ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet114e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLAP_HUMAN (Q9Y263) Phospholipase A-2-activating protein (PLAP) ... 33 0.38
2MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich pro... 30 1.9
36PGD_SYNP7 (P21577) 6-phosphogluconate dehydrogenase, decarboxyl... 30 3.2
4GON4L_MOUSE (Q9DB00) GON-4-like protein (GON-4 homolog) 30 3.2
5LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-bind... 29 4.2
6RHLB_IDILO (Q5QYF8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-) 28 7.2
7NQO2_PARDE (P29914) NADH-quinone oxidoreductase chain 2 (EC 1.6.... 28 7.2
8METH_CAEEL (Q09582) Probable methionine synthase (EC 2.1.1.13) (... 28 7.2
9ICEN_PANAN (Q47879) Ice nucleation protein inaU 28 7.2
10KAPR_EMENI (O59922) cAMP-dependent protein kinase regulatory sub... 28 7.2
11HCP_METTH (O27502) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-... 28 7.2
12ICEA_PANAN (P20469) Ice nucleation protein inaA 28 7.2
13ICEN_ENTAG (P16239) Ice nucleation protein 28 7.2
146PGD_SYNY3 (P52208) 6-phosphogluconate dehydrogenase, decarboxyl... 28 7.2
15BUCC_APLCA (P20481) Buccalin precursor [Contains: Buccalin D; Bu... 28 9.4
16AMOT_HUMAN (Q4VCS5) Angiomotin 28 9.4
17GID2_ORYSA (Q7XAK4) F-box protein GID2 (Gibberellin-insensitive ... 28 9.4

>PLAP_HUMAN (Q9Y263) Phospholipase A-2-activating protein (PLAP) (PLA2P)|
          Length = 738

 Score = 32.7 bits (73), Expect = 0.38
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = +2

Query: 149 KLSPLSPVRPDDKRRAPAASVLLKVQDSSAAEAYEQYLRLPELSRLWKGACCPGWTDEGL 328
           KL  L+   P++K+      +LL+   S    +  +   + +L  LWK   CP    E +
Sbjct: 497 KLKELNGTAPEEKKLTEDDLILLEKILSLICNSSSEKPTVQQLQILWKAINCP----EDI 552

Query: 329 VKPALQALEITFRFVSV 379
           V PAL  L ++ +  SV
Sbjct: 553 VFPALDILRLSIKHPSV 569



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>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)|
           (Protein kinase A interference protein)
          Length = 376

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
 Frame = -1

Query: 384 SATDTKRKVISSACSAGLTRPSSVQPGQHAPFHSLDSS-GSRRYCSYASAAELSCTFSNT 208
           SA  T R  +S   S+     SS+     A   SL SS  SR   S+ S++    + S T
Sbjct: 37  SAVSTARSSVSRVSSSSSILSSSMVSSSSADSSSLTSSTSSRSLVSHTSSSTSIASISFT 96

Query: 207 DAAGARRLSSGRTGESGDNLVVAISFSTVPAQQTLGLTNLSFETSTAPCS 58
             + +   S+  +  +  +   + SFS      T   +  S +TST+  S
Sbjct: 97  SFSFSSDSSTSSSSSASSDSSSSSSFSISSTSATSESSTSSTQTSTSSSS 146



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>6PGD_SYNP7 (P21577) 6-phosphogluconate dehydrogenase, decarboxylating (EC|
           1.1.1.44)
          Length = 471

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 230 SSAAEAYEQYLRLPELSRLWKGAC 301
           + A++ Y   L L EL+R+WKG C
Sbjct: 345 AKASQVYNYGLNLGELARIWKGGC 368



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>GON4L_MOUSE (Q9DB00) GON-4-like protein (GON-4 homolog)|
          Length = 2260

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 159  GDNLVVAISFSTVPAQQTLGLTNLSFETSTAPCS 58
            G N++  +S +  P+ QT+ +T L    +T PCS
Sbjct: 1170 GCNMIQPVSAAVAPSPQTIPITTLLVNPTTFPCS 1203



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>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1821

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 143 TTKLSPLSPVRPDDKRRA-PAASVLLKVQDSSAAEAYEQYLRLPELSRLWKGACCPGWT 316
           T + +PL   +P  + RA PA   L   Q S AA       RL   + +  G CCPGWT
Sbjct: 121 TRRSTPLGQQQPAPRTRAAPALPRLGTPQRSGAAPPTPPRGRLTGRN-VCGGQCCPGWT 178



