ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet114d09 |
|---|---|
| Clone Library Name | barley_pub |
>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Protein Xantha-l) Length = 417 Score = 168 bits (426), Expect = 2e-42 Identities = 87/121 (71%), Positives = 87/121 (71%) Frame = +1 Query: 49 MASAMELSLLNPAMHHYGIAAKTASHLPVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 228 MASAMELSLLNPAMHHYGIAAKTASHLPVVP Sbjct: 1 MASAMELSLLNPAMHHYGIAAKTASHLPVVPARRASSGAVRFRVRAAAAAPPAPAAKPGS 60 Query: 229 XXXXXKTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFI 408 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFI Sbjct: 61 PKKRGKTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFI 120 Query: 409 R 411 R Sbjct: 121 R 121
>CRD1_EUPES (Q945B7) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 103 bits (258), Expect = 7e-23 Identities = 47/56 (83%), Positives = 52/56 (92%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K E+NE+LLTPRFYTTDFDEME LFN EINK+LNQ EF+ALLQEFKTDYNQTHF+R Sbjct: 54 KKEINETLLTPRFYTTDFDEMETLFNTEINKKLNQSEFEALLQEFKTDYNQTHFVR 109
>CRD1_ARATH (Q9M591) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) (Copper response defect 1 protein) (Dicarboxylate diiron protein) (AtZIP Length = 409 Score = 101 bits (251), Expect = 5e-22 Identities = 46/56 (82%), Positives = 51/56 (91%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K E+ ESLLTPRFYTTDF+EMEQLFN EINK LN+ EF+ALLQEFKTDYNQTHF+R Sbjct: 58 KKEIQESLLTPRFYTTDFEEMEQLFNTEINKNLNEAEFEALLQEFKTDYNQTHFVR 113
>CRD1_GOSHI (Q6SJV8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 405 Score = 100 bits (248), Expect = 1e-21 Identities = 45/56 (80%), Positives = 50/56 (89%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 KT + E+LLTPRFYTTDFDEME LFN EINK LNQ EF++LLQEFKTDYNQTHF+R Sbjct: 54 KTAIKETLLTPRFYTTDFDEMEALFNTEINKNLNQSEFESLLQEFKTDYNQTHFVR 109
>CTH1_CHLRE (Q9AR22) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) (Copper target homolog 1 protein) Length = 407 Score = 84.3 bits (207), Expect = 6e-17 Identities = 36/56 (64%), Positives = 47/56 (83%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K +E+LLTPRFYTTDFDEME+LF+ E+NK ++ +EF+A+L EFK DYNQ HF+R Sbjct: 56 KVASDETLLTPRFYTTDFDEMERLFSLELNKNMDMEEFEAMLNEFKLDYNQRHFVR 111
>CRD1_CHLRE (Q9LD46) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) (Copper response defect 1 protein) (Copper-response target 1 protein Length = 407 Score = 79.7 bits (195), Expect = 1e-15 Identities = 35/56 (62%), Positives = 43/56 (76%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K E+LLTPRFYTTDFDEMEQLF+ EIN L+ +E +A L EF+ DYN+ HF+R Sbjct: 56 KVAAKETLLTPRFYTTDFDEMEQLFSKEINPNLDMEELNACLNEFRNDYNKVHFVR 111
>ACSF_GRATL (Q6B8U1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 70.1 bits (170), Expect = 1e-12 Identities = 35/56 (62%), Positives = 42/56 (75%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 +T V E+LLTPRFYTTDFDEM +L + N DEF+ALLQEF+ DYN+ HFIR Sbjct: 9 QTPVKETLLTPRFYTTDFDEMSKL-----DISSNIDEFEALLQEFRADYNRQHFIR 59
>ACSF3_ANASP (Q8YRZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 3 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 3) Length = 358 Score = 65.9 bits (159), Expect = 2e-11 Identities = 31/56 (55%), Positives = 41/56 (73%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K E+LLTPRFYTTDFDEM A ++ +N+DE A+L+EF+TDYN+ HF+R Sbjct: 18 KVPAKETLLTPRFYTTDFDEM-----ARMDISVNEDELLAILEEFRTDYNRHHFVR 68
>ACSF1_SYNY3 (P72584) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 358 Score = 64.7 bits (156), Expect = 5e-11 Identities = 30/56 (53%), Positives = 41/56 (73%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 KT E++LTPRFYTTDFDEM A+++ N+DE A+L+EF+ DYN+ HF+R Sbjct: 18 KTPAKETILTPRFYTTDFDEM-----AKMDISPNEDELRAILEEFRVDYNRHHFVR 68
