ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet114e06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 309 bits (156), Expect = 5e-81 Identities = 282/324 (87%) Strand = Plus / Plus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 98169 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 98228 Query: 217 ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 276 || ||||||||| || || ||||||| ||||| ||| || | |||||| || | | | Sbjct: 98229 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 98288 Query: 277 gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 336 |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| Sbjct: 98289 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 98348 Query: 337 acgctgccgtccgagctcggccacctcaccgacctcgccgtcctacacctcaactccaac 396 || || ||| |||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 98349 accctcccggaggagctcggcctcctcaccgacctcgccgtcttccacctcaactccaac 98408 Query: 397 cgcttcgccgggggcctcccggactccctccccaagctctccctcctccacgagctcgac 456 |||||| ||| |||||| |||||||||| ||| ||| || |||||||||| ||||| Sbjct: 98409 cgcttctgcggctccctccccgactccctccgcaacctccaccgcctccacgagatcgac 98468 Query: 457 gtcagcaacaacctcctctccggc 480 ||||||||||||| |||||||||| Sbjct: 98469 gtcagcaacaaccacctctccggc 98492
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 309 bits (156), Expect = 5e-81 Identities = 282/324 (87%) Strand = Plus / Minus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 32781372 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 32781313 Query: 217 ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 276 || ||||||||| || || ||||||| ||||| ||| || | |||||| || | | | Sbjct: 32781312 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 32781253 Query: 277 gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 336 |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| Sbjct: 32781252 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 32781193 Query: 337 acgctgccgtccgagctcggccacctcaccgacctcgccgtcctacacctcaactccaac 396 || || ||| |||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 32781192 accctcccggaggagctcggcctcctcaccgacctcgccgtcttccacctcaactccaac 32781133 Query: 397 cgcttcgccgggggcctcccggactccctccccaagctctccctcctccacgagctcgac 456 |||||| ||| |||||| |||||||||| ||| ||| || |||||||||| ||||| Sbjct: 32781132 cgcttctgcggctccctccccgactccctccgcaacctccaccgcctccacgagatcgac 32781073 Query: 457 gtcagcaacaacctcctctccggc 480 ||||||||||||| |||||||||| Sbjct: 32781072 gtcagcaacaaccacctctccggc 32781049 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 24290049 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 24289990 Query: 217 g 217 | Sbjct: 24289989 g 24289989 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 438 cctcctccacgagctcgacgtcagcaacaacctcctctccggcg 481 ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 24289768 cctcctcttcgagctcgacgtcagcaacaacctcctcgccggcg 24289725 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 24289905 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 24289846 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 24289845 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 24289804 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 acctcaactccaaccgcttc 402 |||||||||||||||||||| Sbjct: 30985134 acctcaactccaaccgcttc 30985153
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 309 bits (156), Expect = 5e-81 Identities = 282/324 (87%) Strand = Plus / Minus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 32871882 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 32871823 Query: 217 ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 276 || ||||||||| || || ||||||| ||||| ||| || | |||||| || | | | Sbjct: 32871822 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 32871763 Query: 277 gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 336 |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| Sbjct: 32871762 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 32871703 Query: 337 acgctgccgtccgagctcggccacctcaccgacctcgccgtcctacacctcaactccaac 396 || || ||| |||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 32871702 accctcccggaggagctcggcctcctcaccgacctcgccgtcttccacctcaactccaac 32871643 Query: 397 cgcttcgccgggggcctcccggactccctccccaagctctccctcctccacgagctcgac 456 |||||| ||| |||||| |||||||||| ||| ||| || |||||||||| ||||| Sbjct: 32871642 cgcttctgcggctccctccccgactccctccgcaacctccaccgcctccacgagatcgac 32871583 Query: 457 gtcagcaacaacctcctctccggc 480 ||||||||||||| |||||||||| Sbjct: 32871582 gtcagcaacaaccacctctccggc 32871559 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 24207518 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 24207459 Query: 217 g 217 | Sbjct: 24207458 g 24207458 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 438 cctcctccacgagctcgacgtcagcaacaacctcctctccggcg 481 ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 24207237 cctcctcttcgagctcgacgtcagcaacaacctcctcgccggcg 24207194 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 24207374 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 24207315 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 24207314 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 24207273 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 acctcaactccaaccgcttc 402 |||||||||||||||||||| Sbjct: 31075657 acctcaactccaaccgcttc 31075676
>dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A10, full insert sequence Length = 1408 Score = 309 bits (156), Expect = 5e-81 Identities = 282/324 (87%) Strand = Plus / Plus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 257 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 316 Query: 217 ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 276 || ||||||||| || || ||||||| ||||| ||| || | |||||| || | | | Sbjct: 317 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 376 Query: 277 gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 336 |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| Sbjct: 377 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 436 Query: 337 acgctgccgtccgagctcggccacctcaccgacctcgccgtcctacacctcaactccaac 396 || || ||| |||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 437 accctcccggaggagctcggcctcctcaccgacctcgccgtcttccacctcaactccaac 496 Query: 397 cgcttcgccgggggcctcccggactccctccccaagctctccctcctccacgagctcgac 456 |||||| ||| |||||| |||||||||| ||| ||| || |||||||||| ||||| Sbjct: 497 cgcttctgcggctccctccccgactccctccgcaacctccaccgcctccacgagatcgac 556 Query: 457 gtcagcaacaacctcctctccggc 480 ||||||||||||| |||||||||| Sbjct: 557 gtcagcaacaaccacctctccggc 580
>ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1301 Score = 281 bits (142), Expect = 1e-72 Identities = 310/366 (84%) Strand = Plus / Plus Query: 124 cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 183 |||||||| || |||| ||| |||||||||| ||||||||||||||||||||||| | Sbjct: 158 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 217 Query: 184 cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 243 || | |||||||||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 218 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 277 Query: 244 gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 303 ||||| ||| |||| |||||| | | | |||||||||||||| | | || ||| Sbjct: 278 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 337 Query: 304 ggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccacctc 363 ||| |||||||||||||||||||||| |||| ||| || || ||||||||||| |||| Sbjct: 338 ggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcggcctcctc 397 Query: 364 accgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggactcc 423 |||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 398 accgacctcgccgtgctccacctcaactccaaccgcttctccggcgcgctccccgacacc 457 Query: 424 ctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccggcggc 483 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 458 ctccccaagctctccctcctccacgagctcgacgtcagcaacaaccgcctcgccggcggc 517 Query: 484 ttcccg 489 |||||| Sbjct: 518 ttcccg 523 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gctcgacgtcagcaacaacc 469 |||||||||||||||||||| Sbjct: 841 gctcgacgtcagcaacaacc 860
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 281 bits (142), Expect = 1e-72 Identities = 310/366 (84%) Strand = Plus / Minus Query: 124 cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 183 |||||||| || |||| ||| |||||||||| ||||||||||||||||||||||| | Sbjct: 4062848 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 4062789 Query: 184 cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 243 || | |||||||||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 4062788 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 4062729 Query: 244 gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 303 ||||| ||| |||| |||||| | | | |||||||||||||| | | || ||| Sbjct: 4062728 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 4062669 Query: 304 ggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccacctc 363 ||| |||||||||||||||||||||| |||| ||| || || ||||||||||| |||| Sbjct: 4062668 ggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcggcctcctc 4062609 Query: 364 accgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggactcc 423 |||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 4062608 accgacctcgccgtgctccacctcaactccaaccgcttctccggcgcgctccccgacacc 4062549 Query: 424 ctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccggcggc 483 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 4062548 ctccccaagctctccctcctccacgagctcgacgtcagcaacaaccgcctcgccggcggc 4062489 Query: 484 ttcccg 489 |||||| Sbjct: 4062488 ttcccg 4062483 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gctcgacgtcagcaacaacc 469 |||||||||||||||||||| Sbjct: 4062165 gctcgacgtcagcaacaacc 4062146
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 281 bits (142), Expect = 1e-72 Identities = 310/366 (84%) Strand = Plus / Minus Query: 124 cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 183 |||||||| || |||| ||| |||||||||| ||||||||||||||||||||||| | Sbjct: 55706 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 55647 Query: 184 cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 243 || | |||||||||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 55646 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 55587 Query: 244 gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 303 ||||| ||| |||| |||||| | | | |||||||||||||| | | || ||| Sbjct: 55586 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 55527 Query: 304 ggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccacctc 363 ||| |||||||||||||||||||||| |||| ||| || || ||||||||||| |||| Sbjct: 55526 ggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcggcctcctc 55467 Query: 364 accgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggactcc 423 |||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 55466 accgacctcgccgtgctccacctcaactccaaccgcttctccggcgcgctccccgacacc 55407 Query: 424 ctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccggcggc 483 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 55406 ctccccaagctctccctcctccacgagctcgacgtcagcaacaaccgcctcgccggcggc 55347 Query: 484 ttcccg 489 |||||| Sbjct: 55346 ttcccg 55341 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gctcgacgtcagcaacaacc 469 |||||||||||||||||||| Sbjct: 55023 gctcgacgtcagcaacaacc 55004
>dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D11, full insert sequence Length = 1302 Score = 281 bits (142), Expect = 1e-72 Identities = 310/366 (84%) Strand = Plus / Plus Query: 124 cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 183 |||||||| || |||| ||| |||||||||| ||||||||||||||||||||||| | Sbjct: 158 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 217 Query: 184 cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 243 || | |||||||||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 218 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 277 Query: 244 gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 303 ||||| ||| |||| |||||| | | | |||||||||||||| | | || ||| Sbjct: 278 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 337 Query: 304 ggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccacctc 363 ||| |||||||||||||||||||||| |||| ||| || || ||||||||||| |||| Sbjct: 338 ggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcggcctcctc 397 Query: 364 accgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggactcc 423 |||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 398 accgacctcgccgtgctccacctcaactccaaccgcttctccggcgcgctccccgacacc 457 Query: 424 ctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccggcggc 483 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 458 ctccccaagctctccctcctccacgagctcgacgtcagcaacaaccgcctcgccggcggc 517 Query: 484 ttcccg 489 |||||| Sbjct: 518 ttcccg 523 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gctcgacgtcagcaacaacc 469 |||||||||||||||||||| Sbjct: 841 gctcgacgtcagcaacaacc 860
>ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2207 Score = 97.6 bits (49), Expect = 3e-17 Identities = 139/169 (82%) Strand = Plus / Plus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| ||||| |||||||||||| Sbjct: 397 gccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctg 456 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggac 420 ||| |||||||||| | || ||||||||||||||||||||| ||| | ||||||| | Sbjct: 457 ctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcccggcc 516 Query: 421 tccctccccaagctctccctcctccacgagctcgacgtcagcaacaacc 469 |||||| | ||| |||||| |||||||||||| |||||||||||| Sbjct: 517 accctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 565
