297 caggggatattcatgctggtttcaggatacttcaggcttccccatgacatccc 18283349
>gb|AY255521.1| Gossypium hirsutum ABC transporter (WBC1) mRNA, complete cds Length = 2372 Score = 147 bits (74), Expect = 4e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 340 agtgtcaccgtggttgagagcttgatgatggccattgcaagtgtcatacccaatttcctc 399 ||||| || ||||||||||||||||||||||||||||| ||| || | |||||||||||| Sbjct: 1613 agtgttactgtggttgagagcttgatgatggccattgccagtatcgtccccaatttcctc 1672 Query: 400 atgggcatcatcataggagctggaattcagggaatattcatgcttgtctctggatacttc 459 ||||| ||||||| |||||| || ||||||||||||||||||||||| ||||| |||||| Sbjct: 1673 atggggatcatcacaggagcagggattcagggaatattcatgcttgtttctggctacttc 1732 Query: 460 ag 461 || Sbjct: 1733 ag 1734
>ref|NM_101647.3| Arabidopsis thaliana ATPase, coupled to transmembrane movement of substances AT1G17840 mRNA, complete cds Length = 2999 Score = 137 bits (69), Expect = 4e-29 Identities = 309/389 (79%) Strand = Plus / Plus Query: 91 ttcgtctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaagaa 150 ||||||||||| || || || |||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 1575 ttcgtctttggctttgtaacattcatgtcaattggtggatttccttcgttcgttgaagac 1634 Query: 151 atgaaggtcttccagcgggagcggctgaatgggcactacggtgttgcagcatttgtcatt 210 |||||||||||||| | ||| | || || |||||||| || || || || ||||| || Sbjct: 1635 atgaaggtcttccaaagagagagactaaacgggcactatggagtagctgcgtttgtgata 1694 Query: 211 gccaacaccatctcggctctgccattcctggtcctgatatgcttcctgtcagggacagta 270 |||||||| | || || ||||||||| || ||||| ||| | || |||||| | Sbjct: 1695 gccaacacattatctgcaacaccattcctgatcatgataactttcatctccgggacaatc 1754 Query: 271 tgctacttcatggtgcgccttcatcctggtttctcacactacatcttcttcgtcttgaac 330 || |||||||||||| | || ||||| || ||| | |||||| ||||||| || | | Sbjct: 1755 tgttacttcatggtgggtctgcatccaggattcactcactacctcttctttgttctctgc 1814 Query: 331 ctctacgccagtgtcaccgtggttgagagcttgatgatggccattgcaagtgtcataccc 390 ||||| || ||||||||||| || |||||||| |||||||| ||||| ||| | | ||| Sbjct: 1815 ctctatgcaagtgtcaccgttgtggagagcttaatgatggcaattgctagtattgttccc 1874 Query: 391 aatttcctcatgggcatcatcataggagctggaattcagggaatattcatgcttgtctct 450 || ||||||||||| |||||||| ||||||||||| ||||| || |||||||| || ||| Sbjct: 1875 aacttcctcatgggtatcatcatcggagctggaatccaggggatcttcatgctggtttct 1934 Query: 451 ggatacttcagacttccgtatgacatccc 479 |||| |||||| ||||| |||||||||| Sbjct: 1935 ggattcttcaggcttccaaatgacatccc 1963
>gb|AY150457.1| Arabidopsis thaliana putative ABC transporter protein (At1g17840) mRNA, complete cds Length = 2143 Score = 137 bits (69), Expect = 4e-29 Identities = 309/389 (79%) Strand = Plus / Plus Query: 91 ttcgtctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaagaa 150 ||||||||||| || || || |||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 1315 ttcgtctttggctttgtaacattcatgtcaattggtggatttccttcgttcgttgaagac 1374 Query: 151 atgaaggtcttccagcgggagcggctgaatgggcactacggtgttgcagcatttgtcatt 210 |||||||||||||| | ||| | || || |||||||| || || || || ||||| || Sbjct: 1375 atgaaggtcttccaaagagagagactaaacgggcactatggagtagctgcgtttgtgata 1434 Query: 211 gccaacaccatctcggctctgccattcctggtcctgatatgcttcctgtcagggacagta 270 |||||||| | || || ||||||||| || ||||| ||| | || |||||| | Sbjct: 1435 gccaacacattatctgcaacaccattcctgatcatgataactttcatctccgggacaatc 1494 Query: 271 tgctacttcatggtgcgccttcatcctggtttctcacactacatcttcttcgtcttgaac 330 || |||||||||||| | || ||||| || ||| | |||||| ||||||| || | | Sbjct: 1495 