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>RHLB_IDILO (Q5QYF8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 425

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -1

Query: 300 HAPFHSLDSSGSRRYCSYASAAELSCTFSNTDAAGARRLSSGRT 169
           H       SS    YC+   A  L    SN D AG  +  +G+T
Sbjct: 17  HPKIQQAISSAGFEYCTPIQALSLPVALSNRDVAGQAQTGTGKT 60



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>NQO2_PARDE (P29914) NADH-quinone oxidoreductase chain 2 (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain 2) (NDH-1, chain 2)
          Length = 239

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
 Frame = +2

Query: 152 LSPLSPVRPDDKRRAPAASVLLKVQDSSAAEAYEQYLRLPELSRLWKGACCPGWTDEGLV 331
           L  LSP++PD     PA     + Q +   E  +Q   +P    LW+     GW     +
Sbjct: 2   LRRLSPIQPDSFEFTPANLEWARAQMTKYPEGRQQSAIIPV---LWRAQEQEGWLSRPAI 58

Query: 332 K--------PALQALEI-TFRFV 373
           +        P ++ALE+ TF F+
Sbjct: 59  EYCADLLGMPYIRALEVATFYFM 81



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>METH_CAEEL (Q09582) Probable methionine synthase (EC 2.1.1.13)|
            (5-methyltetrahydrofolate--homocysteine
            methyltransferase) (Methionine synthase, vitamin-B12
            dependent) (MS)
          Length = 1249

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
 Frame = +2

Query: 41   QPSFCLEQGAVEVSN---ERLVNPRVC*AGTVLKEMATTKLSPLSPVRPDDKRRAPAASV 211
            QP FCL      + N   +  +    C AG   +E   T           +K     AS+
Sbjct: 1060 QPHFCLSDFIKPLKNGVPDDYLGLFACTAGLGAEEYCKTL----------EKNHDDYASI 1109

Query: 212  LLKVQDSSAAEAYEQYLRLPELSRLWKGACCPGWTDEGLVKPALQAL 352
            ++K      AEAY +YL     + LW  +     T+  L+    Q +
Sbjct: 1110 MVKALADRLAEAYAEYLHKEVRTTLWGYSTNEDLTESDLLSIKYQGI 1156



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>ICEN_PANAN (Q47879) Ice nucleation protein inaU|
          Length = 1034

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
 Frame = -1

Query: 303 QHAPFHSLDSSGSRRYCSYASAAELSCTFSNTDAAGARR---LSSGRTGESGDNLVVAIS 133
           Q A +HS+ ++G     +    ++L+  + +T  AGA        G T  +G N ++   
Sbjct: 616 QTAGYHSILTAGYGSTQTAQERSDLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAG 675

Query: 132 F-STVPAQQTLGLTNLSFETSTA 67
           + ST  AQ+   LT     TSTA
Sbjct: 676 YGSTQTAQENSDLTTGYGSTSTA 698



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>KAPR_EMENI (O59922) cAMP-dependent protein kinase regulatory subunit (PKA|
           regulatory subunit)
          Length = 412

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -1

Query: 318 SVQPGQHAPFHSLDSSGSRRYCSYASAAELSCTFSNTDAAGARRLSSGRTGESGDNL 148
           S +  + + FH +         S   A   +   ++  A G   L SGR GESGD +
Sbjct: 16  STKEDKPSSFHKIAEDEEYEVTSPTDATFRASKNADNSAGGNNPLESGRAGESGDGI 72



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>HCP_METTH (O27502) Hydroxylamine reductase (EC 1.7.-.-) (Hybrid-cluster|
           protein) (HCP)
          Length = 427

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 31/120 (25%), Positives = 51/120 (42%)
 Frame = +2

Query: 2   PDPRVTRTRAGSKQPSFCLEQGAVEVSNERLVNPRVC*AGTVLKEMATTKLSPLSPVRPD 181
           P+  V  T A  K     ++ G +E    RL++   C    V  E+    +  LS +   
Sbjct: 301 PEDTVVLTLACGKYRFNSMDLGDIE-GVPRLIDLGQCNDAIVAVEL----VEALSNLFQM 355