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 97.6 bits (49), Expect = 3e-17 Identities = 139/169 (82%) Strand = Plus / Minus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| ||||| |||||||||||| Sbjct: 4180017 gccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctg 4179958 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggac 420 ||| |||||||||| | || ||||||||||||||||||||| ||| | ||||||| | Sbjct: 4179957 ctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcccggcc 4179898 Query: 421 tccctccccaagctctccctcctccacgagctcgacgtcagcaacaacc 469 |||||| | ||| |||||| |||||||||||| |||||||||||| Sbjct: 4179897 accctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 4179849 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 348 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgg 407 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| ||| Sbjct: 23281815 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcgg 23281874 Query: 408 gggcctcccggactccctccccaagctctccctcctccacgagctcgacgtcagcaacaa 467 | | | ||| | ||||| | |||| ||||||||||||||||||| |||||||||| Sbjct: 23281875 cgccgtgccgagcaccctcgagaggctccacctcctccacgagctcgacctcagcaacaa 23281934 Query: 468 cctcctc 474 || |||| Sbjct: 23281935 ccgcctc 23281941 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 365 ccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||||||||||||| || ||||||||||||||||||||| Sbjct: 14422062 ccgacctcgccgtgctccacctcaactccaaccgcttc 14422025 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 446 acgagctcgacgtcagcaacaacctcctc 474 |||||||||||||||||||||||| |||| Sbjct: 14421981 acgagctcgacgtcagcaacaaccgcctc 14421953 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 228 cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 272 ||||||||| |||||||||||| |||| || ||||||| ||||| Sbjct: 14422199 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 14422155 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gtggcgctgcaggcgctcaa 182 |||||||||||||||||||| Sbjct: 38127133 gtggcgctgcaggcgctcaa 38127114 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 ccacctcaccgacctcgccg 376 |||||||||||||||||||| Sbjct: 38011498 ccacctcaccgacctcgccg 38011479 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 463 aacaacctcctctccggcggcttcccgc 490 ||||||||||||||||||| | |||||| Sbjct: 23977511 aacaacctcctctccggcgccatcccgc 23977484 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 acctcctctccggcggcttcccgc 490 ||||||||||||||| |||||||| Sbjct: 18427631 acctcctctccggcgacttcccgc 18427654
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 97.6 bits (49), Expect = 3e-17 Identities = 139/169 (82%) Strand = Plus / Minus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| ||||| |||||||||||| Sbjct: 17984 gccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctg 17925 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggac 420 ||| |||||||||| | || ||||||||||||||||||||| ||| | ||||||| | Sbjct: 17924 ctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcccggcc 17865 Query: 421 tccctccccaagctctccctcctccacgagctcgacgtcagcaacaacc 469 |||||| | ||| |||||| |||||||||||| |||||||||||| Sbjct: 17864 accctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 17816
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 97.6 bits (49), Expect = 3e-17 Identities = 139/169 (82%) Strand = Plus / Minus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| ||||| |||||||||||| Sbjct: 126988 gccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctg 126929 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggac 420 ||| |||||||||| | || ||||||||||||||||||||| ||| | ||||||| | Sbjct: 126928 ctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcccggcc 126869 Query: 421 tccctccccaagctctccctcctccacgagctcgacgtcagcaacaacc 469 |||||| | ||| |||||| |||||||||||| |||||||||||| Sbjct: 126868 accctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 126820
>dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A11, full insert sequence Length = 2207 Score = 97.6 bits (49), Expect = 3e-17 Identities = 139/169 (82%) Strand = Plus / Plus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| ||||| |||||||||||| Sbjct: 397 gccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctg 456 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggac 420 ||| |||||||||| | || ||||||||||||||||||||| ||| | ||||||| | Sbjct: 457 ctcgccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctcccggcc 516 Query: 421 tccctccccaagctctccctcctccacgagctcgacgtcagcaacaacc 469 |||||| | ||| |||||| |||||||||||| |||||||||||| Sbjct: 517 accctccgccgcctccgcctcctacacgagctcgacctcagcaacaacc 565
>ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggac 420 |||||||||||||| | || ||||||||||||||||||||| ||| | |||||||| Sbjct: 361 ctcaccgacctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggac 420 Query: 421 tccctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccggc 480 |||||| | ||| || |||||||||||||||| |||||||||||| |||| |||| Sbjct: 421 gccctccgccgcctccgccgcctccacgagctcgacctcagcaacaaccgcctcgtcggc 480 Query: 481 ggcttccc 488 | |||||| Sbjct: 481 gccttccc 488 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 198 cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 257 ||||||||||||||| || | | ||||| |||||||| |||||||||||| ||| || Sbjct: 189 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 248 Query: 258 cttctgcgc 266 ||||||||| Sbjct: 249 cttctgcgc 257
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggac 420 |||||||||||||| | || ||||||||||||||||||||| ||| | |||||||| Sbjct: 125155 ctcaccgacctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggac 125096 Query: 421 tccctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccggc 480 |||||| | ||| || |||||||||||||||| |||||||||||| |||| |||| Sbjct: 125095 gccctccgccgcctccgccgcctccacgagctcgacctcagcaacaaccgcctcgtcggc 125036 Query: 481 ggcttccc 488 | |||||| Sbjct: 125035 gccttccc 125028 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Minus Query: 198 cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 257 ||||||||||||||| || | | ||||| |||||||| |||||||||||| ||| || Sbjct: 125327 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 125268 Query: 258 cttctgcgc 266 ||||||||| Sbjct: 125267 cttctgcgc 125259
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggac 420 |||||||||||||| | || ||||||||||||||||||||| ||| | |||||||| Sbjct: 4757150 ctcaccgacctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggac 4757091 Query: 421 tccctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccggc 480 |||||| | ||| || |||||||||||||||| |||||||||||| |||| |||| Sbjct: 4757090 gccctccgccgcctccgccgcctccacgagctcgacctcagcaacaaccgcctcgtcggc 4757031 Query: 481 ggcttccc 488 | |||||| Sbjct: 4757030 gccttccc 4757023 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 447 cgagctcgacgtcagcaacaacctcctctccggc 480 |||||||||| |||||||||||||| |||||||| Sbjct: 5390894 cgagctcgacctcagcaacaacctcttctccggc 5390927 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Minus Query: 198 cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 257 ||||||||||||||| || | | ||||| |||||||| |||||||||||| ||| || Sbjct: 4757322 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 4757263 Query: 258 cttctgcgc 266 ||||||||| Sbjct: 4757262 cttctgcgc 4757254 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 464 acaacctcctctccggcggcttcccg 489 |||||||||||||||||||| ||||| Sbjct: 4157009 acaacctcctctccggcggcatcccg 4157034
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggac 420 |||||||||||||| | || ||||||||||||||||||||| ||| | |||||||| Sbjct: 29558 ctcaccgacctcgcgctgctccacctcaactccaaccgcttctgcggcctcgtcccggac 29499 Query: 421 tccctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccggc 480 |||||| | ||| || |||||||||||||||| |||||||||||| |||| |||| Sbjct: 29498 gccctccgccgcctccgccgcctccacgagctcgacctcagcaacaaccgcctcgtcggc 29439 Query: 481 ggcttccc 488 | |||||| Sbjct: 29438 gccttccc 29431 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Minus Query: 198 cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 257 ||||||||||||||| || | | ||||| |||||||| |||||||||||| ||| || Sbjct: 29730 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 29671 Query: 258 cttctgcgc 266 ||||||||| Sbjct: 29670 cttctgcgc 29662