>ACSF_PORPU (P51277) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 60.8 bits (146), Expect = 7e-10 Identities = 29/51 (56%), Positives = 37/51 (72%) Frame = +1 Query: 259 ESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 E+LLTPRFYTTDF+EM A +N N+ +F A+L+EF+ DYN HFIR Sbjct: 14 ETLLTPRFYTTDFEEM-----ASMNISENEQDFFAILEEFRADYNSQHFIR 59
>ACSF_SYNP6 (Q5MZZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 59.7 bits (143), Expect = 2e-09 Identities = 27/56 (48%), Positives = 39/56 (69%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K E++LTPRFYTTDF+ M A+++ N+DE A+L+EF+ DYN+ HF+R Sbjct: 18 KAPAKETILTPRFYTTDFEAM-----AKMDLSPNEDELRAILEEFRADYNRKHFVR 68
>ACSF_CYAME (Q85FX6) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 335 Score = 59.7 bits (143), Expect = 2e-09 Identities = 29/51 (56%), Positives = 40/51 (78%) Frame = +1 Query: 259 ESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 ++LLTPRFYTTDFD+M + +I+K N+ E +A++ EF+ DYNQTHFIR Sbjct: 12 QTLLTPRFYTTDFDQMAKY---DISK--NRAEIEAIVNEFRKDYNQTHFIR 57
>ACSF_SYNPX (Q7U6Y8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 356 Score = 57.8 bits (138), Expect = 6e-09 Identities = 26/56 (46%), Positives = 40/56 (71%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K V +++LTPRFYTTDFD+M A ++ + N+ E +A+ +EF+ DYN+ HF+R Sbjct: 16 KDPVKDTILTPRFYTTDFDDM-----AAMDLRPNEAELEAICEEFRKDYNRHHFVR 66
>ACSF_PROMP (Q7V1M1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 390 Score = 57.0 bits (136), Expect = 1e-08 Identities = 24/56 (42%), Positives = 39/56 (69%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K +++LTP FYTTDF+ ME++ + +N+DE +A+ +EF+ DYN+ HF+R Sbjct: 18 KDIAKDTILTPNFYTTDFEAMEKM-----DLSINEDELEAICEEFRKDYNRHHFVR 68
>ACSF2_SYNY3 (P74134) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 56.6 bits (135), Expect = 1e-08 Identities = 27/56 (48%), Positives = 37/56 (66%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K V E+LLTPRFYTTDFD++ A + L +E +A L+E + DYN+ HF+R Sbjct: 18 KAPVKETLLTPRFYTTDFDKV-----ANLVLTLQDEEIEAALEELRADYNRYHFVR 68
>ACSF_CYACA (Q9TLR8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 354 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/56 (46%), Positives = 38/56 (67%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K + E+LL PRFYTTDFDE+ + + N +E +A++ EF++DYN+ HFIR Sbjct: 11 KKTIKETLLAPRFYTTDFDEI-----SRYDISSNFEEIEAIVNEFRSDYNKKHFIR 61
>ACSF1_SYNEL (Q8DJ05) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 380 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/56 (46%), Positives = 37/56 (66%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K E++LTPRFYTTDF+ M + E N+ E +A+L+EF+ DYN+ HF+R Sbjct: 18 KAPAKETILTPRFYTTDFEAMANMDITE-----NKAELEAILEEFRCDYNRHHFVR 68
>ACSF2_ANASP (Q8YVU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 358 Score = 55.8 bits (133), Expect = 2e-08 Identities = 26/56 (46%), Positives = 37/56 (66%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 K V E+LLTPRFYTTDFD + A ++ N+ E A+++E + DYN+ HF+R Sbjct: 18 KAPVQETLLTPRFYTTDFDAV-----ANLDISANETEIRAIVEELRADYNRHHFVR 68
>ACSF2_SYNEL (Q8DI68) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 2 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2) Length = 354 Score = 53.9 bits (128), Expect = 9e-08 Identities = 24/53 (45%), Positives = 40/53 (75%) Frame = +1 Query: 253 VNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 + E+LLTPRFYTTDF++ +L ++++Q Q++ +A+L E + DYN+ HF+R Sbjct: 17 IRENLLTPRFYTTDFEQAAKL---DLSRQ--QEQLEAMLAEMRADYNRHHFVR 64
>ACSF_GLOVI (Q7NFA1) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 346 Score = 53.5 bits (127), Expect = 1e-07 Identities = 26/56 (46%), Positives = 39/56 (69%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 ++E E+LLTPRFYTTDF+ + A+++ + +F+ALL EF+ DYN+ HF R Sbjct: 13 QSERRETLLTPRFYTTDFEAL-----AKLDISAMEADFEALLAEFQADYNREHFQR 63