tgttacttcatggtgggtctgcatccaggattcactcactacctcttctttgttctctgc 1554 Query: 331 ctctacgccagtgtcaccgtggttgagagcttgatgatggccattgcaagtgtcataccc 390 ||||| || ||||||||||| || |||||||| |||||||| ||||| ||| | | ||| Sbjct: 1555 ctctatgcaagtgtcaccgttgtggagagcttaatgatggcaattgctagtattgttccc 1614 Query: 391 aatttcctcatgggcatcatcataggagctggaattcagggaatattcatgcttgtctct 450 || ||||||||||| |||||||| ||||||||||| ||||| || |||||||| || ||| Sbjct: 1615 aacttcctcatgggtatcatcatcggagctggaatccaggggatcttcatgctggtttct 1674 Query: 451 ggatacttcagacttccgtatgacatccc 479 |||| |||||| ||||| |||||||||| Sbjct: 1675 ggattcttcaggcttccaaatgacatccc 1703
>gb|AY080792.1| Arabidopsis thaliana putative ABC transporter protein (At1g17840) mRNA, complete cds Length = 2652 Score = 137 bits (69), Expect = 4e-29 Identities = 309/389 (79%) Strand = Plus / Plus Query: 91 ttcgtctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaagaa 150 ||||||||||| || || || |||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 1562 ttcgtctttggctttgtaacattcatgtcaattggtggatttccttcgttcgttgaagac 1621 Query: 151 atgaaggtcttccagcgggagcggctgaatgggcactacggtgttgcagcatttgtcatt 210 |||||||||||||| | ||| | || || |||||||| || || || || ||||| || Sbjct: 1622 atgaaggtcttccaaagagagagactaaacgggcactatggagtagctgcgtttgtgata 1681 Query: 211 gccaacaccatctcggctctgccattcctggtcctgatatgcttcctgtcagggacagta 270 |||||||| | || || ||||||||| || ||||| ||| | || |||||| | Sbjct: 1682 gccaacacattatctgcaacaccattcctgatcatgataactttcatctccgggacaatc 1741 Query: 271 tgctacttcatggtgcgccttcatcctggtttctcacactacatcttcttcgtcttgaac 330 || |||||||||||| | || ||||| || ||| | |||||| ||||||| || | | Sbjct: 1742 tgttacttcatggtgggtctgcatccaggattcactcactacctcttctttgttctctgc 1801 Query: 331 ctctacgccagtgtcaccgtggttgagagcttgatgatggccattgcaagtgtcataccc 390 ||||| || ||||||||||| || |||||||| |||||||| ||||| ||| | | ||| Sbjct: 1802 ctctatgcaagtgtcaccgttgtggagagcttaatgatggcaattgctagtattgttccc 1861 Query: 391 aatttcctcatgggcatcatcataggagctggaattcagggaatattcatgcttgtctct 450 || ||||||||||| |||||||| ||||||||||| ||||| || |||||||| || ||| Sbjct: 1862 aacttcctcatgggtatcatcatcggagctggaatccaggggatcttcatgctggtttct 1921 Query: 451 ggatacttcagacttccgtatgacatccc 479 |||| |||||| ||||| |||||||||| Sbjct: 1922 ggattcttcaggcttccaaatgacatccc 1950
>gb|AY955197.1| Arabidopsis halleri subsp. gemmifera white-brown complex protein 11 (WBC11) mRNA, partial cds Length = 2060 Score = 121 bits (61), Expect = 2e-24 Identities = 307/389 (78%) Strand = Plus / Plus Query: 91 ttcgtctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaagaa 150 ||||||||||| || || || |||||||| ||||| ||||| ||||| || || ||||| Sbjct: 1291 ttcgtctttggctttgtaacattcatgtcaattggtggatttccttcgtttgttgaagac 1350 Query: 151 atgaaggtcttccagcgggagcggctgaatgggcactacggtgttgcagcatttgtcatt 210 |||||||||||||| | ||| | || || |||||||| || || || || ||||| || Sbjct: 1351 atgaaggtcttccaaagagagagactaaacgggcactatggagtagctgcgtttgtgata 1410 Query: 211 gccaacaccatctcggctctgccattcctggtcctgatatgcttcctgtcagggacagta 270 |||||||| | || || ||||||||| || ||||| ||| | || |||||| | Sbjct: 1411 gccaacacattatctgcaacgccattccttatcatgataactttcatctccgggacaatc 1470 Query: 271 tgctacttcatggtgcgccttcatcctggtttctcacactacatcttcttcgtcttgaac 330 || |||||||||||| | || ||||| || ||| | |||||| ||||||| || | | Sbjct: 1471 tgttacttcatggtgggtctgcatccaggattcactcactacctcttctttgttctctgc 1530 Query: 331 ctctacgccagtgtcaccgtggttgagagcttgatgatggccattgcaagtgtcataccc 390 ||||| || ||||||||||| || |||||||| |||||||| || || ||| | | ||| Sbjct: 1531 ctctatgcaagtgtcaccgttgtagagagcttaatgatggcgatagctagtattgttccc 1590 Query: 391 aatttcctcatgggcatcatcataggagctggaattcagggaatattcatgcttgtctct 450 || ||||||||||| |||||||| ||||||||||| ||||| || |||||||| || ||| Sbjct: 1591 aacttcctcatgggtatcatcatcggagctggaatccaggggatcttcatgctggtttct 1650 Query: 451 ggatacttcagacttccgtatgacatccc 479 |||| |||||| ||||| |||||||||| Sbjct: 1651 ggattcttcaggcttccaaatgacatccc 1679