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 360 cctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccgga 419 |||| |||||||||| | || ||||||||||||||||||||| ||| | ||||| || Sbjct: 29238979 cctccccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctccccga 29239038 Query: 420 ctccctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccgg 479 | || || || | ||| |||||||||||||||||| |||||||||||| | || ||| Sbjct: 29239039 caccttctcccacctcaggctcctccacgagctcgacatcagcaacaaccgcttcgtcgg 29239098 Query: 480 cggcttcccg 489 |||||||||| Sbjct: 29239099 cggcttcccg 29239108 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 441 cctccacgagctcgacgtcagcaacaacctcctc 474 |||||||||||||||| ||||||||||| |||| Sbjct: 24244745 cctccacgagctcgaccacagcaacaaccgcctc 24244778 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 450 gctcgacgtcagcaacaacctcctctccggcggcttcccgc 490 |||||||||||| ||||| ||||||||||||| |||||| Sbjct: 28516380 gctcgacgtcagttacaacaacctctccggcggcatcccgc 28516340 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 450 gctcgacgtcagcaacaacctcctctccggcggcttcccgc 490 |||||||||||| ||||| ||||||||||||| |||||| Sbjct: 28492646 gctcgacgtcagttacaacaacctctccggcggcatcccgc 28492606
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 360 cctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccgga 419 |||| |||||||||| | || ||||||||||||||||||||| ||| | ||||| || Sbjct: 1777 cctccccgacctcgcgctgctccacctcaactccaaccgcttctgcggcgtgctccccga 1836 Query: 420 ctccctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccgg 479 | || || || | ||| |||||||||||||||||| |||||||||||| | || ||| Sbjct: 1837 caccttctcccacctcaggctcctccacgagctcgacatcagcaacaaccgcttcgtcgg 1896 Query: 480 cggcttcccg 489 |||||||||| Sbjct: 1897 cggcttcccg 1906
>ref|XM_468996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1447 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 252 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 311 Query: 217 g 217 | Sbjct: 312 g 312 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 438 cctcctccacgagctcgacgtcagcaacaacctcctctccggcg 481 ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 533 cctcctcttcgagctcgacgtcagcaacaacctcctcgccggcg 576 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 396 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 455 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 456 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 497
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 90575 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 90634 Query: 217 g 217 | Sbjct: 90635 g 90635 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 438 cctcctccacgagctcgacgtcagcaacaacctcctctccggcg 481 ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 90856 cctcctcttcgagctcgacgtcagcaacaacctcctcgccggcg 90899 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 90719 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 90778 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 90779 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 90820
>dbj|AK109350.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E06, full insert sequence Length = 1511 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 286 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 345 Query: 217 g 217 | Sbjct: 346 g 346 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 438 cctcctccacgagctcgacgtcagcaacaacctcctctccggcg 481 ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 567 cctcctcttcgagctcgacgtcagcaacaacctcctcgccggcg 610 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 430 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 489 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 490 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 531
>dbj|AK105732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H06, full insert sequence Length = 1642 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 286 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 345 Query: 217 g 217 | Sbjct: 346 g 346 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 438 cctcctccacgagctcgacgtcagcaacaacctcctctccggcg 481 ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 567 cctcctcttcgagctcgacgtcagcaacaacctcctcgccggcg 610 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 430 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 489 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 490 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 531
>dbj|AK068135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133O22, full insert sequence Length = 1451 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 157 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 216 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 282 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 341 Query: 217 g 217 | Sbjct: 342 g 342 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 438 cctcctccacgagctcgacgtcagcaacaacctcctctccggcg 481 ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 563 cctcctcttcgagctcgacgtcagcaacaacctcctcgccggcg 606 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 426 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 485 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 486 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 527
>gb|AY106034.1| Zea mays PCO099903 mRNA sequence Length = 687 Score = 65.9 bits (33), Expect = 1e-07 Identities = 98/117 (83%), Gaps = 2/117 (1%) Strand = Plus / Plus Query: 365 ccgacctcgccgtcctacacctcaactccaaccgc-ttcgccgggggcc-tcccggactc 422 |||||||||||||| | |||||||||||||||||| ||| |||| || |||| ||||| Sbjct: 22 ccgacctcgccgtcttccacctcaactccaaccgccttcagcgggctccctccccgactc 81 Query: 423 cctccccaagctctccctcctccacgagctcgacgtcagcaacaacctcctctccgg 479 |||| | ||| ||||||||||||| |||||||||||||||||| |||||||| Sbjct: 82 gctccgctccctccacctcctccacgagatcgacgtcagcaacaaccagctctccgg 138
>dbj|AK061561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D10, full insert sequence Length = 1122 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 438 cctcctccacgagctcgacgtcagcaacaacctcctctccggcg 481 ||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 200 cctcctcttcgagctcgacgtcagcaacaacctcctcgccggcg 243 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 63 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 122 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 123 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 164
>ref|NM_192605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1713 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 348 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgg 407 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| ||| Sbjct: 408 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcgg 467 Query: 408 gggcctcccggactccctccccaagctctccctcctccacgagctcgacgtcagcaacaa 467 | | | ||| | ||||| | |||| ||||||||||||||||||| |||||||||| Sbjct: 468 cgccgtgccgagcaccctcgagaggctccacctcctccacgagctcgacctcagcaacaa 527 Query: 468 cctcctc 474 || |||| Sbjct: 528 ccgcctc 534