>ACSF1_ANASP (Q8YX57) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) Length = 351 Score = 51.6 bits (122), Expect = 4e-07 Identities = 24/56 (42%), Positives = 35/56 (62%) Frame = +1 Query: 244 KTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 KT E++LTPRFYTTDF+ A ++ ++E A+L E + DYN+ HF+R Sbjct: 11 KTPSKETVLTPRFYTTDFETA-----ANLDLSAQENELQAMLAEMRADYNRHHFVR 61
>ACSF_PROMA (Q7VBV0) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 347 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/53 (39%), Positives = 37/53 (69%) Frame = +1 Query: 253 VNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 ++E+LLTPRFYTT+F++ A+ + ++ + +F+A+ +E + DYN HF R Sbjct: 21 LDENLLTPRFYTTEFEKA-----AKTDLEIARKDFEAMFKEMEADYNLKHFDR 68
>ACSF_PROMM (Q7V3Y9) Magnesium-protoporphyrin IX monomethyl ester [oxidative]| cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 349 Score = 46.6 bits (109), Expect = 1e-05 Identities = 21/53 (39%), Positives = 36/53 (67%) Frame = +1 Query: 253 VNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 ++++LLTPRFYTT+FD+ A+ + + + +F+A+ +E + DYN HF R Sbjct: 23 LDDNLLTPRFYTTEFDKA-----AKTDLDIARKDFEAMFKEMEADYNLKHFDR 70
>ACSF_RHOPA (Q6N9J7) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 365 Score = 45.1 bits (105), Expect = 4e-05 Identities = 20/49 (40%), Positives = 34/49 (69%) Frame = +1 Query: 259 ESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHF 405 +++LTPRFYTTD+ M++L + L + E+ A++ E + DYN++HF Sbjct: 31 DTILTPRFYTTDYAAMDKL-----DVSLVRAEWTAMMNELRADYNKSHF 74
>ACSF_RHOGE (Q8VPB5) Aerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.81) (Aerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 358 Score = 40.0 bits (92), Expect = 0.001 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = +1 Query: 262 SLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIR 411 +LL+PRFYTTD+ M + + I + E+DA+L E++ D N HF R Sbjct: 21 TLLSPRFYTTDYAAMNAIDVSSI-----RAEWDAMLAEYEGDNNHDHFQR 65
>JJAZ_MOUSE (Q80U70) Polycomb protein Suz12 (Suppressor of zeste 12 protein| homolog) Length = 741 Score = 31.2 bits (69), Expect = 0.61 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 Query: 180 HAEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEEGELHGG 55 H G G GP+ G GG FGG A V G+ GG Sbjct: 6 HGGGGGGGSGPSAGSG---GGGFGGSAAAVAAAASGGKSGGG 44
>SUZ12_HUMAN (Q15022) Polycomb protein SUZ12 (Suppressor of zeste 12 protein| homolog) (Joined to JAZF1 protein) (Chromatin precipitated E2F target 9 protein) (ChET 9 protein) Length = 739 Score = 30.4 bits (67), Expect = 1.0 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 Query: 180 HAEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEEGELHGG 55 H G G GP+ G GG FGG A V G+ GG Sbjct: 6 HGGGGGGGSGPSAGSG---GGGFGGSAAVAAATASGGKSGGG 44
>UB2Q1_MOUSE (Q7TSS2) Ubiquitin-conjugating enzyme E2 Q1 (EC 6.3.2.19)| (Ubiquitin-protein ligase Q1) (Ubiquitin carrier protein Q1) Length = 422 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 177 AEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEE 73 A A GAG G A G + G GD V +HC + E Sbjct: 76 AGAGGAGAGAAPGPHLPSRGSVPGDPVRIHCNITE 110
>UB2Q1_HUMAN (Q7Z7E8) Ubiquitin-conjugating enzyme E2 Q1 (EC 6.3.2.19)| (Ubiquitin-protein ligase Q1) (Ubiquitin carrier protein Q1) (Protein NICE-5) Length = 422 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 177 AEADGAGRGPACGDNREVGGRFGGDAVVVHCGVEE 73 A A GAG G A G + G GD V +HC + E Sbjct: 76 AGAGGAGAGAAPGPHLPPRGSVPGDPVRIHCNITE 110
>FGD4_HUMAN (Q96M96) FYVE, RhoGEF and PH domain-containing protein 4 (Actin| filament-binding protein frabin) (FGD1-related F-actin-binding protein) (Zinc finger FYVE domain-containing protein 6) Length = 766 Score = 28.9 bits (63), Expect = 3.0 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 256 NESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDA 363 NE LLT R Y D ++Q+F ++ ++ N+ F A Sbjct: 212 NELLLTERAYVNRLDLLDQVFYCKLLEEANRGSFPA 247