>gb|AC034106.4|F2H15 Sequence of BAC F2H15 from Arabidopsis thaliana chromosome 1, complete sequence Length = 75133 Score = 81.8 bits (41), Expect = 2e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 274 tacttcatggtgcgccttcatcctggtttctcacactacatcttcttcgtcttgaacctc 333 |||||||||||| | || ||||| || ||| | |||||| ||||||| || | |||| Sbjct: 26104 tacttcatggtgggtctgcatccaggattcactcactacctcttctttgttctctgcctc 26163 Query: 334 tacgccagtgtcaccgtggttgagagcttgatgatggccattgcaagtgtcatacccaat 393 || || ||||||||||| || |||||||| |||||||| ||||| ||| | | ||||| Sbjct: 26164 tatgcaagtgtcaccgttgtggagagcttaatgatggcaattgctagtattgttcccaac 26223 Query: 394 ttcctcatgggcatcatcataggagctggaattcagg 430 ||||||||||| |||||||| ||||||||||| |||| Sbjct: 26224 ttcctcatgggtatcatcatcggagctggaatccagg 26260 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 91 ttcgtctttggattcgtcaccttcatgtccattggaggattcccttcattcgtggaagaa 150 ||||||||||| || || || |||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 25840 ttcgtctttggctttgtaacattcatgtcaattggtggatttccttcgttcgttgaagac 25899 Query: 151 atgaaggt 158 |||||||| Sbjct: 25900 atgaaggt 25907
>ref|NM_113003.3| Arabidopsis thaliana ATPase, coupled to transmembrane movement of substances AT3G21090 mRNA, complete cds Length = 2241 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgtggaagaaatgaaggt 158 ||||||||||||||||| |||||||| ||| | |||||||||||||| Sbjct: 1376 ttcatgtccattggaggcttcccttctttcctcgaagaaatgaaggt 1422
>gb|BT000405.1| Arabidopsis thaliana unknown protein (At3g21090) mRNA, complete cds Length = 2114 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgtggaagaaatgaaggt 158 ||||||||||||||||| |||||||| ||| | |||||||||||||| Sbjct: 1270 ttcatgtccattggaggcttcccttctttcctcgaagaaatgaaggt 1316
>gb|AY093054.1| Arabidopsis thaliana unknown protein (At3g21090) mRNA, complete cds Length = 2240 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgtggaagaaatgaaggt 158 ||||||||||||||||| |||||||| ||| | |||||||||||||| Sbjct: 1376 ttcatgtccattggaggcttcccttctttcctcgaagaaatgaaggt 1422
>dbj|AP000604.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSA6 Length = 63748 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 112 ttcatgtccattggaggattcccttcattcgtggaagaaatgaaggt 158 ||||||||||||||||| |||||||| ||| | |||||||||||||| Sbjct: 38102 ttcatgtccattggaggcttcccttctttcctcgaagaaatgaaggt 38056
>dbj|AK107445.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-128-B10, full insert sequence Length = 1874 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1 tatctccttgtcaccgtctgcatcggcacaatctacctggatgttggcaccaaatacaca 60 |||||||| || ||||||||||| ||||| |||||| || || |||||||| |||||| Sbjct: 477 tatctcctcgtgaccgtctgcattggcaccatctactatgacgtcggcaccaagtacaca 418 Query: 61 tccatcc 67 ||||||| Sbjct: 417 tccatcc 411