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 348 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgg 407 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| ||| Sbjct: 7513 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcgg 7572 Query: 408 gggcctcccggactccctccccaagctctccctcctccacgagctcgacgtcagcaacaa 467 | | | ||| | ||||| | |||| ||||||||||||||||||| |||||||||| Sbjct: 7573 cgccgtgccgagcaccctcgagaggctccacctcctccacgagctcgacctcagcaacaa 7632 Query: 468 cctcctc 474 || |||| Sbjct: 7633 ccgcctc 7639
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 348 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgg 407 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| ||| Sbjct: 68557 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcgg 68616 Query: 408 gggcctcccggactccctccccaagctctccctcctccacgagctcgacgtcagcaacaa 467 | | | ||| | ||||| | |||| ||||||||||||||||||| |||||||||| Sbjct: 68617 cgccgtgccgagcaccctcgagaggctccacctcctccacgagctcgacctcagcaacaa 68676 Query: 468 cctcctc 474 || |||| Sbjct: 68677 ccgcctc 68683
>dbj|AK105670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A04, full insert sequence Length = 1985 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 348 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgg 407 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| ||| Sbjct: 467 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcgg 526 Query: 408 gggcctcccggactccctccccaagctctccctcctccacgagctcgacgtcagcaacaa 467 | | | ||| | ||||| | |||| ||||||||||||||||||| |||||||||| Sbjct: 527 cgccgtgccgagcaccctcgagaggctccacctcctccacgagctcgacctcagcaacaa 586 Query: 468 cctcctc 474 || |||| Sbjct: 587 ccgcctc 593
>dbj|AK105531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G10, full insert sequence Length = 1447 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 439 ctcctccacgagctcgacgtcagcaacaacctcctctccggcggcttcccg 489 |||||||||||||||||| |||||||||||| | || ||||||||||||| Sbjct: 29 ctcctccacgagctcgacatcagcaacaaccgcttcgtcggcggcttcccg 79
>dbj|AK105266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D06, full insert sequence Length = 2042 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 348 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttcgccgg 407 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| ||| Sbjct: 466 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttctgcgg 525 Query: 408 gggcctcccggactccctccccaagctctccctcctccacgagctcgacgtcagcaacaa 467 | | | ||| | ||||| | |||| ||||||||||||||||||| |||||||||| Sbjct: 526 cgccgtgccgagcaccctcgagaggctccacctcctccacgagctcgacctcagcaacaa 585 Query: 468 cctcctc 474 || |||| Sbjct: 586 ccgcctc 592
>gb|AY109350.1| Zea mays CL844_1 mRNA sequence Length = 4275 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 340 ctgccgtccgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgc 399 |||||| |||||||||||| ||||||||||||||| || | ||| ||||| |||||||| Sbjct: 427 ctgccgcccgagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgc 486 Query: 400 ttc 402 ||| Sbjct: 487 ttc 489
>gb|AF159297.2| Zea mays pollen extensin-like protein (Pex2) gene, complete cds Length = 3601 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 340 ctgccgtccgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgc 399 |||||| |||||||||||| ||||||||||||||| || | ||| ||||| |||||||| Sbjct: 836 ctgccgcccgagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgc 895 Query: 400 ttc 402 ||| Sbjct: 896 ttc 898
>ref|NM_193983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 365 ccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||||||||||||| || ||||||||||||||||||||| Sbjct: 413 ccgacctcgccgtgctccacctcaactccaaccgcttc 450 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 446 acgagctcgacgtcagcaacaacctcctc 474 |||||||||||||||||||||||| |||| Sbjct: 494 acgagctcgacgtcagcaacaaccgcctc 522 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 228 cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 272 ||||||||| |||||||||||| |||| || ||||||| ||||| Sbjct: 276 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 320
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 349 gagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 |||||||||| |||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 59719 gagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttc 59666
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 349 gagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 |||||||||| |||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 25452828 gagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttc 25452775 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 452 tcgacgtcagcaacaacctcctctccggcg 481 |||||| |||||||||||||||| |||||| Sbjct: 358875 tcgacgccagcaacaacctcctcaccggcg 358904
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 365 ccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||||||||||||| || ||||||||||||||||||||| Sbjct: 83459 ccgacctcgccgtgctccacctcaactccaaccgcttc 83422 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 446 acgagctcgacgtcagcaacaacctcctc 474 |||||||||||||||||||||||| |||| Sbjct: 83378 acgagctcgacgtcagcaacaaccgcctc 83350 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 228 cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 272 ||||||||| |||||||||||| |||| || ||||||| ||||| Sbjct: 83596 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 83552
>dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D10, full insert sequence Length = 1799 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 365 ccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||||||||||||| || ||||||||||||||||||||| Sbjct: 506 ccgacctcgccgtgctccacctcaactccaaccgcttc 543 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 446 acgagctcgacgtcagcaacaacctcctc 474 |||||||||||||||||||||||| |||| Sbjct: 587 acgagctcgacgtcagcaacaaccgcctc 615 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 228 cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 272 ||||||||| |||||||||||| |||| || ||||||| ||||| Sbjct: 369 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 413
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 349 gagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 |||||||||| |||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 25771498 gagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttc 25771445 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 452 tcgacgtcagcaacaacctcctctccggcg 481 |||||| |||||||||||||||| |||||| Sbjct: 358875 tcgacgccagcaacaacctcctcaccggcg 358904
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 445 cacgagctcgacgtcagcaacaacctcctctccggcggcttcccg 489 ||||||||||||||||||||||||| |||| |||||| |||||| Sbjct: 21747089 cacgagctcgacgtcagcaacaaccgcctcgtcggcgggttcccg 21747045 Score = 44.1 bits (22), Expect = 0.42 Identities = 82/102 (80%) Strand = Plus / Minus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 |||||||||||||||||| ||||||| | ||||| || || |||||||||||| | Sbjct: 21747233 gccggcgtcgacctcaacggcggcgacatcgccgggtacctccccgccgagctcggcctc 21747174 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 | ||||||||||| | | ||| ||||||||||||||||| Sbjct: 21747173 atgaccgacctcgcgctgttccacgtcaactccaaccgcttc 21747132