>Y081_MYCPN (P75612) Hypothetical ABC transporter ATP-binding protein MG065| homolog (R02_orf465) Length = 465 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 10/48 (20%) Frame = +1 Query: 283 YTTDFDEMEQLFNAEIN----------KQLNQDEFDALLQEFKTDYNQ 396 +TTD E+ Q+ NA +N KQL +D +A+L KT+Y + Sbjct: 16 FTTDAMELRQISNAYLNQAQAYLQKGLKQLKKDYKNAILYTPKTEYKR 63
>GRP1_PETHY (P09789) Glycine-rich cell wall structural protein 1 precursor| Length = 384 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -1 Query: 159 GRGPACGDNREVGGRFGGDA 100 GRGP+ G R GG FGG A Sbjct: 56 GRGPSFGRGRGAGGGFGGGA 75
>CSMD1_MOUSE (Q923L3) CUB and sushi domain-containing protein 1 precursor (CUB and| sushi multiple domains protein 1) Length = 3564 Score = 28.1 bits (61), Expect = 5.2 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 2/82 (2%) Frame = -2 Query: 278 RGVSRDSLTSVLPRFFGEPGFXXXXXXXXXXALTRKRTAPEEARRAGT--TGRWEAVLAA 105 RGV + + LP F G+PG P E R +G T + E + Sbjct: 3140 RGVWKGEVPQCLPVFCGDPG------------------TPAEGRLSGKSFTFKSEVFIQC 3181 Query: 104 MP*WCIAGLRRESSMADAIFRG 39 P + + G R + AD I+ G Sbjct: 3182 KPPFVLVGSSRRTCQADGIWSG 3203
>FANCJ_CHICK (Q3YK19) Fanconi anemia group J protein homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase BRIP1) (Protein FACJ) Length = 1252 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Frame = +3 Query: 3 SSLPFRAVCHSRSSED----GVRHGA 68 +SLP R VCHSRS G HGA Sbjct: 86 ASLPCRCVCHSRSESSEATAGASHGA 111
>YQA2_CAEEL (Q09240) Hypothetical protein C28F5.2| Length = 194 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +1 Query: 325 EINKQLNQDEFDALLQEFKTDYNQT 399 E+ K +++E A LQ+ + DYNQT Sbjct: 166 EMGKMEDEEELHAKLQQLRMDYNQT 190
>CF1A_DROME (P16241) POU-domain protein CF1A (Chorion factor 1A) (CF1-A)| (Ventral veins lacking protein) (Drifter protein) Length = 427 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +1 Query: 31 THAPRKMASAMELSLLNPAMHHYGIAAKTASH-LPVVP 141 T +PR A A E+ + HH+ AA A H LP P Sbjct: 25 TSSPRSAADAGEMKYMQHHHHHHAAAAAAAHHQLPSSP 62
>NORM_RHILO (Q98D15) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 467 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/53 (28%), Positives = 23/53 (43%) Frame = -2 Query: 245 LPRFFGEPGFXXXXXXXXXXALTRKRTAPEEARRAGTTGRWEAVLAAMP*WCI 87 +P FG G L R+R + + RR G W A+L ++P W + Sbjct: 67 MPLIFGL-GLMLATSPMIATELGRRRYSVRDLRRTVRQGLWLAILISIPIWIV 118
>PRC_HAEIN (P45306) Tail-specific protease precursor (EC 3.4.21.102) (Protease| Re) (C-terminal-processing peptidase) Length = 695 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +1 Query: 280 FYTTDFDEMEQLFNAEINKQLNQDEFDA 363 F +D DE+ Q + ++++QLNQ + A Sbjct: 92 FLQSDIDELRQKYGTKLDEQLNQGDLSA 119
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 7/58 (12%) Frame = -1 Query: 168 DGAGRGPACGDNREVGGRF-----GGDAVVVH--CGVEEGELHGGRHLPRSVSDRQRG 16 D AG G + +R+ G R GG A H GE HG RH + S R G Sbjct: 3260 DRAGHGHSADRSRQSGTRHAETSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHSG 3317
>EPL1_CANGA (Q6FLZ0) Enhancer of polycomb-like protein 1| Length = 821 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +1 Query: 292 DFDEMEQLFNAEINKQLNQDEFDALLQEFKT 384 D D +E N + +LN+DEF++L F+T Sbjct: 158 DDDFLENSLNKNSDLKLNEDEFESLCSAFET 188 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.129 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,063,240 Number of Sequences: 219361 Number of extensions: 545886 Number of successful extensions: 2403 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 2259 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2381 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