>dbj|AK101159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027K17, full insert sequence Length = 1627 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1 tatctccttgtcaccgtctgcatcggcacaatctacctggatgttggcaccaaatacaca 60 |||||||| || ||||||||||| ||||| |||||| || || |||||||| |||||| Sbjct: 1186 tatctcctcgtgaccgtctgcattggcaccatctactatgacgtcggcaccaagtacaca 1127 Query: 61 tccatcc 67 ||||||| Sbjct: 1126 tccatcc 1120
>ref|NM_104028.2| Arabidopsis thaliana CER5 (ECERIFERUM 5); ATPase, coupled to transmembrane movement of substances AT1G51500 (CER5) mRNA, complete cds Length = 2329 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgtggaagaaatgaa 155 ||||||||||||||||| || ||||| ||| | ||||||||||| Sbjct: 1368 ttcatgtccattggagggtttccttctttcattgaagaaatgaa 1411
>gb|BT008427.1| Arabidopsis thaliana At1g51560 gene, complete cds Length = 2064 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgtggaagaaatgaa 155 ||||||||||||||||| || ||||| ||| | ||||||||||| Sbjct: 1273 ttcatgtccattggagggtttccttctttcattgaagaaatgaa 1316
>gb|AY093162.1| Arabidopsis thaliana ATP-dependent transmembrane transporter, putative (At1g51500) mRNA, complete cds Length = 2263 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgtggaagaaatgaa 155 ||||||||||||||||| || ||||| ||| | ||||||||||| Sbjct: 1358 ttcatgtccattggagggtttccttctttcattgaagaaatgaa 1401
>gb|AF412079.1|AF412079 Arabidopsis thaliana At1g51500/F5D21_6 mRNA, complete cds Length = 2308 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgtggaagaaatgaa 155 ||||||||||||||||| || ||||| ||| | ||||||||||| Sbjct: 1368 ttcatgtccattggagggtttccttctttcattgaagaaatgaa 1411
>gb|AC024261.6|AC024261 Arabidopsis thaliana chromosome 1 BAC F5D21 genomic sequence, complete sequence Length = 92652 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgtggaagaaatgaa 155 ||||||||||||||||| || ||||| ||| | ||||||||||| Sbjct: 41625 ttcatgtccattggagggtttccttctttcattgaagaaatgaa 41668
>gb|AY734542.1| Arabidopsis thaliana ABC transporter CER5 gene, complete cds Length = 3396 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgtggaagaaatgaa 155 ||||||||||||||||| || ||||| ||| | ||||||||||| Sbjct: 1905 ttcatgtccattggagggtttccttctttcattgaagaaatgaa 1948
>emb|AJ534326.1|CIN534326 Ciona intestinalis partial mRNA for Cic protein Length = 1167 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 124 ggaggattcccttcattcgtggaaga 149 |||||||||||||||| ||||||||| Sbjct: 446 ggaggattcccttcatccgtggaaga 421
>dbj|AK067639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108J11, full insert sequence Length = 2643 Score = 44.1 bits (22), Expect = 0.42 Identities = 34/38 (89%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgtggaaga 149 |||||| | ||||||||||||||||| ||||| ||||| Sbjct: 1534 ttcatggcaattggaggattcccttctttcgtagaaga 1571
>gb|AE007306.1| Sinorhizobium meliloti 1021 plasmid pSymA section 112 of 121 of the complete plasmid sequence Length = 11758 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 tgcagcattcgtctttggatt 104 ||||||||||||||||||||| Sbjct: 3112 tgcagcattcgtctttggatt 3092
>ref|NM_001006767.1| Xenopus tropicalis cyclin A1 (ccna1), mRNA Length = 1674 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 gcagcatttgtcattgccaac 216 ||||||||||||||||||||| Sbjct: 1098 gcagcatttgtcattgccaac 1118
>gb|BC075562.1| Xenopus tropicalis cyclin A1, mRNA (cDNA clone MGC:89518 IMAGE:6992825), complete cds Length = 1674 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 gcagcatttgtcattgccaac 216 ||||||||||||||||||||| Sbjct: 1098 gcagcatttgtcattgccaac 1118