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 445 cacgagctcgacgtcagcaacaacctcctctccggcggcttcccg 489 ||||||||||||||||||||||||| |||| |||||| |||||| Sbjct: 21675434 cacgagctcgacgtcagcaacaaccgcctcgtcggcgggttcccg 21675390 Score = 44.1 bits (22), Expect = 0.42 Identities = 82/102 (80%) Strand = Plus / Minus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 |||||||||||||||||| ||||||| | ||||| || || |||||||||||| | Sbjct: 21675578 gccggcgtcgacctcaacggcggcgacatcgccgggtacctccccgccgagctcggcctc 21675519 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 | ||||||||||| | | ||| ||||||||||||||||| Sbjct: 21675518 atgaccgacctcgcgctgttccacgtcaactccaaccgcttc 21675477
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 445 cacgagctcgacgtcagcaacaacctcctctccggcggcttcccg 489 ||||||||||||||||||||||||| |||| |||||| |||||| Sbjct: 65462 cacgagctcgacgtcagcaacaaccgcctcgtcggcgggttcccg 65506 Score = 44.1 bits (22), Expect = 0.42 Identities = 82/102 (80%) Strand = Plus / Plus Query: 301 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgtccgagctcggccac 360 |||||||||||||||||| ||||||| | ||||| || || |||||||||||| | Sbjct: 65318 gccggcgtcgacctcaacggcggcgacatcgccgggtacctccccgccgagctcggcctc 65377 Query: 361 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 | ||||||||||| | | ||| ||||||||||||||||| Sbjct: 65378 atgaccgacctcgcgctgttccacgtcaactccaaccgcttc 65419
>gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family from Zea mays, complete sequence Length = 116115 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 438 cctcctccacgagctcgacgtcagcaacaacc 469 ||||||||||||||||||| |||||||||||| Sbjct: 2577 cctcctccacgagctcgacctcagcaacaacc 2608
>ref|XM_464070.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2085 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 365 ccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||||||||||| || | ||||||||||||||||||||| Sbjct: 395 ccgacctcgccctcatccacctcaactccaaccgcttc 432 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 442 ctccacgagctcgacgtcagcaacaacc 469 ||||||||||||||| |||||||||||| Sbjct: 472 ctccacgagctcgacctcagcaacaacc 499
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 447 cgagctcgacgtcagcaacaacctcctctccggc 480 |||||||||| |||||||||||||| |||||||| Sbjct: 77568 cgagctcgacctcagcaacaacctcttctccggc 77601
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 447 cgagctcgacgtcagcaacaacctcctctccggc 480 |||||||||| |||||||||||||| |||||||| Sbjct: 76408 cgagctcgacctcagcaacaacctcttctccggc 76441
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 365 ccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||||||||||| || | ||||||||||||||||||||| Sbjct: 2022911 ccgacctcgccctcatccacctcaactccaaccgcttc 2022874 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 442 ctccacgagctcgacgtcagcaacaacc 469 ||||||||||||||| |||||||||||| Sbjct: 2022834 ctccacgagctcgacctcagcaacaacc 2022807
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 365 ccgacctcgccgtcctacacctcaactccaaccgcttc 402 ||||||||||| || | ||||||||||||||||||||| Sbjct: 73119 ccgacctcgccctcatccacctcaactccaaccgcttc 73082 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 442 ctccacgagctcgacgtcagcaacaacc 469 ||||||||||||||| |||||||||||| Sbjct: 73042 ctccacgagctcgacctcagcaacaacc 73015
>emb|Z34465.1|ZMEXTENS Z.mays (B73) gene for extensin-like protein Length = 4431 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 349 gagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 |||||||||| ||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 899 gagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttc 952 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 445 cacgagctcgacgtcagcaacaacc 469 |||||| |||||||||||||||||| Sbjct: 995 cacgagttcgacgtcagcaacaacc 1019
>gb|AY109630.1| Zea mays CL844_2 mRNA sequence Length = 3567 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 349 gagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 402 |||||||||| ||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 436 gagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttc 489 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 445 cacgagctcgacgtcagcaacaacc 469 |||||| |||||||||||||||||| Sbjct: 532 cacgagttcgacgtcagcaacaacc 556
>ref|XM_476056.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3354 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 464 acaacctcctctccggcggcttcccg 489 |||||||||||||||||||| ||||| Sbjct: 2888 acaacctcctctccggcggcatcccg 2913
>gb|DQ013804.1| Phyllostachys praecox RLK1 mRNA, partial cds Length = 2776 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 464 acaacctcctctccggcggcttcccg 489 |||||||||| ||||||||||||||| Sbjct: 656 acaacctcctgtccggcggcttcccg 681
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 464 acaacctcctctccggcggcttcccg 489 |||||||||||||||||||| ||||| Sbjct: 43488 acaacctcctctccggcggcatcccg 43513
>ref|NM_011641.1| Mus musculus transformation related protein 63 (Trp63), mRNA Length = 4669 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 1396 ccctacccaagctctccctcctccac 1421
>gb|AC109213.6| Mus musculus chromosome 16, clone RP23-345L20, complete sequence Length = 244558 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 73497 ccctacccaagctctccctcctccac 73522
>gb|AF533892.1| Mus musculus p63 (Trp63) gene, alternatively spliced, complete cds Length = 208158 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 200949 ccctacccaagctctccctcctccac 200974
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 464 acaacctcctctccggcggcttcccg 489 |||||||||||||||||||| ||||| Sbjct: 131703 acaacctcctctccggcggcatcccg 131728
>dbj|AK137253.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530071H14 product:transformation related protein 63, full insert sequence Length = 4656 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 1411 ccctacccaagctctccctcctccac 1436
>dbj|AK047884.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130020A13 product:unclassifiable, full insert sequence Length = 1623 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 793 ccctacccaagctctccctcctccac 818
>dbj|AP004781.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0691E09 Length = 149859 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 441 cctccacgagctcgacgtcagcaacaacctcctc 474 |||||||||||||||| ||||||||||| |||| Sbjct: 74834 cctccacgagctcgaccacagcaacaaccgcctc 74867
>gb|BC090649.1| Mus musculus transformation related protein 63, mRNA (cDNA clone MGC:115972 IMAGE:30645427), complete cds Length = 4689 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 1392 ccctacccaagctctccctcctccac 1417
>dbj|AK109643.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-G09, full insert sequence Length = 1938 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 452 tcgacgtcagcaacaacctcctctccggcg 481 |||||| |||||||||||||||| |||||| Sbjct: 562 tcgacgccagcaacaacctcctcaccggcg 591
>dbj|AK073061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021A01, full insert sequence Length = 2391 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 452 tcgacgtcagcaacaacctcctctccggcg 481 |||||| |||||||||||||||| |||||| Sbjct: 243 tcgacgccagcaacaacctcctcaccggcg 272