Query: 182 DKRRAPAASVLLKVQDSSAAEAYEQYLRLPELSRLWKGACCPGWTDEGLVKPALQALEIT 361
           D    P  S++L   +  AA      L L +L  ++ G   PGW +E +VK  +   ++T
Sbjct: 356 DINELPL-SIILSWMEQKAAAILWSLLSL-DLKGMYIGPILPGWANEDIVKFLVDNYDLT 413



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>ICEA_PANAN (P20469) Ice nucleation protein inaA|
          Length = 1322

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
 Frame = -1

Query: 303  QHAPFHSLDSSGSRRYCSYASAAELSCTFSNTDAAGARR---LSSGRTGESGDNLVVAIS 133
            Q A +HS+ ++G     +    ++L+  + +T  AGA        G T  +G N ++   
Sbjct: 808  QTAGYHSILTAGYGSTQTAQERSDLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAG 867

Query: 132  F-STVPAQQTLGLTNLSFETSTA 67
            + ST  AQ+   LT     TSTA
Sbjct: 868  YGSTQTAQENSDLTTGYGSTSTA 890



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>ICEN_ENTAG (P16239) Ice nucleation protein|
          Length = 1258

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
 Frame = -1

Query: 303  QHAPFHSLDSSGSRRYCSYASAAELSCTFSNTDAAGARR---LSSGRTGESGDNLVVAIS 133
            Q A +HS+ ++G     +    ++L+  + +T  AGA        G T  +G N ++   
Sbjct: 792  QTAGYHSILTAGYGSTQTAQERSDLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAG 851

Query: 132  F-STVPAQQTLGLTNLSFETSTA 67
            + ST  AQ+   LT     TSTA
Sbjct: 852  YGSTQTAQENSDLTTGYGSTSTA 874



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>6PGD_SYNY3 (P52208) 6-phosphogluconate dehydrogenase, decarboxylating (EC|
           1.1.1.44)
          Length = 482

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 230 SSAAEAYEQYLRLPELSRLWKGAC 301
           + A++ +   + LPE++R+WKG C
Sbjct: 353 AKASQEFGYDVNLPEIARIWKGGC 376



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>BUCC_APLCA (P20481) Buccalin precursor [Contains: Buccalin D; Buccalin E;|
           Buccalin F; Buccalin G; Buccalin H; Buccalin A1;
           Buccalin A2; Buccalin A3; Buccalin A4; Buccalin A5;
           Buccalin A6; Buccalin I; Buccalin J1; Buccalin K;
           Buccalin L1; Buccalin J2; Buc
          Length = 505

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 391 VGERDGHEAEGDLKRLQRGLD 329
           +G+RD  EA GDL+  +RGLD
Sbjct: 335 LGKRDSGEASGDLEEGKRGLD 355



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>AMOT_HUMAN (Q4VCS5) Angiomotin|
          Length = 1084

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +2

Query: 56  LEQGAVEVSNERLVNPRVC*AGTVLKEMATTKLSPLSPVRPDDKRRAPAAS 208
           L+QG V   +ERL+   +  +G       T+  +PLSP +P+D  + P +S
Sbjct: 166 LKQGHVRSLSERLMQMSLATSGVKAHPPVTS--APLSPPQPNDLYKNPTSS 214



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>GID2_ORYSA (Q7XAK4) F-box protein GID2 (Gibberellin-insensitive dwarf protein|
           2) (Protein GIBBERELLIN INSENSITIVE DWARF2)
          Length = 212

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
 Frame = +2

Query: 188 RRAPAASVLLKVQDSSAAEAYEQYLRLPELSRLWKGACCPGWTDEGLVKPALQALEIT-- 361
           RRA A ++      ++AA     + +L E  RLW+ AC   W + G  +  L+A+ ++  
Sbjct: 86  RRAEARTL------AAAACVSRGWRQLAEDERLWEAACVREWANLGFSERQLRAVVLSLG 139

Query: 362 -FRFVSVALSDP---RGYASRRELARR 430
            FR +      P   RG    R+  RR
Sbjct: 140 GFRRLHAVYIRPLQWRGAGVPRQQGRR 166


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,137,838
Number of Sequences: 219361
Number of extensions: 664898
Number of successful extensions: 2503
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2503
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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