>emb|CR926264.1| Xenopus tropicalis finished cDNA, clone TEgg108l20 Length = 780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 gcagcatttgtcattgccaac 216 ||||||||||||||||||||| Sbjct: 230 gcagcatttgtcattgccaac 250
>gb|AC132596.5| Mus musculus BAC clone RP24-173K19 from chromosome 12, complete sequence Length = 183629 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 gggaatattcatgcttgtct 448 |||||||||||||||||||| Sbjct: 63263 gggaatattcatgcttgtct 63244
>emb|CR846230.2| Takifugu rubripes DNA, highly conserved vertebrate non-coding sequence, element ID CNE126 Length = 425 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gcagcatttgtcattgccaa 215 |||||||||||||||||||| Sbjct: 339 gcagcatttgtcattgccaa 320
>gb|AC113404.3| Homo sapiens chromosome 5 clone RP11-466P24, complete sequence Length = 197591 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tgagagcttgatgatggcca 373 |||||||||||||||||||| Sbjct: 86727 tgagagcttgatgatggcca 86708
>gb|AC096737.3| Homo sapiens BAC clone RP11-178N2 from 4, complete sequence Length = 166192 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 aatattcatgcttgtctctg 451 |||||||||||||||||||| Sbjct: 140548 aatattcatgcttgtctctg 140529
>gb|AC026783.5| Homo sapiens chromosome 5 clone CTD-2129A22, complete sequence Length = 200232 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tgagagcttgatgatggcca 373 |||||||||||||||||||| Sbjct: 115944 tgagagcttgatgatggcca 115925
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 112 ttcatgtccattggaggattcccttcattcgt 143 |||||| | ||||||||||||||||| ||||| Sbjct: 12614836 ttcatggcaattggaggattcccttctttcgt 12614805
>dbj|AB111368.1| Lepidosiren paradoxa mRNA for fructose-bisphosphate aldolase B, partial cds Length = 1023 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 catacccaatttcctcatgggcat 407 ||||||||||||||||| |||||| Sbjct: 668 catacccaatttcctcaggggcat 645
>dbj|AK104709.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-E10, full insert sequence Length = 1185 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 112 ttcatgtccattggaggattcccttcattcgt 143 |||||| | ||||||||||||||||| ||||| Sbjct: 307 ttcatggcaattggaggattcccttctttcgt 338
>emb|CR847870.16| Zebrafish DNA sequence from clone DKEY-170G11 in linkage group 22, complete sequence Length = 237985 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 accaaatacacatccatcct 68 |||||||||||||||||||| Sbjct: 217227 accaaatacacatccatcct 217246
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 138 attcgtggaagaaatgaaggtcttccag 165 |||| ||||||||| ||||||||||||| Sbjct: 1414260 attcttggaagaaaagaaggtcttccag 1414233
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 112 ttcatgtccattggaggattcccttcattcgt 143 |||||| | ||||||||||||||||| ||||| Sbjct: 12569110 ttcatggcaattggaggattcccttctttcgt 12569079
>emb|AL844499.5|CNS08CAW Oryza sativa chromosome 12, . BAC OSJNBb0092K12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129540 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 112 ttcatgtccattggaggattcccttcattcgt 143 |||||| | ||||||||||||||||| ||||| Sbjct: 60024 ttcatggcaattggaggattcccttctttcgt 59993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,165,532 Number of Sequences: 3902068 Number of extensions: 4165532 Number of successful extensions: 78375 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78206 Number of HSP's gapped (non-prelim): 166 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