>gb|AF075439.1|AF075439 Mus musculus DN p63 alpha mRNA, complete cds Length = 1761 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 1278 ccctacccaagctctccctcctccac 1303
>gb|AF075438.1|AF075438 Mus musculus DN p63 beta mRNA, complete cds Length = 1386 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 1278 ccctacccaagctctccctcctccac 1303
>gb|AF075436.1|AF075436 Mus musculus TA*p63 alpha mRNA, complete cds Length = 2043 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 1560 ccctacccaagctctccctcctccac 1585
>gb|AF075435.1|AF075435 Mus musculus TA*p63 beta mRNA, complete cds Length = 1668 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 1560 ccctacccaagctctccctcctccac 1585
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 452 tcgacgtcagcaacaacctcctctccggcg 481 |||||| |||||||||||||||| |||||| Sbjct: 66193 tcgacgccagcaacaacctcctcaccggcg 66222
>dbj|AB010152.1| Mus musculus mRNA for p73H, complete cds Length = 4669 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 422 ccctccccaagctctccctcctccac 447 |||| ||||||||||||||||||||| Sbjct: 1396 ccctacccaagctctccctcctccac 1421
>ref|XM_474348.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ctcgacgtcagcaacaacctcctctccgg 479 |||||| | |||||||||||||||||||| Sbjct: 691 ctcgacctgagcaacaacctcctctccgg 719
>gb|BC017188.2| Homo sapiens KIAA0683 gene product, mRNA (cDNA clone MGC:1356 IMAGE:3139743), complete cds Length = 3115 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cggagcagacggccgacaacagccc 143 ||||| ||||||||||||||||||| Sbjct: 2376 cggaggagacggccgacaacagccc 2352
>ref|XM_743953.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g04640) partial mRNA Length = 1605 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 gtggcgctgcaggcgctcaag 183 ||||||||||||||||||||| Sbjct: 999 gtggcgctgcaggcgctcaag 979
>gb|BC028332.1| Homo sapiens KIAA0683 gene product, mRNA (cDNA clone IMAGE:4509972) Length = 916 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cggagcagacggccgacaacagccc 143 ||||| ||||||||||||||||||| Sbjct: 145 cggaggagacggccgacaacagccc 121
>emb|AL031705.25|HS305C8 Human DNA sequence from clone LA16c-305C8 on chromosome 16 Contains an RPS3A (40S ribosomal protein S3A) pseudogene, part of the gene for a novel protein similar to NPTX1 (neuronal pentraxin I), the gene DFKZP434A073 or KIAA0683 and the last exon of gene KIAA0590. Contains ESTs, STSs, GSSs and eight putative CpG islands, complete sequence Length = 42569 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cggagcagacggccgacaacagccc 143 ||||| ||||||||||||||||||| Sbjct: 35643 cggaggagacggccgacaacagccc 35619
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ctcgacgtcagcaacaacctcctctccgg 479 |||||| | |||||||||||||||||||| Sbjct: 85490 ctcgacctgagcaacaacctcctctccgg 85518
>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 Length = 279011 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cggagcagacggccgacaacagccc 143 ||||| ||||||||||||||||||| Sbjct: 177906 cggaggagacggccgacaacagccc 177882
>emb|AL137394.1|HSM802087 Homo sapiens mRNA; cDNA DKFZp434I062 (from clone DKFZp434I062) Length = 3272 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cggagcagacggccgacaacagccc 143 ||||| ||||||||||||||||||| Sbjct: 2551 cggaggagacggccgacaacagccc 2527
>emb|AL080126.1|HSM800636 Homo sapiens mRNA; cDNA DKFZp434A073 (from clone DKFZp434A073) Length = 3320 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cggagcagacggccgacaacagccc 143 ||||| ||||||||||||||||||| Sbjct: 2551 cggaggagacggccgacaacagccc 2527
>ref|NM_016111.1| Homo sapiens KIAA0683 gene product (KIAA0683), mRNA Length = 3320 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cggagcagacggccgacaacagccc 143 ||||| ||||||||||||||||||| Sbjct: 2551 cggaggagacggccgacaacagccc 2527
>emb|CR599116.1| full-length cDNA clone CS0DL002YF18 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 3148 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cggagcagacggccgacaacagccc 143 ||||| ||||||||||||||||||| Sbjct: 2481 cggaggagacggccgacaacagccc 2457
>dbj|AK001786.1| Homo sapiens cDNA FLJ10924 fis, clone OVARC1000443, highly similar to Homo sapiens mRNA; cDNA DKFZp434A073 Length = 1757 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cggagcagacggccgacaacagccc 143 ||||| ||||||||||||||||||| Sbjct: 1056 cggaggagacggccgacaacagccc 1032
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ctcgacgtcagcaacaacctcctctccgg 479 |||||| | |||||||||||||||||||| Sbjct: 34631368 ctcgacctgagcaacaacctcctctccgg 34631396
>dbj|AB014583.3| Homo sapiens mRNA for KIAA0683 protein, partial cds Length = 3309 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 cggagcagacggccgacaacagccc 143 ||||| ||||||||||||||||||| Sbjct: 2608 cggaggagacggccgacaacagccc 2584
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 353 tcggccacctcaccgacctcgccgt 377 ||||||| ||||||||||||||||| Sbjct: 2288394 tcggccagctcaccgacctcgccgt 2288370
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 450 gctcgacgtcagcaacaacctcctctccggcggcttcccgc 490 |||||||||||| ||||| ||||||||||||| |||||| Sbjct: 123413 gctcgacgtcagttacaacaacctctccggcggcatcccgc 123373 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 450 gctcgacgtcagcaacaacctcctctccggcggcttcccgc 490 |||||||||||| ||||| ||||||||||||| |||||| Sbjct: 99679 gctcgacgtcagttacaacaacctctccggcggcatcccgc 99639
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 450 gctcgacgtcagcaacaacctcctctccggcggcttcccgc 490 |||||||||||| ||||| ||||||||||||| |||||| Sbjct: 7858 gctcgacgtcagttacaacaacctctccggcggcatcccgc 7818
>ref|XM_320018.2| Anopheles gambiae str. PEST ENSANGP00000010492 (ENSANGG00000008003), partial mRNA Length = 1308 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 cgtggcgctgcaggcgctcaa 182 ||||||||||||||||||||| Sbjct: 277 cgtggcgctgcaggcgctcaa 257
>dbj|AK110462.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F12, full insert sequence Length = 3503 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 450 gctcgacgtcagcaacaacctcctctccggcggcttcccgc 490 |||||||||||| ||||| ||||||||||||| |||||| Sbjct: 1911 gctcgacgtcagttacaacaacctctccggcggcatcccgc 1951
>dbj|AK107505.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E05, full insert sequence Length = 1644 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ctcgacgtcagcaacaacctcctctccgg 479 |||||| | |||||||||||||||||||| Sbjct: 400 ctcgacctgagcaacaacctcctctccgg 428
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 451 ctcgacgtcagcaacaacctcctctccgg 479 |||||| | |||||||||||||||||||| Sbjct: 37097 ctcgacctgagcaacaacctcctctccgg 37125
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 cacctcaccgacctcgccgtc 378 ||||||||||||||||||||| Sbjct: 197795 cacctcaccgacctcgccgtc 197815
>gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940126D9, complete sequence Length = 125236 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 168 gctgcaggcgctcaagcgcgccatcaccgacga 200 |||||||| |||||| | ||||||||||||||| Sbjct: 3540 gctgcaggagctcaacctcgccatcaccgacga 3508
>ref|NM_190140.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gtggcgctgcaggcgctcaa 182 |||||||||||||||||||| Sbjct: 1477 gtggcgctgcaggcgctcaa 1496
>ref|NM_190119.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2322 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 ccacctcaccgacctcgccg 376 |||||||||||||||||||| Sbjct: 48 ccacctcaccgacctcgccg 29
>ref|NM_192712.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1443 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 463 aacaacctcctctccggcggcttcccgc 490 ||||||||||||||||||| | |||||| Sbjct: 388 aacaacctcctctccggcgccatcccgc 415
>ref|XM_370239.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06736.4) partial mRNA Length = 3798 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cggcgtcgacctcaaccacg 322 |||||||||||||||||||| Sbjct: 444 cggcgtcgacctcaaccacg 463
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 cgtgctgccccgtgccgctgccgg 121 |||||||||| ||||||||||||| Sbjct: 3128862 cgtgctgcccagtgccgctgccgg 3128885
>emb|Z21818.1|HSCRCANTA H.sapiens carcinoembryonic antigen gene Length = 11288 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ggactccctccccaagctct 436 |||||||||||||||||||| Sbjct: 4249 ggactccctccccaagctct 4268
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 acctcaactccaaccgcttc 402 |||||||||||||||||||| Sbjct: 110930 acctcaactccaaccgcttc 110911
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 ccacggcgacctggccggca 337 |||||||||||||||||||| Sbjct: 180402 ccacggcgacctggccggca 180383
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 accacggcgacctggccggc 336 |||||||||||||||||||| Sbjct: 32580 accacggcgacctggccggc 32599
>gb|AC010182.16| Homo sapiens 12 BAC RP11-185N2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165139 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 gactccctccccaagctctc 437 |||||||||||||||||||| Sbjct: 119011 gactccctccccaagctctc 119030
>gb|AC008761.8| Homo sapiens chromosome 19 clone CTD-3149D2, complete sequence Length = 226170 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cctacacctcaactccaacc 397 |||||||||||||||||||| Sbjct: 40263 cctacacctcaactccaacc 40282
>gb|AC098796.2| Homo sapiens chromosome 19 clone LLNLF-92D5, complete sequence Length = 5513 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ggactccctccccaagctct 436 |||||||||||||||||||| Sbjct: 1675 ggactccctccccaagctct 1694
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 acaacctcctctccggcggc 483 |||||||||||||||||||| Sbjct: 3911602 acaacctcctctccggcggc 3911621
>dbj|AK035779.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630004A14 product:hypothetical protein, full insert sequence Length = 2037 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ccaagctctccctcctccac 447 |||||||||||||||||||| Sbjct: 47 ccaagctctccctcctccac 28
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 299 tggccggcgtcgacctcaaccacggcgacctg 330 ||||||| |||||||||||| |||||||||| Sbjct: 1509286 tggccggaatcgacctcaaccgcggcgacctg 1509255 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ggccggcacgctgccgtccg 349 |||||||||||||||||||| Sbjct: 1477002 ggccggcacgctgccgtccg 1477021
>gb|BC021842.1| Mus musculus sushi domain containing 4, mRNA (cDNA clone MGC:30368 IMAGE:5135798), complete cds Length = 2068 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ccaagctctccctcctccac 447 |||||||||||||||||||| Sbjct: 57 ccaagctctccctcctccac 38
>ref|NM_144796.2| Mus musculus sushi domain containing 4 (Susd4), mRNA Length = 2037 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ccaagctctccctcctccac 447 |||||||||||||||||||| Sbjct: 47 ccaagctctccctcctccac 28
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 ccacctcaccgacctcgccg 376 |||||||||||||||||||| Sbjct: 92442 ccacctcaccgacctcgccg 92423
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gtggcgctgcaggcgctcaa 182 |||||||||||||||||||| Sbjct: 95167 gtggcgctgcaggcgctcaa 95148
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gtggcgctgcaggcgctcaa 182 |||||||||||||||||||| Sbjct: 46367 gtggcgctgcaggcgctcaa 46348
>dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1003B09 Length = 155263 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 acctcctctccggcggcttcccgc 490 ||||||||||||||| |||||||| Sbjct: 51389 acctcctctccggcgacttcccgc 51412
>dbj|AP003563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1168H06 Length = 185600 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 acctcctctccggcggcttcccgc 490 ||||||||||||||| |||||||| Sbjct: 26848 acctcctctccggcgacttcccgc 26871
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 463 aacaacctcctctccggcggcttcccgc 490 ||||||||||||||||||| | |||||| Sbjct: 123915 aacaacctcctctccggcgccatcccgc 123888
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 463 aacaacctcctctccggcggcttcccgc 490 ||||||||||||||||||| | |||||| Sbjct: 92033 aacaacctcctctccggcgccatcccgc 92006
>dbj|AK121636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051N12, full insert sequence Length = 1756 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gtggcgctgcaggcgctcaa 182 |||||||||||||||||||| Sbjct: 1356 gtggcgctgcaggcgctcaa 1375
>dbj|AK119529.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C05, full insert sequence Length = 1598 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gtggcgctgcaggcgctcaa 182 |||||||||||||||||||| Sbjct: 1295 gtggcgctgcaggcgctcaa 1314
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 acctcaccgacctcgccgtc 378 |||||||||||||||||||| Sbjct: 2879333 acctcaccgacctcgccgtc 2879352
>dbj|AK065286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M14, full insert sequence Length = 1618 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gtggcgctgcaggcgctcaa 182 |||||||||||||||||||| Sbjct: 1356 gtggcgctgcaggcgctcaa 1375
>gb|AY109232.1| Zea mays PCO115240 mRNA sequence Length = 1756 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 gtggcgctgcaggcgctcaa 182 |||||||||||||||||||| Sbjct: 1328 gtggcgctgcaggcgctcaa 1347
>gb|AC130720.3| Mus musculus BAC clone RP24-292B4 from chromosome 1, complete sequence Length = 176143 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 ccaagctctccctcctccac 447 |||||||||||||||||||| Sbjct: 174986 ccaagctctccctcctccac 175005
>emb|Y18523.4|ASY18523 Actinoplanes sp. SE50/110 complete acarbose (acb) gene cluster, strain SE50/110 Length = 41323 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cggccacctcaccgacctcg 373 |||||||||||||||||||| Sbjct: 40051 cggccacctcaccgacctcg 40070
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 accacggcgacctggccggc 336 |||||||||||||||||||| Sbjct: 2644850 accacggcgacctggccggc 2644869
>gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complete sequence Length = 204175 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ccaagctctccctcctccac 447 |||||||||||||||||||| Sbjct: 160845 ccaagctctccctcctccac 160826
>emb|Y10816.1|LIY10816 L.infantum psa gene Length = 1943 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccggcacgctgccgtccgag 351 |||||||||||||||||||| Sbjct: 1133 ccggcacgctgccgtccgag 1152 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,422,275 Number of Sequences: 3902068 Number of extensions: 2422275 Number of successful extensions: 56002 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54101 Number of HSP's gapped (non-prelim): 1889 length of query: 490 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 468 effective length of database: 17,147,199,772 effective search space: 8024889493296 effective search space used: 8024889493296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
